Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1068350 | XP_039685680.1 | 84.856 | 799 | 101 | 3 | 1 | 779 | 1 | 799 | 0.0 | 1392 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1068350 | sp|Q9SZL8|FRS5_ARATH | 27.925 | 641 | 382 | 14 | 32 | 665 | 70 | 637 | 1.53e-69 | 248 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1068350 | D3YBB9 | 76.456 | 807 | 173 | 4 | 1 | 798 | 49 | 847 | 0.0 | 1283 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1068350 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1068350 | MtrunA17_Chr3g0088371 | 83.152 | 184 | 28 | 1 | 618 | 798 | 1 | 184 | 8.76e-103 | 315 |
| Msa1068350 | MtrunA17_Chr2g0324011 | 30.709 | 635 | 364 | 12 | 36 | 665 | 8 | 571 | 3.05e-101 | 325 |
| Msa1068350 | MtrunA17_Chr3g0082121 | 31.693 | 691 | 384 | 17 | 41 | 727 | 49 | 655 | 1.43e-100 | 326 |
| Msa1068350 | MtrunA17_Chr1g0202341 | 29.606 | 635 | 366 | 17 | 34 | 662 | 50 | 609 | 6.25e-80 | 271 |
| Msa1068350 | MtrunA17_Chr8g0363841 | 28.776 | 629 | 375 | 13 | 40 | 665 | 22 | 580 | 5.12e-75 | 257 |
| Msa1068350 | MtrunA17_Chr1g0203721 | 26.026 | 780 | 452 | 20 | 1 | 739 | 16 | 711 | 5.73e-73 | 256 |
| Msa1068350 | MtrunA17_Chr2g0296781 | 27.688 | 679 | 405 | 20 | 39 | 708 | 1 | 602 | 1.71e-68 | 240 |
| Msa1068350 | MtrunA17_Chr5g0448761 | 25.318 | 707 | 449 | 14 | 31 | 728 | 56 | 692 | 2.00e-68 | 241 |
| Msa1068350 | MtrunA17_Chr6g0458391 | 26.984 | 630 | 357 | 15 | 41 | 662 | 231 | 765 | 1.99e-65 | 233 |
| Msa1068350 | MtrunA17_Chr6g0477261 | 29.412 | 527 | 314 | 14 | 180 | 699 | 7 | 482 | 5.96e-65 | 229 |
| Msa1068350 | MtrunA17_Chr1g0164591 | 35.312 | 320 | 192 | 4 | 131 | 448 | 1 | 307 | 9.32e-63 | 214 |
| Msa1068350 | MtrunA17_Chr2g0287651 | 25.755 | 629 | 387 | 13 | 39 | 662 | 79 | 632 | 1.05e-60 | 221 |
| Msa1068350 | MtrunA17_Chr5g0441581 | 24.967 | 757 | 460 | 21 | 32 | 773 | 26 | 689 | 3.46e-59 | 214 |
| Msa1068350 | MtrunA17_Chr5g0440451 | 24.294 | 708 | 429 | 16 | 34 | 721 | 42 | 662 | 1.06e-55 | 207 |
| Msa1068350 | MtrunA17_Chr1g0172971 | 82.051 | 117 | 20 | 1 | 1 | 116 | 1 | 117 | 4.01e-54 | 196 |
| Msa1068350 | MtrunA17_Chr1g0207551 | 24.821 | 697 | 430 | 17 | 31 | 718 | 30 | 641 | 4.09e-54 | 201 |
| Msa1068350 | MtrunA17_Chr7g0258861 | 35.948 | 306 | 172 | 6 | 36 | 336 | 8 | 294 | 4.69e-54 | 189 |
| Msa1068350 | MtrunA17_Chr2g0329031 | 25.776 | 644 | 382 | 18 | 23 | 658 | 2 | 557 | 1.65e-53 | 198 |
| Msa1068350 | MtrunA17_Chr1g0198761 | 27.147 | 652 | 379 | 19 | 26 | 660 | 38 | 610 | 4.72e-53 | 197 |
| Msa1068350 | MtrunA17_Chr1g0196541 | 24.880 | 627 | 397 | 16 | 39 | 662 | 1 | 556 | 2.73e-52 | 194 |
| Msa1068350 | MtrunA17_Chr3g0118611 | 27.634 | 503 | 304 | 10 | 221 | 719 | 111 | 557 | 3.04e-52 | 195 |
| Msa1068350 | MtrunA17_Chr3g0080351 | 23.724 | 725 | 449 | 15 | 34 | 752 | 75 | 701 | 1.13e-48 | 185 |
| Msa1068350 | MtrunA17_Chr2g0287061 | 24.066 | 669 | 377 | 19 | 41 | 694 | 189 | 741 | 5.12e-48 | 182 |
| Msa1068350 | MtrunA17_Chr2g0290391 | 26.012 | 642 | 372 | 19 | 38 | 660 | 54 | 611 | 2.58e-47 | 179 |
| Msa1068350 | MtrunA17_Chr1g0203051 | 22.373 | 590 | 389 | 8 | 50 | 637 | 94 | 616 | 8.43e-47 | 177 |
| Msa1068350 | MtrunA17_Chr2g0276841 | 25.984 | 635 | 374 | 21 | 49 | 669 | 84 | 636 | 3.91e-45 | 173 |
| Msa1068350 | MtrunA17_Chr5g0448511 | 25.664 | 452 | 282 | 10 | 216 | 665 | 1 | 400 | 4.04e-44 | 167 |
| Msa1068350 | MtrunA17_Chr5g0431001 | 28.160 | 451 | 279 | 12 | 40 | 473 | 66 | 488 | 2.44e-42 | 161 |
| Msa1068350 | MtrunA17_Chr2g0291591 | 25.956 | 497 | 316 | 13 | 16 | 499 | 44 | 501 | 6.93e-42 | 161 |
| Msa1068350 | MtrunA17_Chr2g0291581 | 23.923 | 627 | 396 | 14 | 38 | 662 | 74 | 621 | 6.71e-41 | 160 |
| Msa1068350 | MtrunA17_Chr6g0475591 | 91.781 | 73 | 6 | 0 | 188 | 260 | 1 | 73 | 1.35e-40 | 143 |
| Msa1068350 | MtrunA17_Chr2g0294841 | 26.640 | 503 | 316 | 15 | 3 | 482 | 7 | 479 | 1.73e-35 | 144 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1068350 | AT4G38180.1 | 27.925 | 641 | 382 | 14 | 32 | 665 | 70 | 637 | 1.55e-70 | 248 |
| Msa1068350 | AT4G15090.1 | 25.000 | 696 | 435 | 15 | 50 | 741 | 66 | 678 | 2.07e-59 | 217 |
| Msa1068350 | AT4G15090.5 | 25.000 | 696 | 435 | 15 | 50 | 741 | 66 | 678 | 2.07e-59 | 217 |
| Msa1068350 | AT4G15090.3 | 25.000 | 696 | 435 | 15 | 50 | 741 | 66 | 678 | 2.07e-59 | 217 |
| Msa1068350 | AT4G15090.2 | 25.000 | 696 | 435 | 15 | 50 | 741 | 66 | 678 | 2.07e-59 | 217 |
| Msa1068350 | AT4G15090.4 | 25.000 | 696 | 435 | 15 | 50 | 741 | 66 | 678 | 2.07e-59 | 217 |
| Msa1068350 | AT2G27110.2 | 25.070 | 714 | 423 | 19 | 10 | 719 | 29 | 634 | 1.09e-53 | 200 |
