Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1062160 | XP_039683995.1 | 95.310 | 725 | 28 | 3 | 1 | 725 | 1 | 719 | 0.0 | 1440 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1062160 | sp|Q01593|ABI3_ARATH | 46.049 | 734 | 271 | 26 | 19 | 725 | 32 | 667 | 8.70e-147 | 449 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1062160 | A0A072U0Z8 | 95.310 | 725 | 28 | 3 | 1 | 725 | 1 | 719 | 0.0 | 1440 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1062160 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1062160 | MtrunA17_Chr7g0237841 | 95.310 | 725 | 28 | 3 | 1 | 725 | 1 | 719 | 0.0 | 1440 |
| Msa1062160 | MtrunA17_Chr7g0251891 | 58.947 | 95 | 39 | 0 | 624 | 718 | 11 | 105 | 5.29e-33 | 126 |
| Msa1062160 | MtrunA17_Chr4g0047031 | 44.211 | 95 | 52 | 1 | 624 | 718 | 172 | 265 | 1.71e-19 | 90.9 |
| Msa1062160 | MtrunA17_Chr7g0244871 | 40.909 | 88 | 51 | 1 | 629 | 716 | 12 | 98 | 3.31e-18 | 80.5 |
| Msa1062160 | MtrunA17_Chr3g0107701 | 38.000 | 100 | 61 | 1 | 629 | 728 | 338 | 436 | 2.54e-16 | 83.6 |
| Msa1062160 | MtrunA17_Chr2g0281191 | 39.000 | 100 | 60 | 1 | 629 | 728 | 352 | 450 | 3.64e-16 | 83.2 |
| Msa1062160 | MtrunA17_Chr4g0012861 | 36.000 | 100 | 63 | 1 | 629 | 728 | 314 | 412 | 1.11e-15 | 81.6 |
| Msa1062160 | MtrunA17_Chr5g0432721 | 39.048 | 105 | 61 | 3 | 629 | 732 | 321 | 423 | 3.80e-15 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1062160 | AT3G24650.1 | 46.049 | 734 | 271 | 26 | 19 | 725 | 32 | 667 | 8.85e-148 | 449 |
| Msa1062160 | AT3G26790.1 | 57.983 | 119 | 47 | 2 | 607 | 725 | 72 | 187 | 7.76e-37 | 141 |
| Msa1062160 | AT1G28300.1 | 51.754 | 114 | 46 | 1 | 624 | 737 | 165 | 269 | 1.81e-31 | 127 |
| Msa1062160 | AT2G30470.1 | 38.614 | 101 | 61 | 1 | 625 | 725 | 290 | 389 | 1.57e-16 | 84.7 |
| Msa1062160 | AT4G32010.2 | 38.000 | 100 | 61 | 1 | 629 | 728 | 281 | 379 | 2.95e-16 | 83.6 |
| Msa1062160 | AT4G32010.1 | 38.000 | 100 | 61 | 1 | 629 | 728 | 285 | 383 | 2.99e-16 | 83.6 |
| Msa1062160 | AT4G21550.2 | 37.931 | 87 | 51 | 2 | 629 | 715 | 327 | 410 | 7.57e-14 | 75.5 |
| Msa1062160 | AT4G21550.3 | 39.560 | 91 | 51 | 3 | 629 | 719 | 327 | 413 | 9.31e-14 | 75.1 |
| Msa1062160 | AT4G21550.1 | 37.931 | 87 | 51 | 2 | 629 | 715 | 327 | 410 | 1.11e-13 | 75.1 |
Find 149 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACTCATGGTATGAATTT+TGG | 0.145459 | 7_2:+52778981 | Msa1062160:CDS |
| CCATCTCTTGCCTCCAATTC+TGG | 0.191237 | 7_2:-52780015 | None:intergenic |
| GTTCTTCATCTGCAGCTTCT+TGG | 0.226383 | 7_2:+52777851 | Msa1062160:CDS |
| GAAATTTAGCAGAAGAAAAT+TGG | 0.230877 | 7_2:+52777620 | Msa1062160:CDS |
| GAAACAGAACAAGTTGGTTT+TGG | 0.246821 | 7_2:+52777598 | Msa1062160:CDS |
| CATGGATGATGTTAACATTA+TGG | 0.261818 | 7_2:+52778071 | Msa1062160:CDS |
| TCACTATGAAATCTCCTTCT+TGG | 0.299532 | 7_2:-52780374 | None:intergenic |
| TTTGTCATCAACTGCTTCTA+TGG | 0.302150 | 7_2:+52777978 | Msa1062160:CDS |
| TTCTTCATCTGCAGCTTCTT+GGG | 0.313124 | 7_2:+52777852 | Msa1062160:CDS |
| AATTCTTATCAGTTGTTTCC+TGG | 0.316637 | 7_2:+52779023 | Msa1062160:CDS |
| TTGAAACACGCATTCGATTC+AGG | 0.324156 | 7_2:-52778699 | None:intergenic |
| CAAATGTGTTTGCTGTGTTT+TGG | 0.327910 | 7_2:-52778674 | None:intergenic |
| AGTATTCAAGGAGATGAATT+AGG | 0.332563 | 7_2:+52778348 | Msa1062160:CDS |
| AGAAACACATTTGCCAGAAT+TGG | 0.333835 | 7_2:+52780002 | Msa1062160:CDS |
| GTTAACATTATGGATACTTT+TGG | 0.334842 | 7_2:+52778081 | Msa1062160:CDS |
| TGTTTCCTGGTCCTGGTGAT+AGG | 0.335577 | 7_2:+52779036 | Msa1062160:CDS |
| ACATTGGAACTTCTCGTGTT+TGG | 0.336580 | 7_2:+52780058 | Msa1062160:CDS |
| TGTTGAAGCTTATTCTTGAA+TGG | 0.344675 | 7_2:+52778538 | Msa1062160:CDS |
| TTCCTTGGCTCCTGTTGTTC+CGG | 0.345785 | 7_2:+52779298 | Msa1062160:CDS |
| TATCAGTTGTTTCCTGGTCC+TGG | 0.347158 | 7_2:+52779029 | Msa1062160:CDS |
| TTTGTGTGTGACGGTGTAAA+TGG | 0.349561 | 7_2:+52778318 | Msa1062160:CDS |
| GATCAAGATGGTGATCTCTT+AGG | 0.364087 | 7_2:+52777661 | Msa1062160:CDS |
| CGATGATAGTGCATGATGAT+AGG | 0.368561 | 7_2:+52778247 | Msa1062160:CDS |
