AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1075170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1075170 MtrunA17_Chr7g0258471 89.706 340 31 2 1 339 75 411 0.0 562
Msa1075170 MtrunA17_Chr1g0175021 52.521 238 74 10 114 323 8 234 4.45e-59 190
Msa1075170 MtrunA17_Chr3g0122411 36.981 265 119 7 17 256 120 361 2.76e-41 149
Msa1075170 MtrunA17_Chr7g0231911 50.376 133 61 1 14 146 101 228 6.52e-38 137
Msa1075170 MtrunA17_Chr8g0360361 70.732 82 24 0 64 145 62 143 3.93e-37 131
Msa1075170 MtrunA17_Chr4g0061651 52.713 129 57 1 13 141 73 197 1.50e-36 137
Msa1075170 MtrunA17_Chr4g0046991 72.727 77 21 0 64 140 70 146 4.65e-36 127
Msa1075170 MtrunA17_Chr2g0308321 57.252 131 53 3 39 169 144 271 7.87e-36 136
Msa1075170 MtrunA17_Chr3g0132091 52.679 112 53 0 35 146 41 152 4.61e-35 130
Msa1075170 MtrunA17_Chr5g0420051 71.429 77 22 0 65 141 179 255 2.19e-34 130
Msa1075170 MtrunA17_Chr8g0334671 67.857 84 27 0 57 140 177 260 8.56e-34 127
Msa1075170 MtrunA17_Chr2g0282521 65.517 87 26 1 56 142 57 139 2.16e-33 120
Msa1075170 MtrunA17_Chr7g0224821 63.636 88 32 0 62 149 72 159 4.07e-33 125
Msa1075170 MtrunA17_Chr1g0175031 61.905 105 31 2 14 113 20 120 1.75e-32 118
Msa1075170 MtrunA17_Chr8g0386271 59.091 88 36 0 62 149 94 181 1.33e-31 122
Msa1075170 MtrunA17_Chr8g0377401 48.855 131 49 2 9 139 122 234 1.81e-31 119
Msa1075170 MtrunA17_Chr2g0302791 51.261 119 51 1 52 170 124 235 1.93e-31 125
Msa1075170 MtrunA17_Chr8g0377421 47.581 124 62 2 18 140 84 205 2.23e-31 120
Msa1075170 MtrunA17_Chr1g0194121 51.111 135 59 3 10 140 89 220 2.25e-31 125
Msa1075170 MtrunA17_Chr1g0162871 58.333 96 40 0 51 146 88 183 1.09e-30 122
Msa1075170 MtrunA17_Chr7g0270541 68.919 74 23 0 67 140 145 218 3.56e-29 118
Msa1075170 MtrunA17_Chr2g0286661 51.351 74 36 0 67 140 103 176 1.70e-21 95.5
Msa1075170 MtrunA17_Chr8g0377431 42.149 121 64 3 4 120 86 204 1.03e-19 86.3
Msa1075170 MtrunA17_Chr2g0317041 61.538 52 20 0 65 116 97 148 2.62e-15 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1075170 AT2G42200.1 42.448 384 120 17 17 339 32 375 4.15e-66 213
Msa1075170 AT3G57920.1 39.516 372 132 17 17 339 27 354 4.87e-62 202
Msa1075170 AT1G27370.6 47.887 142 56 3 8 141 119 250 5.14e-37 136
Msa1075170 AT5G43270.3 55.469 128 56 1 16 143 119 245 9.42e-37 137
Msa1075170 AT5G43270.1 55.469 128 56 1 16 143 119 245 9.42e-37 137
Msa1075170 AT5G43270.2 55.469 128 56 1 16 143 119 245 9.42e-37 137
Msa1075170 AT1G27370.1 47.887 142 56 3 8 141 119 250 1.69e-36 136
Msa1075170 AT1G27370.5 47.887 142 56 3 8 141 119 250 1.69e-36 136
Msa1075170 AT1G27370.3 47.887 142 56 3 8 141 119 250 1.69e-36 136
Msa1075170 AT1G27370.2 47.887 142 56 3 8 141 119 250 1.69e-36 136