| Msa1068350 | AT2G27110.1 | 25.070 | 714 | 423 | 19 | 10 | 719 | 29 | 634 | 1.09e-53 | 200 |
| Msa1068350 | AT2G27110.3 | 27.308 | 509 | 313 | 11 | 213 | 719 | 36 | 489 | 4.79e-53 | 197 |
| Msa1068350 | AT3G06250.2 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 5.24e-52 | 194 |
| Msa1068350 | AT3G06250.1 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 5.24e-52 | 194 |
| Msa1068350 | AT3G06250.3 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 5.24e-52 | 194 |
| Msa1068350 | AT1G76320.3 | 24.815 | 677 | 413 | 19 | 50 | 720 | 12 | 598 | 4.74e-50 | 187 |
| Msa1068350 | AT1G76320.2 | 24.852 | 676 | 412 | 19 | 50 | 719 | 12 | 597 | 1.19e-49 | 187 |
| Msa1068350 | AT1G76320.1 | 24.852 | 676 | 412 | 19 | 50 | 719 | 12 | 597 | 1.52e-49 | 187 |
| Msa1068350 | AT1G76320.4 | 24.852 | 676 | 412 | 19 | 50 | 719 | 12 | 597 | 1.52e-49 | 187 |
| Msa1068350 | AT3G22170.2 | 22.466 | 730 | 449 | 17 | 34 | 753 | 69 | 691 | 1.37e-47 | 182 |
| Msa1068350 | AT3G22170.1 | 22.466 | 730 | 449 | 17 | 34 | 753 | 69 | 691 | 1.37e-47 | 182 |
| Msa1068350 | AT5G18960.2 | 24.730 | 647 | 359 | 18 | 24 | 661 | 200 | 727 | 2.75e-46 | 178 |
| Msa1068350 | AT5G18960.1 | 24.730 | 647 | 359 | 18 | 24 | 661 | 200 | 727 | 2.75e-46 | 178 |
| Msa1068350 | AT4G38170.1 | 24.532 | 481 | 295 | 13 | 235 | 703 | 24 | 448 | 8.24e-44 | 167 |
| Msa1068350 | AT1G10240.2 | 24.719 | 623 | 377 | 19 | 49 | 659 | 62 | 604 | 8.82e-42 | 163 |
| Msa1068350 | AT1G10240.1 | 24.719 | 623 | 377 | 19 | 49 | 659 | 62 | 604 | 8.82e-42 | 163 |
| Msa1068350 | AT5G28530.1 | 24.100 | 639 | 388 | 17 | 40 | 660 | 60 | 619 | 1.31e-41 | 162 |
| Msa1068350 | AT5G28530.3 | 23.944 | 639 | 385 | 18 | 40 | 660 | 60 | 615 | 7.95e-41 | 160 |
| Msa1068350 | AT5G28530.2 | 23.944 | 639 | 385 | 18 | 40 | 660 | 60 | 615 | 7.95e-41 | 160 |
| Msa1068350 | AT2G32250.5 | 23.624 | 745 | 432 | 20 | 4 | 743 | 10 | 622 | 1.12e-39 | 157 |
| Msa1068350 | AT2G32250.2 | 23.624 | 745 | 432 | 20 | 4 | 743 | 10 | 622 | 1.78e-39 | 157 |
| Msa1068350 | AT2G32250.4 | 23.624 | 745 | 432 | 20 | 4 | 743 | 10 | 622 | 1.78e-39 | 157 |
| Msa1068350 | AT2G32250.6 | 23.624 | 745 | 432 | 20 | 4 | 743 | 10 | 622 | 2.54e-39 | 157 |
| Msa1068350 | AT2G32250.1 | 23.624 | 745 | 432 | 20 | 4 | 743 | 10 | 622 | 2.54e-39 | 157 |
| Msa1068350 | AT2G32250.3 | 23.624 | 745 | 432 | 20 | 4 | 743 | 10 | 622 | 2.54e-39 | 157 |
| Msa1068350 | AT2G32250.7 | 23.588 | 708 | 407 | 18 | 41 | 743 | 3 | 581 | 1.14e-38 | 154 |
| Msa1068350 | AT2G32250.8 | 23.605 | 699 | 400 | 18 | 50 | 743 | 12 | 581 | 1.18e-38 | 154 |
| Msa1068350 | AT1G80010.1 | 23.556 | 658 | 370 | 24 | 41 | 662 | 101 | 661 | 3.74e-36 | 146 |
| Msa1068350 | AT1G52520.1 | 22.080 | 625 | 407 | 16 | 41 | 662 | 91 | 638 | 2.37e-33 | 137 |
| Msa1068350 | AT4G19990.1 | 28.731 | 268 | 184 | 4 | 219 | 483 | 106 | 369 | 2.35e-27 | 119 |
| Msa1068350 | AT4G19990.1 | 35.338 | 133 | 72 | 3 | 591 | 721 | 438 | 558 | 2.15e-12 | 71.2 |
| Msa1068350 | AT4G19990.7 | 28.731 | 268 | 184 | 4 | 219 | 483 | 177 | 440 | 2.57e-27 | 119 |
| Msa1068350 | AT4G19990.7 | 35.338 | 133 | 72 | 3 | 591 | 721 | 509 | 629 | 2.49e-12 | 71.2 |
| Msa1068350 | AT4G19990.5 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.63e-27 | 119 |
| Msa1068350 | AT4G19990.5 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.44e-12 | 71.2 |
| Msa1068350 | AT4G19990.3 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 3.17e-27 | 119 |
| Msa1068350 | AT4G19990.3 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.49e-12 | 71.2 |
| Msa1068350 | AT4G19990.4 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 3.17e-27 | 119 |
| Msa1068350 | AT4G19990.4 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.49e-12 | 71.2 |
| Msa1068350 | AT4G19990.6 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 3.34e-27 | 119 |
| Msa1068350 | AT4G19990.6 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.21e-12 | 71.2 |
| Msa1068350 | AT4G19990.2 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 3.34e-27 | 119 |
| Msa1068350 | AT4G19990.2 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.21e-12 | 71.2 |
| Msa1068350 | AT5G28530.4 | 21.781 | 629 | 352 | 20 | 40 | 660 | 60 | 556 | 1.39e-22 | 103 |
| Msa1068350 | AT5G28530.5 | 21.622 | 629 | 349 | 21 | 40 | 660 | 60 | 552 | 9.74e-22 | 100 |
Find 124 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 7_2:-63311432 | Msa1068350:CDS |
| TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 7_2:-63311741 | Msa1068350:CDS |
| AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 7_2:+63310606 | None:intergenic |
| CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 7_2:-63311474 | Msa1068350:CDS |
| CAACAAGATTATGCTCTATT+TGG | 0.198611 | 7_2:-63312525 | Msa1068350:CDS |
| TTCATTTCAGCTGCCTTTCT+TGG | 0.201003 | 7_2:-63312022 | Msa1068350:intron |
| CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 7_2:-63311989 | Msa1068350:CDS |
| TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 7_2:+63311895 | None:intergenic |
| TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 7_2:+63310612 | None:intergenic |
| AATCAGATTTCGACTACAAT+TGG | 0.318540 | 7_2:-63311700 | Msa1068350:CDS |
| TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 7_2:-63310760 | Msa1068350:CDS |
| ACCAGCCTGGTCTGTGTATA+TGG | 0.341000 | 7_2:+63311877 | None:intergenic |
| GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 7_2:+63312475 | None:intergenic |
| TTGGTTTGAATATTATCTTC+TGG | 0.345646 | 7_2:-63310363 | Msa1068350:three_prime_UTR |
| TTTGCTTCTTCCGAGCTATA+AGG | 0.345757 | 7_2:+63310544 | None:intergenic |
| GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 7_2:-63311177 | Msa1068350:CDS |
| TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 7_2:-63311600 | Msa1068350:CDS |
| CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 7_2:-63310768 | Msa1068350:CDS |
| AACAATAAATATCGGCCATT+AGG | 0.388497 | 7_2:-63312468 | Msa1068350:intron |
| ACCGAACAAACAATAAATAT+CGG | 0.389395 | 7_2:-63312476 | Msa1068350:CDS |
| TTTCAATTTATCATATCTAA+TGG | 0.390380 | 7_2:-63313388 | None:intergenic |
| GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 7_2:-63311601 | Msa1068350:CDS |
| GTCTTTAGTGCCAACATTCA+TGG | 0.395146 | 7_2:+63310884 | None:intergenic |
| TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 7_2:+63313005 | None:intergenic |
| AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 7_2:-63310620 | Msa1068350:CDS |
| TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 7_2:+63310630 | None:intergenic |
| TTCCTTCAAATACTATTATG+AGG | 0.399583 | 7_2:-63311300 | Msa1068350:CDS |
| GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 7_2:-63310735 | Msa1068350:CDS |
| TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 7_2:-63313234 | Msa1068350:CDS |
| CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 7_2:-63311052 | Msa1068350:CDS |
| GATTATGATCTTCAAACCTT+GGG | 0.413114 | 7_2:+63311129 | None:intergenic |
| ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 7_2:-63313163 | Msa1068350:CDS |
| CGATTATGATCTTCAAACCT+TGG | 0.425681 | 7_2:+63311128 | None:intergenic |
| CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 7_2:-63312828 | Msa1068350:CDS |
| AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 7_2:-63312946 | Msa1068350:CDS |
| TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 7_2:+63311884 | None:intergenic |
| GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 7_2:-63312963 | Msa1068350:CDS |
| CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 7_2:+63310951 | None:intergenic |
| CGTTATGTTTGTAACAAAGA+AGG | 0.449439 | 7_2:-63313080 | Msa1068350:CDS |
| GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 7_2:-63312798 | Msa1068350:CDS |
| ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 7_2:-63313309 | Msa1068350:CDS |
| TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 7_2:-63311810 | Msa1068350:CDS |
| GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 7_2:-63311646 | Msa1068350:CDS |
| ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 7_2:-63311051 | Msa1068350:CDS |
| AATTCTTGATTGTTATGCAT+TGG | 0.467731 | 7_2:-63310382 | Msa1068350:three_prime_UTR |
| ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 7_2:-63313114 | Msa1068350:CDS |
| GGGTTGTCACAGTCGACATT+GGG | 0.480993 | 7_2:-63311094 | Msa1068350:CDS |
| GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 7_2:-63312753 | Msa1068350:CDS |
| CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 7_2:+63311298 | None:intergenic |
| TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 7_2:+63312969 | None:intergenic |
| TTTAATTATGCATATAACAC+TGG | 0.485542 | 7_2:-63313176 | Msa1068350:CDS |
| CTGTCTGTGAACCATCTGTT+GGG | 0.487793 | 7_2:-63310659 | Msa1068350:CDS |
| TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 7_2:-63312685 | Msa1068350:CDS |
| CTCAAGTAGCACAAATGCTC+TGG | 0.489977 | 7_2:+63312858 | None:intergenic |
| CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 7_2:-63313120 | Msa1068350:CDS |
