Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1062150 | XP_039683995.1 | 96.010 | 777 | 23 | 5 | 1 | 776 | 1 | 770 | 0.0 | 1541 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1062150 | sp|Q01593|ABI3_ARATH | 46.479 | 781 | 281 | 29 | 19 | 763 | 32 | 711 | 2.70e-161 | 488 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1062150 | A0A072U0Z8 | 96.010 | 777 | 23 | 5 | 1 | 776 | 1 | 770 | 0.0 | 1541 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1062150 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1062150 | MtrunA17_Chr7g0237841 | 96.010 | 777 | 23 | 5 | 1 | 776 | 1 | 770 | 0.0 | 1541 |
| Msa1062150 | MtrunA17_Chr7g0251891 | 50.847 | 118 | 58 | 0 | 623 | 740 | 11 | 128 | 7.78e-34 | 129 |
| Msa1062150 | MtrunA17_Chr4g0047031 | 44.211 | 95 | 52 | 1 | 623 | 717 | 172 | 265 | 1.32e-19 | 91.3 |
| Msa1062150 | MtrunA17_Chr7g0244871 | 40.909 | 88 | 51 | 1 | 628 | 715 | 12 | 98 | 3.45e-18 | 80.5 |
| Msa1062150 | MtrunA17_Chr3g0107701 | 37.255 | 102 | 62 | 2 | 628 | 729 | 338 | 437 | 2.28e-16 | 84.0 |
| Msa1062150 | MtrunA17_Chr2g0281191 | 38.235 | 102 | 61 | 2 | 628 | 729 | 352 | 451 | 1.29e-15 | 81.3 |
| Msa1062150 | MtrunA17_Chr5g0432721 | 38.235 | 102 | 61 | 2 | 628 | 729 | 321 | 420 | 2.08e-15 | 80.5 |
| Msa1062150 | MtrunA17_Chr4g0012861 | 35.714 | 98 | 62 | 1 | 628 | 725 | 314 | 410 | 4.25e-15 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1062150 | AT3G24650.1 | 46.479 | 781 | 281 | 29 | 19 | 763 | 32 | 711 | 2.74e-162 | 488 |
| Msa1062150 | AT3G26790.1 | 50.000 | 146 | 59 | 3 | 589 | 734 | 66 | 197 | 2.49e-38 | 145 |
| Msa1062150 | AT1G28300.1 | 49.587 | 121 | 60 | 1 | 623 | 742 | 165 | 285 | 4.71e-32 | 129 |
| Msa1062150 | AT2G30470.1 | 40.566 | 106 | 61 | 2 | 624 | 729 | 290 | 393 | 1.94e-17 | 87.4 |
| Msa1062150 | AT4G32010.2 | 37.755 | 98 | 60 | 1 | 628 | 725 | 281 | 377 | 6.54e-16 | 82.8 |
| Msa1062150 | AT4G32010.1 | 37.755 | 98 | 60 | 1 | 628 | 725 | 285 | 381 | 6.73e-16 | 82.4 |
| Msa1062150 | AT4G21550.2 | 37.255 | 102 | 60 | 3 | 628 | 729 | 327 | 424 | 1.25e-14 | 77.8 |
| Msa1062150 | AT4G21550.1 | 37.255 | 102 | 60 | 3 | 628 | 729 | 327 | 424 | 1.75e-14 | 77.8 |
| Msa1062150 | AT4G21550.3 | 37.255 | 102 | 60 | 3 | 628 | 729 | 327 | 424 | 2.02e-14 | 77.4 |
Find 155 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCTCATGGTATGAATTT+TGG | 0.145459 | 7_2:-52746664 | Msa1062150:CDS |
| CCATCTCTTGCCTCCAATTC+TGG | 0.191237 | 7_2:+52745629 | None:intergenic |
| GAAATTTAGCAGAAGAAAAT+TGG | 0.230877 | 7_2:-52748022 | Msa1062150:CDS |
| GAAACAGAACAAGTTGGTTT+TGG | 0.246821 | 7_2:-52748044 | Msa1062150:CDS |
| TTGAAACACGCGTTCGATTC+AGG | 0.254211 | 7_2:+52746943 | None:intergenic |
| CATGGATGATGTTAACATTA+TGG | 0.261818 | 7_2:-52747571 | Msa1062150:CDS |
| TCACAATGAAATCTCCTTCT+TGG | 0.299532 | 7_2:+52745265 | None:intergenic |
| TTTGTCATCAACTGCTTCTA+TGG | 0.302150 | 7_2:-52747664 | Msa1062150:CDS |
| CAAATGTGTTCGTTGTGTTT+TGG | 0.311258 | 7_2:+52746968 | None:intergenic |
| TTCTTCTTCTGCAGCATCTT+GGG | 0.314345 | 7_2:-52747790 | Msa1062150:CDS |
| ACATTGGAACTTCTCGAGTT+TGG | 0.314913 | 7_2:-52745586 | Msa1062150:CDS |
| AATTCTTATCAGTTGTTTCC+TGG | 0.316637 | 7_2:-52746622 | Msa1062150:CDS |
| GAGTTTGGAATATGCGTTAC+AGG | 0.322554 | 7_2:-52745571 | Msa1062150:intron |
| TTTGTGTGTGATGGTGTAAA+TGG | 0.322693 | 7_2:-52747321 | Msa1062150:CDS |
| AGAAACACATTTGCCAGAAT+TGG | 0.333835 | 7_2:-52745642 | Msa1062150:CDS |
| GTTAACATTATGGATACTTT+TGG | 0.334842 | 7_2:-52747561 | Msa1062150:CDS |
| TGTTTCCTGGTCCTGGTGAT+AGG | 0.335577 | 7_2:-52746609 | Msa1062150:CDS |
| GTTCTTCTTCTGCAGCATCT+TGG | 0.342874 | 7_2:-52747791 | Msa1062150:CDS |
| TATCAGTTGTTTCCTGGTCC+TGG | 0.347158 | 7_2:-52746616 | Msa1062150:CDS |
| TTCCTTGGCACCTGTTGTTC+CGG | 0.349548 | 7_2:-52746347 | Msa1062150:CDS |
| TGTTGAAGCTTATTCTTGAA+TGG | 0.366685 | 7_2:-52747104 | Msa1062150:CDS |
| GCAAAGTGATGTGGGAAGTC+TGG | 0.373169 | 7_2:-52745782 | Msa1062150:CDS |
| TGATGAAGAAAACCCTTTAG+TGG | 0.375000 | 7_2:-52747481 | Msa1062150:CDS |
| TTGTGTGTGATGGTGTAAAT+GGG | 0.375240 | 7_2:-52747320 | Msa1062150:CDS |
| GTAGGGCGGTCACGGTCTAC+TGG | 0.390870 | 7_2:+52746307 | None:intergenic |
| CGATGATAGTGAATGATGAT+AGG | 0.395669 | 7_2:-52747395 | Msa1062150:CDS |
| GTCGGCTCAGCCGGAACAAC+AGG | 0.395714 | 7_2:+52746337 | None:intergenic |
| TCTGATCCACTTGCAAGATT+AGG | 0.399738 | 7_2:-52746466 | Msa1062150:CDS |
| GAAACAGAACCATTTGTGTA+AGG | 0.406123 | 7_2:+52746826 | None:intergenic |
| ACAAATGATTGATTGTAGTT+TGG | 0.412145 | 7_2:+52746709 | None:intergenic |
| TGTTGGAATCAAATCATTCA+TGG | 0.419898 | 7_2:-52746756 | Msa1062150:CDS |
| TCGAATAATGATGTTGTTGT+TGG | 0.421700 | 7_2:-52747606 | Msa1062150:CDS |