Msa1075170 AT1G27370.4 47.887 142 56 3 8 141 119 250 1.69e-36 136
Msa1075170 AT1G27370.7 47.887 142 56 3 8 141 119 250 1.69e-36 136
Msa1075170 AT1G69170.1 54.015 137 51 3 51 185 109 235 2.92e-36 135
Msa1075170 AT1G27360.2 50.000 134 64 2 8 141 119 249 4.93e-36 134
Msa1075170 AT1G27360.1 50.000 134 64 2 8 141 119 249 4.93e-36 134
Msa1075170 AT1G27360.3 50.000 134 64 2 8 141 119 249 4.93e-36 134
Msa1075170 AT1G27360.4 50.000 134 64 2 8 141 119 249 4.93e-36 134
Msa1075170 AT2G33810.1 71.622 74 21 0 67 140 54 127 9.31e-35 124
Msa1075170 AT5G50570.1 48.000 150 71 2 4 146 31 180 2.84e-34 129
Msa1075170 AT5G50570.2 48.000 150 71 2 4 146 31 180 2.84e-34 129
Msa1075170 AT5G50670.1 48.000 150 71 2 4 146 31 180 2.84e-34 129
Msa1075170 AT5G50670.2 48.000 150 71 2 4 146 31 180 2.84e-34 129
Msa1075170 AT1G02065.1 52.800 125 48 2 16 140 148 261 9.18e-34 127
Msa1075170 AT3G15270.1 68.919 74 23 0 67 140 63 136 1.79e-33 122
Msa1075170 AT1G53160.3 46.667 135 55 3 55 187 47 166 9.82e-33 120
Msa1075170 AT1G53160.2 61.538 91 30 1 55 145 47 132 2.94e-32 119
Msa1075170 AT1G53160.1 61.538 91 30 1 55 145 47 132 2.94e-32 119
Msa1075170 AT2G47070.1 62.366 93 28 1 51 143 97 182 4.30e-32 127
Msa1075170 AT3G60030.1 49.587 121 61 0 26 146 86 206 6.35e-32 127
Msa1075170 AT1G76580.2 60.227 88 35 0 65 152 112 199 2.53e-30 122
Msa1075170 AT1G76580.3 60.227 88 35 0 65 152 112 199 3.09e-30 121
Msa1075170 AT1G76580.1 60.227 88 35 0 65 152 112 199 3.99e-30 121
Msa1075170 AT1G20980.1 62.222 90 33 1 51 140 105 193 7.10e-29 118
Msa1075170 AT5G18830.2 46.154 91 45 1 52 142 127 213 8.29e-21 94.0
Msa1075170 AT5G18830.3 46.154 91 45 1 52 142 127 213 8.81e-21 94.0
Msa1075170 AT5G18830.1 46.154 91 45 1 52 142 127 213 1.01e-20 94.0
Msa1075170 AT2G47070.2 75.472 53 13 0 91 143 1 53 3.95e-20 92.0
Msa1075170 AT1G02065.2 45.370 108 46 3 16 121 148 244 3.23e-19 85.9

Find 128 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCCCTACTGTTACTGTTTC+TGG 0.047497 7_2:-73295410 Msa1075170:CDS
TAATGCACTTGTTTGCTTTC+AGG 0.104893 7_2:-73292339 Msa1075170:three_prime_UTR
TCTCTTAATGGCTTAAAATT+TGG 0.163500 7_2:-73295656 Msa1075170:CDS
GATTGTTGTGGTCTGATTTC+CGG 0.239907 7_2:+73292797 None:intergenic
TCGGAAGAGTCCTCTCTTAA+TGG 0.276595 7_2:-73295668 Msa1075170:CDS
CTATGATAATCTCAAATAAC+TGG 0.299723 7_2:+73292119 None:intergenic
TTATCATAGTTTCAAATTGC+AGG 0.317364 7_2:-73292105 Msa1075170:three_prime_UTR
GGAGTGGTGGTTGTTATTGT+TGG 0.333841 7_2:+73295828 None:intergenic
GAATTTCTCAGACTAAGTTT+TGG 0.340913 7_2:+73292831 None:intergenic
ATTGTTGTGGTCTGATTTCC+GGG 0.344809 7_2:+73292798 None:intergenic
AACCTCACACCAATGGATTC+AGG 0.357567 7_2:-73295704 Msa1075170:exon