| TATGAGGAGGACACAACAAA+AGG | 0.490908 | 7_2:-63311284 | Msa1068350:CDS |
| ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 7_2:+63312009 | None:intergenic |
| ATCAGATTTCGACTACAATT+GGG | 0.491708 | 7_2:-63311699 | Msa1068350:CDS |
| CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 7_2:-63312672 | Msa1068350:CDS |
| ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 7_2:-63311460 | Msa1068350:CDS |
| GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 7_2:+63311380 | None:intergenic |
| GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 7_2:-63312766 | Msa1068350:CDS |
| TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 7_2:+63312580 | None:intergenic |
| GCTGTCTGTGAACCATCTGT+TGG | 0.504047 | 7_2:-63310660 | Msa1068350:CDS |
| AAATGCTCTGGTTTATGTAA+TGG | 0.504865 | 7_2:+63312870 | None:intergenic |
| CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 7_2:-63311613 | Msa1068350:CDS |
| ATCATAATCGACTTGATGAA+AGG | 0.507955 | 7_2:-63311115 | Msa1068350:CDS |
| TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 7_2:+63312714 | None:intergenic |
| GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 7_2:-63311441 | Msa1068350:CDS |
| ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 7_2:-63311595 | Msa1068350:CDS |
| TGTCTATAAGATATATAAGT+GGG | 0.514682 | 7_2:-63312910 | Msa1068350:CDS |
| GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 7_2:+63311135 | None:intergenic |
| TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 7_2:+63311492 | None:intergenic |
| TAACAAAGAAGGTTTCAAGA+AGG | 0.525236 | 7_2:-63313069 | Msa1068350:CDS |
| TCATAATCGACTTGATGAAA+GGG | 0.526860 | 7_2:-63311114 | Msa1068350:CDS |
| CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 7_2:+63311303 | None:intergenic |
| GACAGAAATTCCTTATAGCT+CGG | 0.533906 | 7_2:-63310554 | Msa1068350:CDS |
| AGGGTTGTCACAGTCGACAT+TGG | 0.538587 | 7_2:-63311095 | Msa1068350:CDS |
| AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 7_2:+63311497 | None:intergenic |
| ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 7_2:-63311283 | Msa1068350:CDS |
| AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 7_2:-63313068 | Msa1068350:CDS |
| CATTTAGTGATAAAGAATCA+TGG | 0.546005 | 7_2:-63313244 | Msa1068350:CDS |
| ACTTCAACAACGCACCAGCC+TGG | 0.557139 | 7_2:+63311864 | None:intergenic |
| CTGAAATCCACCATGAATGT+TGG | 0.557140 | 7_2:-63310894 | Msa1068350:CDS |
| AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 7_2:-63312618 | Msa1068350:CDS |
| TGAAAATTCAGTTATTGATG+CGG | 0.565546 | 7_2:-63313285 | Msa1068350:CDS |
| GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 7_2:-63312750 | Msa1068350:CDS |
| TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 7_2:-63310808 | Msa1068350:CDS |
| ATGTCTATAAGATATATAAG+TGG | 0.572287 | 7_2:-63312911 | Msa1068350:CDS |
| GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 7_2:+63311379 | None:intergenic |
| TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 7_2:+63310648 | None:intergenic |
| GAAGCAAAAGAAAGATGATG+AGG | 0.585686 | 7_2:-63310529 | Msa1068350:CDS |
| TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 7_2:+63311358 | None:intergenic |
| ATATTAACTTCATCTGAGAG+TGG | 0.588105 | 7_2:-63313320 | Msa1068350:CDS |
| TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 7_2:-63312759 | Msa1068350:CDS |
| TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 7_2:-63310767 | Msa1068350:CDS |
| ACCATATACACAGACCAGGC+TGG | 0.590176 | 7_2:-63311878 | Msa1068350:CDS |
| ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 7_2:-63310772 | Msa1068350:CDS |
| GAGGCTTTAACAAATTAAGC+GGG | 0.594536 | 7_2:-63310510 | Msa1068350:exon |
| TTGAAGAAAACCTTTCCCCA+AGG | 0.594796 | 7_2:-63311145 | Msa1068350:CDS |
| TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 7_2:+63310692 | None:intergenic |
| GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 7_2:-63312679 | Msa1068350:CDS |
| AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 7_2:-63312765 | Msa1068350:CDS |
| AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 7_2:-63312676 | Msa1068350:CDS |
| ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 7_2:-63310805 | Msa1068350:CDS |
| ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 7_2:-63311382 | Msa1068350:CDS |
| CTTCAAATACTATTATGAGG+AGG | 0.607664 | 7_2:-63311297 | Msa1068350:CDS |
| TTGATATCGTTGCGCTTCAG+TGG | 0.611060 | 7_2:+63310860 | None:intergenic |
| AGAACTGGACTGTCACATGT+TGG | 0.620791 | 7_2:+63313020 | None:intergenic |
| AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 7_2:+63311644 | None:intergenic |
| GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 7_2:-63312745 | Msa1068350:CDS |
| TGAGGCTTTAACAAATTAAG+CGG | 0.628414 | 7_2:-63310511 | Msa1068350:exon |
| ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 7_2:+63311130 | None:intergenic |
| GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 7_2:-63311809 | Msa1068350:CDS |
| TTTAGTGCCAACATTCATGG+TGG | 0.641441 | 7_2:+63310887 | None:intergenic |
| CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 7_2:-63311459 | Msa1068350:CDS |
| GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 7_2:+63310909 | None:intergenic |
| TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 7_2:+63311338 | None:intergenic |
| GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 7_2:-63310783 | Msa1068350:CDS |
| CATGTCGACATAAGAAACCC+CGG | 0.663279 | 7_2:+63311033 | None:intergenic |
| TCAAACCATATACACAGACC+AGG | 0.671057 | 7_2:-63311882 | Msa1068350:CDS |
| TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 7_2:-63311050 | Msa1068350:CDS |
| ATGTTGATAATGATAATGAG+AGG | 0.683310 | 7_2:-63311199 | Msa1068350:CDS |
| TGTTGATAATGATAATGAGA+GGG | 0.689129 | 7_2:-63311198 | Msa1068350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTTTTTATGTTATAAGTT+AGG | - | chr7_2:63313257-63313276 | Msa1068350:CDS | 15.0% |
| !! | TTTAATTATGCATATAACAC+TGG | - | chr7_2:63310561-63310580 | Msa1068350:CDS | 20.0% |
| !! | CAATTCACAAAATAAGAAAT+CGG | - | chr7_2:63310617-63310636 | Msa1068350:CDS | 20.0% |
| !! | ATGTCTATAAGATATATAAG+TGG | - | chr7_2:63310826-63310845 | Msa1068350:CDS | 20.0% |
| !! | TGTCTATAAGATATATAAGT+GGG | - | chr7_2:63310827-63310846 | Msa1068350:CDS | 20.0% |
| !!! | TGAATGTTTATATTGATTGA+AGG | - | chr7_2:63311416-63311435 | Msa1068350:CDS | 20.0% |
| !!! | AATTTAATGTTCTGGTTTAT+GGG | - | chr7_2:63311444-63311463 | Msa1068350:CDS | 20.0% |
| !!! | ATGATGAAAAACTGTTTTAA+TGG | - | chr7_2:63312066-63312085 | Msa1068350:intron | 20.0% |
| ! | TGAAAATTCAGTTATTGATG+CGG | - | chr7_2:63310452-63310471 | Msa1068350:three_prime_UTR | 25.0% |
| ! | CATTTAGTGATAAAGAATCA+TGG | - | chr7_2:63310493-63310512 | Msa1068350:three_prime_UTR | 25.0% |
| !!! | CTTATTTTGTGAATTGTTCT+TGG | + | chr7_2:63310613-63310632 | None:intergenic | 25.0% |
| ! | ACAAAATAAGAAATCGGATA+AGG | - | chr7_2:63310623-63310642 | Msa1068350:CDS | 25.0% |
| !!! | GCTTTAATAAATTCTAAAGC+TGG | - | chr7_2:63310939-63310958 | Msa1068350:CDS | 25.0% |
| ! | ACCGAACAAACAATAAATAT+CGG | - | chr7_2:63311261-63311280 | Msa1068350:CDS | 25.0% |
| ! | AGTACAAAATACTAACCTAA+TGG | + | chr7_2:63311287-63311306 | None:intergenic | 25.0% |
| ! | TGAAATTTGAATGAATGTTC+TGG | - | chr7_2:63311334-63311353 | Msa1068350:CDS | 25.0% |
| !! | AGGTTTAGAATTTAATGTTC+TGG | - | chr7_2:63311436-63311455 | Msa1068350:CDS | 25.0% |
| !!! | GAATTTAATGTTCTGGTTTA+TGG | - | chr7_2:63311443-63311462 | Msa1068350:CDS | 25.0% |
| !! | TGTTGTATTTTGTTCTGATT+TGG | - | chr7_2:63311692-63311711 | Msa1068350:CDS | 25.0% |
| ! | AAAACACCTTGAAAAACATT+CGG | + | chr7_2:63311904-63311923 | None:intergenic | 25.0% |
| ! | TTTCGATGAGTTAACTAATT+TGG | - | chr7_2:63311996-63312015 | Msa1068350:CDS | 25.0% |
| !!! | TGAAAAACTGTTTTAATGGA+AGG | - | chr7_2:63312070-63312089 | Msa1068350:intron | 25.0% |
| ! | CTTTAGTCATTTCAACATTA+TGG | - | chr7_2:63312263-63312282 | Msa1068350:intron | 25.0% |
| ! | TGAATAAATGAAAAGCAAGA+TGG | + | chr7_2:63312402-63312421 | None:intergenic | 25.0% |
| ! | CATAATAGTATTTGAAGGAA+AGG | + | chr7_2:63312437-63312456 | None:intergenic | 25.0% |
| ! | TTCCTTCAAATACTATTATG+AGG | - | chr7_2:63312437-63312456 | Msa1068350:intron | 25.0% |
| !!! | ATGTTGATAATGATAATGAG+AGG | - | chr7_2:63312538-63312557 | Msa1068350:CDS | 25.0% |
| !!! | TGTTGATAATGATAATGAGA+GGG | - | chr7_2:63312539-63312558 | Msa1068350:CDS | 25.0% |
| ! | TGATGCTTTAACTAAAAAAG+CGG | - | chr7_2:63313288-63313307 | Msa1068350:CDS | 25.0% |
| ! | AATTCTTGATTGTTATGCAT+TGG | - | chr7_2:63313355-63313374 | Msa1068350:five_prime_UTR | 25.0% |
| ATATTAACTTCATCTGAGAG+TGG | - | chr7_2:63310417-63310436 | Msa1068350:three_prime_UTR | 30.0% | |
| TAAAGAATCATGGAAGTCTT+TGG | - | chr7_2:63310503-63310522 | Msa1068350:exon | 30.0% | |
| CGTTATGTTTGTAACAAAGA+AGG | - | chr7_2:63310657-63310676 | Msa1068350:CDS | 30.0% | |
| TAACAAAGAAGGTTTCAAGA+AGG | - | chr7_2:63310668-63310687 | Msa1068350:CDS | 30.0% | |
| AACAAAGAAGGTTTCAAGAA+GGG | - | chr7_2:63310669-63310688 | Msa1068350:CDS | 30.0% | |
