AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1069110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1069110 MtrunA17_Chr7g0251031 83.036 112 19 0 1 112 97 208 1.23e-68 206
Msa1069110 MtrunA17_Chr7g0251001 84.821 112 17 0 1 112 230 341 3.12e-68 209
Msa1069110 MtrunA17_Chr7g0251081 83.929 112 17 1 1 112 280 390 9.50e-66 203
Msa1069110 MtrunA17_Chr7g0251071 85.714 112 16 0 1 112 524 635 2.65e-65 208
Msa1069110 MtrunA17_Chr1g0212821 84.821 112 16 1 1 112 253 363 1.31e-64 200
Msa1069110 MtrunA17_Chr7g0251101 83.929 112 17 1 1 112 530 640 8.65e-64 204
Msa1069110 MtrunA17_Chr7g0251051 83.929 112 17 1 1 112 484 594 1.92e-62 200
Msa1069110 MtrunA17_Chr7g0253471 78.571 112 22 1 1 112 53 162 3.70e-62 187
Msa1069110 MtrunA17_Chr4g0022301 74.107 112 28 1 1 112 11 121 6.45e-60 180
Msa1069110 MtrunA17_Chr7g0251061 83.036 112 18 1 1 112 519 629 8.78e-60 194
Msa1069110 MtrunA17_Chr7g0250931 76.786 112 25 1 1 112 719 829 2.01e-56 187
Msa1069110 MtrunA17_Chr7g0250991 75.893 112 24 2 1 112 78 186 6.98e-56 173
Msa1069110 MtrunA17_Chr4g0022331 75.893 112 26 1 1 112 703 813 3.95e-54 180
Msa1069110 MtrunA17_Chr7g0250891 83.146 89 15 0 24 112 1 89 3.82e-51 157
Msa1069110 MtrunA17_Chr7g0250741 72.321 112 30 1 1 112 705 815 2.08e-49 167
Msa1069110 MtrunA17_Chr1g0209401 52.679 112 52 1 1 112 225 335 3.21e-38 131
Msa1069110 MtrunA17_Chr7g0232421 54.128 109 49 1 1 109 235 342 1.16e-37 130
Msa1069110 MtrunA17_Chr7g0232441 55.963 109 47 1 1 109 495 602 2.68e-37 132
Msa1069110 MtrunA17_Chr1g0209471 53.211 109 50 1 1 109 235 342 4.15e-37 128
Msa1069110 MtrunA17_Chr7g0238401 59.821 112 41 3 1 112 515 622 8.60e-36 128
Msa1069110 MtrunA17_Chr6g0484071 52.679 112 52 1 1 112 229 339 1.40e-35 124
Msa1069110 MtrunA17_Chr6g0483981 53.571 112 51 1 1 112 438 548 3.53e-35 126
Msa1069110 MtrunA17_Chr6g0484021 53.571 112 51 1 1 112 477 587 3.67e-35 126
Msa1069110 MtrunA17_Chr6g0484041 55.660 106 46 1 1 106 493 597 3.78e-35 126
Msa1069110 MtrunA17_Chr6g0484031 55.660 106 46 1 1 106 374 478 1.25e-34 124
Msa1069110 MtrunA17_Chr6g0484051 50.893 112 53 1 1 112 519 628 1.53e-33 122
Msa1069110 MtrunA17_Chr6g0483821 50.893 112 54 1 1 112 530 640 2.38e-33 121
Msa1069110 MtrunA17_Chr6g0483811 50.000 112 54 2 1 112 229 338 4.25e-33 118
Msa1069110 MtrunA17_Chr8g0391231 50.877 114 54 2 1 112 513 626 4.38e-33 120
Msa1069110 MtrunA17_Chr6g0483851 49.107 112 56 1 1 112 581 691 7.32e-32 117
Msa1069110 MtrunA17_Chr6g0483791 50.909 110 52 2 1 110 540 647 9.12e-32 117
Msa1069110 MtrunA17_Chr1g0209511 48.673 113 56 2 1 112 489 600 1.39e-31 116
