AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1069590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1069590 MtrunA17_Chr7g0264171 95.254 611 28 1 1 611 1 610 0.0 1220
Msa1069590 MtrunA17_Chr1g0181211 54.531 618 247 12 22 619 18 621 0.0 620
Msa1069590 MtrunA17_Chr7g0264161 77.810 347 31 1 40 386 1 301 0.0 553
Msa1069590 MtrunA17_Chr2g0326761 52.834 547 224 11 21 555 1 525 0.0 543
Msa1069590 MtrunA17_Chr4g0028971 54.461 538 226 10 28 555 9 537 0.0 537
Msa1069590 MtrunA17_Chr1g0199681 49.313 582 232 17 22 566 85 640 3.54e-168 496
Msa1069590 MtrunA17_Chr3g0115271 41.825 526 252 18 27 537 15 501 3.54e-115 356
Msa1069590 MtrunA17_Chr5g0424931 39.612 515 227 17 26 513 14 471 1.01e-98 311
Msa1069590 MtrunA17_Chr5g0417281 33.159 573 256 18 26 556 6 493 5.88e-83 270
Msa1069590 MtrunA17_Chr5g0436761 35.991 439 205 10 26 452 7 381 3.66e-77 253
Msa1069590 MtrunA17_Chr1g0156321 33.693 463 229 12 24 462 36 444 2.10e-71 246
Msa1069590 MtrunA17_Chr4g0046371 38.422 393 179 11 27 406 34 376 2.73e-69 238
Msa1069590 MtrunA17_Chr1g0178011 32.877 438 226 9 26 455 7 384 2.24e-68 229
Msa1069590 MtrunA17_Chr2g0276781 36.000 425 213 10 23 440 15 387 1.42e-67 233
Msa1069590 MtrunA17_Chr2g0285461 35.646 418 209 11 26 434 18 384 2.37e-66 233
Msa1069590 MtrunA17_Chr7g0239061 35.507 414 203 12 31 434 14 373 6.48e-65 226
Msa1069590 MtrunA17_Chr5g0433301 35.589 399 198 10 26 415 19 367 2.31e-64 227
Msa1069590 MtrunA17_Chr8g0385791 36.232 414 202 12 31 435 59 419 2.78e-64 226
Msa1069590 MtrunA17_Chr3g0109391 35.750 400 196 11 26 415 21 369 7.78e-64 225
Msa1069590 MtrunA17_Chr2g0277461 34.709 412 196 15 28 430 10 357 1.15e-63 217
Msa1069590 MtrunA17_Chr8g0376771 35.407 418 209 12 26 434 18 383 1.96e-63 225
Msa1069590 MtrunA17_Chr5g0417211 34.913 401 173 12 28 414 9 335 2.19e-61 209
Msa1069590 MtrunA17_Chr2g0326281 34.353 425 202 11 31 427 56 431 6.00e-61 217
Msa1069590 MtrunA17_Chr2g0301251 36.573 391 189 9 26 408 18 357 8.41e-61 219
Msa1069590 MtrunA17_Chr4g0029671 35.280 411 199 10 31 425 54 413 8.84e-61 216
Msa1069590 MtrunA17_Chr4g0070181 33.492 421 211 11 26 435 18 380 1.32e-60 218
Msa1069590 MtrunA17_Chr8g0346711 35.280 411 204 10 25 427 23 379 6.50e-60 212
Msa1069590 MtrunA17_Chr2g0289221 47.248 218 91 5 28 231 17 224 4.01e-57 196
Msa1069590 MtrunA17_Chr8g0389081 47.222 216 102 3 28 235 29 240 7.07e-57 207
Msa1069590 MtrunA17_Chr8g0389081 38.000 100 59 3 312 409 271 369 1.53e-11 67.8
Msa1069590 MtrunA17_Chr4g0009751 34.217 415 210 11 29 433 17 378 7.09e-57 202
Msa1069590 MtrunA17_Chr2g0282961 46.262 214 104 3 27 232 49 259 1.02e-51 188
Msa1069590 MtrunA17_Chr2g0282961 35.455 110 66 3 298 406 282 387 2.21e-14 76.3
Msa1069590 MtrunA17_Chr5g0425261 31.671 401 191 13 28 413 9 341 1.70e-49 176
Msa1069590 MtrunA17_Chr5g0424801 31.139 395 190 12 28 407 9 336 9.97e-49 174
Msa1069590 MtrunA17_Chr5g0424741 28.107 523 248 18 26 476 7 473 7.52e-43 161
Msa1069590 MtrunA17_Chr5g0425661 35.644 202 112 3 27 219 33 225 2.56e-37 139
Msa1069590 MtrunA17_Chr2g0277531 38.498 213 117 7 28 231 17 224 1.43e-36 139
Msa1069590 MtrunA17_Chr8g0356211 29.595 321 158 12 139 454 2 259 8.11e-31 122
Msa1069590 MtrunA17_Chr5g0425651 36.585 123 68 4 301 415 1 121 8.09e-18 80.1
Msa1069590 MtrunA17_Chr5g0424791 32.026 153 89 5 77 227 12 151 6.39e-15 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1069590 AT4G30080.1 54.737 475 182 12 26 487 14 468 5.15e-167 492
Msa1069590 AT2G28350.2 46.777 605 263 16 26 600 5 580 3.56e-163 482
Msa1069590 AT2G28350.1 46.777 605 263 16 26 600 5 580 4.59e-163 483
Msa1069590 AT1G77850.1 38.043 552 304 10 25 563 13 539 1.17e-113 352
Msa1069590 AT1G77850.2 38.043 552 304 10 25 563 13 539 1.58e-113 352
Msa1069590 AT1G19850.1 35.784 408 193 11 15 406 34 388 1.26e-68 240
Msa1069590 AT1G19850.2 35.784 408 193 11 15 406 23 377 1.49e-68 239
Msa1069590 AT1G30330.3 35.520 442 221 12 1 434 1 386 2.25e-68 239
Msa1069590 AT1G30330.2 35.520 442 221 12 1 434 1 386 2.25e-68 239
Msa1069590 AT1G59750.4 34.489 519 270 16 31 536 22 483 1.70e-67 233
Msa1069590 AT1G30330.1 36.211 417 208 11 26 434 18 384 1.79e-67 237
Msa1069590 AT1G59750.1 34.357 521 273 17 31 536 22 488 1.87e-67 233
Msa1069590 AT1G59750.3 34.357 521 273 17 31 536 22 488 1.87e-67 233
Msa1069590 AT1G59750.2 34.674 522 267 18 31 536 22 485 4.30e-67 231
Msa1069590 AT5G62000.2 35.160 438 217 11 2 425 26 410 9.59e-66 231
Msa1069590 AT5G62000.5 35.160 438 217 11 2 425 26 410 9.59e-66 231
Msa1069590 AT5G62000.3 35.160 438 217 11 2 425 26 410 9.59e-66 231
Msa1069590 AT5G62000.1 35.160 438 217 11 2 425 26 410 9.59e-66 231