| TAAAGAAAAACCAGAGGAAA+GGG | - | chr7_2:63310758-63310777 | Msa1068350:CDS | 30.0% | |
| ! | AGCTGGAATATATTTGAAGT+TGG | - | chr7_2:63310791-63310810 | Msa1068350:CDS | 30.0% |
| ! | AAATGCTCTGGTTTATGTAA+TGG | + | chr7_2:63310870-63310889 | None:intergenic | 30.0% |
| AGAACATCTTATGAAGTGAT+GGG | - | chr7_2:63310972-63310991 | Msa1068350:CDS | 30.0% | |
| ! | GAATCTTCCTTTTCGATTTT+CGG | - | chr7_2:63311016-63311035 | Msa1068350:CDS | 30.0% |
| TTTAAGTCCGAAAATCGAAA+AGG | + | chr7_2:63311026-63311045 | None:intergenic | 30.0% | |
| TGGATATCATAGTAAAAACC+TGG | + | chr7_2:63311140-63311159 | None:intergenic | 30.0% | |
| !!! | AAGACATAGCCAGTATTTTT+TGG | - | chr7_2:63311174-63311193 | Msa1068350:CDS | 30.0% |
| !!! | AGACATAGCCAGTATTTTTT+GGG | - | chr7_2:63311175-63311194 | Msa1068350:CDS | 30.0% |
| CAACAAGATTATGCTCTATT+TGG | - | chr7_2:63311212-63311231 | Msa1068350:CDS | 30.0% | |
| GCCGATATTTATTGTTTGTT+CGG | + | chr7_2:63311265-63311284 | None:intergenic | 30.0% | |
| AACAATAAATATCGGCCATT+AGG | - | chr7_2:63311269-63311288 | Msa1068350:CDS | 30.0% | |
| !! | ATGTTCTGGTTTAGAATTGA+AGG | - | chr7_2:63311348-63311367 | Msa1068350:CDS | 30.0% |
| CTGGTATATGTGTGTTAATT+TGG | - | chr7_2:63311373-63311392 | Msa1068350:CDS | 30.0% | |
| AAACACATATGATCTTTCCA+TGG | + | chr7_2:63311507-63311526 | None:intergenic | 30.0% | |
| TTTCTATTTACACAGCACAA+TGG | - | chr7_2:63311651-63311670 | Msa1068350:CDS | 30.0% | |
| ATGATTGTCAAAACCAAGAA+AGG | + | chr7_2:63311731-63311750 | None:intergenic | 30.0% | |
| ! | TATGGTTTGAGGTTTCTTAT+TGG | + | chr7_2:63311845-63311864 | None:intergenic | 30.0% |
| ! | TCAATTCCGAATGTTTTTCA+AGG | - | chr7_2:63311895-63311914 | Msa1068350:CDS | 30.0% |
| !!! | GTTTTTCAAGGTGTTTTTCA+TGG | - | chr7_2:63311907-63311926 | Msa1068350:CDS | 30.0% |
| GAGAATGCAAAGAAAAATCT+CGG | - | chr7_2:63311952-63311971 | Msa1068350:CDS | 30.0% | |
| AATCAGATTTCGACTACAAT+TGG | - | chr7_2:63312037-63312056 | Msa1068350:intron | 30.0% | |
| ATCAGATTTCGACTACAATT+GGG | - | chr7_2:63312038-63312057 | Msa1068350:intron | 30.0% | |
| TAAAGAATCGAACAAGTGAA+TGG | + | chr7_2:63312248-63312267 | None:intergenic | 30.0% | |
| TGGTGTATACTTGTTTACTA+CGG | + | chr7_2:63312382-63312401 | None:intergenic | 30.0% | |
| CTCCTCATAATAGTATTTGA+AGG | + | chr7_2:63312442-63312461 | None:intergenic | 30.0% | |
| CTTCAAATACTATTATGAGG+AGG | - | chr7_2:63312440-63312459 | Msa1068350:intron | 30.0% | |
| ! | CAAAGTTTTCACAATTGAGA+AGG | - | chr7_2:63312497-63312516 | Msa1068350:CDS | 30.0% |
| ATTATGATCTTCAAACCTTG+GGG | + | chr7_2:63312610-63312629 | None:intergenic | 30.0% | |
| GATTATGATCTTCAAACCTT+GGG | + | chr7_2:63312611-63312630 | None:intergenic | 30.0% | |
| !! | ATCATAATCGACTTGATGAA+AGG | - | chr7_2:63312622-63312641 | Msa1068350:CDS | 30.0% |
| !! | TCATAATCGACTTGATGAAA+GGG | - | chr7_2:63312623-63312642 | Msa1068350:CDS | 30.0% |
| !! | TCGACATGTTTTCAAGATTT+TGG | - | chr7_2:63312719-63312738 | Msa1068350:CDS | 30.0% |
| !! | ACATGTTTTCAAGATTTTGG+AGG | - | chr7_2:63312722-63312741 | Msa1068350:CDS | 30.0% |
| !!! | CTGCACAATATGTTTTAAAG+CGG | - | chr7_2:63312787-63312806 | Msa1068350:CDS | 30.0% |
| ! | GCATCTGAAATATTTCTCAA+CGG | - | chr7_2:63312954-63312973 | Msa1068350:CDS | 30.0% |
| !! | GAGGAGTTTCTTATTTCTAA+AGG | - | chr7_2:63313002-63313021 | Msa1068350:CDS | 30.0% |
| ! | TTTGGTCTTTCTTTGAACTT+TGG | + | chr7_2:63313110-63313129 | None:intergenic | 30.0% |
| AAGAAAGACCAAATCCAATT+AGG | - | chr7_2:63313117-63313136 | Msa1068350:CDS | 30.0% | |
| TTCTTTGACCTAATTGGATT+TGG | + | chr7_2:63313128-63313147 | None:intergenic | 30.0% | |
| ! | TGAGGCTTTAACAAATTAAG+CGG | - | chr7_2:63313226-63313245 | Msa1068350:CDS | 30.0% |
| !!! | GTGTTTGTTGCTGTTTTCAA+TGG | - | chr7_2:63310389-63310408 | Msa1068350:three_prime_UTR | 35.0% |
| ATAACACTGGATTCTCTGTT+AGG | - | chr7_2:63310574-63310593 | Msa1068350:CDS | 35.0% | |
| GTCTGCTTAATCCTAAAAAC+AGG | - | chr7_2:63310694-63310713 | Msa1068350:CDS | 35.0% | |
| TTCTCATACTCAACAAGAAC+TGG | + | chr7_2:63310735-63310754 | None:intergenic | 35.0% | |
| GAAAGCTAAAGAAAAACCAG+AGG | - | chr7_2:63310752-63310771 | Msa1068350:CDS | 35.0% | |
| CTAAAGAAAAACCAGAGGAA+AGG | - | chr7_2:63310757-63310776 | Msa1068350:CDS | 35.0% | |
| CGAGAAGTAAATGAAGTTCA+AGG | - | chr7_2:63310909-63310928 | Msa1068350:CDS | 35.0% | |
| GAGAACATCTTATGAAGTGA+TGG | - | chr7_2:63310971-63310990 | Msa1068350:CDS | 35.0% | |
| TCTAATGACAACTCGTCAAA+AGG | - | chr7_2:63311052-63311071 | Msa1068350:CDS | 35.0% | |
| ! | TGGTTTAGAATTGAAGGTTC+TGG | - | chr7_2:63311354-63311373 | Msa1068350:CDS | 35.0% |