Msa1069110 MtrunA17_Chr1g0209501 51.852 108 49 2 1 107 480 585 2.77e-31 115
Msa1069110 MtrunA17_Chr1g0157951 47.321 112 57 1 1 112 349 458 3.14e-31 115
Msa1069110 MtrunA17_Chr1g0157811 47.321 112 57 1 1 112 368 477 5.68e-31 114
Msa1069110 MtrunA17_Chr1g0158191 46.429 112 58 1 1 112 559 668 1.08e-30 114
Msa1069110 MtrunA17_Chr1g0158151 47.321 112 57 1 1 112 554 663 1.31e-30 114
Msa1069110 MtrunA17_Chr1g0158751 45.536 112 60 1 1 112 264 374 5.26e-30 110
Msa1069110 MtrunA17_Chr1g0157991 46.429 112 58 1 1 112 562 671 1.13e-29 111
Msa1069110 MtrunA17_Chr1g0157791 46.429 112 58 1 1 112 555 664 1.76e-29 110
Msa1069110 MtrunA17_Chr3g0088321 44.643 112 60 1 1 112 221 330 2.11e-29 108
Msa1069110 MtrunA17_Chr1g0158041 45.536 112 59 1 1 112 559 668 2.68e-29 110
Msa1069110 MtrunA17_Chr1g0158481 44.643 112 60 1 1 112 94 203 5.58e-29 105
Msa1069110 MtrunA17_Chr1g0158441 45.536 112 59 1 1 112 197 306 7.15e-29 106
Msa1069110 MtrunA17_Chr1g0158301 47.321 112 58 1 1 112 562 672 7.59e-29 108
Msa1069110 MtrunA17_Chr1g0158541 46.429 112 59 1 1 112 564 674 1.31e-28 108
Msa1069110 MtrunA17_Chr1g0160631 44.340 106 57 1 1 106 51 154 1.63e-28 102
Msa1069110 MtrunA17_Chr1g0158391 50.000 110 48 3 1 107 426 531 1.64e-28 107
Msa1069110 MtrunA17_Chr1g0158341 44.643 112 60 1 1 112 197 306 2.04e-28 105
Msa1069110 MtrunA17_Chr1g0158091 45.536 112 59 1 1 112 240 349 2.51e-28 105
Msa1069110 MtrunA17_Chr1g0158771 48.598 107 53 1 1 107 458 562 2.77e-28 107
Msa1069110 MtrunA17_Chr1g0158761 42.373 118 54 2 1 112 503 612 6.45e-28 106
Msa1069110 MtrunA17_Chr1g0158411 44.643 112 60 1 1 112 573 682 8.49e-28 105
Msa1069110 MtrunA17_Chr1g0158311 49.541 109 48 3 1 107 457 560 1.09e-27 105
Msa1069110 MtrunA17_Chr1g0158571 43.243 111 62 1 1 111 381 490 1.50e-27 105
Msa1069110 MtrunA17_Chr1g0158531 47.706 109 50 2 1 107 459 562 3.22e-27 104
Msa1069110 MtrunA17_Chr1g0158321 50.000 110 47 3 1 107 203 307 3.69e-27 102
Msa1069110 MtrunA17_Chr4g0037001 46.729 107 55 1 1 107 477 581 4.00e-27 103
Msa1069110 MtrunA17_Chr1g0157871 49.550 111 47 3 1 107 430 535 5.09e-27 103
Msa1069110 MtrunA17_Chr6g0467711 42.857 112 62 1 1 112 569 678 7.17e-27 103
Msa1069110 MtrunA17_Chr1g0158511 50.459 109 48 3 1 107 447 551 1.04e-26 102
Msa1069110 MtrunA17_Chr1g0157901 48.182 110 49 3 1 107 141 245 1.08e-26 99.8
Msa1069110 MtrunA17_Chr1g0160721 44.037 109 53 2 1 106 520 623 1.63e-26 102
Msa1069110 MtrunA17_Chr1g0158631 41.964 112 64 1 1 112 552 662 2.10e-26 102
Msa1069110 MtrunA17_Chr1g0160701 44.954 109 52 2 1 106 514 617 2.95e-26 101