| GTTGAAGCTTATTCTTGAAT+GGG | 0.421780 | 7_2:-52747103 | Msa1062150:CDS |
| CTCATGCAAATCCAGGTAAC+TGG | 0.422437 | 7_2:-52746405 | Msa1062150:CDS |
| AACCTTGAATATTCTGATGA+TGG | 0.426625 | 7_2:+52746488 | None:intergenic |
| TTTGATCTAGCCATGATGTT+TGG | 0.427680 | 7_2:+52746920 | None:intergenic |
| GGAGGCTGTGTCGGCTCAGC+CGG | 0.428059 | 7_2:+52746328 | None:intergenic |
| GATGACATGCATGGAAAATC+AGG | 0.429831 | 7_2:+52747906 | None:intergenic |
| CAAAGTGATGTGGGAAGTCT+GGG | 0.435116 | 7_2:-52745781 | Msa1062150:CDS |
| TTTGAGGTTCCTTCTACAAA+AGG | 0.435498 | 7_2:-52745812 | Msa1062150:CDS |
| AGGTGGGACAGCAGCTTCCT+TGG | 0.437818 | 7_2:-52746362 | Msa1062150:CDS |
| TGTTGGTGGTGGTGATTGCA+TGG | 0.439533 | 7_2:-52747589 | Msa1062150:CDS |
| TGACCATGATGATAATCTAA+TGG | 0.440958 | 7_2:+52747699 | None:intergenic |
| AACCATCATCAGAATATTCA+AGG | 0.441107 | 7_2:-52746490 | Msa1062150:CDS |
| AGATTAGGTGGTGGAAAAGA+AGG | 0.441852 | 7_2:-52747138 | Msa1062150:CDS |
| GTTGCTGATCCTTACACAAA+TGG | 0.448875 | 7_2:-52746835 | Msa1062150:CDS |
| ATCCAGGTAACTGGATGTAT+TGG | 0.449670 | 7_2:-52746396 | Msa1062150:CDS |
| CTTGTGTGAAATCCACTAAA+GGG | 0.453109 | 7_2:+52747469 | None:intergenic |
| CCAATGGTTGGAGTTGGAGT+TGG | 0.454100 | 7_2:-52746862 | Msa1062150:CDS |
| CAACAGCAGCAACAAGATCT+TGG | 0.454650 | 7_2:-52747633 | Msa1062150:CDS |
| CTAGTCATCTTCAAAACAAA+AGG | 0.455119 | 7_2:-52747074 | Msa1062150:CDS |
| GCAGTTGATGACAAAGTTGT+TGG | 0.458355 | 7_2:+52747672 | None:intergenic |
| GAACTCTGTGTCTGCATGGT+AGG | 0.458673 | 7_2:+52746289 | None:intergenic |
| TTGCTGCATTATTCCCATGC+TGG | 0.461065 | 7_2:+52744709 | None:intergenic |
| TCTGCATGGTAGGGCGGTCA+CGG | 0.463598 | 7_2:+52746299 | None:intergenic |
| TGTTGAGGAACAAGATTTGA+AGG | 0.464089 | 7_2:+52747018 | None:intergenic |
| TTAGTAGCAGCAGGTTGGTA+AGG | 0.468267 | 7_2:+52746790 | None:intergenic |
| GGAACTGCAGTGGATAATAA+TGG | 0.468390 | 7_2:-52744678 | Msa1062150:CDS |
| GAAAGTGCTGCTAAGAGATT+AGG | 0.469707 | 7_2:-52747153 | Msa1062150:CDS |
| AATGATGTTGTTGTTGGTGG+TGG | 0.475401 | 7_2:-52747600 | Msa1062150:CDS |
| TGTAAGTGATGAAATGAGTA+TGG | 0.477564 | 7_2:-52747259 | Msa1062150:CDS |
| AATAATGATGTTGTTGTTGG+TGG | 0.478444 | 7_2:-52747603 | Msa1062150:CDS |
| GGTGATAGGTTGATGAGGTT+AGG | 0.481801 | 7_2:-52746595 | Msa1062150:CDS |
| GCGTCTCGGCGAATGATTTG+AGG | 0.483971 | 7_2:-52747203 | Msa1062150:CDS |
| AACACATTTGCCAGAATTGG+AGG | 0.485525 | 7_2:-52745639 | Msa1062150:CDS |
| GGCGGTTTATGTCTCATCAT+AGG | 0.485732 | 7_2:-52746525 | Msa1062150:CDS |
| TCCTCGATATTCACTTGTTG+CGG | 0.491769 | 7_2:+52747363 | None:intergenic |
| TCCACAAACCTGTCTCCTAT+CGG | 0.498147 | 7_2:+52746246 | None:intergenic |
| CCACAAACCTGTCTCCTATC+GGG | 0.499467 | 7_2:+52746247 | None:intergenic |
| TTAGATCTTGTTATGGAGTG+TGG | 0.500339 | 7_2:-52748095 | None:intergenic |
| GGAAGCCTGAAAAGAATTTG+AGG | 0.501676 | 7_2:-52745828 | Msa1062150:CDS |
| TCTTGTGTGAAATCCACTAA+AGG | 0.501764 | 7_2:+52747468 | None:intergenic |
| TCACAACCAATGGTTGGAGT+TGG | 0.514632 | 7_2:-52746868 | Msa1062150:CDS |
| GTAAATGGGGAGAGTATTCA+AGG | 0.514685 | 7_2:-52747306 | Msa1062150:CDS |
| CCAGAATTGGAGGCAAGAGA+TGG | 0.521085 | 7_2:-52745629 | Msa1062150:CDS |
| TCGATTACAATGGAAGACAT+TGG | 0.521875 | 7_2:-52745602 | Msa1062150:CDS |
| TGCCAATACATCCAGTTACC+TGG | 0.522443 | 7_2:+52746394 | None:intergenic |
| GATGATAGTGAATGATGATA+GGG | 0.524414 | 7_2:-52747394 | Msa1062150:CDS |
| TTTAGATCTGCATGCAAAGT+TGG | 0.524550 | 7_2:-52748072 | Msa1062150:CDS |
| CGGTCTACTGGAGGCTGTGT+CGG | 0.525844 | 7_2:+52746319 | None:intergenic |
| TGATAGTCATTAGTAGCAGC+AGG | 0.526692 | 7_2:+52746781 | None:intergenic |
| CATCCATTAGATTATCATCA+TGG | 0.529410 | 7_2:-52747702 | Msa1062150:CDS |
| GATTAGGTGGTGGAAAAGAA+GGG | 0.531409 | 7_2:-52747137 | Msa1062150:CDS |
| AACTCTGTGTCTGCATGGTA+GGG | 0.531617 | 7_2:+52746290 | None:intergenic |
| AATAATGCAGCAAATTCAGC+TGG | 0.533401 | 7_2:-52744699 | Msa1062150:CDS |
| GTTGGAATCAAATCATTCAT+GGG | 0.534566 | 7_2:-52746755 | Msa1062150:CDS |
| TGCACCAATGTTGCTGCTGG+TGG | 0.534906 | 7_2:-52746430 | Msa1062150:CDS |
| AGAAGAGGATGGCTCGGCAA+CGG | 0.537506 | 7_2:-52746546 | Msa1062150:CDS |
| AAGTGCACCCGATAGGAGAC+AGG | 0.539885 | 7_2:-52746254 | Msa1062150:intron |
| GTGAATGAAACAGAACAAGT+TGG | 0.541250 | 7_2:-52748050 | Msa1062150:CDS |
| CTATCATCATTCACTATCAT+CGG | 0.544747 | 7_2:+52747396 | None:intergenic |
| GGTGGTTCTCATGCAAATCC+AGG | 0.547601 | 7_2:-52746412 | Msa1062150:CDS |
| ACTAGCAGAGGAAGAAGAAG+AGG | 0.549666 | 7_2:+52747812 | None:intergenic |
| ATGCATGGAAAATCAGGTAA+AGG | 0.554838 | 7_2:+52747912 | None:intergenic |