Msa1069590 AT5G62000.4 35.160 438 217 11 2 425 26 410 1.15e-65 231
Msa1069590 AT5G60450.2 34.532 417 210 10 22 424 32 399 1.59e-65 229
Msa1069590 AT5G37020.2 35.500 400 197 11 26 415 17 365 2.15e-65 229
Msa1069590 AT5G37020.1 35.500 400 197 11 26 415 17 365 2.94e-65 229
Msa1069590 AT5G60450.1 34.804 408 203 10 31 424 65 423 6.66e-65 228
Msa1069590 AT2G33860.1 32.974 464 239 14 31 475 54 464 5.08e-64 222
Msa1069590 AT3G61830.1 33.875 431 214 12 31 451 25 394 9.01e-61 213
Msa1069590 AT2G46530.1 34.456 386 187 10 31 406 21 350 6.90e-60 211
Msa1069590 AT2G46530.3 34.456 386 187 10 31 406 42 371 1.20e-59 210
Msa1069590 AT1G34310.1 34.815 405 203 9 28 427 24 372 3.00e-58 206
Msa1069590 AT1G35520.1 34.230 409 206 9 31 434 27 377 9.42e-58 204
Msa1069590 AT1G35240.1 33.902 410 206 10 31 434 27 377 2.45e-57 203
Msa1069590 AT1G34410.1 34.063 411 204 10 31 434 27 377 6.99e-56 200
Msa1069590 AT1G35540.1 33.835 399 204 9 31 424 27 370 7.68e-55 197
Msa1069590 AT1G19220.1 45.622 217 107 3 26 235 18 230 2.86e-54 200
Msa1069590 AT1G19220.1 36.220 127 78 3 312 437 261 385 6.74e-14 75.9
Msa1069590 AT5G20730.3 43.318 217 112 3 26 235 19 231 9.39e-53 196
Msa1069590 AT5G20730.3 34.375 128 80 4 312 437 262 387 5.28e-12 69.7
Msa1069590 AT5G20730.1 43.318 217 112 3 26 235 19 231 1.09e-52 196
Msa1069590 AT5G20730.1 34.375 128 80 4 312 437 262 387 4.32e-12 70.1
Msa1069590 AT5G20730.2 43.318 217 112 3 26 235 19 231 1.18e-52 196
Msa1069590 AT5G20730.2 33.858 127 81 3 312 437 262 386 6.14e-13 72.8
Msa1069590 AT4G23980.2 30.676 414 226 10 31 436 12 372 7.66e-51 186
Msa1069590 AT4G23980.1 31.343 402 215 10 31 424 12 360 8.69e-51 186
Msa1069590 AT1G34170.1 32.187 407 210 10 9 406 3 352 5.12e-50 181
Msa1069590 AT3G61830.2 34.174 357 170 10 73 425 22 317 7.52e-50 182
Msa1069590 AT1G34390.1 32.266 406 204 10 31 427 27 370 1.75e-47 176
Msa1069590 AT5G37020.3 36.934 287 132 7 131 415 31 270 3.40e-47 177
Msa1069590 AT2G33860.2 33.427 356 176 11 131 475 2 307 9.00e-47 171
Msa1069590 AT1G34170.2 30.958 407 189 10 9 406 3 326 9.96e-44 163
Msa1069590 AT1G34170.3 30.958 407 189 10 9 406 3 326 4.70e-43 163
Msa1069590 AT2G46530.2 34.173 278 132 6 130 406 36 263 1.97e-41 157
Msa1069590 AT1G43950.1 38.537 205 112 6 31 230 27 222 1.15e-34 131
Msa1069590 ATMG00940.1 33.537 164 93 3 218 381 1 148 1.52e-20 89.4
Msa1069590 AT3G25730.1 26.738 187 108 4 82 254 122 293 4.87e-12 68.2
Msa1069590 AT2G46870.1 37.113 97 60 1 123 219 27 122 7.70e-12 67.4
Msa1069590 AT1G13260.1 30.882 136 75 3 118 251 175 293 8.13e-11 64.3

Find 151 sgRNAs with CRISPR-Local

Find 211 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAAGTTGGCATTGGAAAT+TGG 0.228346 7_2:+65283396 None:intergenic
TGGAATGAAAGACGGAATTT+TGG 0.237258 7_2:+65285105 None:intergenic
CATCAACGTGTCTGAAATTA+AGG 0.241218 7_2:-65284963 Msa1069590:CDS
TGGCCATCAATTGGGAAATC+TGG 0.249420 7_2:+65283416 None:intergenic
GGCATTTCAGGCACGTTTAT+AGG 0.250063 7_2:-65284775 Msa1069590:CDS
GCATTTCAGGCACGTTTATA+GGG 0.272489 7_2:-65284774 Msa1069590:CDS
CTTGTGAAAACTTCTTTAAT+TGG 0.278075 7_2:-65284338 Msa1069590:CDS
CAGCTATGGCATGCCGTTGC+AGG 0.280375 7_2:-65285226 Msa1069590:CDS
ATGGCGAAAAGTGGCATTTC+AGG 0.309403 7_2:-65284787 Msa1069590:CDS
CGGAACTATTGCTTCTGTTC+AGG 0.311558 7_2:-65284228 Msa1069590:CDS
GTTGGAGTCGATCCTTTGTT+AGG 0.313766 7_2:-65284605 Msa1069590:CDS
CTCCCAGATTTCCCAATTGA+TGG 0.331554 7_2:-65283419 Msa1069590:CDS
TTAGGATTTAGAAGGTTGTT+TGG 0.339574 7_2:+65283374 None:intergenic
TTCAGCTAACCCTCCTCTTC+AGG 0.348707 7_2:-65284831 Msa1069590:CDS
TTGGAATATTAGGATTTAGA+AGG 0.349891 7_2:+65283366 None:intergenic
TTGGAATTCGGAGGGCTAAA+AGG 0.350812 7_2:-65284637 Msa1069590:CDS
TATTATTATTAAACGGTTGT+TGG 0.355810 7_2:+65283228 None:intergenic
ATTGGAAATTGGCCATCAAT+TGG 0.356580 7_2:+65283407 None:intergenic
CATGCCGGCAGGACTAGTTT+CGG 0.360765 7_2:+65283331 None:intergenic
AGAAGGTTGTTTGGAAAAGT+TGG 0.365277 7_2:+65283383 None:intergenic
TGGAAATCTGGTAGTGGAAT+TGG 0.365957 7_2:-65284581 Msa1069590:CDS
CTGCGAATGTTTCTTCGCAT+TGG 0.366575 7_2:+65282925 None:intergenic
CAGTGTCGACTTGTATTGTT+TGG 0.368403 7_2:+65283054 None:intergenic
AATGGAAGATTATGAAAATC+TGG 0.372719 7_2:+65283272 None:intergenic
TTTGCAATGCCAAGTTATTA+GGG 0.373972 7_2:+65283183 None:intergenic
TCAAGGATAAGTTGGTTTAT+CGG 0.374081 7_2:-65284248 Msa1069590:CDS
GGAGCCAGGCATGGTCATTT+CGG 0.375741 7_2:-65283305 Msa1069590:CDS
TTTGATAATGATGGTGTTGC+TGG 0.376636 7_2:-65284986 Msa1069590:CDS
CTAACTTGGTTAATATTCAT+AGG 0.385591 7_2:+65285010 None:intergenic