AATAACATGCTGAATTTCAA+TGG 0.376067 7_2:-73292576 Msa1075170:CDS
GGTGGGCCTTGCTTCATTTG+TGG 0.377913 7_2:-73292210 Msa1075170:three_prime_UTR
GCAGGGAAGGAGGCATTATA+TGG 0.380825 7_2:-73292406 Msa1075170:CDS
TCTTCTTCTGGTTCAAAGAA+AGG 0.384894 7_2:-73295554 Msa1075170:CDS
ATTTGTTTGTTTAAACTGTT+TGG 0.397402 7_2:-73292236 Msa1075170:three_prime_UTR
CGAGCTTGATCTGTCGCAGC+AGG 0.402927 7_2:-73292424 Msa1075170:CDS
AACAATCGGTTGGCCTTGGC+CGG 0.403146 7_2:-73292781 Msa1075170:CDS
CAGAGGTGGCAGCTTCTTGA+TGG 0.405708 7_2:-73292868 Msa1075170:CDS
TTCAGGAGGCAACTCTTCTT+CGG 0.406824 7_2:-73295687 Msa1075170:CDS
GGTTGCTAGATTGTGTTCAT+TGG 0.409385 7_2:+73295734 None:intergenic
AGTTTCCTCGGGAGGATGTC+TGG 0.417156 7_2:+73292689 None:intergenic
GACTCCAGTGTAAGTTTCCT+CGG 0.430936 7_2:+73292677 None:intergenic
GAATCCATTGGTGTGAGGTT+TGG 0.434980 7_2:+73295707 None:intergenic
ATATGGATGTAGAACATTCC+AGG 0.443177 7_2:-73292389 Msa1075170:CDS
AAGAAGAGAGTGAATGATAG+TGG 0.443686 7_2:+73295872 None:intergenic
TCTTGCAAGGTTTGGTAGGT+GGG 0.445397 7_2:-73292728 Msa1075170:CDS
CTCTTCTGTCAAATCAAACA+TGG 0.449340 7_2:-73292632 Msa1075170:CDS
TAAGAGTGAGAGAATAGTAT+AGG 0.450744 7_2:+73295791 None:intergenic
TTCTTGCAAGGTTTGGTAGG+TGG 0.461450 7_2:-73292729 Msa1075170:CDS
ATGTTATTCAATCCAGGACT+TGG 0.463473 7_2:+73292591 None:intergenic
CAGCTTGCTGAGTTTGATCA+AGG 0.464199 7_2:-73293143 Msa1075170:CDS
AATGTGACCCCGGCCAAGAT+CGG 0.466474 7_2:+73292476 None:intergenic
GTAGGTGGGACAAGCTTCCC+TGG 0.467152 7_2:-73292714 Msa1075170:CDS
AGGTTAAGAGAGAGCTGGGT+GGG 0.469309 7_2:+73293066 None:intergenic
GTGGAAGACAAAAGAGGAAG+AGG 0.472761 7_2:+73295904 None:intergenic
AGGAAAATGAGAAGTGAACT+AGG 0.473101 7_2:-73292282 Msa1075170:three_prime_UTR
CAATCGGTTGGCCTTGGCCG+GGG 0.476765 7_2:-73292779 Msa1075170:CDS
TTGGCCTTGGCCGGGGAACA+CGG 0.477293 7_2:-73292772 Msa1075170:CDS
TCCATTGGTGTGAGGTTTGG+TGG 0.478961 7_2:+73295710 None:intergenic
ACAATCGGTTGGCCTTGGCC+GGG 0.480117 7_2:-73292780 Msa1075170:CDS
TGACCATTGAGAAGATTCAT+AGG 0.480203 7_2:+73292365 None:intergenic
TTTAAACTGTTTGGCAAGGT+GGG 0.485480 7_2:-73292227 Msa1075170:three_prime_UTR
TTCAGCATGTTATTCAATCC+AGG 0.487732 7_2:+73292585 None:intergenic
TATCTTCAAAATAGATTCGT+TGG 0.488281 7_2:+73295633 None:intergenic
TATGACCAGCTAGTCGTCTC+CGG 0.489324 7_2:+73293108 None:intergenic
CTACCAAACCTTGCAAGAAA+AGG 0.489810 7_2:+73292733 None:intergenic
CCACAACAATCGGTTGGCCT+TGG 0.489925 7_2:-73292785 Msa1075170:CDS
TTGAGAAGATTCATAGGCCC+TGG 0.491228 7_2:+73292371 None:intergenic
GTGGTCTGATTTCCGGGTGG+TGG 0.494603 7_2:+73292804 None:intergenic
TTTAATGATCGCTAAGTGAG+AGG 0.497079 7_2:-73292171 Msa1075170:three_prime_UTR
GACTCCGTGTTCCCCGGCCA+AGG 0.497185 7_2:+73292768 None:intergenic