| GCAAAGTGATGTGGGAAGTC+TGG | 0.373169 | 7_2:+52779862 | Msa1062160:CDS |
| TGAAGATGAAAACCCTTTAG+TGG | 0.375000 | 7_2:+52778161 | Msa1062160:CDS |
| TTGTGTGTGACGGTGTAAAT+GGG | 0.391434 | 7_2:+52778319 | Msa1062160:CDS |
| CTCATACAAATCCAGGTAAC+TGG | 0.393758 | 7_2:+52779240 | Msa1062160:CDS |
| TCTGATCCACTTGCAAGATT+AGG | 0.399738 | 7_2:+52779179 | Msa1062160:CDS |
| GTCGGCTCAGCCGGAACAAC+AGG | 0.404834 | 7_2:-52779308 | None:intergenic |
| GGTGACTTTGTGAAGGCTAA+TGG | 0.405230 | 7_2:+52780348 | Msa1062160:intron |
| TGGTGGGACAGCAGCTTCCT+TGG | 0.405884 | 7_2:+52779283 | Msa1062160:CDS |
| GAAACAGAACCATTTGTGTA+AGG | 0.406123 | 7_2:-52778816 | None:intergenic |
| GTGTTTGGAATATGCGATAT+AGG | 0.406922 | 7_2:+52780073 | Msa1062160:CDS |
| TATCGGGTGCACTTCGGCCC+TGG | 0.412632 | 7_2:-52779382 | None:intergenic |
| GTTGAAGCTTATTCTTGAAT+GGG | 0.419608 | 7_2:+52778539 | Msa1062160:CDS |
| TCGAATAATGATGTTGTTGT+TGG | 0.421700 | 7_2:+52778036 | Msa1062160:CDS |
| GCAAATGATTGATTGTAGTT+TGG | 0.423245 | 7_2:-52778933 | None:intergenic |
| CTTGAGGTTCCTTCTACAAA+AGG | 0.425157 | 7_2:+52779832 | Msa1062160:CDS |
| AACCTTGAATATTCTGATGA+TGG | 0.426625 | 7_2:-52779157 | None:intergenic |
| TTTGATCTAGCCATGATGTT+TGG | 0.427680 | 7_2:-52778722 | None:intergenic |
| GATGACATGCATGGAAAATC+AGG | 0.429831 | 7_2:-52777736 | None:intergenic |
| CAAAGTGATGTGGGAAGTCT+GGG | 0.435116 | 7_2:+52779863 | Msa1062160:CDS |
| TGTTGGTGGTGGTGATTGCA+TGG | 0.439533 | 7_2:+52778053 | Msa1062160:CDS |
| AACCATCATCAGAATATTCA+AGG | 0.441107 | 7_2:+52779155 | Msa1062160:CDS |
| AGATTAGGTGGTGGAAAAGA+AGG | 0.441852 | 7_2:+52778504 | Msa1062160:CDS |
| GTGAGAATTCTGTGTCTGTA+TGG | 0.443912 | 7_2:-52779360 | None:intergenic |
| GTTGCTGATCCTTACACAAA+TGG | 0.448875 | 7_2:+52778807 | Msa1062160:CDS |
| TGTTGAGGAACAAGATTTGA+AGG | 0.450486 | 7_2:-52778624 | None:intergenic |
| CTTGTGTGAAATCCACTAAA+GGG | 0.453109 | 7_2:-52778173 | None:intergenic |
| CCAATGGTTGGAGTTGGAGT+TGG | 0.454100 | 7_2:+52778780 | Msa1062160:CDS |
| CTAGTCATCTTCAAAACAAA+AGG | 0.455119 | 7_2:+52778568 | Msa1062160:CDS |
| GCAGTTGATGACAAAGTTGT+TGG | 0.458355 | 7_2:-52777970 | None:intergenic |
| TTAGATCTTGTTATGGAGTG+TGG | 0.458680 | 7_2:+52777547 | None:intergenic |
| ATCCAGGTAACTGGATGTAT+TGG | 0.458694 | 7_2:+52779249 | Msa1062160:CDS |
| AAGTTCCAAGCTTATCTCTC+AGG | 0.464760 | 7_2:-52780483 | None:intergenic |
| CAACAACAGCAACAAGATCT+TGG | 0.467069 | 7_2:+52778009 | Msa1062160:CDS |
| TTAGTAGCAGCAGGTTGGTA+AGG | 0.468267 | 7_2:-52778852 | None:intergenic |
| GAAAGTGCTGCTAAGAGATT+AGG | 0.469707 | 7_2:+52778489 | Msa1062160:CDS |
| AATGGGGAAGAGAGTATTCA+AGG | 0.474011 | 7_2:+52778336 | Msa1062160:CDS |
| AATGATGTTGTTGTTGGTGG+TGG | 0.475401 | 7_2:+52778042 | Msa1062160:CDS |
| TGTAAGTGATGAAATGAGTA+TGG | 0.477564 | 7_2:+52778383 | Msa1062160:CDS |
| AATAATGATGTTGTTGTTGG+TGG | 0.478444 | 7_2:+52778039 | Msa1062160:CDS |
| GGTGATAGGTTGATGAGGTT+AGG | 0.481801 | 7_2:+52779050 | Msa1062160:CDS |
| TTTAGATCTGCATGCAAAGT+TGG | 0.483324 | 7_2:+52777570 | Msa1062160:CDS |
| AACACATTTGCCAGAATTGG+AGG | 0.485525 | 7_2:+52780005 | Msa1062160:CDS |
| GGCGGTTTATGTCTCATCAT+AGG | 0.485732 | 7_2:+52779120 | Msa1062160:CDS |
| TCCTCGATATTCACTTGTTG+CGG | 0.497932 | 7_2:-52778279 | None:intergenic |
| TCCACAAACCTGTCTCCTAT+CGG | 0.498147 | 7_2:-52779399 | None:intergenic |
| CCACAAACCTGTCTCCTATC+GGG | 0.499467 | 7_2:-52779398 | None:intergenic |
| GAATTCTGTGTCTGTATGGT+GGG | 0.500175 | 7_2:-52779356 | None:intergenic |
| TCAATTACAATGGAAGACAT+TGG | 0.500827 | 7_2:+52780042 | Msa1062160:CDS |
| TCTTGTGTGAAATCCACTAA+AGG | 0.501764 | 7_2:-52778174 | None:intergenic |
| TCACAACCAATGGTTGGAGT+TGG | 0.514632 | 7_2:+52778774 | Msa1062160:CDS |
| GGTGGTTCTCATACAAATCC+AGG | 0.515510 | 7_2:+52779233 | Msa1062160:CDS |
| CCAGAATTGGAGGCAAGAGA+TGG | 0.521085 | 7_2:+52780015 | Msa1062160:CDS |
| TGCCAATACATCCAGTTACC+TGG | 0.522443 | 7_2:-52779251 | None:intergenic |
| TGATAGTCATTAGTAGCAGC+AGG | 0.526692 | 7_2:-52778861 | None:intergenic |