Msa1069110 MtrunA17_Chr1g0160711 45.545 101 53 1 1 101 497 595 3.25e-26 101
Msa1069110 MtrunA17_Chr1g0160561 44.037 109 53 2 1 106 515 618 4.53e-26 100
Msa1069110 MtrunA17_Chr1g0160761 45.545 101 53 1 1 101 504 602 4.81e-26 100
Msa1069110 MtrunA17_Chr1g0157881 41.964 112 64 1 1 112 634 744 5.84e-26 100
Msa1069110 MtrunA17_Chr1g0160681 44.860 107 57 1 1 107 234 338 6.94e-26 99.4
Msa1069110 MtrunA17_Chr1g0157931 41.964 112 64 1 1 112 441 551 6.98e-26 100
Msa1069110 MtrunA17_Chr1g0160531 44.444 108 52 2 2 106 293 395 7.07e-26 99.8
Msa1069110 MtrunA17_Chr1g0158101 48.148 108 48 3 1 106 450 551 7.80e-26 100
Msa1069110 MtrunA17_Chr6g0484101 51.190 84 40 1 24 107 1 83 1.55e-25 92.4
Msa1069110 MtrunA17_Chr6g0467701 48.624 109 49 4 1 107 203 306 1.63e-25 97.8
Msa1069110 MtrunA17_Chr1g0157911 43.363 113 61 2 1 112 567 677 1.72e-25 99.4
Msa1069110 MtrunA17_Chr1g0208841 43.363 113 38 2 1 112 194 281 3.49e-25 96.3
Msa1069110 MtrunA17_Chr1g0158611 43.925 107 57 2 1 107 220 323 5.34e-25 96.7
Msa1069110 MtrunA17_Chr6g0467641 48.624 109 49 4 1 107 362 465 8.12e-25 97.1
Msa1069110 MtrunA17_Chr1g0158711 48.624 109 50 3 1 107 430 534 1.51e-24 96.7
Msa1069110 MtrunA17_Chr1g0158471 48.182 110 48 3 1 107 447 550 1.71e-24 96.7
Msa1069110 MtrunA17_Chr6g0467681 48.624 109 49 4 1 107 433 536 1.86e-24 96.3
Msa1069110 MtrunA17_Chr1g0157941 45.299 117 52 4 1 112 428 537 2.02e-24 96.3
Msa1069110 MtrunA17_Chr6g0467661 48.624 109 49 4 1 107 433 536 2.07e-24 96.3
Msa1069110 MtrunA17_Chr1g0157801 46.296 108 49 4 1 106 467 567 3.38e-24 95.5
Msa1069110 MtrunA17_Chr1g0158661 39.316 117 60 2 1 112 538 648 4.30e-24 95.5
Msa1069110 MtrunA17_Chr1g0158651 43.925 107 57 2 1 107 476 579 4.34e-24 95.5
Msa1069110 MtrunA17_Chr1g0160771 42.991 107 59 1 1 107 470 574 8.08e-24 94.7
Msa1069110 MtrunA17_Chr3g0088341 47.222 108 53 2 1 107 449 553 1.08e-23 94.4
Msa1069110 MtrunA17_Chr1g0158051 44.444 108 53 2 1 106 473 575 1.48e-23 94.0
Msa1069110 MtrunA17_Chr1g0157781 45.370 108 50 3 1 106 472 572 1.63e-23 93.6
Msa1069110 MtrunA17_Chr1g0160581 42.991 107 59 1 1 107 474 578 1.89e-23 93.6
Msa1069110 MtrunA17_Chr1g0158181 42.056 107 56 2 1 106 495 596 3.60e-23 92.8
Msa1069110 MtrunA17_Chr1g0157861 39.286 112 67 1 1 112 603 713 4.05e-23 92.8
Msa1069110 MtrunA17_Chr1g0160731 42.453 106 59 1 1 106 466 569 4.61e-23 92.4
Msa1069110 MtrunA17_Chr1g0209491 48.148 81 41 1 29 109 1 80 5.53e-23 85.9
Msa1069110 MtrunA17_Chr1g0209421 45.679 81 43 1 29 109 1 80 8.10e-21 80.1
Msa1069110 MtrunA17_Chr1g0157971 42.453 106 49 2 1 106 471 564 3.22e-20 84.3