| TAGTAGCAGCAGGTTGGTAA+GGG | 0.556194 | 7_2:+52746791 | None:intergenic |
| ATTGGTTGTGAAAATTGTTG+TGG | 0.556322 | 7_2:+52746880 | None:intergenic |
| ATTGGCCAAACAACAAAAGC+AGG | 0.559048 | 7_2:-52745420 | Msa1062150:CDS |
| TTTGTGATACAGATGATAAG+AGG | 0.559171 | 7_2:-52744798 | Msa1062150:intron |
| GCAGACACAGAGTTCTCACC+AGG | 0.559551 | 7_2:-52746281 | Msa1062150:CDS |
| GATCCACTTGCAAGATTAGG+TGG | 0.564399 | 7_2:-52746463 | Msa1062150:CDS |
| AGCCGGAACAACAGGTGCCA+AGG | 0.565713 | 7_2:+52746345 | None:intergenic |
| GTGAGAACTCTGTGTCTGCA+TGG | 0.567470 | 7_2:+52746285 | None:intergenic |
| CAAAAGAAGCTAGAAAGAAG+AGG | 0.568012 | 7_2:-52746561 | Msa1062150:CDS |
| GCAACAAGTTCAAGTGCAAG+AGG | 0.568536 | 7_2:-52747445 | Msa1062150:CDS |
| AGATGGAATTTCGATTACAA+TGG | 0.569089 | 7_2:-52745612 | Msa1062150:CDS |
| TCTTGAAACTGTTGTTGTTG+AGG | 0.572652 | 7_2:+52747003 | None:intergenic |
| GGGCGGTCACGGTCTACTGG+AGG | 0.573786 | 7_2:+52746310 | None:intergenic |
| CAACAAGTTCAAGTGCAAGA+GGG | 0.577061 | 7_2:-52747444 | Msa1062150:CDS |
| CCACCACCTAATCTTGCAAG+TGG | 0.579510 | 7_2:+52746460 | None:intergenic |
| CTAGAAAGAAGAGGATGGCT+CGG | 0.580461 | 7_2:-52746552 | Msa1062150:CDS |
| AATAATGTGCTACAACCTCA+TGG | 0.584003 | 7_2:-52746676 | Msa1062150:CDS |
| AGAACCACCAGCAGCAACAT+TGG | 0.585844 | 7_2:+52746426 | None:intergenic |
| AATACTACAAATGATCAAGA+TGG | 0.586104 | 7_2:-52747993 | Msa1062150:CDS |
| AATTGCACCAATGTTGCTGC+TGG | 0.589434 | 7_2:-52746433 | Msa1062150:CDS |
| TGTGTGTGATGGTGTAAATG+GGG | 0.589836 | 7_2:-52747319 | Msa1062150:CDS |
| AAAGCTAATGGACTCCAAGA+AGG | 0.591042 | 7_2:-52745279 | Msa1062150:CDS |
| CCAACTCCAACTCCAACCAT+TGG | 0.593836 | 7_2:+52746862 | None:intergenic |
| TACTAATGACTATCACATGT+TGG | 0.596503 | 7_2:-52746773 | Msa1062150:CDS |
| TGTTGTTGAAGTACATGCAA+TGG | 0.597980 | 7_2:+52747845 | None:intergenic |
| CGTGTTTCAACCAAACATCA+TGG | 0.599957 | 7_2:-52746930 | Msa1062150:CDS |
| CATGGAAAATCAGGTAAAGG+AGG | 0.601465 | 7_2:+52747915 | None:intergenic |
| AACCTCATCAACCTATCACC+AGG | 0.601661 | 7_2:+52746598 | None:intergenic |
| GATGTTGAAGTAGATCATCA+AGG | 0.604610 | 7_2:-52747753 | Msa1062150:CDS |
| GATGAATTAGTTGCATGTGA+TGG | 0.608790 | 7_2:-52747282 | Msa1062150:CDS |
| GTTGATGACAAAGTTGTTGG+AGG | 0.610564 | 7_2:+52747675 | None:intergenic |
| AGAAGCTAGAAAGAAGAGGA+TGG | 0.610747 | 7_2:-52746557 | Msa1062150:CDS |
| AGGGTCGAAGTGCACCCGAT+AGG | 0.612569 | 7_2:-52746261 | Msa1062150:CDS |
| AACAAGTTCAAGTGCAAGAG+GGG | 0.612587 | 7_2:-52747443 | Msa1062150:CDS |
| AGAGGATGGCTCGGCAACGG+CGG | 0.616260 | 7_2:-52746543 | Msa1062150:CDS |
| GGTTGTGAAAATTGTTGTGG+AGG | 0.618026 | 7_2:+52746883 | None:intergenic |
| ATGTATTGGCAGACTATGAC+AGG | 0.620175 | 7_2:-52746382 | Msa1062150:CDS |
| ATCGAACAAAGATAGCGTCT+CGG | 0.631080 | 7_2:-52747217 | Msa1062150:CDS |
| TCTGTGTCTGCATGGTAGGG+CGG | 0.631104 | 7_2:+52746293 | None:intergenic |
| AGTCATTAGTAGCAGCAGGT+TGG | 0.632190 | 7_2:+52746785 | None:intergenic |
| ATCAACCTATCACCAGGACC+AGG | 0.632824 | 7_2:+52746604 | None:intergenic |
| GAGGATGATGATGACATGCA+TGG | 0.637958 | 7_2:+52747897 | None:intergenic |
| TGTTGAAGATGATGAAGATG+AGG | 0.638543 | 7_2:+52747878 | None:intergenic |
| GTTAAAGTGAGGCAGCAACA+AGG | 0.639002 | 7_2:-52744774 | Msa1062150:CDS |
| AGTGCTGCTAAGAGATTAGG+TGG | 0.639649 | 7_2:-52747150 | Msa1062150:CDS |
| TGTTGTGGAGGTACAATGAG+AGG | 0.642005 | 7_2:+52746895 | None:intergenic |
| TGCAGAAGAAGAACTAGCAG+AGG | 0.649485 | 7_2:+52747800 | None:intergenic |
| TGATAAGAGGAGTTAAAGTG+AGG | 0.652929 | 7_2:-52744785 | Msa1062150:CDS |
| AAATTCAGCTGGAACTGCAG+TGG | 0.653260 | 7_2:-52744688 | Msa1062150:CDS |
| GTCCTGGTGATAGGTTGATG+AGG | 0.656286 | 7_2:-52746600 | Msa1062150:CDS |
| ATGTATTTGCTAGAGAACAC+TGG | 0.658087 | 7_2:-52745397 | Msa1062150:intron |
| TATTGGCAGACTATGACAGG+TGG | 0.659210 | 7_2:-52746379 | Msa1062150:CDS |
| GCTGCTAAGAGATTAGGTGG+TGG | 0.661001 | 7_2:-52747147 | Msa1062150:CDS |
| ATTGGCAGACTATGACAGGT+GGG | 0.666700 | 7_2:-52746378 | Msa1062150:CDS |
| CCTCCAAAATTCATACCATG+AGG | 0.677157 | 7_2:+52746661 | None:intergenic |
| TTGGAATCAAATCATTCATG+GGG | 0.679978 | 7_2:-52746754 | Msa1062150:CDS |
| CCACTTGCAAGATTAGGTGG+TGG | 0.698327 | 7_2:-52746460 | Msa1062150:CDS |
| ATATATTCTGATGTGAAGTG+TGG | 0.700022 | 7_2:-52745243 | Msa1062150:CDS |
| ACCGCAACAAGTGAATATCG+AGG | 0.707077 | 7_2:-52747364 | Msa1062150:CDS |
| AAAGTGATGTGGGAAGTCTG+GGG | 0.734540 | 7_2:-52745780 | Msa1062150:CDS |
| CAGACACAGAGTTCTCACCA+GGG | 0.787957 | 7_2:-52746280 | Msa1062150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAACTTAATTTTCA+TGG | - | chr7_2:52747543-52747562 | Msa1062150:CDS | 10.0% |
