Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069700 | KEH23482.1 | 56.970 | 165 | 43 | 2 | 1 | 147 | 1 | 155 | 2.49e-51 | 175 |
| Msa1069700 | KEH23482.1 | 83.007 | 153 | 16 | 1 | 118 | 260 | 3 | 155 | 2.35e-86 | 264 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069700 | sp|Q9FY93|NAC83_ARATH | 33.088 | 136 | 82 | 4 | 112 | 238 | 1 | 136 | 1.86e-16 | 79.7 |
| Msa1069700 | sp|Q9FY93|NAC83_ARATH | 32.061 | 131 | 70 | 4 | 3 | 115 | 7 | 136 | 6.03e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069700 | A0A072U1D6 | 56.970 | 165 | 43 | 2 | 1 | 147 | 1 | 155 | 1.19e-51 | 175 |
| Msa1069700 | A0A072U1D6 | 83.007 | 153 | 16 | 1 | 118 | 260 | 3 | 155 | 1.12e-86 | 264 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1069700 | TF | NAC |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069700 | MtrunA17_Chr7g0251661 | 82.270 | 141 | 15 | 1 | 118 | 248 | 3 | 143 | 2.54e-81 | 241 |
| Msa1069700 | MtrunA17_Chr7g0251661 | 64.444 | 135 | 30 | 1 | 1 | 117 | 1 | 135 | 5.40e-55 | 174 |
| Msa1069700 | MtrunA17_Chr7g0251671 | 70.213 | 141 | 32 | 1 | 118 | 248 | 3 | 143 | 2.36e-65 | 201 |
| Msa1069700 | MtrunA17_Chr7g0251671 | 66.423 | 137 | 28 | 1 | 1 | 119 | 1 | 137 | 1.75e-57 | 181 |
| Msa1069700 | MtrunA17_Chr7g0251651 | 61.290 | 155 | 49 | 2 | 117 | 260 | 10 | 164 | 4.36e-60 | 188 |
| Msa1069700 | MtrunA17_Chr7g0251651 | 62.963 | 135 | 32 | 1 | 3 | 119 | 11 | 145 | 3.99e-51 | 166 |
| Msa1069700 | MtrunA17_Chr7g0214071 | 34.848 | 132 | 77 | 6 | 116 | 238 | 6 | 137 | 6.20e-16 | 75.1 |
| Msa1069700 | MtrunA17_Chr3g0124761 | 32.836 | 134 | 77 | 4 | 121 | 243 | 3 | 134 | 7.45e-16 | 75.5 |
| Msa1069700 | MtrunA17_Chr7g0253011 | 31.944 | 144 | 81 | 6 | 112 | 238 | 1 | 144 | 2.32e-15 | 75.1 |
| Msa1069700 | MtrunA17_Chr3g0139331 | 32.061 | 131 | 77 | 5 | 122 | 240 | 8 | 138 | 1.20e-14 | 72.8 |
| Msa1069700 | MtrunA17_Chr7g0252971 | 32.353 | 136 | 73 | 5 | 122 | 238 | 5 | 140 | 7.30e-14 | 70.5 |
| Msa1069700 | MtrunA17_Chr7g0252971 | 28.144 | 167 | 89 | 6 | 10 | 147 | 8 | 172 | 1.25e-12 | 66.6 |
| Msa1069700 | MtrunA17_Chr6g0453131 | 33.835 | 133 | 77 | 4 | 124 | 245 | 14 | 146 | 8.84e-14 | 70.5 |
| Msa1069700 | MtrunA17_Chr4g0042561 | 30.370 | 135 | 81 | 5 | 119 | 241 | 3 | 136 | 9.01e-14 | 69.3 |
| Msa1069700 | MtrunA17_Chr8g0384721 | 31.111 | 180 | 90 | 8 | 8 | 160 | 5 | 177 | 2.00e-13 | 68.6 |
| Msa1069700 | MtrunA17_Chr8g0384721 | 31.061 | 132 | 78 | 5 | 123 | 243 | 5 | 134 | 6.48e-13 | 67.0 |
| Msa1069700 | MtrunA17_Chr6g0461661 | 30.935 | 139 | 83 | 5 | 119 | 244 | 12 | 150 | 2.45e-13 | 68.9 |
| Msa1069700 | MtrunA17_Chr5g0417001 | 32.847 | 137 | 79 | 6 | 122 | 246 | 12 | 147 | 2.47e-13 | 68.9 |
| Msa1069700 | MtrunA17_Chr5g0433781 | 30.065 | 153 | 93 | 4 | 121 | 260 | 2 | 153 | 2.71e-13 | 69.3 |
| Msa1069700 | MtrunA17_Chr4g0047841 | 34.127 | 126 | 71 | 5 | 125 | 238 | 15 | 140 | 2.84e-13 | 68.6 |
| Msa1069700 | MtrunA17_Chr4g0047841 | 28.125 | 192 | 95 | 6 | 10 | 160 | 15 | 204 | 4.19e-13 | 68.2 |
| Msa1069700 | MtrunA17_Chr3g0109821 | 30.769 | 156 | 90 | 6 | 121 | 259 | 2 | 156 | 5.14e-13 | 68.6 |
| Msa1069700 | MtrunA17_Chr2g0318101 | 33.088 | 136 | 76 | 6 | 122 | 245 | 12 | 144 | 6.00e-13 | 67.8 |
| Msa1069700 | MtrunA17_Chr2g0318101 | 26.901 | 171 | 94 | 5 | 10 | 151 | 15 | 183 | 8.04e-12 | 64.3 |
| Msa1069700 | MtrunA17_Chr3g0144271 | 34.615 | 130 | 72 | 6 | 122 | 238 | 20 | 149 | 6.32e-13 | 67.8 |
| Msa1069700 | MtrunA17_Chr5g0417791 | 31.496 | 127 | 75 | 5 | 123 | 238 | 1 | 126 | 1.07e-12 | 66.2 |
| Msa1069700 | MtrunA17_Chr7g0217711 | 32.609 | 138 | 81 | 6 | 118 | 244 | 12 | 148 | 1.23e-12 | 64.7 |
| Msa1069700 | MtrunA17_Chr8g0385991 | 29.197 | 137 | 87 | 4 | 112 | 238 | 1 | 137 | 2.22e-12 | 64.7 |
| Msa1069700 | MtrunA17_Chr2g0311661 | 30.282 | 142 | 83 | 5 | 112 | 238 | 9 | 149 | 9.39e-12 | 63.9 |
| Msa1069700 | MtrunA17_Chr2g0311651 | 30.496 | 141 | 82 | 5 | 113 | 238 | 11 | 150 | 9.86e-12 | 63.9 |
| Msa1069700 | MtrunA17_Chr2g0316971 | 32.558 | 129 | 75 | 6 | 122 | 238 | 20 | 148 | 1.16e-11 | 63.9 |
| Msa1069700 | MtrunA17_Chr4g0017921 | 29.487 | 156 | 95 | 5 | 118 | 259 | 1 | 155 | 1.16e-11 | 63.9 |
| Msa1069700 | MtrunA17_Chr5g0442771 | 34.615 | 130 | 71 | 6 | 122 | 238 | 16 | 144 | 1.22e-11 | 63.5 |
| Msa1069700 | MtrunA17_Chr8g0361731 | 33.099 | 142 | 81 | 7 | 122 | 251 | 12 | 151 | 1.33e-11 | 63.9 |
| Msa1069700 | MtrunA17_Chr6g0481091 | 31.298 | 131 | 76 | 5 | 121 | 238 | 2 | 131 | 1.60e-11 | 62.8 |
| Msa1069700 | MtrunA17_Chr6g0453451 | 30.075 | 133 | 81 | 5 | 117 | 238 | 12 | 143 | 2.12e-11 | 63.2 |
| Msa1069700 | MtrunA17_Chr4g0060931 | 29.787 | 141 | 84 | 7 | 112 | 238 | 1 | 140 | 2.32e-11 | 63.2 |
| Msa1069700 | MtrunA17_Chr6g0484441 | 30.469 | 128 | 77 | 4 | 122 | 238 | 2 | 128 | 4.27e-11 | 62.0 |
| Msa1069700 | MtrunA17_Chr2g0326361 | 31.159 | 138 | 80 | 6 | 125 | 250 | 14 | 148 | 5.31e-11 | 62.0 |
| Msa1069700 | MtrunA17_Chr7g0263931 | 29.008 | 131 | 81 | 4 | 120 | 238 | 6 | 136 | 5.96e-11 | 61.6 |
| Msa1069700 | MtrunA17_Chr7g0263931 | 28.244 | 131 | 74 | 3 | 5 | 115 | 6 | 136 | 6.25e-11 | 61.6 |
| Msa1069700 | MtrunA17_Chr2g0309331 | 29.323 | 133 | 80 | 3 | 120 | 238 | 5 | 137 | 6.53e-11 | 61.6 |
| Msa1069700 | MtrunA17_Chr7g0217721 | 28.947 | 152 | 89 | 7 | 118 | 258 | 12 | 155 | 9.66e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069700 | AT5G13180.1 | 33.088 | 136 | 82 | 4 | 112 | 238 | 1 | 136 | 1.89e-17 | 79.7 |
| Msa1069700 | AT5G13180.1 | 32.061 | 131 | 70 | 4 | 3 | 115 | 7 | 136 | 6.13e-13 | 67.0 |
| Msa1069700 | AT5G18270.2 | 33.858 | 127 | 73 | 4 | 123 | 238 | 19 | 145 | 1.08e-15 | 75.9 |
| Msa1069700 | AT1G76420.1 | 36.434 | 129 | 70 | 6 | 122 | 238 | 19 | 147 | 1.69e-15 | 75.5 |
| Msa1069700 | AT5G18270.1 | 35.433 | 127 | 71 | 5 | 123 | 238 | 19 | 145 | 2.07e-15 | 75.1 |
| Msa1069700 | AT5G63790.1 | 32.374 | 139 | 81 | 5 | 116 | 243 | 41 | 177 | 5.18e-15 | 73.9 |
| Msa1069700 | AT5G63790.1 | 27.059 | 170 | 98 | 5 | 6 | 153 | 46 | 211 | 7.40e-12 | 64.7 |
| Msa1069700 | AT5G63790.2 | 32.374 | 139 | 81 | 5 | 116 | 243 | 51 | 187 | 5.40e-15 | 73.9 |
| Msa1069700 | AT5G63790.2 | 27.059 | 170 | 98 | 5 | 6 | 153 | 56 | 221 | 8.61e-12 | 64.7 |
| Msa1069700 | AT5G04410.1 | 30.201 | 149 | 90 | 4 | 125 | 260 | 9 | 156 | 1.69e-14 | 73.2 |
| Msa1069700 | AT3G04070.2 | 31.081 | 148 | 87 | 5 | 116 | 248 | 1 | 148 | 1.93e-14 | 72.4 |
| Msa1069700 | AT1G77450.1 | 31.206 | 141 | 84 | 5 | 119 | 248 | 4 | 142 | 1.97e-14 | 71.2 |
| Msa1069700 | AT1G77450.1 | 28.671 | 143 | 78 | 4 | 1 | 124 | 1 | 138 | 1.07e-11 | 63.5 |
| Msa1069700 | AT1G61110.1 | 33.333 | 132 | 74 | 5 | 125 | 245 | 16 | 144 | 2.31e-14 | 72.0 |
| Msa1069700 | AT1G61110.1 | 28.800 | 125 | 70 | 2 | 10 | 115 | 16 | 140 | 3.48e-11 | 62.8 |
| Msa1069700 | AT5G08790.1 | 32.090 | 134 | 78 | 5 | 121 | 243 | 3 | 134 | 2.44e-14 | 71.6 |