| CATAAATTCCAAGGCAAGAT+AGG | + | chr7_2:63311474-63311493 | None:intergenic | 35.0% | |
| TGTACAGAGCATAAATTCCA+AGG | + | chr7_2:63311483-63311502 | None:intergenic | 35.0% | |
| ! | CATCGTAAGAGTGTGTTATT+TGG | - | chr7_2:63311748-63311767 | Msa1068350:CDS | 35.0% |
| !!! | AGACATCAGCTACTTTTGAT+TGG | - | chr7_2:63311791-63311810 | Msa1068350:CDS | 35.0% |
| ! | TTTTTCATGGTCTTTGCTCA+TGG | - | chr7_2:63311920-63311939 | Msa1068350:CDS | 35.0% |
| ! | TTTTAATGGAAGGCCTACTT+CGG | - | chr7_2:63312080-63312099 | Msa1068350:intron | 35.0% |
| CTCATTCAAATCGTATGCAT+TGG | - | chr7_2:63312124-63312143 | Msa1068350:intron | 35.0% | |
| !! | TATGCATTGGTCTTCAGTTT+GGG | - | chr7_2:63312137-63312156 | Msa1068350:intron | 35.0% |
| ! | TCTTTCAATGCTTTTCTTCG+TGG | - | chr7_2:63312207-63312226 | Msa1068350:intron | 35.0% |
| ACATTATGGTTCAGAGAATG+AGG | - | chr7_2:63312277-63312296 | Msa1068350:intron | 35.0% | |
| CATTATGGTTCAGAGAATGA+GGG | - | chr7_2:63312278-63312297 | Msa1068350:intron | 35.0% | |
| ! | GGTTTCGAATGTTGATGTTT+TGG | - | chr7_2:63312560-63312579 | Msa1068350:CDS | 35.0% |
| CGATTATGATCTTCAAACCT+TGG | + | chr7_2:63312612-63312631 | None:intergenic | 35.0% | |
| !! | TTCAAGATTTTGGAGGTCTT+AGG | - | chr7_2:63312729-63312748 | Msa1068350:CDS | 35.0% |
| !! | CGCTTTAAAACATATTGTGC+AGG | + | chr7_2:63312789-63312808 | None:intergenic | 35.0% |
| !!! | CACAATATGTTTTAAAGCGG+TGG | - | chr7_2:63312790-63312809 | Msa1068350:CDS | 35.0% |
| !! | ACTGCTTTTGAAGACTTAGA+AGG | + | chr7_2:63313056-63313075 | None:intergenic | 35.0% |
| GACAGAAATTCCTTATAGCT+CGG | - | chr7_2:63313183-63313202 | Msa1068350:CDS | 35.0% | |
| GAAGCAAAAGAAAGATGATG+AGG | - | chr7_2:63313208-63313227 | Msa1068350:CDS | 35.0% | |
| ! | GAGGCTTTAACAAATTAAGC+GGG | - | chr7_2:63313227-63313246 | Msa1068350:CDS | 35.0% |
| ATCTGAGAGTGGACAATTGA+CGG | - | chr7_2:63310428-63310447 | Msa1068350:three_prime_UTR | 40.0% | |
| !! | TCACATGTTGGCCTGTTTTT+AGG | + | chr7_2:63310708-63310727 | None:intergenic | 40.0% |
| !! | TCTTATGAAGTGATGGGTCA+AGG | - | chr7_2:63310978-63310997 | Msa1068350:CDS | 40.0% |
| TCCATCTGCCCAAAAAATAC+TGG | + | chr7_2:63311186-63311205 | None:intergenic | 40.0% | |
| ATTTATGCTCTGTACAGCCA+TGG | - | chr7_2:63311487-63311506 | Msa1068350:CDS | 40.0% | |
| TCCAGCTATGCAAAGATCAT+AGG | - | chr7_2:63311597-63311616 | Msa1068350:CDS | 40.0% | |
| ACCTATGATCTTTGCATAGC+TGG | + | chr7_2:63311601-63311620 | None:intergenic | 40.0% | |
| TTCATTTCAGCTGCCTTTCT+TGG | - | chr7_2:63311715-63311734 | Msa1068350:CDS | 40.0% | |
| TGGTCTGTGTATATGGTTTG+AGG | + | chr7_2:63311856-63311875 | None:intergenic | 40.0% | |
| TCAAACCATATACACAGACC+AGG | - | chr7_2:63311855-63311874 | Msa1068350:CDS | 40.0% | |
| !! | GTATGCATTGGTCTTCAGTT+TGG | - | chr7_2:63312136-63312155 | Msa1068350:intron | 40.0% |
| AATCGAACAAGTGAATGGTC+TGG | + | chr7_2:63312243-63312262 | None:intergenic | 40.0% | |
| ! | TCATGCTGAGTTGGACTTTA+AGG | - | chr7_2:63312305-63312324 | Msa1068350:intron | 40.0% |
| TATGAGGAGGACACAACAAA+AGG | - | chr7_2:63312453-63312472 | Msa1068350:intron | 40.0% | |
| ATGAGGAGGACACAACAAAA+GGG | - | chr7_2:63312454-63312473 | Msa1068350:intron | 40.0% | |
| TTGAAGAAAACCTTTCCCCA+AGG | - | chr7_2:63312592-63312611 | Msa1068350:CDS | 40.0% | |
| CATGTCGTATGTTTGAGAAC+CGG | - | chr7_2:63312685-63312704 | Msa1068350:CDS | 40.0% | |
| ATGTCGTATGTTTGAGAACC+GGG | - | chr7_2:63312686-63312705 | Msa1068350:CDS | 40.0% | |
| !! | AAGATTTTGGAGGTCTTAGG+TGG | - | chr7_2:63312732-63312751 | Msa1068350:CDS | 40.0% |
| GATTTCAGCTTATCGACAGA+CGG | + | chr7_2:63312831-63312850 | None:intergenic | 40.0% | |
| CTGAAATCCACCATGAATGT+TGG | - | chr7_2:63312843-63312862 | Msa1068350:CDS | 40.0% | |
| TTTAGTGCCAACATTCATGG+TGG | + | chr7_2:63312853-63312872 | None:intergenic | 40.0% | |
| GTCTTTAGTGCCAACATTCA+TGG | + | chr7_2:63312856-63312875 | None:intergenic | 40.0% | |
| ATTTCTCAACGGTGTTCTTG+AGG | - | chr7_2:63312965-63312984 | Msa1068350:CDS | 40.0% | |
| ! | TGAAGACTTAGAAGGCGTAA+CGG | + | chr7_2:63313048-63313067 | None:intergenic | 40.0% |
| AGTCGCTTCTTTGACCTAAT+TGG | + | chr7_2:63313134-63313153 | None:intergenic | 40.0% | |
| TTTGCTTCTTCCGAGCTATA+AGG | + | chr7_2:63313196-63313215 | None:intergenic | 40.0% | |
| AGAACTGGACTGTCACATGT+TGG | + | chr7_2:63310720-63310739 | None:intergenic | 45.0% | |
| GAAAAACCAGAGGAAAGGGT+TGG | - | chr7_2:63310762-63310781 | Msa1068350:CDS | 45.0% | |
| TTACAACCAACCCTTTCCTC+TGG | + | chr7_2:63310771-63310790 | None:intergenic | 45.0% | |