| !!! | TTTGTATAAGTTTTAAACTA+TGG | - | chr7_2:52746623-52746642 | Msa1062150:CDS | 15.0% |
| !!! | AGAAAATGAATAATTACTTT+TGG | + | chr7_2:52746988-52747007 | None:intergenic | 15.0% |
| !!! | TGTATTCATTTTCATTTTAT+AGG | - | chr7_2:52747418-52747437 | Msa1062150:CDS | 15.0% |
| !! | AAAAAAAACATTATAAGAGA+AGG | + | chr7_2:52747527-52747546 | None:intergenic | 15.0% |
| !! | AGAATGTAAAATATGAAAAT+CGG | + | chr7_2:52747696-52747715 | None:intergenic | 15.0% |
| !! | TATAAAGTTTGAGAATTAAT+TGG | - | chr7_2:52747898-52747917 | Msa1062150:CDS | 15.0% |
| !!! | TAACTTAATTTTCATGGATT+TGG | - | chr7_2:52747549-52747568 | Msa1062150:CDS | 20.0% |
| !! | GTTTAATATTGCAATTTAGA+CGG | + | chr7_2:52747848-52747867 | None:intergenic | 20.0% |
| ! | GAAATTTAGCAGAAGAAAAT+TGG | - | chr7_2:52744708-52744727 | Msa1062150:CDS | 25.0% |
| ! | AATACTACAAATGATCAAGA+TGG | - | chr7_2:52744737-52744756 | Msa1062150:CDS | 25.0% |
| !! | GTTAACATTATGGATACTTT+TGG | - | chr7_2:52745169-52745188 | Msa1062150:intron | 25.0% |
| ! | ACAAATGATTGATTGTAGTT+TGG | + | chr7_2:52746024-52746043 | None:intergenic | 25.0% |
| !! | GTCACACATTTTTAATAATC+TGG | + | chr7_2:52746823-52746842 | None:intergenic | 25.0% |
| !!! | TGTTGATGTTTTTGATTGAT+AGG | - | chr7_2:52746876-52746895 | Msa1062150:CDS | 25.0% |
| !!! | GTTGATGTTTTTGATTGATA+GGG | - | chr7_2:52746877-52746896 | Msa1062150:CDS | 25.0% |
| !!! | TCTTTTCGATTATTTCTTCT+TGG | - | chr7_2:52747277-52747296 | Msa1062150:CDS | 25.0% |
| ! | GAGTTATTCTTCTTATTCAT+TGG | - | chr7_2:52747357-52747376 | Msa1062150:CDS | 25.0% |
| ! | TCACAATTCAATTAGTTGAA+CGG | + | chr7_2:52747643-52747662 | None:intergenic | 25.0% |
| ! | AAAGTTTGAGAATTAATTGG+TGG | - | chr7_2:52747901-52747920 | Msa1062150:CDS | 25.0% |
| ! | AAGTTTGAGAATTAATTGGT+GGG | - | chr7_2:52747902-52747921 | Msa1062150:CDS | 25.0% |
| AGTAACATGCATCAAAAACA+TGG | - | chr7_2:52745004-52745023 | Msa1062150:intron | 30.0% | |
| CATCCATTAGATTATCATCA+TGG | - | chr7_2:52745028-52745047 | Msa1062150:intron | 30.0% | |
| TGACCATGATGATAATCTAA+TGG | + | chr7_2:52745034-52745053 | None:intergenic | 30.0% | |
| TCGAATAATGATGTTGTTGT+TGG | - | chr7_2:52745124-52745143 | Msa1062150:intron | 30.0% | |
| ! | AATAATGATGTTGTTGTTGG+TGG | - | chr7_2:52745127-52745146 | Msa1062150:intron | 30.0% |
| CATGGATGATGTTAACATTA+TGG | - | chr7_2:52745159-52745178 | Msa1062150:intron | 30.0% | |
| !! | TATGGATACTTTTGGTTACA+TGG | - | chr7_2:52745177-52745196 | Msa1062150:intron | 30.0% |
| !! | CATTTTGAAAAATCGAAGCA+GGG | + | chr7_2:52745231-52745250 | None:intergenic | 30.0% |
| !! | TCATTTTGAAAAATCGAAGC+AGG | + | chr7_2:52745232-52745251 | None:intergenic | 30.0% |
| CTATCATCATTCACTATCAT+CGG | + | chr7_2:52745337-52745356 | None:intergenic | 30.0% | |
| ! | GATGATAGTGAATGATGATA+GGG | - | chr7_2:52745336-52745355 | Msa1062150:intron | 30.0% |
| TGTAAGTGATGAAATGAGTA+TGG | - | chr7_2:52745471-52745490 | Msa1062150:intron | 30.0% | |
| ! | TGAAATGAGTATGGTTTTCT+TGG | - | chr7_2:52745480-52745499 | Msa1062150:intron | 30.0% |
| TGTTGAAGCTTATTCTTGAA+TGG | - | chr7_2:52745626-52745645 | Msa1062150:CDS | 30.0% | |
| GTTGAAGCTTATTCTTGAAT+GGG | - | chr7_2:52745627-52745646 | Msa1062150:CDS | 30.0% | |
| CTAGTCATCTTCAAAACAAA+AGG | - | chr7_2:52745656-52745675 | Msa1062150:intron | 30.0% | |
| ATTGGTTGTGAAAATTGTTG+TGG | + | chr7_2:52745853-52745872 | None:intergenic | 30.0% | |
| ! | ACAACAATTTTCACAACCAA+TGG | - | chr7_2:52745852-52745871 | Msa1062150:intron | 30.0% |
| TACTAATGACTATCACATGT+TGG | - | chr7_2:52745957-52745976 | Msa1062150:intron | 30.0% | |
| TGTTGGAATCAAATCATTCA+TGG | - | chr7_2:52745974-52745993 | Msa1062150:intron | 30.0% | |
| GTTGGAATCAAATCATTCAT+GGG | - | chr7_2:52745975-52745994 | Msa1062150:intron | 30.0% | |
| TTGGAATCAAATCATTCATG+GGG | - | chr7_2:52745976-52745995 | Msa1062150:intron | 30.0% | |
| ! | AATTCTTATCAGTTGTTTCC+TGG | - | chr7_2:52746108-52746127 | Msa1062150:intron | 30.0% |
| AACCATCATCAGAATATTCA+AGG | - | chr7_2:52746240-52746259 | Msa1062150:intron | 30.0% | |
| AACCTTGAATATTCTGATGA+TGG | + | chr7_2:52746245-52746264 | None:intergenic | 30.0% | |
| !!! | CTGCAATATAATGGTTTTAG+AGG | - | chr7_2:52746665-52746684 | Msa1062150:CDS | 30.0% |
| GATAAATATGACCACAATTG+TGG | + | chr7_2:52746711-52746730 | None:intergenic | 30.0% | |
| CATATTTATCCATTTGTCTG+CGG | - | chr7_2:52746721-52746740 | Msa1062150:CDS | 30.0% | |
| ATAATTGATCGATCGGATAA+TGG | + | chr7_2:52746795-52746814 | None:intergenic | 30.0% | |
| GGCAATTATAATTGATCGAT+CGG | + | chr7_2:52746802-52746821 | None:intergenic | 30.0% | |
| !! | ATGTTTTTGATTGATAGGGT+TGG | - | chr7_2:52746881-52746900 | Msa1062150:CDS | 30.0% |
| ATTGCAAAAACATCAGAAAG+AGG | - | chr7_2:52747064-52747083 | Msa1062150:CDS | 30.0% | |