AAGAGGCATTTGTTGACAAC+TGG 0.392584 7_2:-65284743 Msa1069590:CDS
CCTTTGTTAGGGTGGAAATC+TGG 0.395570 7_2:-65284593 Msa1069590:CDS
GGTAATCTCAATTTCTTCCT+TGG 0.395833 7_2:+65283446 None:intergenic
TTGGAACAGCACTTCAGATT+AGG 0.401029 7_2:-65284319 Msa1069590:CDS
GCGATCTTCATGTTGGAATT+CGG 0.404653 7_2:-65284649 Msa1069590:CDS
CTGGCTCCCTGCATGCCGGC+AGG 0.407927 7_2:+65283320 None:intergenic
GCCATCTTGAACCTCATTCC+AGG 0.409391 7_2:+65284290 None:intergenic
TTAAACGGTTGTTGGAAACT+AGG 0.416552 7_2:+65283236 None:intergenic
AACTAGTCCTGCCGGCATGC+AGG 0.419630 7_2:-65283327 Msa1069590:CDS
CAATCCAACTGAGATGAATA+TGG 0.421601 7_2:-65285293 Msa1069590:CDS
AAAACATGTGAGTTAACTTC+TGG 0.421701 7_2:+65285187 None:intergenic
AGCGACAAGAAACTTGCGTC+TGG 0.427650 7_2:-65284704 Msa1069590:CDS
TTGGAAATTGGCCATCAATT+GGG 0.428714 7_2:+65283408 None:intergenic
TGCACAATCTTCAGAGAAAC+CGG 0.428735 7_2:-65283111 Msa1069590:CDS
GTCGCAATATTATTATTAAA+CGG 0.430671 7_2:+65283221 None:intergenic
CTTATTGCTTCAACTCTACA+TGG 0.431451 7_2:+65285085 None:intergenic
CTGCCGGCATGCAGGGAGCC+AGG 0.432868 7_2:-65283319 Msa1069590:CDS
ACATTAGAGATGAAACATTC+AGG 0.433701 7_2:-65282897 Msa1069590:intron
GAAATGTTCTCACTGGTGTT+CGG 0.434122 7_2:+65283158 None:intergenic
AGTTGAAGCAATAAGATATA+TGG 0.445009 7_2:-65285077 Msa1069590:CDS
CTAGGCTGAAAGAGACCTAA+TGG 0.448362 7_2:+65283254 None:intergenic
CATCATTATCAAAACTAACT+TGG 0.449861 7_2:+65284996 None:intergenic
TGATGAGTCCTCAGTTTCAA+TGG 0.449908 7_2:+65284268 None:intergenic
GATAATAAACTTCGAAGAAA+CGG 0.452871 7_2:-65284506 Msa1069590:CDS
GCTAATAAGTGATGGAATGA+TGG 0.454476 7_2:-65284468 Msa1069590:CDS
GTTGTCAACAAATGCCTCTT+CGG 0.456311 7_2:+65284746 None:intergenic
ATGCCGGCAGGACTAGTTTC+GGG 0.456648 7_2:+65283332 None:intergenic
TTCTTCCTTGGCGGTATGAA+AGG 0.458131 7_2:+65283458 None:intergenic
CGCCGAGCATGCATGTGAAC+CGG 0.459270 7_2:-65285146 Msa1069590:CDS
AGTTTCTTGTCGCTGACAAA+AGG 0.461470 7_2:+65284713 None:intergenic
GTGGTTTATTATCCTCGGTC+AGG 0.470650 7_2:-65284374 Msa1069590:CDS
CACCGGTTCACATGCATGCT+CGG 0.471821 7_2:+65285144 None:intergenic
AAGTGATGGAATGATGGGTA+GGG 0.472687 7_2:-65284462 Msa1069590:CDS
GACTCCATATTCATCTCAGT+TGG 0.472803 7_2:+65285289 None:intergenic
TTGGAGTCGATCCTTTGTTA+GGG 0.473989 7_2:-65284604 Msa1069590:CDS
ATTTGTCCTGCACCACCTTA+CGG 0.476461 7_2:-65284557 Msa1069590:CDS
CGAAGAAACGGTAAAGGTAA+TGG 0.476494 7_2:-65284494 Msa1069590:CDS
TTGATGTGGTTTATTATCCT+CGG 0.489017 7_2:-65284379 Msa1069590:CDS
TTGTTTGGAAAAGTTGGCAT+TGG 0.489751 7_2:+65283389 None:intergenic
GGATAATAAACCACATCAAA+CGG 0.491751 7_2:+65284383 None:intergenic
GGCCATCAATTGGGAAATCT+GGG 0.492331 7_2:+65283417 None:intergenic
AGGACTCATCAAGGATAAGT+TGG 0.493550 7_2:-65284256 Msa1069590:CDS
CTTCAGATTAGGTGGTGTCC+TGG 0.494054 7_2:-65284308 Msa1069590:CDS
TGGTGCGGCTTTGCATGATC+CGG 0.495348 7_2:+65283092 None:intergenic
AATCTCAATTTCTTCCTTGG+CGG 0.497432 7_2:+65283449 None:intergenic
CATCAGATGTACGTGTCGGC+AGG 0.505339 7_2:+65282973 None:intergenic
TAAGTGATGGAATGATGGGT+AGG 0.517866 7_2:-65284463 Msa1069590:CDS
TTCAGGCTGCTGATCCGTCA+TGG 0.519149 7_2:-65284211 Msa1069590:CDS
ACTAGTCCTGCCGGCATGCA+GGG 0.520362 7_2:-65283326 Msa1069590:CDS
ATCTTCATGTTGGAATTCGG+AGG 0.523611 7_2:-65284646 Msa1069590:CDS
GATGACTGTCCCTAATAACT+TGG 0.526305 7_2:-65283192 Msa1069590:CDS
GGCATGCAGGGAGCCAGGCA+TGG 0.527776 7_2:-65283314 Msa1069590:CDS
AAGACCGAAATGACCATGCC+TGG 0.532259 7_2:+65283301 None:intergenic
AATCCTCCGTAAGGTGGTGC+AGG 0.533772 7_2:+65284551 None:intergenic
TTAGGGTGGAAATCTGGTAG+TGG 0.537403 7_2:-65284587 Msa1069590:CDS
AGCGTTTCTGCACAATATCT+AGG 0.540389 7_2:+65284872 None:intergenic
GCGACAAGAAACTTGCGTCT+GGG 0.540853 7_2:-65284703 Msa1069590:CDS
GGCGGTATGAAAGGCGAAAG+AGG 0.541655 7_2:+65283467 None:intergenic
GAGTAAGCACTGAAATTCAC+CGG 0.548533 7_2:+65285127 None:intergenic
AGGATGTTCATGGCGAAAAG+TGG 0.550349 7_2:-65284796 Msa1069590:CDS
CGACAAGAAACTTGCGTCTG+GGG 0.550603 7_2:-65284702 Msa1069590:CDS
AATGGATTGCTAATAAGTGA+TGG 0.550837 7_2:-65284476 Msa1069590:CDS
TTACCCGAAACTAGTCCTGC+CGG 0.553790 7_2:-65283335 Msa1069590:CDS
AAGATTATGAAAATCTGGTA+AGG 0.555027 7_2:+65283277 None:intergenic
GCTAAAAGGCGAAATAATGT+TGG 0.555377 7_2:-65284623 Msa1069590:CDS
ATGCCTGGCTCCCTGCATGC+CGG 0.557141 7_2:+65283316 None:intergenic
GTGATGGAATGATGGGTAGG+GGG 0.558347 7_2:-65284460 Msa1069590:CDS
CATTTCAGGCACGTTTATAG+GGG 0.562067 7_2:-65284773 Msa1069590:CDS
TTGCACCATTCCTCCTGCAA+CGG 0.567997 7_2:+65285213 None:intergenic
AGTGATGGAATGATGGGTAG+GGG 0.568376 7_2:-65284461 Msa1069590:CDS
GGCATTTGTTGACAACTGGA+TGG 0.569244 7_2:-65284739 Msa1069590:CDS