| CATGTATTAGATTATCATCA+TGG | 0.526970 | 7_2:+52777940 | Msa1062160:CDS |
| GTGTCTCGGCAAATGATTTG+AGG | 0.530612 | 7_2:+52778439 | Msa1062160:CDS |
| GATTAGGTGGTGGAAAAGAA+GGG | 0.531409 | 7_2:+52778505 | Msa1062160:CDS |
| TGCACCAATGTTGCTGCTGG+TGG | 0.534906 | 7_2:+52779215 | Msa1062160:CDS |
| AGAAGAGGATGGCTCGGCAA+CGG | 0.537506 | 7_2:+52779099 | Msa1062160:CDS |
| GATGATAGTGCATGATGATA+GGG | 0.538792 | 7_2:+52778248 | Msa1062160:CDS |
| AAGTGCACCCGATAGGAGAC+AGG | 0.539885 | 7_2:+52779391 | Msa1062160:CDS |
| AGAATTCTGTGTCTGTATGG+TGG | 0.540584 | 7_2:-52779357 | None:intergenic |
| AGCCGGAACAACAGGAGCCA+AGG | 0.545036 | 7_2:-52779300 | None:intergenic |
| AGATGGAATTTCAATTACAA+TGG | 0.546108 | 7_2:+52780032 | Msa1062160:CDS |
| AAACTACAATCAATCATTTG+CGG | 0.546590 | 7_2:+52778935 | Msa1062160:CDS |
| GGGCGATCACGATCTACTGC+AGG | 0.549136 | 7_2:-52779335 | None:intergenic |
| ACTAGCAGAGGAAGAAGAAG+AGG | 0.549666 | 7_2:-52777830 | None:intergenic |
| GATGTTGAAGTAGATAATCA+AGG | 0.555651 | 7_2:+52777889 | Msa1062160:CDS |
| TAGTAGCAGCAGGTTGGTAA+GGG | 0.556194 | 7_2:-52778851 | None:intergenic |
| ATTGGTTGTGAAAATTGTTG+TGG | 0.556322 | 7_2:-52778762 | None:intergenic |
| AGGTAATATTGTGTTAATGT+TGG | 0.556564 | 7_2:-52778604 | None:intergenic |
| ATTGGCCAAACAACAAAAGC+AGG | 0.559048 | 7_2:+52780219 | Msa1062160:CDS |
| AGAACCACCAGCAGCAACAT+TGG | 0.559637 | 7_2:-52779219 | None:intergenic |
| ATGCATGGAAAATCAGGTAA+AGG | 0.563307 | 7_2:-52777730 | None:intergenic |
| GATCCACTTGCAAGATTAGG+TGG | 0.564399 | 7_2:+52779182 | Msa1062160:CDS |
| ACAGACACAGAATTCTCACC+AGG | 0.564460 | 7_2:+52779364 | Msa1062160:CDS |
| TGTTGGAATCAAATCATTCG+TGG | 0.564755 | 7_2:+52778886 | Msa1062160:CDS |
| CAAAAGAAGCTAGAAAGAAG+AGG | 0.568012 | 7_2:+52779084 | Msa1062160:CDS |
| ATCTAACAAAGATAGTGTCT+CGG | 0.568134 | 7_2:+52778425 | Msa1062160:CDS |
| GCAACAAGTTCAAGTGCAAG+AGG | 0.568536 | 7_2:+52778197 | Msa1062160:CDS |
| CTATCATCATGCACTATCAT+CGG | 0.568658 | 7_2:-52778246 | None:intergenic |
| TCTTGAAACTGTTGTTGTTG+AGG | 0.572652 | 7_2:-52778639 | None:intergenic |
| CATGGAAAATCAGGTAAAGG+TGG | 0.574020 | 7_2:-52777727 | None:intergenic |
| ATGTATTGGCAGACTATGAC+TGG | 0.575203 | 7_2:+52779263 | Msa1062160:CDS |
| CAACAAGTTCAAGTGCAAGA+GGG | 0.577061 | 7_2:+52778198 | Msa1062160:CDS |
| CCACCACCTAATCTTGCAAG+TGG | 0.579510 | 7_2:-52779185 | None:intergenic |
| CTAGAAAGAAGAGGATGGCT+CGG | 0.580461 | 7_2:+52779093 | Msa1062160:CDS |
| AATACTACAAATGATCAAGA+TGG | 0.586104 | 7_2:+52777649 | Msa1062160:CDS |
| GTTGGAATCAAATCATTCGT+GGG | 0.586757 | 7_2:+52778887 | Msa1062160:CDS |
| GTAAATGAAACAGAACAAGT+TGG | 0.588116 | 7_2:+52777592 | Msa1062160:CDS |
| CGTGTTTCAACCAAACATCA+TGG | 0.589088 | 7_2:+52778712 | Msa1062160:CDS |
| AATTGCACCAATGTTGCTGC+TGG | 0.589434 | 7_2:+52779212 | Msa1062160:CDS |
| GTCTCCTATCGGGTGCACTT+CGG | 0.589557 | 7_2:-52779388 | None:intergenic |
| AGGGCCGAAGTGCACCCGAT+AGG | 0.592099 | 7_2:+52779384 | Msa1062160:CDS |
| CCAACTCCAACTCCAACCAT+TGG | 0.593836 | 7_2:-52778780 | None:intergenic |
| TACTAATGACTATCACATGT+TGG | 0.596503 | 7_2:+52778869 | Msa1062160:CDS |
| AAGGCTAATGGACTCCAAGA+AGG | 0.600158 | 7_2:+52780360 | Msa1062160:CDS |
| AACCTCATCAACCTATCACC+AGG | 0.601661 | 7_2:-52779047 | None:intergenic |
| AGCAATGTGCTACAAACTCA+TGG | 0.604569 | 7_2:+52778969 | Msa1062160:CDS |
| GGAAGCCTGAAAAGAACTTG+AGG | 0.606267 | 7_2:+52779816 | Msa1062160:CDS |
| GTTGATGACAAAGTTGTTGG+AGG | 0.610564 | 7_2:-52777967 | None:intergenic |
| AGAAGCTAGAAAGAAGAGGA+TGG | 0.610747 | 7_2:+52779088 | Msa1062160:CDS |
| AACAAGTTCAAGTGCAAGAG+GGG | 0.612587 | 7_2:+52778199 | Msa1062160:CDS |
| TGCAGATGAAGAACTAGCAG+AGG | 0.612917 | 7_2:-52777842 | None:intergenic |
| AGAGGATGGCTCGGCAACGG+CGG | 0.616260 | 7_2:+52779102 | Msa1062160:CDS |
| GGTTGTGAAAATTGTTGTGG+AGG | 0.618026 | 7_2:-52778759 | None:intergenic |
| TGTAGTTGAAGTACATGCAA+TGG | 0.622529 | 7_2:-52777797 | None:intergenic |
| TGTGTGTGACGGTGTAAATG+GGG | 0.629065 | 7_2:+52778320 | Msa1062160:CDS |