| Msa1069700 | AT3G04070.1 | 31.081 | 148 | 87 | 5 | 116 | 248 | 1 | 148 | 2.92e-14 | 72.0 |
| Msa1069700 | AT1G69490.1 | 31.469 | 143 | 83 | 6 | 119 | 250 | 3 | 141 | 1.42e-13 | 69.3 |
| Msa1069700 | AT3G15500.1 | 31.655 | 139 | 80 | 6 | 121 | 248 | 10 | 144 | 1.65e-13 | 69.7 |
| Msa1069700 | AT3G10500.1 | 32.283 | 127 | 72 | 4 | 125 | 238 | 9 | 134 | 3.71e-13 | 69.3 |
| Msa1069700 | AT2G43000.1 | 28.824 | 170 | 93 | 6 | 7 | 156 | 16 | 177 | 3.98e-13 | 68.2 |
| Msa1069700 | AT5G39820.1 | 31.915 | 141 | 83 | 6 | 122 | 250 | 18 | 157 | 6.38e-13 | 68.2 |
| Msa1069700 | AT5G53950.1 | 31.746 | 126 | 74 | 5 | 125 | 238 | 17 | 142 | 7.22e-13 | 68.2 |
| Msa1069700 | AT2G33480.1 | 32.520 | 123 | 72 | 5 | 125 | 238 | 15 | 135 | 9.28e-13 | 67.0 |
| Msa1069700 | AT2G33480.1 | 28.358 | 134 | 79 | 3 | 8 | 125 | 13 | 145 | 3.65e-12 | 65.1 |
| Msa1069700 | AT2G33480.2 | 32.520 | 123 | 72 | 5 | 125 | 238 | 15 | 135 | 9.74e-13 | 66.6 |
| Msa1069700 | AT2G33480.2 | 28.358 | 134 | 79 | 3 | 8 | 125 | 13 | 145 | 4.14e-12 | 65.1 |
| Msa1069700 | AT3G04060.1 | 32.283 | 127 | 75 | 5 | 123 | 238 | 18 | 144 | 1.08e-12 | 67.4 |
| Msa1069700 | AT1G65910.1 | 29.677 | 155 | 92 | 5 | 121 | 259 | 2 | 155 | 1.18e-12 | 67.8 |
| Msa1069700 | AT1G52890.1 | 31.655 | 139 | 80 | 6 | 121 | 248 | 10 | 144 | 1.20e-12 | 67.0 |
| Msa1069700 | AT1G01720.1 | 30.657 | 137 | 82 | 4 | 123 | 248 | 5 | 139 | 2.00e-12 | 66.2 |
| Msa1069700 | AT3G29035.1 | 32.031 | 128 | 75 | 6 | 122 | 238 | 21 | 147 | 2.33e-12 | 66.2 |
| Msa1069700 | AT1G54330.1 | 29.605 | 152 | 93 | 4 | 121 | 259 | 2 | 152 | 2.60e-12 | 65.9 |
| Msa1069700 | AT5G61430.1 | 32.031 | 128 | 75 | 6 | 122 | 238 | 13 | 139 | 2.77e-12 | 66.2 |
| Msa1069700 | AT5G17260.1 | 32.061 | 131 | 75 | 4 | 121 | 238 | 2 | 131 | 3.02e-12 | 66.6 |
| Msa1069700 | AT2G27300.1 | 35.200 | 125 | 68 | 5 | 128 | 240 | 17 | 140 | 3.21e-12 | 65.9 |
| Msa1069700 | AT5G39610.1 | 32.283 | 127 | 74 | 6 | 123 | 238 | 18 | 143 | 3.39e-12 | 65.5 |
| Msa1069700 | AT3G12910.1 | 31.507 | 146 | 85 | 5 | 123 | 254 | 20 | 164 | 3.73e-12 | 65.5 |
| Msa1069700 | AT3G17730.1 | 31.613 | 155 | 89 | 7 | 121 | 259 | 2 | 155 | 4.26e-12 | 64.7 |
| Msa1069700 | AT3G17730.1 | 30.345 | 145 | 80 | 4 | 6 | 130 | 2 | 145 | 3.62e-11 | 62.0 |
| Msa1069700 | AT4G27410.2 | 31.008 | 129 | 77 | 5 | 121 | 238 | 10 | 137 | 4.54e-12 | 65.1 |
| Msa1069700 | AT1G26870.1 | 33.333 | 129 | 73 | 6 | 122 | 238 | 14 | 141 | 4.88e-12 | 65.9 |
| Msa1069700 | AT5G07680.1 | 31.387 | 137 | 81 | 7 | 120 | 244 | 12 | 147 | 8.51e-12 | 64.7 |
| Msa1069700 | AT5G07680.2 | 32.090 | 134 | 78 | 7 | 123 | 244 | 1 | 133 | 1.64e-11 | 63.5 |
| Msa1069700 | AT3G10480.2 | 29.412 | 153 | 94 | 5 | 121 | 260 | 23 | 174 | 1.68e-11 | 64.3 |
| Msa1069700 | AT3G15170.1 | 31.783 | 129 | 76 | 6 | 122 | 238 | 17 | 145 | 1.84e-11 | 63.5 |
| Msa1069700 | AT3G15510.1 | 31.967 | 122 | 71 | 5 | 129 | 238 | 21 | 142 | 3.53e-11 | 63.2 |
| Msa1069700 | AT3G15510.1 | 27.848 | 158 | 89 | 4 | 14 | 146 | 21 | 178 | 3.77e-11 | 62.8 |
| Msa1069700 | AT4G17980.1 | 28.369 | 141 | 87 | 5 | 125 | 251 | 6 | 146 | 8.35e-11 | 61.2 |
Find 84 sgRNAs with CRISPR-Local
Find 395 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTGGTTGCCATCATTTCT+AGG | 0.227473 | 7_2:-65477361 | Msa1069700:three_prime_UTR |
| TTGATCTACCTGCTGGATTC+AGG | 0.237662 | 7_2:-65478524 | Msa1069700:CDS |
| AGATTTCTTGTTGTTTCTCT+TGG | 0.263544 | 7_2:-65477457 | Msa1069700:three_prime_UTR |
| GAAAGAACACATTTGTTTAC+TGG | 0.271032 | 7_2:-65484164 | Msa1069700:CDS |
| TGCAGAAAATAGATACTCTT+TGG | 0.273533 | 7_2:-65478095 | Msa1069700:intron |
| AGTACTATTTCTTTGATATC+AGG | 0.279804 | 7_2:-65484293 | Msa1069700:CDS |
| GAACCGTAGGTTCGAGAATA+TGG | 0.296257 | 7_2:-65478041 | Msa1069700:intron |
| CTTTCACACAATCTATTGAT+TGG | 0.327245 | 7_2:-65484189 | Msa1069700:CDS |
| TCAAATTCTGACATGACATT+TGG | 0.343033 | 7_2:+65478435 | None:intergenic |
| GAACCGTAGATTCGAGAATA+TGG | 0.360249 | 7_2:-65484271 | Msa1069700:CDS |
| ATTGTATTCCTTACCCTAGT+TGG | 0.360957 | 7_2:+65477839 | None:intergenic |
| GAAAGAACAGATATGTTTAC+TGG | 0.378161 | 7_2:-65477934 | Msa1069700:CDS |
| AATCAAATATTTAGCTTGGC+TGG | 0.392786 | 7_2:-65477378 | Msa1069700:three_prime_UTR |
| ATAGATACTCTTTGGAGAAT+AGG | 0.394512 | 7_2:-65478087 | Msa1069700:CDS |
| GATTTCTTGTTGTTTCTCTT+GGG | 0.409123 | 7_2:-65477456 | Msa1069700:three_prime_UTR |
| GAACTCATGTTTCATTTCCT+AGG | 0.413171 | 7_2:-65477560 | Msa1069700:three_prime_UTR |
| TTTCACACAATCTATTGATT+GGG | 0.415597 | 7_2:-65484188 | Msa1069700:CDS |
| GGAAATGAAACATGAGTTCA+TGG | 0.420430 | 7_2:+65477564 | None:intergenic |
| ACACATTTGTTTACTGGATA+GGG | 0.438722 | 7_2:-65484158 | Msa1069700:CDS |
| GGATCAAACTTGTATCCAAC+AGG | 0.462546 | 7_2:+65484818 | None:intergenic |
| AACTCATGTTTCATTTCCTA+GGG | 0.463617 | 7_2:-65477559 | Msa1069700:three_prime_UTR |
| AAGATCCGATAGGCAGCTAT+AGG | 0.467878 | 7_2:+65477668 | None:intergenic |
| GCTGAGCTTCTTCTACCTGT+TGG | 0.469612 | 7_2:-65484833 | Msa1069700:CDS |
| ATGATGAATCCTAGAAATGA+TGG | 0.475059 | 7_2:+65477352 | None:intergenic |
| ACAGATATGTTTACTGGATA+GGG | 0.475339 | 7_2:-65477928 | Msa1069700:CDS |
| TGAGTTCATGGAGAGGGAGG+AGG | 0.476558 | 7_2:+65477576 | None:intergenic |
| AACACATTTGTTTACTGGAT+AGG | 0.480417 | 7_2:-65484159 | Msa1069700:CDS |
| GTAGAATCAAATATTTAGCT+TGG | 0.487366 | 7_2:-65477382 | Msa1069700:three_prime_UTR |
| TCTGACATGACATTTGGAAA+AGG | 0.488494 | 7_2:+65478441 | None:intergenic |
| GTTAAGCTCTCCTTGCCAAA+TGG | 0.492048 | 7_2:+65477407 | None:intergenic |
| ACTGAGCCATGGAGGCTGCC+AGG | 0.492712 | 7_2:-65478402 | Msa1069700:CDS |
| GAAGAAGGCCACCACACTAA+TGG | 0.494390 | 7_2:-65477619 | Msa1069700:three_prime_UTR |
| GAAGAGCTGGAGATGGTGAA+TGG | 0.497231 | 7_2:-65484242 | Msa1069700:CDS |
| CATCCATATTCTCGAATCTA+CGG | 0.497709 | 7_2:+65484268 | None:intergenic |
| AACAGATATGTTTACTGGAT+AGG | 0.498598 | 7_2:-65477929 | Msa1069700:CDS |
| TCAACAAGTACGCGATCGGT+TGG | 0.506848 | 7_2:+65478495 | None:intergenic |
| AAACCTCCTGGCAGCCTCCA+TGG | 0.506870 | 7_2:+65478396 | None:intergenic |
| TCGAATTCAAACAAGTGAGT+TGG | 0.514689 | 7_2:+65484737 | None:intergenic |
| GAGTTCATGGAGAGGGAGGA+GGG | 0.516664 | 7_2:+65477577 | None:intergenic |
| ATCGGATCTTTAAGATATGA+AGG | 0.521757 | 7_2:-65477655 | Msa1069700:exon |
| AATATGGATGCAAGAAGAGC+TGG | 0.523452 | 7_2:-65484255 | Msa1069700:CDS |
| GCTGAGGTTGATCTACCTGC+TGG | 0.528162 | 7_2:-65478531 | Msa1069700:CDS |
| AATATGGATGCAAGAAGAGC+TGG | 0.531324 | 7_2:-65478025 | Msa1069700:CDS |
| CTTGTTGAGTACTACCTGAC+GGG | 0.535841 | 7_2:-65484782 | Msa1069700:CDS |
| AGTTCATGGAGAGGGAGGAG+GGG | 0.541559 | 7_2:+65477578 | None:intergenic |
| TTTGTTTACTGGATAGGGCA+AGG | 0.546149 | 7_2:-65484153 | Msa1069700:CDS |
| GTGAATGGAGAATAGTTGAA+TGG | 0.546179 | 7_2:-65484227 | Msa1069700:CDS |