TTAGGTGGTGTCCTGGAATG+AGG 0.569864 7_2:-65284301 Msa1069590:CDS
ATTGGGAAATCTGGGAGTTG+AGG 0.570713 7_2:+65283425 None:intergenic
TTGAAACTGAGGACTCATCA+AGG 0.572823 7_2:-65284265 Msa1069590:CDS
AAACTTCGAAGAAACGGTAA+AGG 0.575815 7_2:-65284500 Msa1069590:CDS
GAGACTTCATCAGAAAAGCT+AGG 0.576418 7_2:-65282794 Msa1069590:CDS
AACGATGGAAATCCTCCGTA+AGG 0.577357 7_2:+65284542 None:intergenic
GAAAACGGCGATCTTCATGT+TGG 0.577451 7_2:-65284656 Msa1069590:CDS
AGAGTGTGGACCCTCAGCTA+TGG 0.582931 7_2:-65285240 Msa1069590:CDS
GAGTCGATCCTTTGTTAGGG+TGG 0.585067 7_2:-65284601 Msa1069590:CDS
CTATGGCATGCCGTTGCAGG+AGG 0.585809 7_2:-65285223 Msa1069590:CDS
TAATATGCAGCCGTTTGATG+TGG 0.585844 7_2:-65284393 Msa1069590:CDS
AAGTTATTAGGGACAGTCAT+CGG 0.589613 7_2:+65283194 None:intergenic
CTAATAAGTGATGGAATGAT+GGG 0.591799 7_2:-65284467 Msa1069590:CDS
GCAACGGCATGCCATAGCTG+AGG 0.591988 7_2:+65285229 None:intergenic
GCATGCTCGGCGTGACCCTG+AGG 0.592711 7_2:+65285157 None:intergenic
CATGCTCGGCGTGACCCTGA+GGG 0.593580 7_2:+65285158 None:intergenic
CGTCATGGTCTGATTCTATG+TGG 0.597184 7_2:-65284196 Msa1069590:CDS
GTTTGCATCAGATTGTGTCA+AGG 0.603398 7_2:+65284916 None:intergenic
CGAGCATGAAATGTTCTCAC+TGG 0.604009 7_2:+65283151 None:intergenic
GCATGCCGTTGCAGGAGGAA+TGG 0.606658 7_2:-65285218 Msa1069590:CDS
ATGAAGTGTATGCAAAACTC+AGG 0.607388 7_2:-65285039 Msa1069590:CDS
GATACTATTTCAACTTGCCA+CGG 0.610748 7_2:+65283506 None:intergenic
GCGGTATGAAAGGCGAAAGA+GGG 0.612138 7_2:+65283468 None:intergenic
ACTCTACATGGAATGAAAGA+CGG 0.613123 7_2:+65285097 None:intergenic
CAACGGCATGCCATAGCTGA+GGG 0.613865 7_2:+65285230 None:intergenic
TCCTGGAATGAGGTTCAAGA+TGG 0.614384 7_2:-65284291 Msa1069590:CDS
TCTTCATGTTGGAATTCGGA+GGG 0.615735 7_2:-65284645 Msa1069590:CDS
TTTCGCCTTTCATACCGCCA+AGG 0.619271 7_2:-65283463 Msa1069590:CDS
TCTTCCTCTCCCGAAAACGA+TGG 0.620463 7_2:+65284527 None:intergenic
GAACAGCACTTCAGATTAGG+TGG 0.620797 7_2:-65284316 Msa1069590:CDS
TTTATAGGGGAACGCCGAAG+AGG 0.625074 7_2:-65284760 Msa1069590:CDS
GTTATTGAAGCAATAAAACT+CGG 0.633322 7_2:-65284419 Msa1069590:CDS
CCAGATTTCCACCCTAACAA+AGG 0.634082 7_2:+65284593 None:intergenic
CTCTCATCAGATGTACGTGT+CGG 0.637287 7_2:+65282969 None:intergenic
CAAGATGGCCATTGAAACTG+AGG 0.643200 7_2:-65284276 Msa1069590:CDS
AAAGGCGAAAGAGGGATCGA+AGG 0.643435 7_2:+65283476 None:intergenic
GATGGAAATCCTCCGTAAGG+TGG 0.645097 7_2:+65284545 None:intergenic
TTCTATGTGGAGACTTCTCG+AGG 0.645176 7_2:-65284183 Msa1069590:intron
ATGTGAAAAGAGTGAATCCG+TGG 0.650057 7_2:-65283523 Msa1069590:CDS
CAAACAATACAAGTCGACAC+TGG 0.651728 7_2:-65283053 Msa1069590:CDS
TCTGATGCAAACAATGGTGG+TGG 0.655667 7_2:-65284905 Msa1069590:CDS
CAATGCGAAGAAACATTCGC+AGG 0.655730 7_2:-65282924 Msa1069590:CDS
CATCTGATGAGAGGTTCGAG+TGG 0.680653 7_2:-65282959 Msa1069590:CDS
TGTCCTGCACCACCTTACGG+AGG 0.685773 7_2:-65284554 Msa1069590:CDS
CACATAGAATCAGACCATGA+CGG 0.689130 7_2:+65284197 None:intergenic
CGACACGTACATCTGATGAG+AGG 0.689516 7_2:-65282968 Msa1069590:CDS
ACTTCATCAGAAAAGCTAGG+AGG 0.691502 7_2:-65282791 Msa1069590:CDS
ACACAATCTGATGCAAACAA+TGG 0.696099 7_2:-65284911 Msa1069590:CDS
CAATCTGATGCAAACAATGG+TGG 0.722659 7_2:-65284908 Msa1069590:CDS
AACTCAGGAGTACCTGACCG+AGG 0.728041 7_2:+65284362 None:intergenic
TTAGCTGAATAGTCCAAACG+AGG 0.756003 7_2:+65284845 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAAATTGGAATATT+AGG + chr7_2:65284750-65284769 None:intergenic 10.0%
!!! GTTAGATTTTACTTATATTT+TGG - chr7_2:65284046-65284065 Msa1069590:intron 15.0%
!!! TTTTAGCAAATTCTAATAAT+AGG + chr7_2:65284235-65284254 None:intergenic 15.0%
!! TTAATGTATATATTTGTGTA+TGG - chr7_2:65284340-65284359 Msa1069590:CDS 15.0%
!! TAGTAATATATGCAATAAAA+AGG + chr7_2:65284457-65284476 None:intergenic 15.0%
!! TCAAGTAAATTAATTCTAGA+GGG + chr7_2:65283969-65283988 None:intergenic 20.0%
!!! GAATGTTTTGAGAATAATAA+CGG - chr7_2:65284006-65284025 Msa1069590:intron 20.0%
!! ATTCAAAGTAAAATATGTGA+AGG + chr7_2:65284302-65284321 None:intergenic 20.0%
!! TATTATTATTAAACGGTTGT+TGG + chr7_2:65284878-65284897 None:intergenic 20.0%
!! GTCGCAATATTATTATTAAA+CGG + chr7_2:65284885-65284904 None:intergenic 20.0%
! AGTTGAAGCAATAAGATATA+TGG - chr7_2:65283026-65283045 Msa1069590:CDS 25.0%
! CTAACTTGGTTAATATTCAT+AGG + chr7_2:65283096-65283115 None:intergenic 25.0%
! CATCATTATCAAAACTAACT+TGG + chr7_2:65283110-65283129 None:intergenic 25.0%
!!! CAAGTTAGTTTTGATAATGA+TGG - chr7_2:65283108-65283127 Msa1069590:CDS 25.0%
! GATAATAAACTTCGAAGAAA+CGG - chr7_2:65283597-65283616 Msa1069590:intron 25.0%
! GTTATTGAAGCAATAAAACT+CGG - chr7_2:65283684-65283703 Msa1069590:intron 25.0%