| AGTCATTAGTAGCAGCAGGT+TGG | 0.632190 | 7_2:-52778857 | None:intergenic |
| ATCAACCTATCACCAGGACC+AGG | 0.632824 | 7_2:-52779041 | None:intergenic |
| GAAGATGATGATGACATGCA+TGG | 0.637958 | 7_2:-52777745 | None:intergenic |
| AGTGCTGCTAAGAGATTAGG+TGG | 0.639649 | 7_2:+52778492 | Msa1062160:CDS |
| TGTTGTGGAGGTACAATGAG+AGG | 0.642005 | 7_2:-52778747 | None:intergenic |
| GTCCTGGTGATAGGTTGATG+AGG | 0.656286 | 7_2:+52779045 | Msa1062160:CDS |
| GCTGCTAAGAGATTAGGTGG+TGG | 0.661001 | 7_2:+52778495 | Msa1062160:CDS |
| ATGTACTTGCTAGAGAACAC+TGG | 0.672784 | 7_2:+52780242 | Msa1062160:CDS |
| AATTCTGTGTCTGTATGGTG+GGG | 0.675933 | 7_2:-52779355 | None:intergenic |
| TTGGAATCAAATCATTCGTG+GGG | 0.679978 | 7_2:+52778888 | Msa1062160:CDS |
| GATGAATTAGGTGCATGTGA+TGG | 0.687203 | 7_2:+52778360 | Msa1062160:CDS |
| ATTGGCAGACTATGACTGGT+GGG | 0.691493 | 7_2:+52779267 | Msa1062160:CDS |
| CCACTTGCAAGATTAGGTGG+TGG | 0.698327 | 7_2:+52779185 | Msa1062160:CDS |
| TATTGGCAGACTATGACTGG+TGG | 0.706224 | 7_2:+52779266 | Msa1062160:CDS |
| ACCGCAACAAGTGAATATCG+AGG | 0.707077 | 7_2:+52778278 | Msa1062160:CDS |
| ATATATTCTGATGTGAAGTG+TGG | 0.723007 | 7_2:+52780396 | Msa1062160:CDS |
| AAAGTGATGTGGGAAGTCTG+GGG | 0.734540 | 7_2:+52779864 | Msa1062160:CDS |
| CAGACACAGAATTCTCACCA+GGG | 0.761167 | 7_2:+52779365 | Msa1062160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGTATAAGTTTTAAATTA+TGG | + | chr7_2:52779537-52779556 | Msa1062160:intron | 10.0% |
| !!! | TTTTTCTTACTTAATTTTTA+TGG | + | chr7_2:52780450-52780469 | Msa1062160:CDS | 10.0% |
| !!! | AGAAAATCAATAATTACTTT+TGG | - | chr7_2:52779902-52779921 | None:intergenic | 15.0% |
| !!! | TATATTTCTTTTCATTTTGT+AGG | + | chr7_2:52780327-52780346 | Msa1062160:intron | 15.0% |
| !! | GACAATTATAATTGATTGAT+CGG | - | chr7_2:52779716-52779735 | None:intergenic | 20.0% |
| !! | GAAAAAAACATTATAAGAGA+AGG | - | chr7_2:52780436-52780455 | None:intergenic | 20.0% |
| ! | GAAATTTAGCAGAAGAAAAT+TGG | + | chr7_2:52777620-52777639 | Msa1062160:CDS | 25.0% |
| ! | AATACTACAAATGATCAAGA+TGG | + | chr7_2:52777649-52777668 | Msa1062160:CDS | 25.0% |
| ! | AGTAACATGCTTCAAAAAAA+TGG | + | chr7_2:52777916-52777935 | Msa1062160:CDS | 25.0% |
| ! | CATGTATTAGATTATCATCA+TGG | + | chr7_2:52777940-52777959 | Msa1062160:CDS | 25.0% |
| !! | GTTAACATTATGGATACTTT+TGG | + | chr7_2:52778081-52778100 | Msa1062160:CDS | 25.0% |
| ! | AGGTAATATTGTGTTAATGT+TGG | - | chr7_2:52778607-52778626 | None:intergenic | 25.0% |
| ! | AAACTACAATCAATCATTTG+CGG | + | chr7_2:52778935-52778954 | Msa1062160:CDS | 25.0% |
| ! | ATAATTGATTGATCGGATAA+TGG | - | chr7_2:52779709-52779728 | None:intergenic | 25.0% |
| ! | AGATGGAATTTCAATTACAA+TGG | + | chr7_2:52780032-52780051 | Msa1062160:CDS | 25.0% |
| !!! | TCTTTTCGATTATTTCTTCT+TGG | + | chr7_2:52780186-52780205 | Msa1062160:intron | 25.0% |
| GTAAATGAAACAGAACAAGT+TGG | + | chr7_2:52777592-52777611 | Msa1062160:CDS | 30.0% | |
| GATGTTGAAGTAGATAATCA+AGG | + | chr7_2:52777889-52777908 | Msa1062160:CDS | 30.0% | |
| TCGAATAATGATGTTGTTGT+TGG | + | chr7_2:52778036-52778055 | Msa1062160:CDS | 30.0% | |
| ! | AATAATGATGTTGTTGTTGG+TGG | + | chr7_2:52778039-52778058 | Msa1062160:CDS | 30.0% |
| CATGGATGATGTTAACATTA+TGG | + | chr7_2:52778071-52778090 | Msa1062160:CDS | 30.0% | |
| !! | TATGGATACTTTTGGTTACA+TGG | + | chr7_2:52778089-52778108 | Msa1062160:CDS | 30.0% |
| !! | CATTTTGAAAAATCGAAGCA+GGG | - | chr7_2:52778143-52778162 | None:intergenic | 30.0% |
| !! | TCATTTTGAAAAATCGAAGC+AGG | - | chr7_2:52778144-52778163 | None:intergenic | 30.0% |
| AGTATTCAAGGAGATGAATT+AGG | + | chr7_2:52778348-52778367 | Msa1062160:CDS | 30.0% | |
| TGTAAGTGATGAAATGAGTA+TGG | + | chr7_2:52778383-52778402 | Msa1062160:CDS | 30.0% | |
| ! | TGAAATGAGTATGGTTTTCT+TGG | + | chr7_2:52778392-52778411 | Msa1062160:CDS | 30.0% |
| ATCTAACAAAGATAGTGTCT+CGG | + | chr7_2:52778425-52778444 | Msa1062160:CDS | 30.0% | |
| TGTTGAAGCTTATTCTTGAA+TGG | + | chr7_2:52778538-52778557 | Msa1062160:CDS | 30.0% | |