| ATATATTTCAAACTGAGCCA+TGG | 0.550284 | 7_2:-65478413 | Msa1069700:CDS |
| TGCATCCTCCATTAGTGTGG+TGG | 0.554338 | 7_2:+65477611 | None:intergenic |
| TCAACAAGCTCGTGATCAGT+TGG | 0.555838 | 7_2:+65484797 | None:intergenic |
| TCAAACAAGTGAGTTGGAAG+AGG | 0.558737 | 7_2:+65484743 | None:intergenic |
| ACATGACATTTGGAAAAGGT+TGG | 0.561346 | 7_2:+65478445 | None:intergenic |
| TGAAACATGAGTTCATGGAG+AGG | 0.563520 | 7_2:+65477569 | None:intergenic |
| GAGAATAGTTGAATGGAATG+AGG | 0.563671 | 7_2:-65484220 | Msa1069700:CDS |
| GTAGAATTTCTGATCCAACT+AGG | 0.564430 | 7_2:-65477853 | Msa1069700:CDS |
| GATGCAAGAAGAGCTGGAAA+TGG | 0.566075 | 7_2:-65478019 | Msa1069700:CDS |
| ATCAAGCTCTGATGACAAGA+TGG | 0.571832 | 7_2:-65477898 | Msa1069700:CDS |
| GGTGGCAAAAGATGAGAAGA+AGG | 0.572725 | 7_2:-65477634 | Msa1069700:three_prime_UTR |
| GAAGAGCTGGAAATGGTGAA+TGG | 0.577138 | 7_2:-65478012 | Msa1069700:CDS |
| GGATCAAACCTGAATCCAGC+AGG | 0.578674 | 7_2:+65478516 | None:intergenic |
| TAGAATTTCTGATCCAACTA+GGG | 0.584601 | 7_2:-65477852 | Msa1069700:intron |
| GCGAATAGTTCAAAGGAATG+AGG | 0.587265 | 7_2:-65477990 | Msa1069700:CDS |
| ATAAAACTATTCTAAACCCT+AGG | 0.589855 | 7_2:+65477543 | None:intergenic |
| TATGTTTACTGGATAGGGCA+AGG | 0.598697 | 7_2:-65477923 | Msa1069700:CDS |
| GTGAATGGCGAATAGTTCAA+AGG | 0.604587 | 7_2:-65477997 | Msa1069700:CDS |
| GGTCACCTATAGCTGCCTAT+CGG | 0.611918 | 7_2:-65477673 | Msa1069700:CDS |
| ACATGAGTTCATGGAGAGGG+AGG | 0.614894 | 7_2:+65477573 | None:intergenic |
| GCTTGTTGAGTACTACCTGA+CGG | 0.620029 | 7_2:-65484783 | Msa1069700:CDS |
| GCACTCAACAAGTACGCGAT+CGG | 0.627245 | 7_2:+65478491 | None:intergenic |
| GAAACATGAGTTCATGGAGA+GGG | 0.632009 | 7_2:+65477570 | None:intergenic |
| GATGCAAGAAGAGCTGGAGA+TGG | 0.639988 | 7_2:-65484249 | Msa1069700:CDS |
| ACAAGTGAGTTGGAAGAGGT+AGG | 0.647632 | 7_2:+65484747 | None:intergenic |
| GAAGGCCACCACACTAATGG+AGG | 0.652157 | 7_2:-65477616 | Msa1069700:three_prime_UTR |
| TCATATCTTAAAGATCCGAT+AGG | 0.653307 | 7_2:+65477658 | None:intergenic |
| ATCAAGCTCTGATGACACAA+TGG | 0.656016 | 7_2:-65484128 | Msa1069700:CDS |
| AAGCTCTGATGACAAGATGG+TGG | 0.668891 | 7_2:-65477895 | Msa1069700:CDS |
| TTGTTGAGTACTACCTGACG+GGG | 0.672691 | 7_2:-65484781 | Msa1069700:CDS |
| AAGCTCTGATGACACAATGG+TGG | 0.675163 | 7_2:-65484125 | Msa1069700:CDS |
| TATTTCAAACTGAGCCATGG+AGG | 0.675314 | 7_2:-65478410 | Msa1069700:CDS |
| ACTTGCATCCTCCATTAGTG+TGG | 0.678198 | 7_2:+65477608 | None:intergenic |
| GAGCCATGGAGGCTGCCAGG+AGG | 0.693460 | 7_2:-65478399 | Msa1069700:intron |
| CATGGCGGTAGCTAATGCTG+AGG | 0.695855 | 7_2:-65478547 | Msa1069700:intron |
| TGGATGCATGAATTTGTCAT+CGG | 0.708626 | 7_2:-65477875 | Msa1069700:CDS |
| GGATCTTTAAGATATGAAGG+TGG | 0.724453 | 7_2:-65477652 | Msa1069700:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACTACATATATTATTAAAT+TGG | + | chr7_2:65478660-65478679 | None:intergenic | 10.0% |
| !!! | TGTTTAAATTTTAAATACTA+GGG | + | chr7_2:65478805-65478824 | None:intergenic | 10.0% |
| !!! | CTATTTAAATTTTAAATAGT+AGG | + | chr7_2:65479100-65479119 | None:intergenic | 10.0% |
| !!! | ATATTTTTATTTGATTTCTT+AGG | + | chr7_2:65479165-65479184 | None:intergenic | 10.0% |
| !! | TACTACATATATTATTAAAT+TGG | + | chr7_2:65478660-65478679 | None:intergenic | 10.0% |
| !! | TACAAAAAGTAAAATATATT+TGG | + | chr7_2:65479365-65479384 | None:intergenic | 10.0% |
| !! | AATCTTATCATTATTTAATA+GGG | + | chr7_2:65479415-65479434 | None:intergenic | 10.0% |
| !! | AAATCTTATCATTATTTAAT+AGG | + | chr7_2:65479416-65479435 | None:intergenic | 10.0% |
| !!! | AAATAATGATAAGATTTTTA+AGG | - | chr7_2:65479419-65479438 | Msa1069700:intron | 10.0% |
| !! | GAATAGATTAAAAAAAAATT+CGG | - | chr7_2:65479725-65479744 | Msa1069700:intron | 10.0% |
| !!! | TTATCTCTTATTTTTTAATA+TGG | + | chr7_2:65481716-65481735 | None:intergenic | 10.0% |
| !! | GTTTAATACATAAATAAATA+AGG | + | chr7_2:65482732-65482751 | None:intergenic | 10.0% |
| !!! | TATTTATCTTATTTTAATGA+TGG | + | chr7_2:65482886-65482905 | None:intergenic | 10.0% |
| !! | AATCATTTAAGAATAATATT+TGG | - | chr7_2:65482916-65482935 | Msa1069700:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTTGAAG+AGG | + | chr7_2:65483585-65483604 | None:intergenic | 10.0% |
| !!! | ACAATTTGATTTATTCATTT+TGG | - | chr7_2:65477789-65477808 | Msa1069700:intron | 15.0% |
| !!! | CAATTTGATTTATTCATTTT+GGG | - | chr7_2:65477790-65477809 | Msa1069700:intron | 15.0% |
| !!! | TTTTTTTAAGTAATGTGTTT+TGG | - | chr7_2:65478163-65478182 | Msa1069700:intron | 15.0% |
| !!! | TATCTTGTTTATTTATAATC+AGG | - | chr7_2:65478244-65478263 | Msa1069700:intron | 15.0% |
| !! | TAAATTCTTTAAACTAAAGA+TGG | + | chr7_2:65478437-65478456 | None:intergenic | 15.0% |
| !! | ACACAAAAATAAAATGTATT+TGG | + | chr7_2:65478756-65478775 | None:intergenic | 15.0% |
| !!! | CTGTTTAAATTTTAAATACT+AGG | + | chr7_2:65478806-65478825 | None:intergenic | 15.0% |
| !!! | ATATTTGTATTTGATTTCTT+AGG | + | chr7_2:65478871-65478890 | None:intergenic | 15.0% |
| !! | TGCTACATATATTATTAAAT+TGG | + | chr7_2:65478923-65478942 | None:intergenic | 15.0% |
| !!! | AGTAAAATGTTTTTTTTTTG+AGG | + | chr7_2:65479042-65479061 | None:intergenic | 15.0% |
| !!! | AAAATATATTTGGTCTTTTT+AGG | + | chr7_2:65479355-65479374 | None:intergenic | 15.0% |
| !! | TTATAAAAGAATTTCATACA+TGG | + | chr7_2:65480042-65480061 | None:intergenic | 15.0% |
| !!! | TATGAAATTCTTTTATAAGA+GGG | - | chr7_2:65480044-65480063 | Msa1069700:intron | 15.0% |
| !!! | GAATTTAATTTGTAAATATG+TGG | - | chr7_2:65480802-65480821 | Msa1069700:intron | 15.0% |
| !! | AAAAATTAAAGCTATTCAAT+TGG | - | chr7_2:65481333-65481352 | Msa1069700:intron | 15.0% |
| !! | AAAATTAAAGCTATTCAATT+GGG | - | chr7_2:65481334-65481353 | Msa1069700:intron | 15.0% |
| !! | ACACTAAATTAAAATGTATT+TGG | + | chr7_2:65481929-65481948 | None:intergenic | 15.0% |
| !! | TTATCTCTCATTATTTAATA+CGG | + | chr7_2:65481978-65481997 | None:intergenic | 15.0% |
| !!! | AATATGTATTGGTATTTTAA+AGG | + | chr7_2:65482687-65482706 | None:intergenic | 15.0% |
| !! | AACATACAATAAATATGTAT+TGG | + | chr7_2:65482698-65482717 | None:intergenic | 15.0% |
| !!! | TTTGGCAAAATTATAATTTT+TGG | - | chr7_2:65482934-65482953 | Msa1069700:intron | 15.0% |
| !! | AAATGAAAACAATTGATAAA+TGG | + | chr7_2:65483365-65483384 | None:intergenic | 15.0% |
| !! | ATTTACAACAATAAAGAAAA+TGG | + | chr7_2:65483413-65483432 | None:intergenic | 15.0% |
| !!! | ACAAATTGATTTATTCATTT+TGG | - | chr7_2:65484021-65484040 | Msa1069700:intron | 15.0% |
| !!! | CAAATTGATTTATTCATTTT+GGG | - | chr7_2:65484022-65484041 | Msa1069700:intron | 15.0% |
| !! | CCATCAAAAGATTAATTAAA+TGG | + | chr7_2:65477640-65477659 | None:intergenic | 20.0% |
| !!! | CCATTTAATTAATCTTTTGA+TGG | - | chr7_2:65477637-65477656 | Msa1069700:three_prime_UTR | 20.0% |