| AGATGGAATTTCGATTACAA+TGG | - | chr7_2:52747118-52747137 | Msa1062150:CDS | 30.0% | |
| !! | TCTTCTTATTCATTGGTCTT+TGG | - | chr7_2:52747364-52747383 | Msa1062150:CDS | 30.0% |
| ATATATTCTGATGTGAAGTG+TGG | - | chr7_2:52747487-52747506 | Msa1062150:CDS | 30.0% | |
| !!! | TGGTCTGGTTTTTAAAACTT+TGG | + | chr7_2:52747612-52747631 | None:intergenic | 30.0% |
| CACAATTCAATTAGTTGAAC+GGG | + | chr7_2:52747642-52747661 | None:intergenic | 30.0% | |
| CTAATTGAATTGTGAATCCT+CGG | - | chr7_2:52747648-52747667 | Msa1062150:CDS | 30.0% | |
| TAATTGAATTGTGAATCCTC+GGG | - | chr7_2:52747649-52747668 | Msa1062150:CDS | 30.0% | |
| AATATTGCAATTTAGACGGT+TGG | + | chr7_2:52747844-52747863 | None:intergenic | 30.0% | |
| TTTGTGATACAGATGATAAG+AGG | - | chr7_2:52747932-52747951 | Msa1062150:CDS | 30.0% | |
| TTTAGATCTGCATGCAAAGT+TGG | - | chr7_2:52744658-52744677 | Msa1062150:CDS | 35.0% | |
| GTGAATGAAACAGAACAAGT+TGG | - | chr7_2:52744680-52744699 | Msa1062150:CDS | 35.0% | |
| !!! | GAAACAGAACAAGTTGGTTT+TGG | - | chr7_2:52744686-52744705 | Msa1062150:CDS | 35.0% |
| ! | GATCAAGATGGTGATCTTTT+AGG | - | chr7_2:52744749-52744768 | Msa1062150:CDS | 35.0% |
| ATGCATGGAAAATCAGGTAA+AGG | + | chr7_2:52744821-52744840 | None:intergenic | 35.0% | |
| TGTTGAAGATGATGAAGATG+AGG | + | chr7_2:52744855-52744874 | None:intergenic | 35.0% | |
| ! | GTACATGCAATGGTTTTCAA+TGG | + | chr7_2:52744878-52744897 | None:intergenic | 35.0% |
| TGTTGTTGAAGTACATGCAA+TGG | + | chr7_2:52744888-52744907 | None:intergenic | 35.0% | |
| GATGTTGAAGTAGATCATCA+AGG | - | chr7_2:52744977-52744996 | Msa1062150:intron | 35.0% | |
| TTTGTCATCAACTGCTTCTA+TGG | - | chr7_2:52745066-52745085 | Msa1062150:intron | 35.0% | |
| TGATGAAGAAAACCCTTTAG+TGG | - | chr7_2:52745249-52745268 | Msa1062150:CDS | 35.0% | |
| CTTGTGTGAAATCCACTAAA+GGG | + | chr7_2:52745264-52745283 | None:intergenic | 35.0% | |
| TCTTGTGTGAAATCCACTAA+AGG | + | chr7_2:52745265-52745284 | None:intergenic | 35.0% | |
| ! | CGATGATAGTGAATGATGAT+AGG | - | chr7_2:52745335-52745354 | Msa1062150:intron | 35.0% |
| ! | TTTGTGTGTGATGGTGTAAA+TGG | - | chr7_2:52745409-52745428 | Msa1062150:CDS | 35.0% |
| ! | TTGTGTGTGATGGTGTAAAT+GGG | - | chr7_2:52745410-52745429 | Msa1062150:CDS | 35.0% |
| GATGAATTAGTTGCATGTGA+TGG | - | chr7_2:52745448-52745467 | Msa1062150:intron | 35.0% | |
| TGTTGAGGAACAAGATTTGA+AGG | + | chr7_2:52745715-52745734 | None:intergenic | 35.0% | |
| ! | TCTTGAAACTGTTGTTGTTG+AGG | + | chr7_2:52745730-52745749 | None:intergenic | 35.0% |
| ! | CAAATGTGTTCGTTGTGTTT+TGG | + | chr7_2:52745765-52745784 | None:intergenic | 35.0% |
| TTTGATCTAGCCATGATGTT+TGG | + | chr7_2:52745813-52745832 | None:intergenic | 35.0% | |
| ! | CAATTTTCACAACCAATGGT+TGG | - | chr7_2:52745856-52745875 | Msa1062150:intron | 35.0% |
| GAAACAGAACCATTTGTGTA+AGG | + | chr7_2:52745907-52745926 | None:intergenic | 35.0% | |
| AATAATGTGCTACAACCTCA+TGG | - | chr7_2:52746054-52746073 | Msa1062150:intron | 35.0% | |
| ! | CAACCTCATGGTATGAATTT+TGG | - | chr7_2:52746066-52746085 | Msa1062150:intron | 35.0% |
| !! | GGTATGAATTTTGGAGGTTA+TGG | - | chr7_2:52746075-52746094 | Msa1062150:intron | 35.0% |
| CAAAAGAAGCTAGAAAGAAG+AGG | - | chr7_2:52746169-52746188 | Msa1062150:intron | 35.0% | |
| TTATATTGCAGCCACAATTG+TGG | + | chr7_2:52746656-52746675 | None:intergenic | 35.0% | |
| CAATTGTGGCTGCAATATAA+TGG | - | chr7_2:52746656-52746675 | Msa1062150:CDS | 35.0% | |
| ! | AGGAACCTCAAATTCTTTTC+AGG | + | chr7_2:52746910-52746929 | None:intergenic | 35.0% |
| ! | TTTGAGGTTCCTTCTACAAA+AGG | - | chr7_2:52746918-52746937 | Msa1062150:CDS | 35.0% |
| ! | GCTTCAAAACCTTTTGTAGA+AGG | + | chr7_2:52746930-52746949 | None:intergenic | 35.0% |
| !!! | GTTTTGAAGCAAAGTGATGT+GGG | - | chr7_2:52746940-52746959 | Msa1062150:CDS | 35.0% |
| AGAAACACATTTGCCAGAAT+TGG | - | chr7_2:52747088-52747107 | Msa1062150:CDS | 35.0% | |
| TCGATTACAATGGAAGACAT+TGG | - | chr7_2:52747128-52747147 | Msa1062150:CDS | 35.0% | |
| ! | TACAGGTGAGCAAATTTTCA+TGG | - | chr7_2:52747176-52747195 | Msa1062150:CDS | 35.0% |
| !!! | TACATCCTGCTTTTGTTGTT+TGG | + | chr7_2:52747318-52747337 | None:intergenic | 35.0% |
| ! | ATGTATTTGCTAGAGAACAC+TGG | - | chr7_2:52747333-52747352 | Msa1062150:CDS | 35.0% |
| ! | GGTGATTTTGTGAAAGCTAA+TGG | - | chr7_2:52747439-52747458 | Msa1062150:CDS | 35.0% |
| TCACAATGAAATCTCCTTCT+TGG | + | chr7_2:52747468-52747487 | None:intergenic | 35.0% | |
| TGATCTCAATTCAATTGTGC+CGG | + | chr7_2:52747587-52747606 | None:intergenic | 35.0% | |
| ! | AAATCGGTTTAAACCAACCA+CGG | + | chr7_2:52747680-52747699 | None:intergenic | 35.0% |
| ! | AGAACAAATGACTCGAGTTT+TGG | + | chr7_2:52747813-52747832 | None:intergenic | 35.0% |