! CTTGTGAAAACTTCTTTAAT+TGG - chr7_2:65283765-65283784 Msa1069590:intron 25.0%
! CTCAAGTAAATTAATTCTAG+AGG + chr7_2:65283970-65283989 None:intergenic 25.0%
!! TGATTTGTATAAATTCCACA+AGG + chr7_2:65284116-65284135 None:intergenic 25.0%
! AACTTAAAAGGATTATGCTT+TGG + chr7_2:65284185-65284204 None:intergenic 25.0%
!! TTTTCATCAGTACCATAAAT+TGG - chr7_2:65284203-65284222 Msa1069590:CDS 25.0%
! GTATGGTAATATAGATACAA+TGG - chr7_2:65284357-65284376 Msa1069590:CDS 25.0%
! TCTCTTCTTACAATTTCATT+AGG + chr7_2:65284396-65284415 None:intergenic 25.0%
!!! TTTCTGATGTCATACTTTTT+AGG - chr7_2:65284527-65284546 Msa1069590:CDS 25.0%
!!! TCATACTTTTTAGGTTACAT+GGG - chr7_2:65284536-65284555 Msa1069590:CDS 25.0%
!!! TTCACATTTTTAAGTATCTC+AGG + chr7_2:65284567-65284586 None:intergenic 25.0%
! TTGGAATATTAGGATTTAGA+AGG + chr7_2:65284740-65284759 None:intergenic 25.0%
!! GTTTCGGGTAAATAAAAAAT+TGG + chr7_2:65284759-65284778 None:intergenic 25.0%
! AAGATTATGAAAATCTGGTA+AGG + chr7_2:65284829-65284848 None:intergenic 25.0%
! AATGGAAGATTATGAAAATC+TGG + chr7_2:65284834-65284853 None:intergenic 25.0%
!! GATTTTCATAATCTTCCATT+AGG - chr7_2:65284834-65284853 Msa1069590:CDS 25.0%
!!! ATGATTAGTCATTTTCTTCT+CGG + chr7_2:65285087-65285106 None:intergenic 25.0%
AAAACATGTGAGTTAACTTC+TGG + chr7_2:65282919-65282938 None:intergenic 30.0%
!!! GTGTTTTTGAGATCTGAAAA+CGG - chr7_2:65283432-65283451 Msa1069590:CDS 30.0%
!! AATGGATTGCTAATAAGTGA+TGG - chr7_2:65283627-65283646 Msa1069590:intron 30.0%
! CTAATAAGTGATGGAATGAT+GGG - chr7_2:65283636-65283655 Msa1069590:intron 30.0%
GGATAATAAACCACATCAAA+CGG + chr7_2:65283723-65283742 None:intergenic 30.0%
TTGATGTGGTTTATTATCCT+CGG - chr7_2:65283724-65283743 Msa1069590:intron 30.0%
!! TCAAGGATAAGTTGGTTTAT+CGG - chr7_2:65283855-65283874 Msa1069590:intron 30.0%
TTGCAAGAATACACATTCTA+TGG + chr7_2:65284150-65284169 None:intergenic 30.0%
!! GGTACTGATGAAAACTTAAA+AGG + chr7_2:65284197-65284216 None:intergenic 30.0%
AATAGGAAGCTTCCAATTTA+TGG + chr7_2:65284218-65284237 None:intergenic 30.0%
! TATGATAGTGATGTAGGTAT+AGG + chr7_2:65284260-65284279 None:intergenic 30.0%
! CTAATGTATGATAGTGATGT+AGG + chr7_2:65284266-65284285 None:intergenic 30.0%
CTACATCACTATCATACATT+AGG - chr7_2:65284264-65284283 Msa1069590:CDS 30.0%
TAGATACAATGGAACATTGT+TGG - chr7_2:65284368-65284387 Msa1069590:CDS 30.0%
TGACATCAGAAAATCATTCA+CGG + chr7_2:65284519-65284538 None:intergenic 30.0%
!!! GTCATACTTTTTAGGTTACA+TGG - chr7_2:65284535-65284554 Msa1069590:CDS 30.0%
TTAGGATTTAGAAGGTTGTT+TGG + chr7_2:65284732-65284751 None:intergenic 30.0%
TTTGCAATGCCAAGTTATTA+GGG + chr7_2:65284923-65284942 None:intergenic 30.0%
! TTTTGCAATGCCAAGTTATT+AGG + chr7_2:65284924-65284943 None:intergenic 30.0%
ACATTAGAGATGAAACATTC+AGG - chr7_2:65285206-65285225 Msa1069590:CDS 30.0%
CAATCCAACTGAGATGAATA+TGG - chr7_2:65282810-65282829 Msa1069590:intron 35.0%
GAAAAATGTGAACAAGAGTG+TGG - chr7_2:65282849-65282868 Msa1069590:intron 35.0%
! TGGAATGAAAGACGGAATTT+TGG + chr7_2:65283001-65283020 None:intergenic 35.0%
ACTCTACATGGAATGAAAGA+CGG + chr7_2:65283009-65283028 None:intergenic 35.0%
CTTATTGCTTCAACTCTACA+TGG + chr7_2:65283021-65283040 None:intergenic 35.0%
! GAGTTTTGCATACACTTCAT+CGG + chr7_2:65283064-65283083 None:intergenic 35.0%
ATGAAGTGTATGCAAAACTC+AGG - chr7_2:65283064-65283083 Msa1069590:CDS 35.0%
!! TTTGATAATGATGGTGTTGC+TGG - chr7_2:65283117-65283136 Msa1069590:CDS 35.0%
! CATCAACGTGTCTGAAATTA+AGG - chr7_2:65283140-65283159 Msa1069590:CDS 35.0%
ACACAATCTGATGCAAACAA+TGG - chr7_2:65283192-65283211 Msa1069590:CDS 35.0%
GAAAAATATCCTGAAGAGGA+GGG + chr7_2:65283284-65283303 None:intergenic 35.0%
TTGGGAAAAATATCCTGAAG+AGG + chr7_2:65283288-65283307 None:intergenic 35.0%
! TCTTCAGGATATTTTTCCCA+AGG - chr7_2:65283287-65283306 Msa1069590:CDS 35.0%
! ATTTTTCCCAAGGATGTTCA+TGG - chr7_2:65283297-65283316 Msa1069590:CDS 35.0%
GCTAAAAGGCGAAATAATGT+TGG - chr7_2:65283480-65283499 Msa1069590:CDS 35.0%
AAACTTCGAAGAAACGGTAA+AGG - chr7_2:65283603-65283622 Msa1069590:intron 35.0%
! GCTAATAAGTGATGGAATGA+TGG - chr7_2:65283635-65283654 Msa1069590:intron 35.0%
! GAAGTTTTCACAAGAAACTC+AGG + chr7_2:65283759-65283778 None:intergenic 35.0%
TTGTCATATAGCAGCTATAG+TGG - chr7_2:65284075-65284094 Msa1069590:intron 35.0%
GATACTATTTCAACTTGCCA+CGG + chr7_2:65284600-65284619 None:intergenic 35.0%
AATCTCAATTTCTTCCTTGG+CGG + chr7_2:65284657-65284676 None:intergenic 35.0%
GGTAATCTCAATTTCTTCCT+TGG + chr7_2:65284660-65284679 None:intergenic 35.0%
TTGGAAATTGGCCATCAATT+GGG + chr7_2:65284698-65284717 None:intergenic 35.0%
ATTGGAAATTGGCCATCAAT+TGG + chr7_2:65284699-65284718 None:intergenic 35.0%