| !! | ACATCATATAAACATTTCAT+GGG | + | chr7_2:65477750-65477769 | None:intergenic | 20.0% |
| !! | AACATCATATAAACATTTCA+TGG | + | chr7_2:65477751-65477770 | None:intergenic | 20.0% |
| !!! | TTTATATGATGTTTTCATGT+GGG | - | chr7_2:65477758-65477777 | Msa1069700:intron | 20.0% |
| !!! | TTTTTTTTTTTGCAGATGAT+AGG | - | chr7_2:65477833-65477852 | Msa1069700:intron | 20.0% |
| !! | GAATTTATTTGTAAGTCTTA+TGG | - | chr7_2:65478450-65478469 | Msa1069700:CDS | 20.0% |
| !!! | ATATTTGTGTTTGATTTCAT+AGG | + | chr7_2:65478607-65478626 | None:intergenic | 20.0% |
| !!! | AAATGATTTTGGTCTAATTT+AGG | + | chr7_2:65479005-65479024 | None:intergenic | 20.0% |
| !!! | CACAAAAAGTAAAATGATTT+TGG | + | chr7_2:65479016-65479035 | None:intergenic | 20.0% |
| !! | ATGATAACCTTTATTCAAAT+TGG | - | chr7_2:65479932-65479951 | Msa1069700:intron | 20.0% |
| !!! | GTATGAAATTCTTTTATAAG+AGG | - | chr7_2:65480043-65480062 | Msa1069700:intron | 20.0% |
| !!! | ATTCTCGTTTTATGTAAAAT+TGG | - | chr7_2:65480132-65480151 | Msa1069700:intron | 20.0% |
| !! | GATTGATATATCGTTATATA+CGG | + | chr7_2:65480411-65480430 | None:intergenic | 20.0% |
| !! | TTTAAATAAAAAGGGGAAAT+AGG | + | chr7_2:65480451-65480470 | None:intergenic | 20.0% |
| !! | TGCTGGAATTTAAATAAAAA+GGG | + | chr7_2:65480459-65480478 | None:intergenic | 20.0% |
| !! | TTGCTGGAATTTAAATAAAA+AGG | + | chr7_2:65480460-65480479 | None:intergenic | 20.0% |
| !! | TGATTAAATTTAAACTTCGA+AGG | + | chr7_2:65480739-65480758 | None:intergenic | 20.0% |
| !! | CAATGAAATAATGAGATTTA+GGG | + | chr7_2:65481023-65481042 | None:intergenic | 20.0% |
| !! | TCAATGAAATAATGAGATTT+AGG | + | chr7_2:65481024-65481043 | None:intergenic | 20.0% |
| !! | AGAATAACATAATACAACAT+TGG | - | chr7_2:65481307-65481326 | Msa1069700:intron | 20.0% |
| !! | AAATGAATTTGATCTGAATT+CGG | - | chr7_2:65481384-65481403 | Msa1069700:intron | 20.0% |
| !! | CTTATCTCTCATATTTAATA+CGG | + | chr7_2:65481460-65481479 | None:intergenic | 20.0% |
| !!! | TCTGTATTTATTTTATTGAC+TGG | - | chr7_2:65481748-65481767 | Msa1069700:intron | 20.0% |
| !! | AATCATGCATGAATAAAATT+TGG | + | chr7_2:65481841-65481860 | None:intergenic | 20.0% |
| !!! | TTAATTTAGTGTTACTCATA+TGG | - | chr7_2:65481937-65481956 | Msa1069700:intron | 20.0% |
| !! | CATTATTTAATACAGAGTAA+AGG | + | chr7_2:65481970-65481989 | None:intergenic | 20.0% |
| !! | AAATGTATTTGATCTGAATT+CGG | - | chr7_2:65481902-65481921 | Msa1069700:intron | 20.0% |
| !! | ACACTAAAGTAAAATGTATT+TGG | + | chr7_2:65482188-65482207 | None:intergenic | 20.0% |
| !! | ATTAAAAAAAATTGGTTGGA+AGG | + | chr7_2:65482594-65482613 | None:intergenic | 20.0% |
| !! | GTACATTAAAAAAAATTGGT+TGG | + | chr7_2:65482598-65482617 | None:intergenic | 20.0% |
| !! | ACTCGTACATTAAAAAAAAT+TGG | + | chr7_2:65482602-65482621 | None:intergenic | 20.0% |
| !! | TAAATAAATAAGGGTAACAT+TGG | + | chr7_2:65482722-65482741 | None:intergenic | 20.0% |
| !!! | TTTATTTTTTTTGCACTTAG+TGG | + | chr7_2:65482759-65482778 | None:intergenic | 20.0% |
| !! | CTGAAATGAAAAAAAGATAA+AGG | + | chr7_2:65482972-65482991 | None:intergenic | 20.0% |
| !! | CATTTCAATCTTCAAATTTA+TGG | - | chr7_2:65483060-65483079 | Msa1069700:intron | 20.0% |
| !! | CTTGAAAATTCATATGAAAA+TGG | - | chr7_2:65483121-65483140 | Msa1069700:intron | 20.0% |
| !!! | TTATTTCAATTTTGTCCTTT+TGG | + | chr7_2:65483148-65483167 | None:intergenic | 20.0% |
| !! | ACAATAAAGAAAATGGTATT+AGG | + | chr7_2:65483406-65483425 | None:intergenic | 20.0% |
| !! | TCATAAAGAAAGAGAATAAA+GGG | + | chr7_2:65483838-65483857 | None:intergenic | 20.0% |
| !! | TTTATTGATAAAACACACAA+TGG | + | chr7_2:65483861-65483880 | None:intergenic | 20.0% |
| !!! | CTTATATGATGTTTTTATGT+GGG | - | chr7_2:65483990-65484009 | Msa1069700:intron | 20.0% |
| !!! | AAAAATTTTGATAGTGATAG+TGG | + | chr7_2:65484360-65484379 | None:intergenic | 20.0% |
| !!! | TATCACTATCAAAATTTTTG+AGG | - | chr7_2:65484361-65484380 | Msa1069700:intron | 20.0% |
| !! | TTTGAACTCAAATTAAATGT+AGG | - | chr7_2:65484472-65484491 | Msa1069700:intron | 20.0% |
| !! | TTGAACTCAAATTAAATGTA+GGG | - | chr7_2:65484473-65484492 | Msa1069700:intron | 20.0% |
| !!! | TTGTGTAAGTTATTTTCTTT+TGG | - | chr7_2:65484683-65484702 | Msa1069700:intron | 20.0% |
| ! | TTTCTATTGATAAGACACAA+TGG | + | chr7_2:65477564-65477583 | None:intergenic | 25.0% |
| !! | GTTTATATGATGTTTTCATG+TGG | - | chr7_2:65477757-65477776 | Msa1069700:intron | 25.0% |
| !! | AGTACTATTTCTTTGATATC+AGG | - | chr7_2:65477875-65477894 | Msa1069700:CDS | 25.0% |
| !! | TTTCACACAATCTATTGATT+GGG | - | chr7_2:65477980-65477999 | Msa1069700:CDS | 25.0% |
| !!! | AAGTTTTTTGATAGTGATAG+TGG | + | chr7_2:65478133-65478152 | None:intergenic | 25.0% |
| !! | TCACTATCAAAAAACTTTTG+AGG | - | chr7_2:65478136-65478155 | Msa1069700:intron | 25.0% |
| !!! | TGCTAGTTTTTATGTAAACT+TGG | - | chr7_2:65478213-65478232 | Msa1069700:intron | 25.0% |
| !! | TTTTGAACTCAAATCAATGT+AGG | - | chr7_2:65478287-65478306 | Msa1069700:intron | 25.0% |
| ! | ATCATAAGTTTCATTTGCTT+GGG | - | chr7_2:65478390-65478409 | Msa1069700:intron | 25.0% |
| ! | CTTTAATCTGTGTAGTATAT+AGG | - | chr7_2:65478484-65478503 | Msa1069700:CDS | 25.0% |
| !! | TTTTAAATACTAGGGCATAA+AGG | + | chr7_2:65478797-65478816 | None:intergenic | 25.0% |
| !! | CTGTATAAGATATTTCCTTT+TGG | - | chr7_2:65479531-65479550 | Msa1069700:intron | 25.0% |
| !!! | ATATTTTAGTCCATTTGGTA+AGG | - | chr7_2:65479599-65479618 | Msa1069700:intron | 25.0% |
| ! | AGATATTTAGGTATCACATT+GGG | - | chr7_2:65479779-65479798 | Msa1069700:intron | 25.0% |
| ! | TAGGAATAAGAATATCACAT+CGG | - | chr7_2:65479819-65479838 | Msa1069700:intron | 25.0% |
| !!! | AACTATGGTCTTTTTTGTAT+CGG | + | chr7_2:65479856-65479875 | None:intergenic | 25.0% |
| ! | ATACAAAAAAGACCATAGTT+AGG | - | chr7_2:65479856-65479875 | Msa1069700:intron | 25.0% |
| ! | AGAGCAAAATGACATTAAAA+AGG | + | chr7_2:65479893-65479912 | None:intergenic | 25.0% |
| ! | TGCTTAACCAATTTGAATAA+AGG | + | chr7_2:65479942-65479961 | None:intergenic | 25.0% |
| !! | ATCCTTTTATGACAAACATT+TGG | - | chr7_2:65480155-65480174 | Msa1069700:intron | 25.0% |
| ! | TACATTATTTCAAATGGTCT+CGG | - | chr7_2:65480233-65480252 | Msa1069700:intron | 25.0% |
| !!! | GGATTGGTTTTTATTTAACT+GGG | + | chr7_2:65480360-65480379 | None:intergenic | 25.0% |
| !!! | TGGATTGGTTTTTATTTAAC+TGG | + | chr7_2:65480361-65480380 | None:intergenic | 25.0% |
| ! | AAATAAAAACCAATCCACTT+TGG | - | chr7_2:65480364-65480383 | Msa1069700:intron | 25.0% |
| ! | GCTGGAATTTAAATAAAAAG+GGG | + | chr7_2:65480458-65480477 | None:intergenic | 25.0% |
| ! | CAAATAAAAAAACTACTTGC+TGG | + | chr7_2:65480476-65480495 | None:intergenic | 25.0% |
| ! | CTTACATATATGTATAGTGT+TGG | + | chr7_2:65480631-65480650 | None:intergenic | 25.0% |
| ! | TTATCTAACGAAAAGTTACT+AGG | - | chr7_2:65480768-65480787 | Msa1069700:intron | 25.0% |