GTTTAAACTGTTTGGCAAGG+TGG 0.497231 7_2:-73292228 Msa1075170:three_prime_UTR
CCACCTCGGTGTCAAGTTGA+AGG 0.497533 7_2:-73295503 Msa1075170:CDS
ATAACATGCTGAATTTCAAT+GGG 0.498202 7_2:-73292575 Msa1075170:CDS
TTTCACAAATATTTGAACTC+AGG 0.499742 7_2:-73292302 Msa1075170:three_prime_UTR
CTGTTTCTGGTCTACAACAA+AGG 0.499773 7_2:-73295397 Msa1075170:CDS
CGAAACGCAGAACCAAGTCC+TGG 0.499881 7_2:-73292603 Msa1075170:CDS
GGAAATCAGACCACAACAAT+CGG 0.506712 7_2:-73292795 Msa1075170:CDS
GTGAGAGAATAGTATAGGTG+AGG 0.511580 7_2:+73295796 None:intergenic
TGAGAGAATAGTATAGGTGA+GGG 0.515264 7_2:+73295797 None:intergenic
GAAGACAAAAGAGGAAGAGG+TGG 0.515918 7_2:+73295907 None:intergenic
ACAAAAGAGGAAGAGGTGGA+AGG 0.517306 7_2:+73295911 None:intergenic
TCGGGAGGATGTCTGGCACC+AGG 0.517700 7_2:+73292696 None:intergenic
AGAAGAAGAACTAGCAGCAA+TGG 0.529953 7_2:+73295574 None:intergenic
GGTTAAGAGAGAGCTGGGTG+GGG 0.530104 7_2:+73293067 None:intergenic
CCTCTCGGTAGCCAACTCTC+TGG 0.530975 7_2:-73292447 Msa1075170:CDS
GTTAAGAGAGAGCTGGGTGG+GGG 0.532570 7_2:+73293068 None:intergenic
AGAGAATAGTATAGGTGAGG+GGG 0.537430 7_2:+73295799 None:intergenic
TCTGGTTCAAAGAAAGGAAG+AGG 0.539167 7_2:-73295548 Msa1075170:CDS
ACGTGAGGTTAAGAGAGAGC+TGG 0.539304 7_2:+73293061 None:intergenic
CGTGAGGTTAAGAGAGAGCT+GGG 0.546066 7_2:+73293062 None:intergenic
TTTGTTTAAACTGTTTGGCA+AGG 0.547360 7_2:-73292231 Msa1075170:three_prime_UTR
AGTGAAGTGGAAGACAAAAG+AGG 0.550668 7_2:+73295898 None:intergenic
CGGGAGGATGTCTGGCACCA+GGG 0.551042 7_2:+73292697 None:intergenic
CAACTTCCTACATCTTCTCA+TGG 0.554762 7_2:-73292540 Msa1075170:CDS
GATCAAGCTCGCCAGAGAGT+TGG 0.556325 7_2:+73292436 None:intergenic
ACTCCAGTGTAAGTTTCCTC+GGG 0.556391 7_2:+73292678 None:intergenic
TCTTCTGTCAAATCAAACAT+GGG 0.559601 7_2:-73292631 Msa1075170:CDS
ACCACCAAACCTCACACCAA+TGG 0.563604 7_2:-73295711 Msa1075170:exon
AGTTGCCGGAGACGACTAGC+TGG 0.563944 7_2:-73293113 Msa1075170:CDS
AGAAGAACTAGCAGCAATGG+TGG 0.566347 7_2:+73295577 None:intergenic
GGGCCTATGAATCTTCTCAA+TGG 0.567201 7_2:-73292368 Msa1075170:CDS
TCCTACATCTTCTCATGGTG+TGG 0.568881 7_2:-73292535 Msa1075170:CDS
CTCCTGAATCCATTGGTGTG+AGG 0.573541 7_2:+73295702 None:intergenic
GACCAGAAACAGTAACAGTA+GGG 0.576648 7_2:+73295408 None:intergenic
TATGGATGTAGAACATTCCA+GGG 0.576787 7_2:-73292388 Msa1075170:CDS
AGATGTAGGAAGTTGTGTCA+TGG 0.581014 7_2:+73292548 None:intergenic
ATTGGTGTGAGGTTTGGTGG+TGG 0.584159 7_2:+73295713 None:intergenic
TTAATGATCGCTAAGTGAGA+GGG 0.588275 7_2:-73292170 Msa1075170:three_prime_UTR
TTGATCTGTCGCAGCAGGGA+AGG 0.589630 7_2:-73292419 Msa1075170:CDS
ATCTGTCGCAGCAGGGAAGG+AGG 0.591353 7_2:-73292416 Msa1075170:CDS