| TGATAAGAGGAGTTAAAGTG+AGG | - | chr7_2:52747945-52747964 | Msa1062150:CDS | 35.0% | |
| AAACCAGATGCAAAAAAAGC+AGG | - | chr7_2:52747983-52748002 | Msa1062150:CDS | 35.0% | |
| !!! | TTTCCTGCTTTTTTTGCATC+TGG | + | chr7_2:52747989-52748008 | None:intergenic | 35.0% |
| AAATCACAGAAAAACCAGCA+TGG | - | chr7_2:52748007-52748026 | Msa1062150:CDS | 35.0% | |
| AATCACAGAAAAACCAGCAT+GGG | - | chr7_2:52748008-52748027 | Msa1062150:CDS | 35.0% | |
| AATAATGCAGCAAATTCAGC+TGG | - | chr7_2:52748031-52748050 | Msa1062150:CDS | 35.0% | |
| !!! | TTTTTTCGCTTTGGTGAAGA+TGG | + | chr7_2:52748082-52748101 | None:intergenic | 35.0% |
| CATGGAAAATCAGGTAAAGG+AGG | + | chr7_2:52744818-52744837 | None:intergenic | 40.0% | |
| GATGACATGCATGGAAAATC+AGG | + | chr7_2:52744827-52744846 | None:intergenic | 40.0% | |
| TTCTTCTTCTGCAGCATCTT+GGG | - | chr7_2:52744940-52744959 | Msa1062150:intron | 40.0% | |
| !! | GTTGATGACAAAGTTGTTGG+AGG | + | chr7_2:52745058-52745077 | None:intergenic | 40.0% |
| !! | GCAGTTGATGACAAAGTTGT+TGG | + | chr7_2:52745061-52745080 | None:intergenic | 40.0% |
| ! | AATGATGTTGTTGTTGGTGG+TGG | - | chr7_2:52745130-52745149 | Msa1062150:intron | 40.0% |
| CAACAAGTTCAAGTGCAAGA+GGG | - | chr7_2:52745286-52745305 | Msa1062150:CDS | 40.0% | |
| AACAAGTTCAAGTGCAAGAG+GGG | - | chr7_2:52745287-52745306 | Msa1062150:CDS | 40.0% | |
| ! | TCCTCGATATTCACTTGTTG+CGG | + | chr7_2:52745370-52745389 | None:intergenic | 40.0% |
| !! | GACGATGTTTTTGTGTGTGA+TGG | - | chr7_2:52745400-52745419 | Msa1062150:CDS | 40.0% |
| ! | TGTGTGTGATGGTGTAAATG+GGG | - | chr7_2:52745411-52745430 | Msa1062150:CDS | 40.0% |
| !! | GTAAATGGGGAGAGTATTCA+AGG | - | chr7_2:52745424-52745443 | Msa1062150:CDS | 40.0% |
| ! | TGAGTATGGTTTTCTTGGAG+TGG | - | chr7_2:52745485-52745504 | Msa1062150:intron | 40.0% |
| ATCGAACAAAGATAGCGTCT+CGG | - | chr7_2:52745513-52745532 | Msa1062150:intron | 40.0% | |
| !! | GAAAGTGCTGCTAAGAGATT+AGG | - | chr7_2:52745577-52745596 | Msa1062150:CDS | 40.0% |
| !! | AGATTAGGTGGTGGAAAAGA+AGG | - | chr7_2:52745592-52745611 | Msa1062150:CDS | 40.0% |
| !! | GATTAGGTGGTGGAAAAGAA+GGG | - | chr7_2:52745593-52745612 | Msa1062150:CDS | 40.0% |
| !!! | GTTGTGTTTTGGTTCTGACA+TGG | + | chr7_2:52745754-52745773 | None:intergenic | 40.0% |
| CGTGTTTCAACCAAACATCA+TGG | - | chr7_2:52745800-52745819 | Msa1062150:CDS | 40.0% | |
| GGTTGTGAAAATTGTTGTGG+AGG | + | chr7_2:52745850-52745869 | None:intergenic | 40.0% | |
| GTTGCTGATCCTTACACAAA+TGG | - | chr7_2:52745895-52745914 | Msa1062150:intron | 40.0% | |
| TGATAGTCATTAGTAGCAGC+AGG | + | chr7_2:52745952-52745971 | None:intergenic | 40.0% | |
| CCTCCAAAATTCATACCATG+AGG | + | chr7_2:52746072-52746091 | None:intergenic | 40.0% | |
| ! | CCTCATGGTATGAATTTTGG+AGG | - | chr7_2:52746069-52746088 | Msa1062150:intron | 40.0% |
| ! | CTAGCTTCTTTTGTAGCAGA+AGG | + | chr7_2:52746162-52746181 | None:intergenic | 40.0% |
| AGAAGCTAGAAAGAAGAGGA+TGG | - | chr7_2:52746173-52746192 | Msa1062150:intron | 40.0% | |
| TCTGATCCACTTGCAAGATT+AGG | - | chr7_2:52746264-52746283 | Msa1062150:CDS | 40.0% | |
| ATCCAGGTAACTGGATGTAT+TGG | - | chr7_2:52746334-52746353 | Msa1062150:CDS | 40.0% | |
| ! | ATGTATTGGCAGACTATGAC+AGG | - | chr7_2:52746348-52746367 | Msa1062150:CDS | 40.0% |
| ATGGTCAACTACCACAATTG+TGG | - | chr7_2:52746642-52746661 | Msa1062150:CDS | 40.0% | |
| TATCCATTTGTCTGCGGATA+TGG | - | chr7_2:52746727-52746746 | Msa1062150:CDS | 40.0% | |
| GGAAGCCTGAAAAGAATTTG+AGG | - | chr7_2:52746902-52746921 | Msa1062150:CDS | 40.0% | |
| !!! | GGTTTTGAAGCAAAGTGATG+TGG | - | chr7_2:52746939-52746958 | Msa1062150:CDS | 40.0% |
| AACACATTTGCCAGAATTGG+AGG | - | chr7_2:52747091-52747110 | Msa1062150:CDS | 40.0% | |
| ACATTGGAACTTCTCGAGTT+TGG | - | chr7_2:52747144-52747163 | Msa1062150:CDS | 40.0% | |
| ! | GAGTTTGGAATATGCGTTAC+AGG | - | chr7_2:52747159-52747178 | Msa1062150:CDS | 40.0% |
| ! | CTTCTTGGAGCATCAGATAT+TGG | - | chr7_2:52747292-52747311 | Msa1062150:CDS | 40.0% |
| ATTGGCCAAACAACAAAAGC+AGG | - | chr7_2:52747310-52747329 | Msa1062150:CDS | 40.0% | |
| !! | AAAGCTAATGGACTCCAAGA+AGG | - | chr7_2:52747451-52747470 | Msa1062150:CDS | 40.0% |
| GATTTGGATTTCCTAGTTCC+CGG | - | chr7_2:52747565-52747584 | Msa1062150:CDS | 40.0% | |
| GATCTCAATTCAATTGTGCC+GGG | + | chr7_2:52747586-52747605 | None:intergenic | 40.0% | |
| ! | TTCAATTAGTTGAACGGGCT+TGG | + | chr7_2:52747637-52747656 | None:intergenic | 40.0% |
| ! | TGGTTGAATCGATTCAACCA+TGG | + | chr7_2:52747767-52747786 | None:intergenic | 40.0% |
| TCGATTCAACCAATTAACCG+TGG | - | chr7_2:52747775-52747794 | Msa1062150:CDS | 40.0% | |