Msa1069110 MtrunA17_Chr3g0137741 41.667 108 59 3 1 107 660 764 1.52e-19 82.4
Msa1069110 MtrunA17_Chr4g0036991 39.091 110 56 3 1 107 484 585 3.26e-19 81.6
Msa1069110 MtrunA17_Chr6g0467281 39.362 94 54 2 16 107 671 763 2.23e-17 76.3
Msa1069110 MtrunA17_Chr2g0297921 36.000 100 58 3 13 109 322 418 4.08e-17 75.5
Msa1069110 MtrunA17_Chr6g0467301 37.615 109 63 3 1 107 663 768 5.78e-17 75.1
Msa1069110 MtrunA17_Chr2g0297951 35.000 100 59 3 13 109 312 408 9.38e-17 74.3
Msa1069110 MtrunA17_Chr2g0318171 40.000 110 59 4 1 107 649 754 2.80e-16 73.2
Msa1069110 MtrunA17_Chr2g0314611 37.615 109 63 3 1 107 653 758 8.08e-16 71.6
Msa1069110 MtrunA17_Chr2g0297901 37.113 97 57 3 13 107 154 248 1.71e-15 70.1
Msa1069110 MtrunA17_Chr1g0149381 40.741 108 60 3 1 107 669 773 1.94e-15 70.9
Msa1069110 MtrunA17_Chr2g0297911 34.343 99 61 3 13 109 253 349 2.99e-15 70.1
Msa1069110 MtrunA17_Chr2g0306811 34.746 118 61 4 1 107 278 390 3.04e-15 70.1
Msa1069110 MtrunA17_Chr1g0160621 48.333 60 31 0 1 60 51 110 3.88e-15 66.2
Msa1069110 MtrunA17_Chr1g0160691 44.595 74 39 1 33 106 4 75 4.72e-15 65.9
Msa1069110 MtrunA17_Chr2g0297961 32.323 99 63 3 13 109 252 348 4.28e-14 66.6
Msa1069110 MtrunA17_Chr1g0202331 33.028 109 67 4 1 107 702 806 7.90e-14 66.2
Msa1069110 MtrunA17_Chr2g0333091 34.259 108 67 3 1 107 660 764 8.26e-14 66.2
Msa1069110 MtrunA17_Chr2g0311511 36.111 108 64 3 1 106 612 716 2.04e-13 65.1
Msa1069110 MtrunA17_Chr8g0358821 32.710 107 69 2 1 107 856 959 4.77e-13 63.9
Msa1069110 MtrunA17_Chr2g0318201 41.379 87 46 3 24 107 1 85 6.10e-13 60.5
Msa1069110 MtrunA17_Chr4g0063251 32.773 119 62 5 1 107 276 388 6.10e-13 63.5
Msa1069110 MtrunA17_Chr4g0063701 35.185 108 64 3 1 107 695 797 6.93e-13 63.5
Msa1069110 MtrunA17_Chr1g0160551 76.471 34 8 0 1 34 39 72 8.81e-13 59.3
Msa1069110 MtrunA17_Chr1g0161631 30.435 115 70 3 1 107 666 778 1.53e-12 62.4
Msa1069110 MtrunA17_Chr8g0358781 33.028 109 70 2 1 109 511 616 2.64e-12 61.6
Msa1069110 MtrunA17_Chr2g0323341 31.250 112 70 4 1 109 576 683 1.26e-11 59.7
Msa1069110 MtrunA17_Chr1g0158131 56.818 44 19 0 1 44 372 415 1.77e-11 59.3
Msa1069110 MtrunA17_Chr2g0311521 33.945 109 67 3 1 107 909 1014 1.99e-11 59.3
Msa1069110 MtrunA17_Chr8g0379931 33.636 110 71 1 1 110 876 983 3.93e-11 58.5
Msa1069110 MtrunA17_Chr8g0361341 39.286 112 56 6 1 107 8 112 4.30e-11 56.2
Msa1069110 MtrunA17_Chr2g0297941 29.358 109 70 4 2 107 261 365 4.32e-11 58.2
Msa1069110 MtrunA17_Chr5g0413291 35.000 120 51 6 1 107 472 577 4.91e-11 58.2
Msa1069110 MtrunA17_Chr1g0154371 33.962 106 65 4 1 105 526 627 8.87e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1069110 AT1G70250.1 55.652 115 48 2 1 112 627 741 9.32e-38 134