ATCAGACCACAACAATCGGT+TGG 0.596554 7_2:-73292791 Msa1075170:CDS
GGAAAATGAGAAGTGAACTA+GGG 0.596796 7_2:-73292281 Msa1075170:three_prime_UTR
AGAAATTCACTTCCACCACC+CGG 0.604886 7_2:-73292816 Msa1075170:CDS
GGTCACATTTCACAGCCTCT+CGG 0.605085 7_2:-73292462 Msa1075170:CDS
AGACCAGAAACAGTAACAGT+AGG 0.606139 7_2:+73295407 None:intergenic
GAGAGAATAGTATAGGTGAG+GGG 0.607703 7_2:+73295798 None:intergenic
TGTGACCCCGGCCAAGATCG+GGG 0.609613 7_2:+73292478 None:intergenic
ATTGTTTGAAACTTGATGCA+TGG 0.609636 7_2:+73292512 None:intergenic
GGTTCAAAGAAAGGAAGAGG+TGG 0.614988 7_2:-73295545 Msa1075170:CDS
TGCAAGAAAAGGTTGTCAGA+TGG 0.616796 7_2:+73292744 None:intergenic
GAGAATAGTATAGGTGAGGG+GGG 0.622222 7_2:+73295800 None:intergenic
AGAGATAACAAACCACGAAG+TGG 0.628671 7_2:+73292144 None:intergenic
CCTCCCGAGGAAACTTACAC+TGG 0.634056 7_2:-73292681 Msa1075170:CDS
CCAGTGTAAGTTTCCTCGGG+AGG 0.637090 7_2:+73292681 None:intergenic
GAGGCTGTGAAATGTGACCC+CGG 0.637432 7_2:+73292466 None:intergenic
ATGATAGTGGAAAAGTGAAG+TGG 0.643272 7_2:+73295885 None:intergenic
AAAGTTCCACAAATGAAGCA+AGG 0.643758 7_2:+73292204 None:intergenic
TATGATAATCTCAAATAACT+GGG 0.644155 7_2:+73292120 None:intergenic
GAGCTTGATCTGTCGCAGCA+GGG 0.644837 7_2:-73292423 Msa1075170:CDS
AGAAAGCCTGGCAAAACGTG+AGG 0.647012 7_2:+73293046 None:intergenic
CCAAGGCCAACCGATTGTTG+TGG 0.647809 7_2:+73292785 None:intergenic
CTTCTGTCAAATCAAACATG+GGG 0.651750 7_2:-73292630 Msa1075170:CDS
GCCACACCATGAGAAGATGT+AGG 0.656605 7_2:+73292534 None:intergenic
GTTCAAAGAAAGGAAGAGGT+GGG 0.656815 7_2:-73295544 Msa1075170:CDS
GAGTTGCCTCCTGAATCCAT+TGG 0.670435 7_2:+73295695 None:intergenic
TTCAACATTCTCAACCACCT+CGG 0.675950 7_2:-73295517 Msa1075170:CDS
TGGTGCCAGACATCCTCCCG+AGG 0.679309 7_2:-73292694 Msa1075170:CDS
CCTTCAACTTGACACCGAGG+TGG 0.683119 7_2:+73295503 None:intergenic
GAGGTTAAGAGAGAGCTGGG+TGG 0.689151 7_2:+73293065 None:intergenic
TCAAGTTTCAAACAATTACG+AGG 0.690642 7_2:-73292505 Msa1075170:CDS
CCAGAGAGTTGGCTACCGAG+AGG 0.703528 7_2:+73292447 None:intergenic
ACAGGTAACAGTGACAGAGG+TGG 0.704297 7_2:-73292882 Msa1075170:intron
TCGACAGGTAACAGTGACAG+AGG 0.705027 7_2:-73292885 Msa1075170:intron
CTCACACCAATGGATTCAGG+AGG 0.709638 7_2:-73295701 Msa1075170:exon
CATCCTTCAACTTGACACCG+AGG 0.727400 7_2:+73295500 None:intergenic
GTTGTGGTCTGATTTCCGGG+TGG 0.754915 7_2:+73292801 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTGATTCTTTTTTTTATT+TGG - chr7_2:73293127-73293146 Msa1075170:CDS 10.0%
!!! TATATATAATTTGATTTATC+TGG - chr7_2:73293320-73293339 Msa1075170:intron 10.0%
!! AATGAAATTGAATTAAAGTA+TGG - chr7_2:73293522-73293541 Msa1075170:intron 15.0%
!! CTAATTAATAAGATAACTAA+TGG - chr7_2:73293770-73293789 Msa1075170:intron 15.0%