! GAAAAGTTGGCATTGGAAAT+TGG + chr7_2:65284710-65284729 None:intergenic 35.0%
TTGTTTGGAAAAGTTGGCAT+TGG + chr7_2:65284717-65284736 None:intergenic 35.0%
AGAAGGTTGTTTGGAAAAGT+TGG + chr7_2:65284723-65284742 None:intergenic 35.0%
TTAAACGGTTGTTGGAAACT+AGG + chr7_2:65284870-65284889 None:intergenic 35.0%
AAGTTATTAGGGACAGTCAT+CGG + chr7_2:65284912-65284931 None:intergenic 35.0%
GACTCCATATTCATCTCAGT+TGG + chr7_2:65282817-65282836 None:intergenic 40.0%
! ACATGTTTTCTACTTCCCTC+AGG - chr7_2:65282930-65282949 Msa1069590:CDS 40.0%
! CATGTTTTCTACTTCCCTCA+GGG - chr7_2:65282931-65282950 Msa1069590:CDS 40.0%
!! GAGTAAGCACTGAAATTCAC+CGG + chr7_2:65282979-65282998 None:intergenic 40.0%
GTTTGCATCAGATTGTGTCA+AGG + chr7_2:65283190-65283209 None:intergenic 40.0%
CAATCTGATGCAAACAATGG+TGG - chr7_2:65283195-65283214 Msa1069590:CDS 40.0%
AGCGTTTCTGCACAATATCT+AGG + chr7_2:65283234-65283253 None:intergenic 40.0%
!!! AGAAACGCTTTTTCCTCGTT+TGG - chr7_2:65283245-65283264 Msa1069590:CDS 40.0%
TTAGCTGAATAGTCCAAACG+AGG + chr7_2:65283261-65283280 None:intergenic 40.0%
GGAAAAATATCCTGAAGAGG+AGG + chr7_2:65283285-65283304 None:intergenic 40.0%
! TTTTCGCCATGAACATCCTT+GGG + chr7_2:65283306-65283325 None:intergenic 40.0%
GCATTTCAGGCACGTTTATA+GGG - chr7_2:65283329-65283348 Msa1069590:CDS 40.0%
CATTTCAGGCACGTTTATAG+GGG - chr7_2:65283330-65283349 Msa1069590:CDS 40.0%
GTTGTCAACAAATGCCTCTT+CGG + chr7_2:65283360-65283379 None:intergenic 40.0%
!! AAGAGGCATTTGTTGACAAC+TGG - chr7_2:65283360-65283379 Msa1069590:CDS 40.0%
AGTTTCTTGTCGCTGACAAA+AGG + chr7_2:65283393-65283412 None:intergenic 40.0%
GCGATCTTCATGTTGGAATT+CGG - chr7_2:65283454-65283473 Msa1069590:CDS 40.0%
ATCTTCATGTTGGAATTCGG+AGG - chr7_2:65283457-65283476 Msa1069590:CDS 40.0%
TCTTCATGTTGGAATTCGGA+GGG - chr7_2:65283458-65283477 Msa1069590:CDS 40.0%
TTGGAGTCGATCCTTTGTTA+GGG - chr7_2:65283499-65283518 Msa1069590:CDS 40.0%
!! TGGAAATCTGGTAGTGGAAT+TGG - chr7_2:65283522-65283541 Msa1069590:CDS 40.0%
CGAAGAAACGGTAAAGGTAA+TGG - chr7_2:65283609-65283628 Msa1069590:intron 40.0%
!! TAAGTGATGGAATGATGGGT+AGG - chr7_2:65283640-65283659 Msa1069590:intron 40.0%
!! AAGTGATGGAATGATGGGTA+GGG - chr7_2:65283641-65283660 Msa1069590:intron 40.0%
TAATATGCAGCCGTTTGATG+TGG - chr7_2:65283710-65283729 Msa1069590:intron 40.0%
TTGGAACAGCACTTCAGATT+AGG - chr7_2:65283784-65283803 Msa1069590:intron 40.0%
TGATGAGTCCTCAGTTTCAA+TGG + chr7_2:65283838-65283857 None:intergenic 40.0%
TTGAAACTGAGGACTCATCA+AGG - chr7_2:65283838-65283857 Msa1069590:intron 40.0%
AGGACTCATCAAGGATAAGT+TGG - chr7_2:65283847-65283866 Msa1069590:intron 40.0%
CACATAGAATCAGACCATGA+CGG + chr7_2:65283909-65283928 None:intergenic 40.0%
CACTATATTGCTATGCCTTG+TGG - chr7_2:65284098-65284117 Msa1069590:intron 40.0%
TAAAATATGTGAAGGCCCTC+GGG + chr7_2:65284294-65284313 None:intergenic 40.0%
GTAAAATATGTGAAGGCCCT+CGG + chr7_2:65284295-65284314 None:intergenic 40.0%
ATCATTCACGGCTGAAACAA+AGG + chr7_2:65284507-65284526 None:intergenic 40.0%
ATGTGAAAAGAGTGAATCCG+TGG - chr7_2:65284580-65284599 Msa1069590:CDS 40.0%
GATGACTGTCCCTAATAACT+TGG - chr7_2:65284911-65284930 Msa1069590:CDS 40.0%
GAAATGTTCTCACTGGTGTT+CGG + chr7_2:65284948-65284967 None:intergenic 40.0%
TGCACAATCTTCAGAGAAAC+CGG - chr7_2:65284992-65285011 Msa1069590:CDS 40.0%
! TTTGGCCAAAAAGCACAAGT+TGG + chr7_2:65285034-65285053 None:intergenic 40.0%
!! CAGTGTCGACTTGTATTGTT+TGG + chr7_2:65285052-65285071 None:intergenic 40.0%
CAAACAATACAAGTCGACAC+TGG - chr7_2:65285050-65285069 Msa1069590:CDS 40.0%
GAGACTTCATCAGAAAAGCT+AGG - chr7_2:65285309-65285328 Msa1069590:CDS 40.0%
ACTTCATCAGAAAAGCTAGG+AGG - chr7_2:65285312-65285331 Msa1069590:CDS 40.0%
TCTGATGCAAACAATGGTGG+TGG - chr7_2:65283198-65283217 Msa1069590:CDS 45.0%
! CTTTTCGCCATGAACATCCT+TGG + chr7_2:65283307-65283326 None:intergenic 45.0%
AGGATGTTCATGGCGAAAAG+TGG - chr7_2:65283307-65283326 Msa1069590:CDS 45.0%
ATGGCGAAAAGTGGCATTTC+AGG - chr7_2:65283316-65283335 Msa1069590:CDS 45.0%
GGCATTTCAGGCACGTTTAT+AGG - chr7_2:65283328-65283347 Msa1069590:CDS 45.0%
! GGCATTTGTTGACAACTGGA+TGG - chr7_2:65283364-65283383 Msa1069590:CDS 45.0%
GAAAACGGCGATCTTCATGT+TGG - chr7_2:65283447-65283466 Msa1069590:CDS 45.0%
TTGGAATTCGGAGGGCTAAA+AGG - chr7_2:65283466-65283485 Msa1069590:CDS 45.0%
GTTGGAGTCGATCCTTTGTT+AGG - chr7_2:65283498-65283517 Msa1069590:CDS 45.0%
CCAGATTTCCACCCTAACAA+AGG + chr7_2:65283513-65283532 None:intergenic 45.0%
CCTTTGTTAGGGTGGAAATC+TGG - chr7_2:65283510-65283529 Msa1069590:CDS 45.0%
TTAGGGTGGAAATCTGGTAG+TGG - chr7_2:65283516-65283535 Msa1069590:CDS 45.0%