| ! | ATCAATATGTGATCGATATA+TGG | + | chr7_2:65480839-65480858 | None:intergenic | 25.0% |
| ! | AATAAAATGACATTTACAGC+TGG | - | chr7_2:65480917-65480936 | Msa1069700:intron | 25.0% |
| ! | TCTTAAAACTGATCAGATAA+TGG | - | chr7_2:65480996-65481015 | Msa1069700:intron | 25.0% |
| ! | ATGATATATCCTACAAATGA+GGG | - | chr7_2:65481074-65481093 | Msa1069700:intron | 25.0% |
| ! | ATGATATATCCTACAAATGA+GGG | - | chr7_2:65481074-65481093 | Msa1069700:intron | 25.0% |
| !!! | TGATCTATTTGATTTGTTGA+TGG | + | chr7_2:65481194-65481213 | None:intergenic | 25.0% |
| !! | AACTTTATTTGACCTGAATT+CGG | - | chr7_2:65481640-65481659 | Msa1069700:intron | 25.0% |
| ! | ATTACCATATTATTCAGTGT+CGG | - | chr7_2:65481771-65481790 | Msa1069700:intron | 25.0% |
| ! | ATGAATAAAATTTGGTTGGA+AGG | + | chr7_2:65481833-65481852 | None:intergenic | 25.0% |
| ! | ATGCATGAATAAAATTTGGT+TGG | + | chr7_2:65481837-65481856 | None:intergenic | 25.0% |
| ! | TTTATTCATGCATGATTGTA+AGG | - | chr7_2:65481844-65481863 | Msa1069700:intron | 25.0% |
| ! | ATGAATAAAATTTGGTTGGA+AGG | + | chr7_2:65481833-65481852 | None:intergenic | 25.0% |
| ! | TATGTTTGATTCCTTACAAT+CGG | + | chr7_2:65482374-65482393 | None:intergenic | 25.0% |
| ! | ATTCAGATCAAATATCCTTA+AGG | + | chr7_2:65482407-65482426 | None:intergenic | 25.0% |
| ! | AAGGATATTTGATCTGAATT+CGG | - | chr7_2:65482408-65482427 | Msa1069700:intron | 25.0% |
| ! | CATTATTTAATACGACGTAA+AGG | + | chr7_2:65482476-65482495 | None:intergenic | 25.0% |
| ! | GACTGAATTACCATATTATT+CGG | - | chr7_2:65482532-65482551 | Msa1069700:intron | 25.0% |
| !! | AACTTTTTGATCTATGCAAT+TGG | + | chr7_2:65482811-65482830 | None:intergenic | 25.0% |
| !!! | TCATTTCAGTTTTGTTCTTT+TGG | - | chr7_2:65482983-65483002 | Msa1069700:intron | 25.0% |
| ! | CTTGAAAATTCTTATGCAAA+TGG | + | chr7_2:65483010-65483029 | None:intergenic | 25.0% |
| ! | GAAAACAATTGATAAATGGT+AGG | + | chr7_2:65483361-65483380 | None:intergenic | 25.0% |
| !! | AAGCATTGTCTTGAATTTAT+AGG | + | chr7_2:65483507-65483526 | None:intergenic | 25.0% |
| ! | GTCATAAAGAAAGAGAATAA+AGG | + | chr7_2:65483839-65483858 | None:intergenic | 25.0% |
| !! | ATTTTCTTAGTGTTCTTTGA+TGG | - | chr7_2:65483887-65483906 | Msa1069700:intron | 25.0% |
| ! | AACATCATATAAGCATTTCA+TGG | + | chr7_2:65483983-65484002 | None:intergenic | 25.0% |
| !!! | GCTTATATGATGTTTTTATG+TGG | - | chr7_2:65483989-65484008 | Msa1069700:intron | 25.0% |
| ! | TGAACTCAAATTAAATGTAG+GGG | - | chr7_2:65484474-65484493 | Msa1069700:intron | 25.0% |
| ! | ATAAAACTATTCTAAACCCT+AGG | + | chr7_2:65484628-65484647 | None:intergenic | 25.0% |
| ! | GTAGAATCAAATATTTAGCT+TGG | - | chr7_2:65484786-65484805 | Msa1069700:CDS | 25.0% |
| CTTTCACACAATCTATTGAT+TGG | - | chr7_2:65477979-65477998 | Msa1069700:CDS | 30.0% | |
| GAAAGAACACATTTGTTTAC+TGG | - | chr7_2:65478004-65478023 | Msa1069700:CDS | 30.0% | |
| AACACATTTGTTTACTGGAT+AGG | - | chr7_2:65478009-65478028 | Msa1069700:CDS | 30.0% | |
| ACACATTTGTTTACTGGATA+GGG | - | chr7_2:65478010-65478029 | Msa1069700:CDS | 30.0% | |
| !! | AGTAATGTGTTTTGGACTTA+TGG | - | chr7_2:65478171-65478190 | Msa1069700:intron | 30.0% |
| TCATACCTTAAATATCCGAT+AGG | + | chr7_2:65478328-65478347 | None:intergenic | 30.0% | |
| ! | ATCGGATATTTAAGGTATGA+AGG | - | chr7_2:65478328-65478347 | Msa1069700:intron | 30.0% |
| CAAATGAAACTTATGATCCA+TGG | + | chr7_2:65478387-65478406 | None:intergenic | 30.0% | |
| GATCATAAGTTTCATTTGCT+TGG | - | chr7_2:65478389-65478408 | Msa1069700:intron | 30.0% | |
| TGTGTTAGTCAACTAAAGTT+TGG | - | chr7_2:65479065-65479084 | Msa1069700:intron | 30.0% | |
| CACCTTTATACCCAATTTAA+TGG | - | chr7_2:65479448-65479467 | Msa1069700:intron | 30.0% | |
| TGCCATTAAATTGGGTATAA+AGG | + | chr7_2:65479453-65479472 | None:intergenic | 30.0% | |
| ! | GTTTCTTGTGCCATTAAATT+GGG | + | chr7_2:65479461-65479480 | None:intergenic | 30.0% |
| ! | TGTTTCTTGTGCCATTAAAT+TGG | + | chr7_2:65479462-65479481 | None:intergenic | 30.0% |
| !! | AGATTGCTTGTTATTTCTCT+TGG | - | chr7_2:65479559-65479578 | Msa1069700:intron | 30.0% |
| !! | GATTGCTTGTTATTTCTCTT+GGG | - | chr7_2:65479560-65479579 | Msa1069700:intron | 30.0% |
| !!! | GCATGATATTTTAGTCCATT+TGG | - | chr7_2:65479594-65479613 | Msa1069700:intron | 30.0% |
| TTAAGCTAATCCTTACCAAA+TGG | + | chr7_2:65479612-65479631 | None:intergenic | 30.0% | |
| CTAGAATCAGATAATTAGCT+TGG | - | chr7_2:65479635-65479654 | Msa1069700:intron | 30.0% | |
| AAAGCCAATGTGAGATATTT+AGG | - | chr7_2:65479767-65479786 | Msa1069700:intron | 30.0% | |
| GATACCTAAATATCTCACAT+TGG | + | chr7_2:65479774-65479793 | None:intergenic | 30.0% | |
| GAGATATTTAGGTATCACAT+TGG | - | chr7_2:65479778-65479797 | Msa1069700:intron | 30.0% | |
| GATATTTAGGTATCACATTG+GGG | - | chr7_2:65479780-65479799 | Msa1069700:intron | 30.0% | |
| ATATTTAGGTATCACATTGG+GGG | - | chr7_2:65479781-65479800 | Msa1069700:intron | 30.0% | |
| !! | TAGATATGCTTTTTAACTGG+TGG | + | chr7_2:65479976-65479995 | None:intergenic | 30.0% |
| !! | GTGTAGATATGCTTTTTAAC+TGG | + | chr7_2:65479979-65479998 | None:intergenic | 30.0% |
| ATATAAGCAAAGTAGCATGT+CGG | - | chr7_2:65480099-65480118 | Msa1069700:intron | 30.0% | |
| AGCCAAATGTTTGTCATAAA+AGG | + | chr7_2:65480160-65480179 | None:intergenic | 30.0% | |
| GTGTGCTACATTATTTCAAA+TGG | - | chr7_2:65480227-65480246 | Msa1069700:intron | 30.0% | |
| !!! | AAGATAGTTGTTTTGGTTGA+TGG | - | chr7_2:65480258-65480277 | Msa1069700:intron | 30.0% |
| TGATATATCGTTATATACGG+TGG | + | chr7_2:65480408-65480427 | None:intergenic | 30.0% | |
| ! | CAGAATAGACACATTCTTTT+TGG | - | chr7_2:65480957-65480976 | Msa1069700:intron | 30.0% |
| ! | AGACACATTCTTTTTGGATA+TGG | - | chr7_2:65480963-65480982 | Msa1069700:intron | 30.0% |
| GATGATATATCCTACAAATG+AGG | - | chr7_2:65481073-65481092 | Msa1069700:intron | 30.0% | |
| GATGATATATCCTACAAATG+AGG | - | chr7_2:65481073-65481092 | Msa1069700:intron | 30.0% | |
| TCATATTTAATACGGCGTAA+TGG | + | chr7_2:65481452-65481471 | None:intergenic | 30.0% | |
| GTCTGTATTTCTTTATTGAC+TGG | - | chr7_2:65481490-65481509 | Msa1069700:intron | 30.0% | |
| GACTGGATTACCATATTATT+CGG | - | chr7_2:65481507-65481526 | Msa1069700:intron | 30.0% | |
| !! | ATTACCATATTATTCGGTGT+CGG | - | chr7_2:65481513-65481532 | Msa1069700:intron | 30.0% |
| ATGAATAAAGTTTGGTTGGA+AGG | + | chr7_2:65481570-65481589 | None:intergenic | 30.0% | |
| TTTATTCATGCACGAGTATA+AGG | - | chr7_2:65481581-65481600 | Msa1069700:intron | 30.0% | |
| TGACTAACTCATTATGAAAG+TGG | + | chr7_2:65481621-65481640 | None:intergenic | 30.0% | |
| AACATATGTCCACTTTCTTA+AGG | - | chr7_2:65481871-65481890 | Msa1069700:intron | 30.0% | |
| ATCCAGTCAATAGACAAATA+CGG | + | chr7_2:65482014-65482033 | None:intergenic | 30.0% | |
| CTCACTAAGATCGAATAATA+CGG | + | chr7_2:65482039-65482058 | None:intergenic | 30.0% | |
| GTGCATGAATAAAATTTGGT+TGG | + | chr7_2:65482095-65482114 | None:intergenic | 30.0% | |