!!! TTTTCAAATTATTCACATTA+TGG + chr7_2:73294326-73294345 None:intergenic 15.0%
!! TAATGTGAATAATTTGAAAA+TGG - chr7_2:73294326-73294345 Msa1075170:intron 15.0%
!! TGAATAAATAAGAAAACTAA+AGG - chr7_2:73294593-73294612 Msa1075170:intron 15.0%
!! ATTAAACAATTTCAAATACT+TGG - chr7_2:73295101-73295120 Msa1075170:intron 15.0%
!!! TATTTCTGATAAAATGTGTA+TGG - chr7_2:73292711-73292730 Msa1075170:CDS 20.0%
!! TTGCTCTCAAAAAAAAAAAA+AGG + chr7_2:73292804-73292823 None:intergenic 20.0%
!!! TATTTTATTCTGTTATTCTC+CGG - chr7_2:73292827-73292846 Msa1075170:CDS 20.0%
!!! AACTTTTTTTTATAACTCCA+TGG + chr7_2:73293350-73293369 None:intergenic 20.0%
!!! ATAAAAAAAAGTTCTGGTTT+AGG - chr7_2:73293357-73293376 Msa1075170:intron 20.0%
!!! ACACATATCATTTTCATAAA+GGG + chr7_2:73293402-73293421 None:intergenic 20.0%
!! ATAAAACTAAACCAAATACT+TGG + chr7_2:73293603-73293622 None:intergenic 20.0%
!!! TTCATTTTGTGATTATTCAA+TGG - chr7_2:73293944-73293963 Msa1075170:intron 20.0%
!! TTAGATTCTTAAAACATCTT+CGG + chr7_2:73294417-73294436 None:intergenic 20.0%
!! TGTCTATCTTAATTTATCAT+GGG - chr7_2:73294723-73294742 Msa1075170:intron 20.0%
!! ATATAATCTTAACTAAGAGT+TGG + chr7_2:73294752-73294771 None:intergenic 20.0%
!! ATTTGTTTGTTTAAACTGTT+TGG - chr7_2:73295781-73295800 Msa1075170:five_prime_UTR 20.0%
!! TATGATAATCTCAAATAACT+GGG + chr7_2:73295900-73295919 None:intergenic 20.0%
!! AAATTTTAAGCCATTAAGAG+AGG + chr7_2:73292362-73292381 None:intergenic 25.0%
! TCTCTTAATGGCTTAAAATT+TGG - chr7_2:73292361-73292380 Msa1075170:CDS 25.0%
! TATCTTCAAAATAGATTCGT+TGG + chr7_2:73292387-73292406 None:intergenic 25.0%
! AAGAAGAAAAAGAGGAAATA+GGG + chr7_2:73292683-73292702 None:intergenic 25.0%
! AAAAGTTGAAGAAGAAAAAG+AGG + chr7_2:73292691-73292710 None:intergenic 25.0%
!! ATTTTATTCTGTTATTCTCC+GGG - chr7_2:73292828-73292847 Msa1075170:CDS 25.0%
! ACCTATAATACAATAAAACC+CGG + chr7_2:73292849-73292868 None:intergenic 25.0%
! TATTATAGGTGTAGTATTGT+AGG - chr7_2:73292859-73292878 Msa1075170:CDS 25.0%
!! TGCTTTTGATAAGTTTGATT+TGG - chr7_2:73293013-73293032 Msa1075170:intron 25.0%
!!! GCTTTTGATAAGTTTGATTT+GGG - chr7_2:73293014-73293033 Msa1075170:intron 25.0%
!! AAGAATCAAATTCTCTGAAA+AGG + chr7_2:73293118-73293137 None:intergenic 25.0%
! GGAGTTATAAAAAAAAGTTC+TGG - chr7_2:73293351-73293370 Msa1075170:intron 25.0%
!! CACACATATCATTTTCATAA+AGG + chr7_2:73293403-73293422 None:intergenic 25.0%
! AAAGTATGGACTTAGAAATT+AGG - chr7_2:73293536-73293555 Msa1075170:intron 25.0%
! GTATGATAAAACCAAGTATT+TGG - chr7_2:73293589-73293608 Msa1075170:intron 25.0%
! AGGTTCATTTAGATCAATAA+AGG + chr7_2:73293636-73293655 None:intergenic 25.0%
! TTATTGATCTAAATGAACCT+AGG - chr7_2:73293636-73293655 Msa1075170:intron 25.0%