| GTTGAAGCTTATTCTTGAAT+GGG | + | chr7_2:52778539-52778558 | Msa1062160:CDS | 30.0% | |
| CTAGTCATCTTCAAAACAAA+AGG | + | chr7_2:52778568-52778587 | Msa1062160:CDS | 30.0% | |
| ATTGGTTGTGAAAATTGTTG+TGG | - | chr7_2:52778765-52778784 | None:intergenic | 30.0% | |
| ! | ACAACAATTTTCACAACCAA+TGG | + | chr7_2:52778764-52778783 | Msa1062160:CDS | 30.0% |
| TACTAATGACTATCACATGT+TGG | + | chr7_2:52778869-52778888 | Msa1062160:CDS | 30.0% | |
| GCAAATGATTGATTGTAGTT+TGG | - | chr7_2:52778936-52778955 | None:intergenic | 30.0% | |
| ! | CAAACTCATGGTATGAATTT+TGG | + | chr7_2:52778981-52779000 | Msa1062160:CDS | 30.0% |
| ! | AATTCTTATCAGTTGTTTCC+TGG | + | chr7_2:52779023-52779042 | Msa1062160:CDS | 30.0% |
| AACCATCATCAGAATATTCA+AGG | + | chr7_2:52779155-52779174 | Msa1062160:CDS | 30.0% | |
| AACCTTGAATATTCTGATGA+TGG | - | chr7_2:52779160-52779179 | None:intergenic | 30.0% | |
| GATAAATATGACCACAATTG+TGG | - | chr7_2:52779625-52779644 | None:intergenic | 30.0% | |
| CATATTTATCCATTTGTCTG+CGG | + | chr7_2:52779635-52779654 | Msa1062160:intron | 30.0% | |
| TGTTGATGCATTTGATTGAT+AGG | + | chr7_2:52779790-52779809 | Msa1062160:intron | 30.0% | |
| GTTGATGCATTTGATTGATA+GGG | + | chr7_2:52779791-52779810 | Msa1062160:intron | 30.0% | |
| ATTGCAAAAACATCAGAAAG+AGG | + | chr7_2:52779978-52779997 | Msa1062160:intron | 30.0% | |
| TCAATTACAATGGAAGACAT+TGG | + | chr7_2:52780042-52780061 | Msa1062160:CDS | 30.0% | |
| GAGTCATTCTTCTTATTCAT+TGG | + | chr7_2:52780266-52780285 | Msa1062160:intron | 30.0% | |
| ATATATTCTGATGTGAAGTG+TGG | + | chr7_2:52780396-52780415 | Msa1062160:CDS | 30.0% | |
| TTTAGATCTGCATGCAAAGT+TGG | + | chr7_2:52777570-52777589 | Msa1062160:CDS | 35.0% | |
| !!! | GAAACAGAACAAGTTGGTTT+TGG | + | chr7_2:52777598-52777617 | Msa1062160:CDS | 35.0% |
| ATGCATGGAAAATCAGGTAA+AGG | - | chr7_2:52777733-52777752 | None:intergenic | 35.0% | |
| ! | GTACATGCAATGGTTTTCAA+TGG | - | chr7_2:52777790-52777809 | None:intergenic | 35.0% |
| TGTAGTTGAAGTACATGCAA+TGG | - | chr7_2:52777800-52777819 | None:intergenic | 35.0% | |
| TTTGTCATCAACTGCTTCTA+TGG | + | chr7_2:52777978-52777997 | Msa1062160:CDS | 35.0% | |
| TGAAGATGAAAACCCTTTAG+TGG | + | chr7_2:52778161-52778180 | Msa1062160:CDS | 35.0% | |
| CTTGTGTGAAATCCACTAAA+GGG | - | chr7_2:52778176-52778195 | None:intergenic | 35.0% | |
| TCTTGTGTGAAATCCACTAA+AGG | - | chr7_2:52778177-52778196 | None:intergenic | 35.0% | |
| CTATCATCATGCACTATCAT+CGG | - | chr7_2:52778249-52778268 | None:intergenic | 35.0% | |
| ! | GATGATAGTGCATGATGATA+GGG | + | chr7_2:52778248-52778267 | Msa1062160:CDS | 35.0% |
| TGTTGAGGAACAAGATTTGA+AGG | - | chr7_2:52778627-52778646 | None:intergenic | 35.0% | |
| ! | TCTTGAAACTGTTGTTGTTG+AGG | - | chr7_2:52778642-52778661 | None:intergenic | 35.0% |
| !!! | CAAATGTGTTTGCTGTGTTT+TGG | - | chr7_2:52778677-52778696 | None:intergenic | 35.0% |
| TTTGATCTAGCCATGATGTT+TGG | - | chr7_2:52778725-52778744 | None:intergenic | 35.0% | |
| ! | CAATTTTCACAACCAATGGT+TGG | + | chr7_2:52778768-52778787 | Msa1062160:CDS | 35.0% |
| GAAACAGAACCATTTGTGTA+AGG | - | chr7_2:52778819-52778838 | None:intergenic | 35.0% | |
| TGTTGGAATCAAATCATTCG+TGG | + | chr7_2:52778886-52778905 | Msa1062160:CDS | 35.0% | |
| GTTGGAATCAAATCATTCGT+GGG | + | chr7_2:52778887-52778906 | Msa1062160:CDS | 35.0% | |
| TTGGAATCAAATCATTCGTG+GGG | + | chr7_2:52778888-52778907 | Msa1062160:CDS | 35.0% | |
| ! | ACTCATGGTATGAATTTTGG+AGG | + | chr7_2:52778984-52779003 | Msa1062160:CDS | 35.0% |
| !! | GGTATGAATTTTGGAGGTTA+TGG | + | chr7_2:52778990-52779009 | Msa1062160:CDS | 35.0% |
| CAAAAGAAGCTAGAAAGAAG+AGG | + | chr7_2:52779084-52779103 | Msa1062160:CDS | 35.0% | |
| CAATTGTGGCTGCAATATAA+TGG | + | chr7_2:52779570-52779589 | Msa1062160:intron | 35.0% | |
| ATGCATTTGATTGATAGGGT+TGG | + | chr7_2:52779795-52779814 | Msa1062160:intron | 35.0% | |
| ! | GCTTCAAAACCTTTTGTAGA+AGG | - | chr7_2:52779844-52779863 | None:intergenic | 35.0% |
| !!! | GTTTTGAAGCAAAGTGATGT+GGG | + | chr7_2:52779854-52779873 | Msa1062160:CDS | 35.0% |