ATTTGTCCTGCACCACCTTA+CGG - chr7_2:65283546-65283565 Msa1069590:CDS 45.0%
AACGATGGAAATCCTCCGTA+AGG + chr7_2:65283564-65283583 None:intergenic 45.0%
! CGGAGGATTTCCATCGTTTT+CGG - chr7_2:65283566-65283585 Msa1069590:intron 45.0%
! GGAGGATTTCCATCGTTTTC+GGG - chr7_2:65283567-65283586 Msa1069590:intron 45.0%
!! ATTTCCATCGTTTTCGGGAG+AGG - chr7_2:65283572-65283591 Msa1069590:intron 45.0%
!! AGTGATGGAATGATGGGTAG+GGG - chr7_2:65283642-65283661 Msa1069590:intron 45.0%
GTGGTTTATTATCCTCGGTC+AGG - chr7_2:65283729-65283748 Msa1069590:intron 45.0%
GAACAGCACTTCAGATTAGG+TGG - chr7_2:65283787-65283806 Msa1069590:intron 45.0%
TCCTGGAATGAGGTTCAAGA+TGG - chr7_2:65283812-65283831 Msa1069590:intron 45.0%
CAAGATGGCCATTGAAACTG+AGG - chr7_2:65283827-65283846 Msa1069590:intron 45.0%
CGGAACTATTGCTTCTGTTC+AGG - chr7_2:65283875-65283894 Msa1069590:intron 45.0%
CGTCATGGTCTGATTCTATG+TGG - chr7_2:65283907-65283926 Msa1069590:intron 45.0%
TTCTATGTGGAGACTTCTCG+AGG - chr7_2:65283920-65283939 Msa1069590:intron 45.0%
TCATACATTAGGTATCCCCG+AGG - chr7_2:65284275-65284294 Msa1069590:CDS 45.0%
CATACATTAGGTATCCCCGA+GGG - chr7_2:65284276-65284295 Msa1069590:CDS 45.0%
AAAATATGTGAAGGCCCTCG+GGG + chr7_2:65284293-65284312 None:intergenic 45.0%
TTCTTCCTTGGCGGTATGAA+AGG + chr7_2:65284648-65284667 None:intergenic 45.0%
ATTGGGAAATCTGGGAGTTG+AGG + chr7_2:65284681-65284700 None:intergenic 45.0%
CTCCCAGATTTCCCAATTGA+TGG - chr7_2:65284684-65284703 Msa1069590:CDS 45.0%
GGCCATCAATTGGGAAATCT+GGG + chr7_2:65284689-65284708 None:intergenic 45.0%
TGGCCATCAATTGGGAAATC+TGG + chr7_2:65284690-65284709 None:intergenic 45.0%
CTAGGCTGAAAGAGACCTAA+TGG + chr7_2:65284852-65284871 None:intergenic 45.0%
CGAGCATGAAATGTTCTCAC+TGG + chr7_2:65284955-65284974 None:intergenic 45.0%
!! CCAAAAAGCACAAGTTGGTG+CGG + chr7_2:65285029-65285048 None:intergenic 45.0%
CTCTCATCAGATGTACGTGT+CGG + chr7_2:65285137-65285156 None:intergenic 45.0%
CTGCGAATGTTTCTTCGCAT+TGG + chr7_2:65285181-65285200 None:intergenic 45.0%
CAATGCGAAGAAACATTCGC+AGG - chr7_2:65285179-65285198 Msa1069590:CDS 45.0%
TTGCACCATTCCTCCTGCAA+CGG + chr7_2:65282893-65282912 None:intergenic 50.0%
TTCAGCTAACCCTCCTCTTC+AGG - chr7_2:65283272-65283291 Msa1069590:CDS 50.0%
TTTATAGGGGAACGCCGAAG+AGG - chr7_2:65283343-65283362 Msa1069590:CDS 50.0%
AGCGACAAGAAACTTGCGTC+TGG - chr7_2:65283399-65283418 Msa1069590:CDS 50.0%
GCGACAAGAAACTTGCGTCT+GGG - chr7_2:65283400-65283419 Msa1069590:CDS 50.0%
CGACAAGAAACTTGCGTCTG+GGG - chr7_2:65283401-65283420 Msa1069590:CDS 50.0%
GAGTCGATCCTTTGTTAGGG+TGG - chr7_2:65283502-65283521 Msa1069590:CDS 50.0%
GATGGAAATCCTCCGTAAGG+TGG + chr7_2:65283561-65283580 None:intergenic 50.0%
TCTTCCTCTCCCGAAAACGA+TGG + chr7_2:65283579-65283598 None:intergenic 50.0%
!! GTGATGGAATGATGGGTAGG+GGG - chr7_2:65283643-65283662 Msa1069590:intron 50.0%
CTTCAGATTAGGTGGTGTCC+TGG - chr7_2:65283795-65283814 Msa1069590:intron 50.0%
TTAGGTGGTGTCCTGGAATG+AGG - chr7_2:65283802-65283821 Msa1069590:intron 50.0%
GCCATCTTGAACCTCATTCC+AGG + chr7_2:65283816-65283835 None:intergenic 50.0%
AAAGGCGAAAGAGGGATCGA+AGG + chr7_2:65284630-65284649 None:intergenic 50.0%
GCGGTATGAAAGGCGAAAGA+GGG + chr7_2:65284638-65284657 None:intergenic 50.0%
TTTCGCCTTTCATACCGCCA+AGG - chr7_2:65284640-65284659 Msa1069590:CDS 50.0%
TTACCCGAAACTAGTCCTGC+CGG - chr7_2:65284768-65284787 Msa1069590:CDS 50.0%
AAGACCGAAATGACCATGCC+TGG + chr7_2:65284805-65284824 None:intergenic 50.0%
! CCGCACCAACTTGTGCTTTT+TGG - chr7_2:65285026-65285045 Msa1069590:CDS 50.0%
CGACACGTACATCTGATGAG+AGG - chr7_2:65285135-65285154 Msa1069590:CDS 50.0%
CATCTGATGAGAGGTTCGAG+TGG - chr7_2:65285144-65285163 Msa1069590:CDS 50.0%
AGAGTGTGGACCCTCAGCTA+TGG - chr7_2:65282863-65282882 Msa1069590:intron 55.0%
CAACGGCATGCCATAGCTGA+GGG + chr7_2:65282876-65282895 None:intergenic 55.0%
!! CACCGGTTCACATGCATGCT+CGG + chr7_2:65282962-65282981 None:intergenic 55.0%
AATCCTCCGTAAGGTGGTGC+AGG + chr7_2:65283555-65283574 None:intergenic 55.0%
!! TGGAATGATGGGTAGGGGGA+AGG - chr7_2:65283647-65283666 Msa1069590:intron 55.0%
!! AACTCAGGAGTACCTGACCG+AGG + chr7_2:65283744-65283763 None:intergenic 55.0%
TTCAGGCTGCTGATCCGTCA+TGG - chr7_2:65283892-65283911 Msa1069590:intron 55.0%
GGCGGTATGAAAGGCGAAAG+AGG + chr7_2:65284639-65284658 None:intergenic 55.0%
!! ATGCCGGCAGGACTAGTTTC+GGG + chr7_2:65284774-65284793 None:intergenic 55.0%
!! CATGCCGGCAGGACTAGTTT+CGG + chr7_2:65284775-65284794 None:intergenic 55.0%
GGAGCCAGGCATGGTCATTT+CGG - chr7_2:65284798-65284817 Msa1069590:CDS 55.0%
TGGTGCGGCTTTGCATGATC+CGG + chr7_2:65285014-65285033 None:intergenic 55.0%