! TATTGATCTAAATGAACCTA+GGG - chr7_2:73293637-73293656 Msa1075170:intron 25.0%
! AATAGTACTAATTCTCACTA+AGG + chr7_2:73293884-73293903 None:intergenic 25.0%
! TTAGTGAGAATTAGTACTAT+TGG - chr7_2:73293883-73293902 Msa1075170:intron 25.0%
!! AACCAACATTCTTATGTTTT+AGG - chr7_2:73294520-73294539 Msa1075170:intron 25.0%
! CTGCCTAAAAAATAACATAA+GGG + chr7_2:73294549-73294568 None:intergenic 25.0%
! GTGTCTATCTTAATTTATCA+TGG - chr7_2:73294722-73294741 Msa1075170:intron 25.0%
!! ACTTTCAGTTTTTGTTCAAT+TGG - chr7_2:73295046-73295065 Msa1075170:intron 25.0%
! TTCAACTTGTACTAAATTTC+TGG - chr7_2:73295075-73295094 Msa1075170:intron 25.0%
!! AATTTCTCAGACTAAGTTTT+GGG + chr7_2:73295188-73295207 None:intergenic 25.0%
! AATAACATGCTGAATTTCAA+TGG - chr7_2:73295441-73295460 Msa1075170:CDS 25.0%
! ATAACATGCTGAATTTCAAT+GGG - chr7_2:73295442-73295461 Msa1075170:CDS 25.0%
! TTTCACAAATATTTGAACTC+AGG - chr7_2:73295715-73295734 Msa1075170:five_prime_UTR 25.0%
! CTATGATAATCTCAAATAAC+TGG + chr7_2:73295901-73295920 None:intergenic 25.0%
! TTATCATAGTTTCAAATTGC+AGG - chr7_2:73295912-73295931 Msa1075170:five_prime_UTR 25.0%
TAAGAGTGAGAGAATAGTAT+AGG + chr7_2:73292229-73292248 None:intergenic 30.0%
AGAAGAAAAAGAGGAAATAG+GGG + chr7_2:73292682-73292701 None:intergenic 30.0%
GAAGAAGAAAAAGAGGAAAT+AGG + chr7_2:73292684-73292703 None:intergenic 30.0%
CTGATAAAATGTGTATGGTA+AGG - chr7_2:73292716-73292735 Msa1075170:CDS 30.0%
!!! TCCGGGTTTTATTGTATTAT+AGG - chr7_2:73292845-73292864 Msa1075170:CDS 30.0%
TCATACTATGTTATCCTGTT+TGG - chr7_2:73292895-73292914 Msa1075170:intron 30.0%
GGAAAAAAACAAAGTACAAC+CGG + chr7_2:73293051-73293070 None:intergenic 30.0%
!!! AAGCATTTTAAAGCTAAGAC+AGG + chr7_2:73293072-73293091 None:intergenic 30.0%
!! AAAAAAGTTCTGGTTTAGGA+TGG - chr7_2:73293361-73293380 Msa1075170:intron 30.0%
GTGTTAACAAGTCAGTTATA+TGG + chr7_2:73293862-73293881 None:intergenic 30.0%
!! CAAACAAGCATGTATTTTAG+AGG - chr7_2:73294051-73294070 Msa1075170:intron 30.0%
! AAGTTTTTGACCACAAGATT+CGG - chr7_2:73294101-73294120 Msa1075170:intron 30.0%
AAAACGACATAAACTACACT+TGG + chr7_2:73294214-73294233 None:intergenic 30.0%
!!! AGTGTAGTTTATGTCGTTTT+AGG - chr7_2:73294214-73294233 Msa1075170:intron 30.0%
!!! TTTATGTCGTTTTAGGCTTA+TGG - chr7_2:73294221-73294240 Msa1075170:intron 30.0%
! TAGGATACAATTTTCAACCT+TGG + chr7_2:73294252-73294271 None:intergenic 30.0%
!! AGAGGTGTACTATTTTACTT+AGG + chr7_2:73294271-73294290 None:intergenic 30.0%
CTTAACTTACTACATATCAG+AGG + chr7_2:73294289-73294308 None:intergenic 30.0%
CTCTGATATGTAGTAAGTTA+AGG - chr7_2:73294287-73294306 Msa1075170:intron 30.0%
AATCTAATTCTCAGCGTTTA+TGG - chr7_2:73294430-73294449 Msa1075170:intron 30.0%