| AATTTAGACGGTTGGATGGA+TGG | + | chr7_2:52747836-52747855 | None:intergenic | 40.0% | |
| TTGCAATTTAGACGGTTGGA+TGG | + | chr7_2:52747840-52747859 | None:intergenic | 40.0% | |
| GGAACTGCAGTGGATAATAA+TGG | - | chr7_2:52748052-52748071 | Msa1062150:CDS | 40.0% | |
| ! | GAGGATGATGATGACATGCA+TGG | + | chr7_2:52744836-52744855 | None:intergenic | 45.0% |
| ACTAGCAGAGGAAGAAGAAG+AGG | + | chr7_2:52744921-52744940 | None:intergenic | 45.0% | |
| TGCAGAAGAAGAACTAGCAG+AGG | + | chr7_2:52744933-52744952 | None:intergenic | 45.0% | |
| GTTCTTCTTCTGCAGCATCT+TGG | - | chr7_2:52744939-52744958 | Msa1062150:intron | 45.0% | |
| CAACAGCAGCAACAAGATCT+TGG | - | chr7_2:52745097-52745116 | Msa1062150:intron | 45.0% | |
| GCAACAAGTTCAAGTGCAAG+AGG | - | chr7_2:52745285-52745304 | Msa1062150:CDS | 45.0% | |
| ACCGCAACAAGTGAATATCG+AGG | - | chr7_2:52745366-52745385 | Msa1062150:intron | 45.0% | |
| ! | AGTGCTGCTAAGAGATTAGG+TGG | - | chr7_2:52745580-52745599 | Msa1062150:CDS | 45.0% |
| TTGAAACACGCGTTCGATTC+AGG | + | chr7_2:52745790-52745809 | None:intergenic | 45.0% | |
| ! | TGTTGTGGAGGTACAATGAG+AGG | + | chr7_2:52745838-52745857 | None:intergenic | 45.0% |
| TCACAACCAATGGTTGGAGT+TGG | - | chr7_2:52745862-52745881 | Msa1062150:intron | 45.0% | |
| !! | TAGTAGCAGCAGGTTGGTAA+GGG | + | chr7_2:52745942-52745961 | None:intergenic | 45.0% |
| !! | TTAGTAGCAGCAGGTTGGTA+AGG | + | chr7_2:52745943-52745962 | None:intergenic | 45.0% |
| AGTCATTAGTAGCAGCAGGT+TGG | + | chr7_2:52745948-52745967 | None:intergenic | 45.0% | |
| ! | TATCAGTTGTTTCCTGGTCC+TGG | - | chr7_2:52746114-52746133 | Msa1062150:intron | 45.0% |
| AACCTCATCAACCTATCACC+AGG | + | chr7_2:52746135-52746154 | None:intergenic | 45.0% | |
| !! | GGTGATAGGTTGATGAGGTT+AGG | - | chr7_2:52746135-52746154 | Msa1062150:intron | 45.0% |
| CTAGAAAGAAGAGGATGGCT+CGG | - | chr7_2:52746178-52746197 | Msa1062150:intron | 45.0% | |
| GGCGGTTTATGTCTCATCAT+AGG | - | chr7_2:52746205-52746224 | Msa1062150:intron | 45.0% | |
| GATCCACTTGCAAGATTAGG+TGG | - | chr7_2:52746267-52746286 | Msa1062150:CDS | 45.0% | |
| AATTGCACCAATGTTGCTGC+TGG | - | chr7_2:52746297-52746316 | Msa1062150:CDS | 45.0% | |
| CTCATGCAAATCCAGGTAAC+TGG | - | chr7_2:52746325-52746344 | Msa1062150:CDS | 45.0% | |
| TGCCAATACATCCAGTTACC+TGG | + | chr7_2:52746339-52746358 | None:intergenic | 45.0% | |
| TATTGGCAGACTATGACAGG+TGG | - | chr7_2:52746351-52746370 | Msa1062150:CDS | 45.0% | |
| ATTGGCAGACTATGACAGGT+GGG | - | chr7_2:52746352-52746371 | Msa1062150:CDS | 45.0% | |
| AACTCTGTGTCTGCATGGTA+GGG | + | chr7_2:52746443-52746462 | None:intergenic | 45.0% | |
| TCCACAAACCTGTCTCCTAT+CGG | + | chr7_2:52746487-52746506 | None:intergenic | 45.0% | |
| !!! | GGTTTTAGAGGTCTCTGCAA+CGG | - | chr7_2:52746677-52746696 | Msa1062150:CDS | 45.0% |
| CTGCGGATATGGTGGTATAA+TGG | - | chr7_2:52746738-52746757 | Msa1062150:CDS | 45.0% | |
| CAAAGTGATGTGGGAAGTCT+GGG | - | chr7_2:52746949-52746968 | Msa1062150:CDS | 45.0% | |
| AAAGTGATGTGGGAAGTCTG+GGG | - | chr7_2:52746950-52746969 | Msa1062150:CDS | 45.0% | |
| ATTCAATTGTGCCGGGAACT+AGG | + | chr7_2:52747579-52747598 | None:intergenic | 45.0% | |
| ! | TTAGTTGAACGGGCTTGGTT+TGG | + | chr7_2:52747632-52747651 | None:intergenic | 45.0% |
| ! | TTCGTCGTCTTGTTCAACCA+TGG | - | chr7_2:52747747-52747766 | Msa1062150:CDS | 45.0% |
| GTTAAAGTGAGGCAGCAACA+AGG | - | chr7_2:52747956-52747975 | Msa1062150:CDS | 45.0% | |
| TTGCTGCATTATTCCCATGC+TGG | + | chr7_2:52748024-52748043 | None:intergenic | 45.0% | |
| AAATTCAGCTGGAACTGCAG+TGG | - | chr7_2:52748042-52748061 | Msa1062150:CDS | 45.0% | |
| !! | TGTTGGTGGTGGTGATTGCA+TGG | - | chr7_2:52745141-52745160 | Msa1062150:intron | 50.0% |
| GCTGCTAAGAGATTAGGTGG+TGG | - | chr7_2:52745583-52745602 | Msa1062150:CDS | 50.0% | |
| CCAACTCCAACTCCAACCAT+TGG | + | chr7_2:52745871-52745890 | None:intergenic | 50.0% | |
| CCAATGGTTGGAGTTGGAGT+TGG | - | chr7_2:52745868-52745887 | Msa1062150:intron | 50.0% | |
| TGTTTCCTGGTCCTGGTGAT+AGG | - | chr7_2:52746121-52746140 | Msa1062150:intron | 50.0% | |
| ATCAACCTATCACCAGGACC+AGG | + | chr7_2:52746129-52746148 | None:intergenic | 50.0% | |
| !! | GTCCTGGTGATAGGTTGATG+AGG | - | chr7_2:52746130-52746149 | Msa1062150:intron | 50.0% |
| CCACCACCTAATCTTGCAAG+TGG | + | chr7_2:52746273-52746292 | None:intergenic | 50.0% | |
| CCACTTGCAAGATTAGGTGG+TGG | - | chr7_2:52746270-52746289 | Msa1062150:CDS | 50.0% | |
| AGAACCACCAGCAGCAACAT+TGG | + | chr7_2:52746307-52746326 | None:intergenic | 50.0% | |
| GGTGGTTCTCATGCAAATCC+AGG | - | chr7_2:52746318-52746337 | Msa1062150:CDS | 50.0% | |
| TTCCTTGGCACCTGTTGTTC+CGG | - | chr7_2:52746383-52746402 | Msa1062150:CDS | 50.0% | |