! CATCAGATGTACGTGTCGGC+AGG + chr7_2:65285133-65285152 None:intergenic 55.0%
GCAACGGCATGCCATAGCTG+AGG + chr7_2:65282877-65282896 None:intergenic 60.0%
CAGCTATGGCATGCCGTTGC+AGG - chr7_2:65282877-65282896 Msa1069590:intron 60.0%
CTATGGCATGCCGTTGCAGG+AGG - chr7_2:65282880-65282899 Msa1069590:intron 60.0%
GCATGCCGTTGCAGGAGGAA+TGG - chr7_2:65282885-65282904 Msa1069590:intron 60.0%
CGCCGAGCATGCATGTGAAC+CGG - chr7_2:65282957-65282976 Msa1069590:CDS 60.0%
TGTCCTGCACCACCTTACGG+AGG - chr7_2:65283549-65283568 Msa1069590:CDS 60.0%
AACTAGTCCTGCCGGCATGC+AGG - chr7_2:65284776-65284795 Msa1069590:CDS 60.0%
ACTAGTCCTGCCGGCATGCA+GGG - chr7_2:65284777-65284796 Msa1069590:CDS 60.0%
CATGCTCGGCGTGACCCTGA+GGG + chr7_2:65282948-65282967 None:intergenic 65.0%
ATGCCTGGCTCCCTGCATGC+CGG + chr7_2:65284790-65284809 None:intergenic 65.0%
GCATGCTCGGCGTGACCCTG+AGG + chr7_2:65282949-65282968 None:intergenic 70.0%
GGCATGCAGGGAGCCAGGCA+TGG - chr7_2:65284789-65284808 Msa1069590:CDS 70.0%
CTGGCTCCCTGCATGCCGGC+AGG + chr7_2:65284786-65284805 None:intergenic 75.0%
CTGCCGGCATGCAGGGAGCC+AGG - chr7_2:65284784-65284803 Msa1069590:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 65282787 65285338 65282787 ID=Msa1069590;Name=Msa1069590
chr7_2 mRNA 65282787 65285338 65282787 ID=Msa1069590-mRNA-1;Parent=Msa1069590;Name=Msa1069590-mRNA-1;_AED=0.04;_eAED=0.06;_QI=0|0|0|1|1|1|3|0|620
chr7_2 exon 65284184 65285338 65284184 ID=Msa1069590-mRNA-1:exon:13761;Parent=Msa1069590-mRNA-1
chr7_2 exon 65282898 65283576 65282898 ID=Msa1069590-mRNA-1:exon:13760;Parent=Msa1069590-mRNA-1
chr7_2 exon 65282787 65282815 65282787 ID=Msa1069590-mRNA-1:exon:13759;Parent=Msa1069590-mRNA-1
chr7_2 CDS 65284184 65285338 65284184 ID=Msa1069590-mRNA-1:cds;Parent=Msa1069590-mRNA-1
chr7_2 CDS 65282898 65283576 65282898 ID=Msa1069590-mRNA-1:cds;Parent=Msa1069590-mRNA-1
chr7_2 CDS 65282787 65282815 65282787 ID=Msa1069590-mRNA-1:cds;Parent=Msa1069590-mRNA-1
Gene Sequence

>Msa1069590

ATGAAAGAAAAAAGAAAAGGTTGCAATCCAACTGAGATGAATATGGAGTCAAACAAGAAATTGAAAAATGTGAACAAGAGTGTGGACCCTCAGCTATGGCATGCCGTTGCAGGAGGAATGGTGCAAATGCCAGAAGTTAACTCACATGTTTTCTACTTCCCTCAGGGTCACGCCGAGCATGCATGTGAACCGGTGAATTTCAGTGCTTACTCCAAAATTCCGTCTTTCATTCCATGTAGAGTTGAAGCAATAAGATATATGGCTAATCATGAGACCGATGAAGTGTATGCAAAACTCAGGCTTGTTCCTATGAATATTAACCAAGTTAGTTTTGATAATGATGGTGTTGCTGGCATCAACGTGTCTGAAATTAAGGATAAACATCAATCTTTTGCAAAAACCTTGACACAATCTGATGCAAACAATGGTGGTGGCTTTTCTTGTCCTAGATATTGTGCAGAAACGCTTTTTCCTCGTTTGGACTATTCAGCTAACCCTCCTCTTCAGGATATTTTTCCCAAGGATGTTCATGGCGAAAAGTGGCATTTCAGGCACGTTTATAGGGGAACGCCGAAGAGGCATTTGTTGACAACTGGATGGAGTCCTTTTGTCAGCGACAAGAAACTTGCGTCTGGGGATTCGATTGTGTTTTTGAGATCTGAAAACGGCGATCTTCATGTTGGAATTCGGAGGGCTAAAAGGCGAAATAATGTTGGAGTCGATCCTTTGTTAGGGTGGAAATCTGGTAGTGGAATTGGAATTTGTCCTGCACCACCTTACGGAGGATTTCCATCGTTTTCGGGAGAGGAAGATAATAAACTTCGAAGAAACGGTAAAGGTAATGGATTGCTAATAAGTGATGGAATGATGGGTAGGGGGAAGGTGAAAGCTCTAGAAGTTATTGAAGCAATAAAACTCGGTACTAATATGCAGCCGTTTGATGTGGTTTATTATCCTCGGTCAGGTACTCCTGAGTTTCTTGTGAAAACTTCTTTAATTGGAACAGCACTTCAGATTAGGTGGTGTCCTGGAATGAGGTTCAAGATGGCCATTGAAACTGAGGACTCATCAAGGATAAGTTGGTTTATCGGAACTATTGCTTCTGTTCAGGCTGCTGATCCGTCATGGTCTGATTCTATGTGGAGACTTCTCGAGGTTACATGGGATGAACCTGAGATACTTAAAAATGTGAAAAGAGTGAATCCGTGGCAAGTTGAAATAGTATCGAACATGCCTTCGATCCCTCTTTCGCCTTTCATACCGCCAAGGAAGAAATTGAGATTACCTCAACTCCCAGATTTCCCAATTGATGGCCAATTTCCAATGCCAACTTTTCCAAACAACCTTCTAAATCCTAATATTCCAATTTTTTATTTACCCGAAACTAGTCCTGCCGGCATGCAGGGAGCCAGGCATGGTCATTTCGGTCTTACCTTACCAGATTTTCATAATCTTCCATTAGGTCTCTTTCAGCCTAGTTTCCAACAACCGTTTAATAATAATATTGCGACGATGCCGATGACTGTCCCTAATAACTTGGCATTGCAAAAGCCGAACACCAGTGAGAACATTTCATGCTCGCATTCGATATCAACTTCTGCACAATCTTCAGAGAAACCGGATCATGCAAAGCCGCACCAACTTGTGCTTTTTGGCCAAACAATACAAGTCGACACTGGAAATGAGAATTCCGAGAAGAAAATGACTAATCATTTGTCTGATTTTCATCTACAAAGCCTGCCGACACGTACATCTGATGAGAGGTTCGAGTGGAATGCTAAGAACCAATGCGAAGAAACATTCGCAGGAGAAACATTAGAGATGAAACATTCAGAGACTTCATCAGAAAAGCTAGGAGGTTGA
Protein sequence

>Msa1069590

MKEKRKGCNPTEMNMESNKKLKNVNKSVDPQLWHAVAGGMVQMPEVNSHVFYFPQGHAEHACEPVNFSAYSKIPSFIPCRVEAIRYMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSEIKDKHQSFAKTLTQSDANNGGGFSCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVSDKKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVDPLLGWKSGSGIGICPAPPYGGFPSFSGEEDNKLRRNGKGNGLLISDGMMGRGKVKALEVIEAIKLGTNMQPFDVVYYPRSGTPEFLVKTSLIGTALQIRWCPGMRFKMAIETEDSSRISWFIGTIASVQAADPSWSDSMWRLLEVTWDEPEILKNVKRVNPWQVEIVSNMPSIPLSPFIPPRKKLRLPQLPDFPIDGQFPMPTFPNNLLNPNIPIFYLPETSPAGMQGARHGHFGLTLPDFHNLPLGLFQPSFQQPFNNNIATMPMTVPNNLALQKPNTSENISCSHSISTSAQSSEKPDHAKPHQLVLFGQTIQVDTGNENSEKKMTNHLSDFHLQSLPTRTSDERFEWNAKNQCEETFAGETLEMKHSETSSEKLGG*