| ACTCGTGCATGAATAAAATT+TGG | + | chr7_2:65482099-65482118 | None:intergenic | 30.0% | |
| AACATATGTCCACTTTCTTA+AGG | - | chr7_2:65481871-65481890 | Msa1069700:intron | 30.0% | |
| CATTATTTAATACGGCGTAA+AGG | + | chr7_2:65482229-65482248 | None:intergenic | 30.0% | |
| !! | GTCTGTATTGTTTTATTGAC+TGG | - | chr7_2:65482268-65482287 | Msa1069700:intron | 30.0% |
| GACTGGATTACCATATTATT+CGG | - | chr7_2:65481507-65481526 | Msa1069700:intron | 30.0% | |
| !! | ATTACCATATTATTCGGTGT+TGG | - | chr7_2:65481513-65481532 | Msa1069700:intron | 30.0% |
| AATCGGGCATGAATAAAATT+TGG | + | chr7_2:65482357-65482376 | None:intergenic | 30.0% | |
| ATGTTTGATTCCTTACAATC+GGG | + | chr7_2:65482373-65482392 | None:intergenic | 30.0% | |
| !! | ACATATATCGACTTTCCTTA+AGG | - | chr7_2:65482389-65482408 | Msa1069700:intron | 30.0% |
| !! | ATTACCATATTATTCGGTGT+CGG | - | chr7_2:65481513-65481532 | Msa1069700:intron | 30.0% |
| TAAGAGACATGAACTCTTTA+AGG | + | chr7_2:65482653-65482672 | None:intergenic | 30.0% | |
| !! | ATTTTCAAGCTTCAAGTTCA+TGG | - | chr7_2:65483021-65483040 | Msa1069700:intron | 30.0% |
| TCATATGAAAATGGACCAAA+AGG | - | chr7_2:65483130-65483149 | Msa1069700:intron | 30.0% | |
| TTGAATTTATAGGTGTAAGG+AGG | + | chr7_2:65483497-65483516 | None:intergenic | 30.0% | |
| GTCTTGAATTTATAGGTGTA+AGG | + | chr7_2:65483500-65483519 | None:intergenic | 30.0% | |
| !!! | AAAACTTTTGGTGTCAATCA+TGG | - | chr7_2:65483603-65483622 | Msa1069700:intron | 30.0% |
| TCAAATTCTGACATGACATT+TGG | + | chr7_2:65483736-65483755 | None:intergenic | 30.0% | |
| ATATATTTCAAACTGAGCCA+TGG | - | chr7_2:65483755-65483774 | Msa1069700:intron | 30.0% | |
| TGCAGAAAATAGATACTCTT+TGG | - | chr7_2:65484073-65484092 | Msa1069700:intron | 30.0% | |
| ! | ATAGATACTCTTTGGAGAAT+AGG | - | chr7_2:65484081-65484100 | Msa1069700:intron | 30.0% |
| ! | AGTACTATTTCTTTGATCTC+AGG | - | chr7_2:65484105-65484124 | Msa1069700:CDS | 30.0% |
| GAAAGAACAGATATGTTTAC+TGG | - | chr7_2:65484234-65484253 | Msa1069700:CDS | 30.0% | |
| AACAGATATGTTTACTGGAT+AGG | - | chr7_2:65484239-65484258 | Msa1069700:CDS | 30.0% | |
| ACAGATATGTTTACTGGATA+GGG | - | chr7_2:65484240-65484259 | Msa1069700:CDS | 30.0% | |
| TAGAATTTCTGATCCAACTA+GGG | - | chr7_2:65484316-65484335 | Msa1069700:CDS | 30.0% | |
| TCATATCTTAAAGATCCGAT+AGG | + | chr7_2:65484513-65484532 | None:intergenic | 30.0% | |
| !! | ATCGGATCTTTAAGATATGA+AGG | - | chr7_2:65484513-65484532 | Msa1069700:intron | 30.0% |
| AACTCATGTTTCATTTCCTA+GGG | - | chr7_2:65484609-65484628 | Msa1069700:intron | 30.0% | |
| !! | AGATTTCTTGTTGTTTCTCT+TGG | - | chr7_2:65484711-65484730 | Msa1069700:intron | 30.0% |
| !! | GATTTCTTGTTGTTTCTCTT+GGG | - | chr7_2:65484712-65484731 | Msa1069700:intron | 30.0% |
| !! | AATCAAATATTTAGCTTGGC+TGG | - | chr7_2:65484790-65484809 | Msa1069700:CDS | 30.0% |
| ATGATGAATCCTAGAAATGA+TGG | + | chr7_2:65479668-65479687 | None:intergenic | 30.0% | |
| TCGAATTCAAACAAGTGAGT+TGG | + | chr7_2:65477434-65477453 | None:intergenic | 35.0% | |
| CTGAAATTTCACAAACCTCT+TGG | + | chr7_2:65477485-65477504 | None:intergenic | 35.0% | |
| ! | TGCAGATGATAGGTTTTCTT+TGG | - | chr7_2:65477843-65477862 | Msa1069700:intron | 35.0% |
| !!! | ATAGGTTTTCTTTGGAGCAT+AGG | - | chr7_2:65477851-65477870 | Msa1069700:intron | 35.0% |
| CATCCATATTCTCGAATCTA+CGG | + | chr7_2:65477903-65477922 | None:intergenic | 35.0% | |
| GTGAATGGAGAATAGTTGAA+TGG | - | chr7_2:65477941-65477960 | Msa1069700:CDS | 35.0% | |
| GAGAATAGTTGAATGGAATG+AGG | - | chr7_2:65477948-65477967 | Msa1069700:CDS | 35.0% | |
| TACAATTCATCATCCAGCTA+GGG | - | chr7_2:65478089-65478108 | Msa1069700:CDS | 35.0% | |
| ATTGTATTCATTACCCTAGC+TGG | + | chr7_2:65478105-65478124 | None:intergenic | 35.0% | |
| AAACTTATGATCCATGGAGA+GGG | + | chr7_2:65478381-65478400 | None:intergenic | 35.0% | |
| ! | AATCAGATAATTAGCTTGGC+TGG | - | chr7_2:65479639-65479658 | Msa1069700:intron | 35.0% |
| ! | AAAATTCGGTTTTGCATCGA+TGG | - | chr7_2:65479739-65479758 | Msa1069700:intron | 35.0% |
| AGGGAAAAACATATTCTTCC+TGG | - | chr7_2:65480063-65480082 | Msa1069700:intron | 35.0% | |
| TATAAGCAAAGTAGCATGTC+GGG | - | chr7_2:65480100-65480119 | Msa1069700:intron | 35.0% | |
| CAAAAAAAGATGTGAGTTGC+TGG | + | chr7_2:65480188-65480207 | None:intergenic | 35.0% | |
| TGATGAATTGTCAAGTTCCA+TGG | - | chr7_2:65480308-65480327 | Msa1069700:intron | 35.0% | |
| AGTATGTGTTTATAACGCCA+TGG | + | chr7_2:65480328-65480347 | None:intergenic | 35.0% | |
| TTGTATAGACCAAAGTGGAT+TGG | + | chr7_2:65480376-65480395 | None:intergenic | 35.0% | |
| TGCAATTGTATAGACCAAAG+TGG | + | chr7_2:65480381-65480400 | None:intergenic | 35.0% | |
| TACCAGCAGATACATGAAAT+AGG | + | chr7_2:65480558-65480577 | None:intergenic | 35.0% | |
| CATAAAGTCCACTTTGTACA+TGG | + | chr7_2:65480584-65480603 | None:intergenic | 35.0% | |
| ACTTCGAAGGTAGATATATG+TGG | + | chr7_2:65480726-65480745 | None:intergenic | 35.0% | |
| ! | AACTTCGGCTTTATCTTTGA+TGG | - | chr7_2:65480890-65480909 | Msa1069700:intron | 35.0% |
| ! | TCTTTTTGGATATGGAGATC+CGG | - | chr7_2:65480971-65480990 | Msa1069700:intron | 35.0% |
| ATCATCTGATGTTTGCAAGA+AGG | + | chr7_2:65481059-65481078 | None:intergenic | 35.0% | |
| TACATATGTTGCAACTGCTT+TGG | + | chr7_2:65481246-65481265 | None:intergenic | 35.0% | |
| CCTGAACATGATGTTACTAT+AGG | + | chr7_2:65481270-65481289 | None:intergenic | 35.0% | |
| CCTATAGTAACATCATGTTC+AGG | - | chr7_2:65481267-65481286 | Msa1069700:intron | 35.0% | |
| GTGCATGAATAAAGTTTGGT+TGG | + | chr7_2:65481574-65481593 | None:intergenic | 35.0% | |
| ACTCGTGCATGAATAAAGTT+TGG | + | chr7_2:65481578-65481597 | None:intergenic | 35.0% | |
| AATGTATTTGCTCCGAATTC+AGG | + | chr7_2:65481655-65481674 | None:intergenic | 35.0% | |
| TGTCTAACTCCTTAAGAAAG+TGG | + | chr7_2:65481883-65481902 | None:intergenic | 35.0% | |
| ATTCGATCTTAGTGAGTCAA+TGG | - | chr7_2:65482043-65482062 | Msa1069700:intron | 35.0% | |
| TTTATTCATGCACGAGTGTA+AGG | - | chr7_2:65482102-65482121 | Msa1069700:intron | 35.0% | |
| TGACTAACTCCTTAAGAAAG+TGG | + | chr7_2:65482142-65482161 | None:intergenic | 35.0% | |
| GGGCATGAATAAAATTTGGT+TGG | + | chr7_2:65482353-65482372 | None:intergenic | 35.0% | |
| TTTATTCATGCCCGATTGTA+AGG | - | chr7_2:65482360-65482379 | Msa1069700:intron | 35.0% | |
| ! | ACATGAACTCTTTAAGGAAG+TGG | + | chr7_2:65482647-65482666 | None:intergenic | 35.0% |
| ! | GGTTGTATATTTTCTTCGTC+AGG | + | chr7_2:65483705-65483724 | None:intergenic | 35.0% |
| ACATGACATTTGGAAAAGGT+TGG | + | chr7_2:65483726-65483745 | None:intergenic | 35.0% | |
| TCTGACATGACATTTGGAAA+AGG | + | chr7_2:65483730-65483749 | None:intergenic | 35.0% | |
| TTGTGTCTTAGACATGCAAT+TGG | - | chr7_2:65483936-65483955 | Msa1069700:intron | 35.0% | |
| TGGATGCATGAATTTGTCAT+CGG | - | chr7_2:65484293-65484312 | Msa1069700:CDS | 35.0% | |