Msa1069110 AT5G39020.1 50.893 112 55 0 1 112 663 774 3.46e-36 130
Msa1069110 AT5G38280.1 50.877 114 54 1 1 112 499 612 2.52e-34 124
Msa1069110 AT5G38280.2 50.877 114 54 1 1 112 499 612 2.91e-34 124
Msa1069110 AT5G39030.2 49.123 114 56 1 1 112 659 772 2.49e-33 122
Msa1069110 AT5G39030.1 49.123 114 56 1 1 112 665 778 2.80e-33 122
Msa1069110 AT4G18250.1 54.955 111 46 2 1 107 524 634 2.98e-33 121
Msa1069110 AT1G67000.1 49.593 123 51 3 1 112 724 846 7.48e-33 120
Msa1069110 AT5G38260.1 49.550 111 54 1 1 109 488 598 2.09e-32 119
Msa1069110 AT1G66980.1 44.348 115 61 1 1 112 972 1086 9.46e-32 117
Msa1069110 AT1G66980.4 44.348 115 61 1 1 112 955 1069 9.64e-32 117
Msa1069110 AT1G66980.2 44.348 115 61 1 1 112 1001 1115 1.04e-31 117
Msa1069110 AT1G66980.3 44.348 115 61 1 1 112 999 1113 1.32e-31 117
Msa1069110 AT5G38250.1 50.000 114 55 1 1 112 475 588 1.54e-31 116
Msa1069110 AT5G38240.3 49.123 114 56 1 1 112 432 545 1.72e-31 116
Msa1069110 AT5G38240.2 49.123 114 56 1 1 112 478 591 2.49e-31 116
Msa1069110 AT5G38240.1 49.123 114 56 1 1 112 496 609 2.97e-31 115
Msa1069110 AT1G66930.1 50.000 116 54 2 1 112 514 629 3.71e-31 115
Msa1069110 AT1G66930.3 50.000 116 54 2 1 112 483 598 4.07e-31 115
Msa1069110 AT1G66930.2 50.000 116 54 2 1 112 723 838 7.52e-31 115
Msa1069110 AT1G66910.2 49.123 114 56 1 1 112 512 625 1.48e-30 114
Msa1069110 AT1G66910.1 49.123 114 56 1 1 112 515 628 1.66e-30 114
Msa1069110 AT1G66920.3 50.000 114 53 2 1 112 449 560 1.85e-30 113
Msa1069110 AT1G66920.2 50.000 114 53 2 1 112 475 586 2.04e-30 113
Msa1069110 AT1G66920.1 50.000 114 53 2 1 112 467 578 2.08e-30 113
Msa1069110 AT1G34300.1 35.455 110 65 3 1 107 652 758 9.58e-18 77.8
Msa1069110 AT4G32300.1 38.938 113 56 5 1 107 661 766 9.95e-16 72.0
Msa1069110 AT4G00340.2 35.652 115 64 4 1 107 628 740 4.79e-14 67.0
Msa1069110 AT4G00340.1 35.652 115 64 4 1 107 649 761 4.99e-14 67.0
Msa1069110 AT5G24080.2 34.862 109 65 4 1 107 699 803 5.53e-14 67.0
Msa1069110 AT5G24080.3 34.862 109 65 4 1 107 572 676 5.73e-14 67.0
Msa1069110 AT5G24080.1 34.862 109 65 4 1 107 572 676 5.73e-14 67.0
Msa1069110 AT1G60800.2 35.714 112 61 3 1 107 404 509 1.35e-13 65.9
Msa1069110 AT1G60800.1 35.714 112 61 3 1 107 471 576 1.90e-13 65.5
Msa1069110 AT4G23260.2 40.000 110 55 5 1 105 497 600 4.99e-13 64.3
Msa1069110 AT4G23260.1 40.000 110 55 5 1 105 508 611 5.45e-13 63.9
Msa1069110 AT4G04540.1 34.314 102 60 3 1 102 522 616 2.12e-12 62.4
Msa1069110 AT4G04540.4 34.314 102 60 3 1 102 493 587 2.31e-12 62.4