| AGAAACACATTTGCCAGAAT+TGG | + | chr7_2:52780002-52780021 | Msa1062160:CDS | 35.0% | |
| ! | GTGTTTGGAATATGCGATAT+AGG | + | chr7_2:52780073-52780092 | Msa1062160:CDS | 35.0% |
| !!! | TACATCCTGCTTTTGTTGTT+TGG | - | chr7_2:52780227-52780246 | None:intergenic | 35.0% |
| ! | TTTTGTAGGTGACTTTGTGA+AGG | + | chr7_2:52780341-52780360 | Msa1062160:intron | 35.0% |
| TCACTATGAAATCTCCTTCT+TGG | - | chr7_2:52780377-52780396 | None:intergenic | 35.0% | |
| GATCAAGATGGTGATCTCTT+AGG | + | chr7_2:52777661-52777680 | Msa1062160:CDS | 40.0% | |
| CATGGAAAATCAGGTAAAGG+TGG | - | chr7_2:52777730-52777749 | None:intergenic | 40.0% | |
| GATGACATGCATGGAAAATC+AGG | - | chr7_2:52777739-52777758 | None:intergenic | 40.0% | |
| ! | GAAGATGATGATGACATGCA+TGG | - | chr7_2:52777748-52777767 | None:intergenic | 40.0% |
| TTCTTCATCTGCAGCTTCTT+GGG | + | chr7_2:52777852-52777871 | Msa1062160:CDS | 40.0% | |
| !! | GTTGATGACAAAGTTGTTGG+AGG | - | chr7_2:52777970-52777989 | None:intergenic | 40.0% |
| !! | GCAGTTGATGACAAAGTTGT+TGG | - | chr7_2:52777973-52777992 | None:intergenic | 40.0% |
| CAACAACAGCAACAAGATCT+TGG | + | chr7_2:52778009-52778028 | Msa1062160:CDS | 40.0% | |
| ! | AATGATGTTGTTGTTGGTGG+TGG | + | chr7_2:52778042-52778061 | Msa1062160:CDS | 40.0% |
| CAACAAGTTCAAGTGCAAGA+GGG | + | chr7_2:52778198-52778217 | Msa1062160:CDS | 40.0% | |
| AACAAGTTCAAGTGCAAGAG+GGG | + | chr7_2:52778199-52778218 | Msa1062160:CDS | 40.0% | |
| ! | CGATGATAGTGCATGATGAT+AGG | + | chr7_2:52778247-52778266 | Msa1062160:CDS | 40.0% |
| ! | TCCTCGATATTCACTTGTTG+CGG | - | chr7_2:52778282-52778301 | None:intergenic | 40.0% |
| !! | GACGATGTTTTTGTGTGTGA+CGG | + | chr7_2:52778309-52778328 | Msa1062160:CDS | 40.0% |
| TTTGTGTGTGACGGTGTAAA+TGG | + | chr7_2:52778318-52778337 | Msa1062160:CDS | 40.0% | |
| TTGTGTGTGACGGTGTAAAT+GGG | + | chr7_2:52778319-52778338 | Msa1062160:CDS | 40.0% | |
| !! | AATGGGGAAGAGAGTATTCA+AGG | + | chr7_2:52778336-52778355 | Msa1062160:CDS | 40.0% |
| GATGAATTAGGTGCATGTGA+TGG | + | chr7_2:52778360-52778379 | Msa1062160:CDS | 40.0% | |
| ! | TGAGTATGGTTTTCTTGGAG+TGG | + | chr7_2:52778397-52778416 | Msa1062160:CDS | 40.0% |
| !! | GAAAGTGCTGCTAAGAGATT+AGG | + | chr7_2:52778489-52778508 | Msa1062160:CDS | 40.0% |
| !! | AGATTAGGTGGTGGAAAAGA+AGG | + | chr7_2:52778504-52778523 | Msa1062160:CDS | 40.0% |
| !! | GATTAGGTGGTGGAAAAGAA+GGG | + | chr7_2:52778505-52778524 | Msa1062160:CDS | 40.0% |
| TTGAAACACGCATTCGATTC+AGG | - | chr7_2:52778702-52778721 | None:intergenic | 40.0% | |
| CGTGTTTCAACCAAACATCA+TGG | + | chr7_2:52778712-52778731 | Msa1062160:CDS | 40.0% | |
| GGTTGTGAAAATTGTTGTGG+AGG | - | chr7_2:52778762-52778781 | None:intergenic | 40.0% | |
| GTTGCTGATCCTTACACAAA+TGG | + | chr7_2:52778807-52778826 | Msa1062160:CDS | 40.0% | |
| TGATAGTCATTAGTAGCAGC+AGG | - | chr7_2:52778864-52778883 | None:intergenic | 40.0% | |
| AGCAATGTGCTACAAACTCA+TGG | + | chr7_2:52778969-52778988 | Msa1062160:CDS | 40.0% | |
| ! | CTAGCTTCTTTTGTAGCAGA+AGG | - | chr7_2:52779077-52779096 | None:intergenic | 40.0% |
| AGAAGCTAGAAAGAAGAGGA+TGG | + | chr7_2:52779088-52779107 | Msa1062160:CDS | 40.0% | |
| TCTGATCCACTTGCAAGATT+AGG | + | chr7_2:52779179-52779198 | Msa1062160:CDS | 40.0% | |
| CTCATACAAATCCAGGTAAC+TGG | + | chr7_2:52779240-52779259 | Msa1062160:CDS | 40.0% | |
| ATCCAGGTAACTGGATGTAT+TGG | + | chr7_2:52779249-52779268 | Msa1062160:CDS | 40.0% | |
| ! | ATGTATTGGCAGACTATGAC+TGG | + | chr7_2:52779263-52779282 | Msa1062160:CDS | 40.0% |
| AATTCTGTGTCTGTATGGTG+GGG | - | chr7_2:52779358-52779377 | None:intergenic | 40.0% | |
| GAATTCTGTGTCTGTATGGT+GGG | - | chr7_2:52779359-52779378 | None:intergenic | 40.0% | |
| AGAATTCTGTGTCTGTATGG+TGG | - | chr7_2:52779360-52779379 | None:intergenic | 40.0% | |
| GTGAGAATTCTGTGTCTGTA+TGG | - | chr7_2:52779363-52779382 | None:intergenic | 40.0% | |
| ATGGTCAACAACTGCAATTG+TGG | + | chr7_2:52779556-52779575 | Msa1062160:intron | 40.0% | |
| CTGCGGATATCGTAGTATAA+TGG | + | chr7_2:52779652-52779671 | Msa1062160:intron | 40.0% | |