| GTAGAATTTCTGATCCAACT+AGG | - | chr7_2:65484315-65484334 | Msa1069700:CDS | 35.0% | |
| ATTGTATTCCTTACCCTAGT+TGG | + | chr7_2:65484332-65484351 | None:intergenic | 35.0% | |
| !! | GGATCTTTAAGATATGAAGG+TGG | - | chr7_2:65484516-65484535 | Msa1069700:intron | 35.0% |
| GGAAATGAAACATGAGTTCA+TGG | + | chr7_2:65484607-65484626 | None:intergenic | 35.0% | |
| GAACTCATGTTTCATTTCCT+AGG | - | chr7_2:65484608-65484627 | Msa1069700:intron | 35.0% | |
| ! | CTTGGGAAGAATTTTGAACA+TGG | - | chr7_2:65484729-65484748 | Msa1069700:intron | 35.0% |
| ! | ACATGGTCTTTTAGTCCATT+TGG | - | chr7_2:65484746-65484765 | Msa1069700:intron | 35.0% |
| GGATCAAACTTGTATCCAAC+AGG | + | chr7_2:65477353-65477372 | None:intergenic | 40.0% | |
| ! | TCAAACAAGTGAGTTGGAAG+AGG | + | chr7_2:65477428-65477447 | None:intergenic | 40.0% |
| ATGTGTTTCAAACTGAGCCA+TGG | - | chr7_2:65477453-65477472 | Msa1069700:three_prime_UTR | 40.0% | |
| TCTTAGACATGCAGTTGGAA+GGG | - | chr7_2:65477690-65477709 | Msa1069700:intron | 40.0% | |
| GAACCGTAGATTCGAGAATA+TGG | - | chr7_2:65477897-65477916 | Msa1069700:CDS | 40.0% | |
| AATATGGATGCAAGAAGAGC+TGG | - | chr7_2:65477913-65477932 | Msa1069700:CDS | 40.0% | |
| TTTGTTTACTGGATAGGGCA+AGG | - | chr7_2:65478015-65478034 | Msa1069700:CDS | 40.0% | |
| ! | ATCAAGCTCTGATGACACAA+TGG | - | chr7_2:65478040-65478059 | Msa1069700:intron | 40.0% |
| GTACAATTCATCATCCAGCT+AGG | - | chr7_2:65478088-65478107 | Msa1069700:CDS | 40.0% | |
| AGGTGCCTATCGGATATTTA+AGG | - | chr7_2:65478320-65478339 | Msa1069700:intron | 40.0% | |
| AGGTGACAAAACTGAGAAGA+AGG | - | chr7_2:65478348-65478367 | Msa1069700:intron | 40.0% | |
| GAAACTTATGATCCATGGAG+AGG | + | chr7_2:65478382-65478401 | None:intergenic | 40.0% | |
| !! | AGGATTGACTTGATCGTTGA+CGG | + | chr7_2:65478587-65478606 | None:intergenic | 40.0% |
| !! | AGGATTGACTTGATCGTTGA+CGG | + | chr7_2:65478587-65478606 | None:intergenic | 40.0% |
| !! | AGGATTGACTTGATCGTTGA+CGG | + | chr7_2:65478587-65478606 | None:intergenic | 40.0% |
| CAAGCAATCTAACAGCCAAA+AGG | + | chr7_2:65479549-65479568 | None:intergenic | 40.0% | |
| GATACGAGACTTCCTAACTA+TGG | + | chr7_2:65479871-65479890 | None:intergenic | 40.0% | |
| GAAATAATGTAGCACACGTG+TGG | + | chr7_2:65480224-65480243 | None:intergenic | 40.0% | |
| ! | CTCGGTGAAGATAGTTGTTT+TGG | - | chr7_2:65480251-65480270 | Msa1069700:intron | 40.0% |
| CTCCTATTTCATGTATCTGC+TGG | - | chr7_2:65480553-65480572 | Msa1069700:intron | 40.0% | |
| TGGTATGTCCATGTACAAAG+TGG | - | chr7_2:65480573-65480592 | Msa1069700:intron | 40.0% | |
| ! | TGCAGTTCTTGCAGTTGATA+AGG | + | chr7_2:65480868-65480887 | None:intergenic | 40.0% |
| TGCAAGAACTGCAAGAACTT+CGG | - | chr7_2:65480875-65480894 | Msa1069700:intron | 40.0% | |
| ! | CTTTTTGGATATGGAGATCC+GGG | - | chr7_2:65480972-65480991 | Msa1069700:intron | 40.0% |
| ! | TTTTTGGATATGGAGATCCG+GGG | - | chr7_2:65480973-65480992 | Msa1069700:intron | 40.0% |
| !!! | TCTGATCAGTTTTAAGACCC+CGG | + | chr7_2:65480993-65481012 | None:intergenic | 40.0% |
| TGATGTTTGCAAGAAGGAAG+AGG | + | chr7_2:65481053-65481072 | None:intergenic | 40.0% | |
| TGATGTTTGCCCTCATTTGT+AGG | + | chr7_2:65481086-65481105 | None:intergenic | 40.0% | |
| TCAATTGTGCCCTCATTTGT+AGG | + | chr7_2:65481119-65481138 | None:intergenic | 40.0% | |
| ACGTACTGTCATTGCAAAAG+AGG | - | chr7_2:65481148-65481167 | Msa1069700:intron | 40.0% | |
| ATATGTTGCAACTGCTTTGG+TGG | + | chr7_2:65481243-65481262 | None:intergenic | 40.0% | |
| CTCACCGACACTGAATAATA+TGG | + | chr7_2:65481778-65481797 | None:intergenic | 40.0% | |
| GTCCGTATTTGTCTATTGAC+TGG | - | chr7_2:65482009-65482028 | Msa1069700:intron | 40.0% | |
| CTCACCAACACCGAATAATA+TGG | + | chr7_2:65482298-65482317 | None:intergenic | 40.0% | |
| TGAGTCAATGGTGACACAAA+GGG | - | chr7_2:65482561-65482580 | Msa1069700:intron | 40.0% | |
| CCAGTGAAGAAAGAGTTCTT+TGG | + | chr7_2:65483545-65483564 | None:intergenic | 40.0% | |
| CCAAAGAACTCTTTCTTCAC+TGG | - | chr7_2:65483542-65483561 | Msa1069700:intron | 40.0% | |
| AAGAGGACACCAAAAGTTCT+TGG | + | chr7_2:65483568-65483587 | None:intergenic | 40.0% | |
| !!! | ACTTTTGGTGTCAATCATGG+CGG | - | chr7_2:65483606-65483625 | Msa1069700:intron | 40.0% |
| TATTTCAAACTGAGCCATGG+AGG | - | chr7_2:65483758-65483777 | Msa1069700:intron | 40.0% | |
| ! | GTTTTCTTTCACAAACCTCC+TGG | + | chr7_2:65483787-65483806 | None:intergenic | 40.0% |
| TGTCTTAGACATGCAATTGG+AGG | - | chr7_2:65483939-65483958 | Msa1069700:intron | 40.0% | |
| GTCTTAGACATGCAATTGGA+GGG | - | chr7_2:65483940-65483959 | Msa1069700:intron | 40.0% | |
| TCTTAGACATGCAATTGGAG+GGG | - | chr7_2:65483941-65483960 | Msa1069700:intron | 40.0% | |
| CATCCATATTCTCGAACCTA+CGG | + | chr7_2:65484133-65484152 | None:intergenic | 40.0% | |
| AATATGGATGCAAGAAGAGC+TGG | - | chr7_2:65477913-65477932 | Msa1069700:CDS | 40.0% | |
| GTGAATGGCGAATAGTTCAA+AGG | - | chr7_2:65484171-65484190 | Msa1069700:CDS | 40.0% | |
| GCGAATAGTTCAAAGGAATG+AGG | - | chr7_2:65484178-65484197 | Msa1069700:CDS | 40.0% | |
| TATGTTTACTGGATAGGGCA+AGG | - | chr7_2:65484245-65484264 | Msa1069700:CDS | 40.0% | |
| ! | ATCAAGCTCTGATGACAAGA+TGG | - | chr7_2:65484270-65484289 | Msa1069700:CDS | 40.0% |
| TTTCTGATCCAACTAGGGTA+AGG | - | chr7_2:65484321-65484340 | Msa1069700:intron | 40.0% | |
| GAAACATGAGTTCATGGAGA+GGG | + | chr7_2:65484601-65484620 | None:intergenic | 40.0% | |
| TGAAACATGAGTTCATGGAG+AGG | + | chr7_2:65484602-65484621 | None:intergenic | 40.0% | |
| ! | GTCTTTTAGTCCATTTGGCA+AGG | - | chr7_2:65484751-65484770 | Msa1069700:CDS | 40.0% |
| TCAACAAGCTCGTGATCAGT+TGG | + | chr7_2:65477374-65477393 | None:intergenic | 45.0% | |
| ! | GCTTGTTGAGTACTACCTGA+CGG | - | chr7_2:65477385-65477404 | Msa1069700:three_prime_UTR | 45.0% |
| CTTGTTGAGTACTACCTGAC+GGG | - | chr7_2:65477386-65477405 | Msa1069700:three_prime_UTR | 45.0% | |
| TTGTTGAGTACTACCTGACG+GGG | - | chr7_2:65477387-65477406 | Msa1069700:three_prime_UTR | 45.0% | |
| ! | ACAAGTGAGTTGGAAGAGGT+AGG | + | chr7_2:65477424-65477443 | None:intergenic | 45.0% |
| TGTTTCAAACTGAGCCATGG+AGG | - | chr7_2:65477456-65477475 | Msa1069700:three_prime_UTR | 45.0% | |
| GTGTGTCTTAGACATGCAGT+TGG | - | chr7_2:65477685-65477704 | Msa1069700:intron | 45.0% | |
| GTCTTAGACATGCAGTTGGA+AGG | - | chr7_2:65477689-65477708 | Msa1069700:intron | 45.0% | |
| ! | AAGCTCTGATGACACAATGG+TGG | - | chr7_2:65478043-65478062 | Msa1069700:intron | 45.0% |
| TCAATGTAGGAGACAGCTGT+AGG | - | chr7_2:65478300-65478319 | Msa1069700:intron | 45.0% | |
| ! | GGCTGGTTGTCATCATTTCT+AGG | - | chr7_2:65479656-65479675 | Msa1069700:intron | 45.0% |
| GGGGAAGTAAACACTCGATT+AGG | - | chr7_2:65479800-65479819 | Msa1069700:intron | 45.0% | |
| TATATCCTCGAGCTTTCACC+AGG | + | chr7_2:65480084-65480103 | None:intergenic | 45.0% | |