| GAACTCTGTGTCTGCATGGT+AGG | + | chr7_2:52746444-52746463 | None:intergenic | 50.0% | |
| GTGAGAACTCTGTGTCTGCA+TGG | + | chr7_2:52746448-52746467 | None:intergenic | 50.0% | |
| CAGACACAGAGTTCTCACCA+GGG | - | chr7_2:52746450-52746469 | Msa1062150:CDS | 50.0% | |
| CCACAAACCTGTCTCCTATC+GGG | + | chr7_2:52746486-52746505 | None:intergenic | 50.0% | |
| CGGCATAGCAACCACAATTG+TGG | - | chr7_2:52746697-52746716 | Msa1062150:CDS | 50.0% | |
| CCACCATATCCGCAGACAAA+TGG | + | chr7_2:52746733-52746752 | None:intergenic | 50.0% | |
| CCATTTGTCTGCGGATATGG+TGG | - | chr7_2:52746730-52746749 | Msa1062150:CDS | 50.0% | |
| GCAAAGTGATGTGGGAAGTC+TGG | - | chr7_2:52746948-52746967 | Msa1062150:CDS | 50.0% | |
| CCATCTCTTGCCTCCAATTC+TGG | + | chr7_2:52747104-52747123 | None:intergenic | 50.0% | |
| CCAGAATTGGAGGCAAGAGA+TGG | - | chr7_2:52747101-52747120 | Msa1062150:CDS | 50.0% | |
| TGAATCCTCGGGTTAAACCG+TGG | - | chr7_2:52747660-52747679 | Msa1062150:CDS | 50.0% | |
| AACCAATTAACCGTGGCTCG+TGG | - | chr7_2:52747782-52747801 | Msa1062150:CDS | 50.0% | |
| GCGTCTCGGCGAATGATTTG+AGG | - | chr7_2:52745527-52745546 | Msa1062150:intron | 55.0% | |
| ! | AGAAGAGGATGGCTCGGCAA+CGG | - | chr7_2:52746184-52746203 | Msa1062150:intron | 55.0% |
| TGCACCAATGTTGCTGCTGG+TGG | - | chr7_2:52746300-52746319 | Msa1062150:CDS | 55.0% | |
| TCTGTGTCTGCATGGTAGGG+CGG | + | chr7_2:52746440-52746459 | None:intergenic | 55.0% | |
| GCAGACACAGAGTTCTCACC+AGG | - | chr7_2:52746449-52746468 | Msa1062150:CDS | 55.0% | |
| AAGTGCACCCGATAGGAGAC+AGG | - | chr7_2:52746476-52746495 | Msa1062150:CDS | 55.0% | |
| CCCGATAGGAGACAGGTTTG+TGG | - | chr7_2:52746483-52746502 | Msa1062150:CDS | 55.0% | |
| !! | TGAACGGGCTTGGTTTGGTC+TGG | + | chr7_2:52747627-52747646 | None:intergenic | 55.0% |
| TCCTCGGGTTAAACCGTGGT+TGG | - | chr7_2:52747664-52747683 | Msa1062150:CDS | 55.0% | |
| ACCAACCACGGTTTAACCCG+AGG | + | chr7_2:52747668-52747687 | None:intergenic | 55.0% | |
| GACCACGAGCCACGGTTAAT+TGG | + | chr7_2:52747787-52747806 | None:intergenic | 55.0% | |
| TTTGGTGAGACCACGAGCCA+CGG | + | chr7_2:52747795-52747814 | None:intergenic | 55.0% | |
| AGGTGGGACAGCAGCTTCCT+TGG | - | chr7_2:52746368-52746387 | Msa1062150:CDS | 60.0% | |
| AGCCGGAACAACAGGTGCCA+AGG | + | chr7_2:52746388-52746407 | None:intergenic | 60.0% | |
| CGGTCTACTGGAGGCTGTGT+CGG | + | chr7_2:52746414-52746433 | None:intergenic | 60.0% | |
| TCTGCATGGTAGGGCGGTCA+CGG | + | chr7_2:52746434-52746453 | None:intergenic | 60.0% | |
| TATCGGGTGCACTTCGACCC+TGG | + | chr7_2:52746470-52746489 | None:intergenic | 60.0% | |
| AGGGTCGAAGTGCACCCGAT+AGG | - | chr7_2:52746469-52746488 | Msa1062150:CDS | 60.0% | |
| ! | AGAGGATGGCTCGGCAACGG+CGG | - | chr7_2:52746187-52746206 | Msa1062150:intron | 65.0% |
| ! | GTCGGCTCAGCCGGAACAAC+AGG | + | chr7_2:52746396-52746415 | None:intergenic | 65.0% |
| GTAGGGCGGTCACGGTCTAC+TGG | + | chr7_2:52746426-52746445 | None:intergenic | 65.0% | |
| !! | GGAGGCTGTGTCGGCTCAGC+CGG | + | chr7_2:52746405-52746424 | None:intergenic | 70.0% |
| GGGCGGTCACGGTCTACTGG+AGG | + | chr7_2:52746423-52746442 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 52744647 | 52748105 | 52744647 | ID=Msa1062150;Name=Msa1062150 |
| chr7_2 | mRNA | 52744647 | 52748105 | 52744647 | ID=Msa1062150-mRNA-1;Parent=Msa1062150;Name=Msa1062150-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|6|0|776 |
| chr7_2 | exon | 52746255 | 52748105 | 52746255 | ID=Msa1062150-mRNA-1:exon:9526;Parent=Msa1062150-mRNA-1 |
| chr7_2 | exon | 52745762 | 52745854 | 52745762 | ID=Msa1062150-mRNA-1:exon:9525;Parent=Msa1062150-mRNA-1 |
| chr7_2 | exon | 52745572 | 52745672 | 52745572 | ID=Msa1062150-mRNA-1:exon:9524;Parent=Msa1062150-mRNA-1 |
| chr7_2 | exon | 52745398 | 52745444 | 52745398 | ID=Msa1062150-mRNA-1:exon:9523;Parent=Msa1062150-mRNA-1 |
| chr7_2 | exon | 52745236 | 52745312 | 52745236 | ID=Msa1062150-mRNA-1:exon:9522;Parent=Msa1062150-mRNA-1 |
| chr7_2 | exon | 52744647 | 52744808 | 52744647 | ID=Msa1062150-mRNA-1:exon:9521;Parent=Msa1062150-mRNA-1 |
| chr7_2 | CDS | 52746255 | 52748105 | 52746255 | ID=Msa1062150-mRNA-1:cds;Parent=Msa1062150-mRNA-1 |
| chr7_2 | CDS | 52745762 | 52745854 | 52745762 | ID=Msa1062150-mRNA-1:cds;Parent=Msa1062150-mRNA-1 |
| chr7_2 | CDS | 52745572 | 52745672 | 52745572 | ID=Msa1062150-mRNA-1:cds;Parent=Msa1062150-mRNA-1 |
| chr7_2 | CDS | 52745398 | 52745444 | 52745398 | ID=Msa1062150-mRNA-1:cds;Parent=Msa1062150-mRNA-1 |
| chr7_2 | CDS | 52745236 | 52745312 | 52745236 | ID=Msa1062150-mRNA-1:cds;Parent=Msa1062150-mRNA-1 |
| chr7_2 | CDS | 52744647 | 52744808 | 52744647 | ID=Msa1062150-mRNA-1:cds;Parent=Msa1062150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