| ! | AGGAACCTCAAGTTCTTTTC+AGG | - | chr7_2:52779824-52779843 | None:intergenic | 40.0% |
| CTTGAGGTTCCTTCTACAAA+AGG | + | chr7_2:52779832-52779851 | Msa1062160:CDS | 40.0% | |
| !!! | GGTTTTGAAGCAAAGTGATG+TGG | + | chr7_2:52779853-52779872 | Msa1062160:CDS | 40.0% |
| AACACATTTGCCAGAATTGG+AGG | + | chr7_2:52780005-52780024 | Msa1062160:CDS | 40.0% | |
| ACATTGGAACTTCTCGTGTT+TGG | + | chr7_2:52780058-52780077 | Msa1062160:CDS | 40.0% | |
| ! | CTTCTTGGAGCATCAGATAT+TGG | + | chr7_2:52780201-52780220 | Msa1062160:intron | 40.0% |
| ATTGGCCAAACAACAAAAGC+AGG | + | chr7_2:52780219-52780238 | Msa1062160:CDS | 40.0% | |
| ! | ATGTACTTGCTAGAGAACAC+TGG | + | chr7_2:52780242-52780261 | Msa1062160:CDS | 40.0% |
| ACTAGCAGAGGAAGAAGAAG+AGG | - | chr7_2:52777833-52777852 | None:intergenic | 45.0% | |
| TGCAGATGAAGAACTAGCAG+AGG | - | chr7_2:52777845-52777864 | None:intergenic | 45.0% | |
| GTTCTTCATCTGCAGCTTCT+TGG | + | chr7_2:52777851-52777870 | Msa1062160:CDS | 45.0% | |
| GCAACAAGTTCAAGTGCAAG+AGG | + | chr7_2:52778197-52778216 | Msa1062160:CDS | 45.0% | |
| ACCGCAACAAGTGAATATCG+AGG | + | chr7_2:52778278-52778297 | Msa1062160:CDS | 45.0% | |
| TGTGTGTGACGGTGTAAATG+GGG | + | chr7_2:52778320-52778339 | Msa1062160:CDS | 45.0% | |
| GTGTCTCGGCAAATGATTTG+AGG | + | chr7_2:52778439-52778458 | Msa1062160:CDS | 45.0% | |
| ! | AGTGCTGCTAAGAGATTAGG+TGG | + | chr7_2:52778492-52778511 | Msa1062160:CDS | 45.0% |
| !!! | GCTGTGTTTTGGTTCTGACA+TGG | - | chr7_2:52778666-52778685 | None:intergenic | 45.0% |
| ! | TGTTGTGGAGGTACAATGAG+AGG | - | chr7_2:52778750-52778769 | None:intergenic | 45.0% |
| TCACAACCAATGGTTGGAGT+TGG | + | chr7_2:52778774-52778793 | Msa1062160:CDS | 45.0% | |
| !! | TAGTAGCAGCAGGTTGGTAA+GGG | - | chr7_2:52778854-52778873 | None:intergenic | 45.0% |
| !! | TTAGTAGCAGCAGGTTGGTA+AGG | - | chr7_2:52778855-52778874 | None:intergenic | 45.0% |
| AGTCATTAGTAGCAGCAGGT+TGG | - | chr7_2:52778860-52778879 | None:intergenic | 45.0% | |
| ! | TATCAGTTGTTTCCTGGTCC+TGG | + | chr7_2:52779029-52779048 | Msa1062160:CDS | 45.0% |
| AACCTCATCAACCTATCACC+AGG | - | chr7_2:52779050-52779069 | None:intergenic | 45.0% | |
| !! | GGTGATAGGTTGATGAGGTT+AGG | + | chr7_2:52779050-52779069 | Msa1062160:CDS | 45.0% |
| CTAGAAAGAAGAGGATGGCT+CGG | + | chr7_2:52779093-52779112 | Msa1062160:CDS | 45.0% | |
| GGCGGTTTATGTCTCATCAT+AGG | + | chr7_2:52779120-52779139 | Msa1062160:CDS | 45.0% | |
| GATCCACTTGCAAGATTAGG+TGG | + | chr7_2:52779182-52779201 | Msa1062160:CDS | 45.0% | |
| AATTGCACCAATGTTGCTGC+TGG | + | chr7_2:52779212-52779231 | Msa1062160:CDS | 45.0% | |
| GGTGGTTCTCATACAAATCC+AGG | + | chr7_2:52779233-52779252 | Msa1062160:CDS | 45.0% | |
| TGCCAATACATCCAGTTACC+TGG | - | chr7_2:52779254-52779273 | None:intergenic | 45.0% | |
| TATTGGCAGACTATGACTGG+TGG | + | chr7_2:52779266-52779285 | Msa1062160:CDS | 45.0% | |
| ATTGGCAGACTATGACTGGT+GGG | + | chr7_2:52779267-52779286 | Msa1062160:CDS | 45.0% | |
| ACAGACACAGAATTCTCACC+AGG | + | chr7_2:52779364-52779383 | Msa1062160:CDS | 45.0% | |
| CAGACACAGAATTCTCACCA+GGG | + | chr7_2:52779365-52779384 | Msa1062160:CDS | 45.0% | |
| TCCACAAACCTGTCTCCTAT+CGG | - | chr7_2:52779402-52779421 | None:intergenic | 45.0% | |
| !! | TGGCTTTAGAAGTCTCTGCA+AGG | + | chr7_2:52779590-52779609 | Msa1062160:intron | 45.0% |
| !! | GGCTTTAGAAGTCTCTGCAA+GGG | + | chr7_2:52779591-52779610 | Msa1062160:intron | 45.0% |
| CTACGATATCCGCAGACAAA+TGG | - | chr7_2:52779647-52779666 | None:intergenic | 45.0% | |
| GGAAGCCTGAAAAGAACTTG+AGG | + | chr7_2:52779816-52779835 | Msa1062160:CDS | 45.0% | |
| CAAAGTGATGTGGGAAGTCT+GGG | + | chr7_2:52779863-52779882 | Msa1062160:CDS | 45.0% | |
| AAAGTGATGTGGGAAGTCTG+GGG | + | chr7_2:52779864-52779883 | Msa1062160:CDS | 45.0% | |
| GGTGACTTTGTGAAGGCTAA+TGG | + | chr7_2:52780348-52780367 | Msa1062160:intron | 45.0% | |
| !! | AAGGCTAATGGACTCCAAGA+AGG | + | chr7_2:52780360-52780379 | Msa1062160:CDS | 45.0% |