Msa1069110 AT4G23320.2 38.793 116 48 6 1 105 352 455 4.62e-12 61.6
Msa1069110 AT4G23320.1 38.793 116 48 6 1 105 352 455 4.62e-12 61.6
Msa1069110 AT4G23320.3 38.793 116 48 6 1 105 373 476 5.43e-12 61.2
Msa1069110 AT4G23290.1 38.739 111 55 5 1 105 489 592 6.55e-12 60.8
Msa1069110 AT4G23290.2 38.739 111 55 5 1 105 532 635 9.07e-12 60.5
Msa1069110 AT4G04490.1 34.286 105 62 2 1 105 509 606 1.32e-11 60.1
Msa1069110 AT4G11480.3 35.965 114 54 5 1 105 493 596 1.41e-11 60.1
Msa1069110 AT4G11480.1 35.965 114 54 5 1 105 498 601 1.41e-11 60.1
Msa1069110 AT4G11480.4 35.965 114 54 5 1 105 490 593 1.45e-11 60.1
Msa1069110 AT4G21230.1 33.333 108 63 3 1 105 502 603 3.38e-11 58.9
Msa1069110 AT4G00960.2 33.028 109 68 3 1 107 133 238 3.94e-11 58.5
Msa1069110 AT4G00960.3 33.028 109 68 3 1 107 140 245 4.45e-11 58.2
Msa1069110 AT4G23240.2 36.842 114 53 6 1 105 197 300 4.60e-11 58.5
Msa1069110 AT4G11470.2 34.211 114 56 5 1 105 513 616 5.36e-11 58.5
Msa1069110 AT4G11470.1 34.211 114 56 5 1 105 508 611 5.46e-11 58.5
Msa1069110 AT4G00960.1 33.028 109 68 3 1 107 227 332 6.39e-11 58.2
Msa1069110 AT4G04570.1 33.333 102 61 3 1 102 517 611 6.49e-11 58.2

Find 19 sgRNAs with CRISPR-Local

Find 22 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGTATTTAGCAGAGCATT+TGG 0.366748 7_2:-64648731 Msa1069110:CDS
AATGCTCTGCTAAATACTTC+TGG 0.396151 7_2:+64648734 None:intergenic
CTCAGAGGAAGAAAATGATA+TGG 0.437776 7_2:-64648534 Msa1069110:CDS
TCCATCGGTGGTCTGTCTGA+TGG 0.482632 7_2:+64648467 None:intergenic
AAGTCTGATATATATAGCTT+TGG 0.485637 7_2:-64648695 Msa1069110:CDS
ATTTCTATTACTTTATCCAT+CGG 0.514398 7_2:+64648452 None:intergenic
TGACATTATATTGACGAAAG+TGG 0.522009 7_2:+64648419 None:intergenic
TCTATTACTTTATCCATCGG+TGG 0.548087 7_2:+64648455 None:intergenic
GTATTTAGCAGAGCATTTGG+TGG 0.551869 7_2:-64648728 Msa1069110:CDS
ATTTATAAGGATCTTGAGCA+AGG 0.571114 7_2:-64648587 Msa1069110:CDS
TCCATCAGACAGACCACCGA+TGG 0.589567 7_2:-64648468 Msa1069110:CDS
TATGGTTAGAAATATTACTC+TGG 0.604913 7_2:-64648516 Msa1069110:CDS
TTTATAAGGATCTTGAGCAA+GGG 0.615381 7_2:-64648586 Msa1069110:CDS
ATATTACTCTGGTGAATCTG+TGG 0.632628 7_2:-64648505 Msa1069110:CDS
TTGATTCTTGAAATGATCGG+AGG 0.633272 7_2:-64648668 Msa1069110:CDS
AAAAGAACTATGACACTGGA+GGG 0.635025 7_2:-64648643 Msa1069110:CDS
AAAGTAATAGAAATGTTGCA+AGG 0.635186 7_2:-64648443 Msa1069110:CDS
ATGTTGATTCTTGAAATGAT+CGG 0.653277 7_2:-64648671 Msa1069110:CDS
TAATTGTTTGACAGTCTCAG+AGG 0.680846 7_2:-64648549 Msa1069110:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTCTATTACTTTATCCAT+CGG + chr7_2:64648715-64648734 None:intergenic 20.0%