| !! | GAAAGGGTTGGTTGTAAAGC+TGG | - | chr7_2:63310774-63310793 | Msa1068350:CDS | 45.0% |
| CTCAAGTAGCACAAATGCTC+TGG | + | chr7_2:63310882-63310901 | None:intergenic | 45.0% | |
| GACAACTCGTCAAAAGGAGA+TGG | - | chr7_2:63311058-63311077 | Msa1068350:CDS | 45.0% | |
| AACTCGTCAAAAGGAGATGG+TGG | - | chr7_2:63311061-63311080 | Msa1068350:CDS | 45.0% | |
| AATGAAGCTCTCTCGAAACC+AGG | - | chr7_2:63311119-63311138 | Msa1068350:CDS | 45.0% | |
| TGTCTTCTGCAGCATCAACT+TGG | + | chr7_2:63311160-63311179 | None:intergenic | 45.0% | |
| !!! | GCCAGTATTTTTTGGGCAGA+TGG | - | chr7_2:63311182-63311201 | Msa1068350:CDS | 45.0% |
| AGCCACTTAAAGTCCGAAGT+AGG | + | chr7_2:63312096-63312115 | None:intergenic | 45.0% | |
| !! | ATTGGTCTTCAGTTTGGGTG+AGG | - | chr7_2:63312142-63312161 | Msa1068350:intron | 45.0% |
| ! | GTGAGGTCACATTTTACAGC+TGG | - | chr7_2:63312159-63312178 | Msa1068350:intron | 45.0% |
| GAGGGATAATCATGCTGAGT+TGG | - | chr7_2:63312296-63312315 | Msa1068350:intron | 45.0% | |
| ATCCCAACAGTCAGCTTATG+CGG | - | chr7_2:63312355-63312374 | Msa1068350:intron | 45.0% | |
| GATCTTCAAACCTTGGGGAA+AGG | + | chr7_2:63312605-63312624 | None:intergenic | 45.0% | |
| TGTCGTATGTTTGAGAACCG+GGG | - | chr7_2:63312687-63312706 | Msa1068350:CDS | 45.0% | |
| CATGTCGACATAAGAAACCC+CGG | + | chr7_2:63312707-63312726 | None:intergenic | 45.0% | |
| TTGATATCGTTGCGCTTCAG+TGG | + | chr7_2:63312880-63312899 | None:intergenic | 45.0% | |
| TGTTCTTGAGGCAGGGAAAA+AGG | - | chr7_2:63312977-63312996 | Msa1068350:CDS | 45.0% | |
| CTGTCTGTGAACCATCTGTT+GGG | - | chr7_2:63313078-63313097 | Msa1068350:CDS | 45.0% | |
| !! | GAAGTGATGGGTCAAGGAGT+TGG | - | chr7_2:63310984-63311003 | Msa1068350:CDS | 50.0% |
| TGGGTGATCCTATCTTGCCT+TGG | - | chr7_2:63311463-63311482 | Msa1068350:CDS | 50.0% | |
| ACCATATACACAGACCAGGC+TGG | - | chr7_2:63311859-63311878 | Msa1068350:CDS | 50.0% | |
| ACCAGCCTGGTCTGTGTATA+TGG | + | chr7_2:63311863-63311882 | None:intergenic | 50.0% | |
| TGGTCTTTGCTCATGGCACA+TGG | - | chr7_2:63311927-63311946 | Msa1068350:CDS | 50.0% | |
| GGTCTTTGCTCATGGCACAT+GGG | - | chr7_2:63311928-63311947 | Msa1068350:CDS | 50.0% | |
| GGCCTACTTCGGACTTTAAG+TGG | - | chr7_2:63312091-63312110 | Msa1068350:intron | 50.0% | |
| GACCGCATAAGCTGACTGTT+GGG | + | chr7_2:63312360-63312379 | None:intergenic | 50.0% | |
| AGGGTTGTCACAGTCGACAT+TGG | - | chr7_2:63312642-63312661 | Msa1068350:CDS | 50.0% | |
| GGGTTGTCACAGTCGACATT+GGG | - | chr7_2:63312643-63312662 | Msa1068350:CDS | 50.0% | |
| TACACGTGTTTGCGCAGATG+CGG | - | chr7_2:63312929-63312948 | Msa1068350:CDS | 50.0% | |
| TCAACGGTGTTCTTGAGGCA+GGG | - | chr7_2:63312970-63312989 | Msa1068350:CDS | 50.0% | |
| GCTGTCTGTGAACCATCTGT+TGG | - | chr7_2:63313077-63313096 | Msa1068350:CDS | 50.0% | |
| ! | TTTGGTGCAGTCCCAACAGA+TGG | + | chr7_2:63313092-63313111 | None:intergenic | 50.0% |
| !! | GTGATGGGTCAAGGAGTTGG+AGG | - | chr7_2:63310987-63311006 | Msa1068350:CDS | 55.0% |
| ! | CGTCAAAAGGAGATGGTGGC+TGG | - | chr7_2:63311065-63311084 | Msa1068350:CDS | 55.0% |
| ACTTCAACAACGCACCAGCC+TGG | + | chr7_2:63311876-63311895 | None:intergenic | 55.0% | |
| GGACCGCATAAGCTGACTGT+TGG | + | chr7_2:63312361-63312380 | None:intergenic | 55.0% | |
| CTCAACGGTGTTCTTGAGGC+AGG | - | chr7_2:63312969-63312988 | Msa1068350:CDS | 55.0% | |
| TGAGGCAGGGAAAAAGGCAG+AGG | - | chr7_2:63312983-63313002 | Msa1068350:CDS | 55.0% | |
| GGGTCAAGGAGTTGGAGGCA+CGG | - | chr7_2:63310992-63311011 | Msa1068350:CDS | 60.0% | |
| ACGTGTTTGCGCAGATGCGG+AGG | - | chr7_2:63312932-63312951 | Msa1068350:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 63310363 | 63313396 | 63310363 | ID=Msa1068350;Name=Msa1068350 |
| chr7_2 | mRNA | 63310363 | 63313396 | 63310363 | ID=Msa1068350-mRNA-1;Parent=Msa1068350;Name=Msa1068350-mRNA-1;_AED=0.00;_eAED=0.00;_QI=45|1|1|1|1|1|2|152|800 |
| chr7_2 | exon | 63310363 | 63312034 | 63310363 | ID=Msa1068350-mRNA-1:exon:13093;Parent=Msa1068350-mRNA-1 |
| chr7_2 | exon | 63312469 | 63313396 | 63312469 | ID=Msa1068350-mRNA-1:exon:13092;Parent=Msa1068350-mRNA-1 |
| chr7_2 | five_prime_UTR | 63313352 | 63313396 | 63313352 | ID=Msa1068350-mRNA-1:five_prime_utr;Parent=Msa1068350-mRNA-1 |
| chr7_2 | CDS | 63312469 | 63313351 | 63312469 | ID=Msa1068350-mRNA-1:cds;Parent=Msa1068350-mRNA-1 |
| chr7_2 | CDS | 63310515 | 63312034 | 63310515 | ID=Msa1068350-mRNA-1:cds;Parent=Msa1068350-mRNA-1 |
| chr7_2 | three_prime_UTR | 63310363 | 63310514 | 63310363 | ID=Msa1068350-mRNA-1:three_prime_utr;Parent=Msa1068350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