| !! | TGTTGGTGGTGGTGATTGCA+TGG | + | chr7_2:52778053-52778072 | Msa1062160:CDS | 50.0% |
| GCTGCTAAGAGATTAGGTGG+TGG | + | chr7_2:52778495-52778514 | Msa1062160:CDS | 50.0% | |
| CCAACTCCAACTCCAACCAT+TGG | - | chr7_2:52778783-52778802 | None:intergenic | 50.0% | |
| CCAATGGTTGGAGTTGGAGT+TGG | + | chr7_2:52778780-52778799 | Msa1062160:CDS | 50.0% | |
| TGTTTCCTGGTCCTGGTGAT+AGG | + | chr7_2:52779036-52779055 | Msa1062160:CDS | 50.0% | |
| ATCAACCTATCACCAGGACC+AGG | - | chr7_2:52779044-52779063 | None:intergenic | 50.0% | |
| !! | GTCCTGGTGATAGGTTGATG+AGG | + | chr7_2:52779045-52779064 | Msa1062160:CDS | 50.0% |
| CCACCACCTAATCTTGCAAG+TGG | - | chr7_2:52779188-52779207 | None:intergenic | 50.0% | |
| CCACTTGCAAGATTAGGTGG+TGG | + | chr7_2:52779185-52779204 | Msa1062160:CDS | 50.0% | |
| AGAACCACCAGCAGCAACAT+TGG | - | chr7_2:52779222-52779241 | None:intergenic | 50.0% | |
| TTCCTTGGCTCCTGTTGTTC+CGG | + | chr7_2:52779298-52779317 | Msa1062160:CDS | 50.0% | |
| CCACAAACCTGTCTCCTATC+GGG | - | chr7_2:52779401-52779420 | None:intergenic | 50.0% | |
| GGGCATAGCAACCACAATTG+TGG | + | chr7_2:52779611-52779630 | Msa1062160:intron | 50.0% | |
| GCAAAGTGATGTGGGAAGTC+TGG | + | chr7_2:52779862-52779881 | Msa1062160:CDS | 50.0% | |
| CCATCTCTTGCCTCCAATTC+TGG | - | chr7_2:52780018-52780037 | None:intergenic | 50.0% | |
| CCAGAATTGGAGGCAAGAGA+TGG | + | chr7_2:52780015-52780034 | Msa1062160:CDS | 50.0% | |
| ! | AGAAGAGGATGGCTCGGCAA+CGG | + | chr7_2:52779099-52779118 | Msa1062160:CDS | 55.0% |
| TGCACCAATGTTGCTGCTGG+TGG | + | chr7_2:52779215-52779234 | Msa1062160:CDS | 55.0% | |
| GTCTCCTATCGGGTGCACTT+CGG | - | chr7_2:52779391-52779410 | None:intergenic | 55.0% | |
| AAGTGCACCCGATAGGAGAC+AGG | + | chr7_2:52779391-52779410 | Msa1062160:CDS | 55.0% | |
| CCCGATAGGAGACAGGTTTG+TGG | + | chr7_2:52779398-52779417 | Msa1062160:intron | 55.0% | |
| TGGTGGGACAGCAGCTTCCT+TGG | + | chr7_2:52779283-52779302 | Msa1062160:CDS | 60.0% | |
| AGCCGGAACAACAGGAGCCA+AGG | - | chr7_2:52779303-52779322 | None:intergenic | 60.0% | |
| CGATCTACTGCAGGCTGCGT+CGG | - | chr7_2:52779329-52779348 | None:intergenic | 60.0% | |
| GGGCGATCACGATCTACTGC+AGG | - | chr7_2:52779338-52779357 | None:intergenic | 60.0% | |
| ! | AGAGGATGGCTCGGCAACGG+CGG | + | chr7_2:52779102-52779121 | Msa1062160:CDS | 65.0% |
| ! | GTCGGCTCAGCCGGAACAAC+AGG | - | chr7_2:52779311-52779330 | None:intergenic | 65.0% |
| TATCGGGTGCACTTCGGCCC+TGG | - | chr7_2:52779385-52779404 | None:intergenic | 65.0% | |
| AGGGCCGAAGTGCACCCGAT+AGG | + | chr7_2:52779384-52779403 | Msa1062160:CDS | 65.0% | |
| !! | GCAGGCTGCGTCGGCTCAGC+CGG | - | chr7_2:52779320-52779339 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 52777559 | 52780494 | 52777559 | ID=Msa1062160;Name=Msa1062160 |
| chr7_2 | mRNA | 52777559 | 52780494 | 52777559 | ID=Msa1062160-mRNA-1;Parent=Msa1062160;Name=Msa1062160-mRNA-1;_AED=0.03;_eAED=0.04;_QI=0|0|0|1|1|1|5|0|746 |
| chr7_2 | exon | 52777559 | 52779412 | 52777559 | ID=Msa1062160-mRNA-1:exon:9514;Parent=Msa1062160-mRNA-1 |
| chr7_2 | exon | 52779812 | 52779904 | 52779812 | ID=Msa1062160-mRNA-1:exon:9515;Parent=Msa1062160-mRNA-1 |
| chr7_2 | exon | 52779994 | 52780094 | 52779994 | ID=Msa1062160-mRNA-1:exon:9516;Parent=Msa1062160-mRNA-1 |
| chr7_2 | exon | 52780217 | 52780263 | 52780217 | ID=Msa1062160-mRNA-1:exon:9517;Parent=Msa1062160-mRNA-1 |
| chr7_2 | exon | 52780349 | 52780494 | 52780349 | ID=Msa1062160-mRNA-1:exon:9518;Parent=Msa1062160-mRNA-1 |
| chr7_2 | CDS | 52777559 | 52779412 | 52777559 | ID=Msa1062160-mRNA-1:cds;Parent=Msa1062160-mRNA-1 |
| chr7_2 | CDS | 52779812 | 52779904 | 52779812 | ID=Msa1062160-mRNA-1:cds;Parent=Msa1062160-mRNA-1 |
| chr7_2 | CDS | 52779994 | 52780094 | 52779994 | ID=Msa1062160-mRNA-1:cds;Parent=Msa1062160-mRNA-1 |
| chr7_2 | CDS | 52780217 | 52780263 | 52780217 | ID=Msa1062160-mRNA-1:cds;Parent=Msa1062160-mRNA-1 |
| chr7_2 | CDS | 52780349 | 52780494 | 52780349 | ID=Msa1062160-mRNA-1:cds;Parent=Msa1062160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