| ATGTAGCACACGTGTGGATA+AGG | + | chr7_2:65480218-65480237 | None:intergenic | 45.0% | |
| ACTGTCATTGCAAAAGAGGC+TGG | - | chr7_2:65481152-65481171 | Msa1069700:intron | 45.0% | |
| CTCACCGACACCGAATAATA+TGG | + | chr7_2:65481520-65481539 | None:intergenic | 45.0% | |
| !! | ATTCAGTGTCGGTGAGTCAA+TGG | - | chr7_2:65481782-65481801 | Msa1069700:intron | 45.0% |
| CTCACCGACACCGAATAATA+TGG | + | chr7_2:65481520-65481539 | None:intergenic | 45.0% | |
| GTGAGTCAATGGTGACACAA+AGG | - | chr7_2:65482560-65482579 | Msa1069700:intron | 45.0% | |
| ! | CTTCACTGGCCAAGAACTTT+TGG | - | chr7_2:65483556-65483575 | Msa1069700:intron | 45.0% |
| TTGATCTACCTGCTGGATTC+AGG | - | chr7_2:65483644-65483663 | Msa1069700:intron | 45.0% | |
| TCTTTGATCTCAGGAACCGT+AGG | - | chr7_2:65484114-65484133 | Msa1069700:CDS | 45.0% | |
| GAACCGTAGGTTCGAGAATA+TGG | - | chr7_2:65484127-65484146 | Msa1069700:CDS | 45.0% | |
| GATGCAAGAAGAGCTGGAAA+TGG | - | chr7_2:65484149-65484168 | Msa1069700:CDS | 45.0% | |
| GAAGAGCTGGAAATGGTGAA+TGG | - | chr7_2:65484156-65484175 | Msa1069700:CDS | 45.0% | |
| ! | AAGCTCTGATGACAAGATGG+TGG | - | chr7_2:65484273-65484292 | Msa1069700:CDS | 45.0% |
| AAGATCCGATAGGCAGCTAT+AGG | + | chr7_2:65484503-65484522 | None:intergenic | 45.0% | |
| GGTGGCAAAAGATGAGAAGA+AGG | - | chr7_2:65484534-65484553 | Msa1069700:intron | 45.0% | |
| ACTTGCATCCTCCATTAGTG+TGG | + | chr7_2:65484563-65484582 | None:intergenic | 45.0% | |
| GTTAAGCTCTCCTTGCCAAA+TGG | + | chr7_2:65484764-65484783 | None:intergenic | 45.0% | |
| !!! | ACAAAAATTTAAAATTTAAA+TGG | + | chr7_2:65477604-65477623 | None:intergenic | 5.0% |
| !!! | ACTATTTATTATTTAATTTA+TGG | + | chr7_2:65478969-65478988 | None:intergenic | 5.0% |
| !!! | TATTTAAATTTTAAATAGTA+GGG | + | chr7_2:65479099-65479118 | None:intergenic | 5.0% |
| !! | TTTAATACATAAATAAATAA+GGG | + | chr7_2:65482731-65482750 | None:intergenic | 5.0% |
| !!! | TAATTTTATGTTATAATATT+TGG | + | chr7_2:65483188-65483207 | None:intergenic | 5.0% |
| !!! | AAAAAAAAAAAAAAAACTTT+TGG | - | chr7_2:65483591-65483610 | Msa1069700:intron | 5.0% |
| GCTGAGCTTCTTCTACCTGT+TGG | - | chr7_2:65477335-65477354 | Msa1069700:three_prime_UTR | 50.0% | |
| ! | GGTTGAGAATTTTCCCCGTC+AGG | + | chr7_2:65477403-65477422 | None:intergenic | 50.0% |
| TAGACATGCAGTTGGAAGGG+AGG | - | chr7_2:65477693-65477712 | Msa1069700:intron | 50.0% | |
| GATGCAAGAAGAGCTGGAGA+TGG | - | chr7_2:65477919-65477938 | Msa1069700:CDS | 50.0% | |
| GAAGAGCTGGAGATGGTGAA+TGG | - | chr7_2:65477926-65477945 | Msa1069700:CDS | 50.0% | |
| AGACAGCTGTAGGTGCCTAT+CGG | - | chr7_2:65478310-65478329 | Msa1069700:intron | 50.0% | |
| CTTATGATCCATGGAGAGGG+AGG | + | chr7_2:65478378-65478397 | None:intergenic | 50.0% | |
| TTCTTCCTGGTGAAAGCTCG+AGG | - | chr7_2:65480076-65480095 | Msa1069700:intron | 50.0% | |
| !! | ATTCGGTGTCGGTGAGTCAA+TGG | - | chr7_2:65481524-65481543 | Msa1069700:intron | 50.0% |
| !! | ATTCGGTGTCGGTGAGTCAA+TGG | - | chr7_2:65481524-65481543 | Msa1069700:intron | 50.0% |
| GGATCAAACCTGAATCCAGC+AGG | + | chr7_2:65483655-65483674 | None:intergenic | 50.0% | |
| TCAACAAGTACGCGATCGGT+TGG | + | chr7_2:65483676-65483695 | None:intergenic | 50.0% | |
| GCACTCAACAAGTACGCGAT+CGG | + | chr7_2:65483680-65483699 | None:intergenic | 50.0% | |
| TAGACATGCAATTGGAGGGG+AGG | - | chr7_2:65483944-65483963 | Msa1069700:intron | 50.0% | |
| GGTCACCTATAGCTGCCTAT+CGG | - | chr7_2:65484495-65484514 | Msa1069700:intron | 50.0% | |
| GAAGAAGGCCACCACACTAA+TGG | - | chr7_2:65484549-65484568 | Msa1069700:intron | 50.0% | |
| TGCATCCTCCATTAGTGTGG+TGG | + | chr7_2:65484560-65484579 | None:intergenic | 50.0% | |
| ACATGAGTTCATGGAGAGGG+AGG | + | chr7_2:65484598-65484617 | None:intergenic | 50.0% | |
| ! | GGCTGGTTGCCATCATTTCT+AGG | - | chr7_2:65484807-65484826 | Msa1069700:CDS | 50.0% |
| AAACCTCTTGGCAGCCTCCA+TGG | + | chr7_2:65477473-65477492 | None:intergenic | 55.0% | |
| TGATCCATGGAGAGGGAGGA+GGG | + | chr7_2:65478374-65478393 | None:intergenic | 55.0% | |
| ATGATCCATGGAGAGGGAGG+AGG | + | chr7_2:65478375-65478394 | None:intergenic | 55.0% | |
| CATGGCGGTAGCTAATGCTG+AGG | - | chr7_2:65483621-65483640 | Msa1069700:intron | 55.0% | |
| ! | GCTGAGGTTGATCTACCTGC+TGG | - | chr7_2:65483637-65483656 | Msa1069700:intron | 55.0% |
| GAAGGCCACCACACTAATGG+AGG | - | chr7_2:65484552-65484571 | Msa1069700:intron | 55.0% | |
| AGTTCATGGAGAGGGAGGAG+GGG | + | chr7_2:65484593-65484612 | None:intergenic | 55.0% | |
| GAGTTCATGGAGAGGGAGGA+GGG | + | chr7_2:65484594-65484613 | None:intergenic | 55.0% | |
| TGAGTTCATGGAGAGGGAGG+AGG | + | chr7_2:65484595-65484614 | None:intergenic | 55.0% | |
| AAACCTCCTGGCAGCCTCCA+TGG | + | chr7_2:65483775-65483794 | None:intergenic | 60.0% | |
| GAGCCATGGAGGCTGCCAAG+AGG | - | chr7_2:65477467-65477486 | Msa1069700:three_prime_UTR | 65.0% | |
| AAGGCCCTCCTCCCTCTCCA+TGG | - | chr7_2:65478367-65478386 | Msa1069700:intron | 65.0% | |
| ACTGAGCCATGGAGGCTGCC+AGG | - | chr7_2:65477464-65477483 | Msa1069700:three_prime_UTR | 65.0% | |
| GAGCCATGGAGGCTGCCAGG+AGG | - | chr7_2:65483769-65483788 | Msa1069700:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 65477320 | 65484870 | 65477320 | ID=Msa1069700;Name=Msa1069700 |
| chr7_2 | mRNA | 65477320 | 65484870 | 65477320 | ID=Msa1069700-mRNA-1;Parent=Msa1069700;Name=Msa1069700-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.4|0.16|1|0.2|0|6|338|260 |
| chr7_2 | exon | 65477320 | 65477696 | 65477320 | ID=Msa1069700-mRNA-1:exon:13796;Parent=Msa1069700-mRNA-1 |
| chr7_2 | exon | 65477853 | 65478054 | 65477853 | ID=Msa1069700-mRNA-1:exon:13795;Parent=Msa1069700-mRNA-1 |
| chr7_2 | exon | 65478085 | 65478112 | 65478085 | ID=Msa1069700-mRNA-1:exon:13794;Parent=Msa1069700-mRNA-1 |
| chr7_2 | exon | 65478400 | 65478558 | 65478400 | ID=Msa1069700-mRNA-1:exon:13793;Parent=Msa1069700-mRNA-1 |
| chr7_2 | exon | 65484103 | 65484335 | 65484103 | ID=Msa1069700-mRNA-1:exon:13792;Parent=Msa1069700-mRNA-1 |
| chr7_2 | exon | 65484749 | 65484870 | 65484749 | ID=Msa1069700-mRNA-1:exon:13791;Parent=Msa1069700-mRNA-1 |
| chr7_2 | CDS | 65484749 | 65484870 | 65484749 | ID=Msa1069700-mRNA-1:cds;Parent=Msa1069700-mRNA-1 |
| chr7_2 | CDS | 65484103 | 65484335 | 65484103 | ID=Msa1069700-mRNA-1:cds;Parent=Msa1069700-mRNA-1 |
| chr7_2 | CDS | 65478400 | 65478558 | 65478400 | ID=Msa1069700-mRNA-1:cds;Parent=Msa1069700-mRNA-1 |
| chr7_2 | CDS | 65478085 | 65478112 | 65478085 | ID=Msa1069700-mRNA-1:cds;Parent=Msa1069700-mRNA-1 |
| chr7_2 | CDS | 65477853 | 65478054 | 65477853 | ID=Msa1069700-mRNA-1:cds;Parent=Msa1069700-mRNA-1 |
| chr7_2 | CDS | 65477658 | 65477696 | 65477658 | ID=Msa1069700-mRNA-1:cds;Parent=Msa1069700-mRNA-1 |
| chr7_2 | three_prime_UTR | 65477320 | 65477657 | 65477320 | ID=Msa1069700-mRNA-1:three_prime_utr;Parent=Msa1069700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