! AAGTCTGATATATATAGCTT+TGG - chr7_2:64648469-64648488 Msa1069110:CDS 25.0%
!!! ATGTTGATTCTTGAAATGAT+CGG - chr7_2:64648493-64648512 Msa1069110:CDS 25.0%
!!! TTTTCGAGATTGGATTTATA+AGG - chr7_2:64648564-64648583 Msa1069110:CDS 25.0%
! TATGGTTAGAAATATTACTC+TGG - chr7_2:64648648-64648667 Msa1069110:CDS 25.0%
! AAAGTAATAGAAATGTTGCA+AGG - chr7_2:64648721-64648740 Msa1069110:CDS 25.0%
!! CTGAAATGTATTTTCGAGAT+TGG - chr7_2:64648554-64648573 Msa1069110:CDS 30.0%
ATTTATAAGGATCTTGAGCA+AGG - chr7_2:64648577-64648596 Msa1069110:CDS 30.0%
TTTATAAGGATCTTGAGCAA+GGG - chr7_2:64648578-64648597 Msa1069110:CDS 30.0%
AATGCTCTGCTAAATACTTC+TGG + chr7_2:64648433-64648452 None:intergenic 35.0%
! GAAGTATTTAGCAGAGCATT+TGG - chr7_2:64648433-64648452 Msa1069110:CDS 35.0%
TTGATTCTTGAAATGATCGG+AGG - chr7_2:64648496-64648515 Msa1069110:CDS 35.0%
GGAAAAAAGAACTATGACAC+TGG - chr7_2:64648517-64648536 Msa1069110:CDS 35.0%
AAAAAGAACTATGACACTGG+AGG - chr7_2:64648520-64648539 Msa1069110:CDS 35.0%
AAAAGAACTATGACACTGGA+GGG - chr7_2:64648521-64648540 Msa1069110:CDS 35.0%
TAATTGTTTGACAGTCTCAG+AGG - chr7_2:64648615-64648634 Msa1069110:CDS 35.0%
CTCAGAGGAAGAAAATGATA+TGG - chr7_2:64648630-64648649 Msa1069110:CDS 35.0%
ATATTACTCTGGTGAATCTG+TGG - chr7_2:64648659-64648678 Msa1069110:CDS 35.0%
TCTATTACTTTATCCATCGG+TGG + chr7_2:64648712-64648731 None:intergenic 35.0%
! GTATTTAGCAGAGCATTTGG+TGG - chr7_2:64648436-64648455 Msa1069110:CDS 40.0%
TCCATCAGACAGACCACCGA+TGG - chr7_2:64648696-64648715 Msa1069110:CDS 55.0%
TCCATCGGTGGTCTGTCTGA+TGG + chr7_2:64648700-64648719 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 64648424 64648762 64648424 ID=Msa1069110;Name=Msa1069110
chr7_2 mRNA 64648424 64648762 64648424 ID=Msa1069110-mRNA-1;Parent=Msa1069110;Name=Msa1069110-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|-1|0|1|-1|1|1|0|112
chr7_2 exon 64648424 64648762 64648424 ID=Msa1069110-mRNA-1:exon:13494;Parent=Msa1069110-mRNA-1
chr7_2 CDS 64648424 64648762 64648424 ID=Msa1069110-mRNA-1:cds;Parent=Msa1069110-mRNA-1
Gene Sequence

>Msa1069110

ATGGCGCCAGAAGTATTTAGCAGAGCATTTGGTGGAGTTTCTTACAAGTCTGATATATATAGCTTTGGCATGTTGATTCTTGAAATGATCGGAGGAAAAAAGAACTATGACACTGGAGGGTCGTGTACTTCTGAAATGTATTTTCGAGATTGGATTTATAAGGATCTTGAGCAAGGGAATAATAACTTTTTTAATTGTTTGACAGTCTCAGAGGAAGAAAATGATATGGTTAGAAATATTACTCTGGTGAATCTGTGGTGCATTCAAACAAATCCATCAGACAGACCACCGATGGATAAAGTAATAGAAATGTTGCAAGGACCACTTTCGTCAATATAA
Protein sequence

>Msa1069110

MAPEVFSRAFGGVSYKSDIYSFGMLILEMIGGKKNYDTGGSCTSEMYFRDWIYKDLEQGNNNFFNCLTVSEEENDMVRNITLVNLWCIQTNPSDRPPMDKVIEMLQGPLSSI*