! AACATAAGAATGTTGGTTGT+TGG + chr7_2:73294518-73294537 None:intergenic 30.0%
TGCCTAAAACATAAGAATGT+TGG + chr7_2:73294525-73294544 None:intergenic 30.0%
!!! CAGCCCTTATGTTATTTTTT+AGG - chr7_2:73294543-73294562 Msa1075170:intron 30.0%
CCTGCCTAAAAAATAACATA+AGG + chr7_2:73294550-73294569 None:intergenic 30.0%
!!! CCTTATGTTATTTTTTAGGC+AGG - chr7_2:73294547-73294566 Msa1075170:intron 30.0%
!!! TATGTTATTTTTTAGGCAGG+CGG - chr7_2:73294550-73294569 Msa1075170:intron 30.0%
AAACTAAAGGAAAGATCAGT+AGG - chr7_2:73294606-73294625 Msa1075170:intron 30.0%
!!! TATTTTGAGACTAGACTGAT+TGG - chr7_2:73294634-73294653 Msa1075170:intron 30.0%
!!! ATTTTGAGACTAGACTGATT+GGG - chr7_2:73294635-73294654 Msa1075170:intron 30.0%
GAATCTCAAATTTCTTCGAT+AGG - chr7_2:73294697-73294716 Msa1075170:intron 30.0%
GAACAAAAACTGAAAGTAGA+GGG + chr7_2:73295043-73295062 None:intergenic 30.0%
TGAACAAAAACTGAAAGTAG+AGG + chr7_2:73295044-73295063 None:intergenic 30.0%
! GAATTTCTCAGACTAAGTTT+TGG + chr7_2:73295189-73295208 None:intergenic 30.0%
TCTTCTGTCAAATCAAACAT+GGG - chr7_2:73295386-73295405 Msa1075170:CDS 30.0%
! ATTGTTTGAAACTTGATGCA+TGG + chr7_2:73295508-73295527 None:intergenic 30.0%
TCAAGTTTCAAACAATTACG+AGG - chr7_2:73295512-73295531 Msa1075170:CDS 30.0%
TTTGTTTAAACTGTTTGGCA+AGG - chr7_2:73295786-73295805 Msa1075170:five_prime_UTR 30.0%
!! ATGATAGTGGAAAAGTGAAG+TGG + chr7_2:73292135-73292154 None:intergenic 35.0%
AAGAAGAGAGTGAATGATAG+TGG + chr7_2:73292148-73292167 None:intergenic 35.0%
TGAGAGAATAGTATAGGTGA+GGG + chr7_2:73292223-73292242 None:intergenic 35.0%
!! TCTTCTTCTGGTTCAAAGAA+AGG - chr7_2:73292463-73292482 Msa1075170:CDS 35.0%
GAGGAAATAGGGGTTAAAAA+GGG + chr7_2:73292672-73292691 None:intergenic 35.0%
AGAGGAAATAGGGGTTAAAA+AGG + chr7_2:73292673-73292692 None:intergenic 35.0%
ATGTGTATGGTAAGGACATT+AGG - chr7_2:73292724-73292743 Msa1075170:CDS 35.0%
TGTGTATGGTAAGGACATTA+GGG - chr7_2:73292725-73292744 Msa1075170:CDS 35.0%
ACTATGTTATCCTGTTTGGT+CGG - chr7_2:73292899-73292918 Msa1075170:intron 35.0%
TATAATTGAACCGACCAAAC+AGG + chr7_2:73292912-73292931 None:intergenic 35.0%
TCTTGTACTTCAGTTGTGTT+AGG - chr7_2:73293164-73293183 Msa1075170:intron 35.0%
!!! ATACTTTGGTGTTTTGAGTC+TGG - chr7_2:73293260-73293279 Msa1075170:intron 35.0%
TAGACTCCTACATACCTAAA+CGG + chr7_2:73293289-73293308 None:intergenic 35.0%
! GTGTGAGATTTTGTTCCTTT+TGG - chr7_2:73293420-73293439 Msa1075170:intron 35.0%
AAAGGAAGTTCTTGAGCTAA+TGG - chr7_2:73293479-73293498 Msa1075170:intron 35.0%
AAGGAAGTTCTTGAGCTAAT+GGG - chr7_2:73293480-73293499 Msa1075170:intron 35.0%
AGCTAATGGGGAAATGAAAA+AGG - chr7_2:73293493-73293512 Msa1075170:intron 35.0%
AAATGAACCTAGGGTTCTTA+AGG - chr7_2:73293646-73293665 Msa1075170:intron 35.0%
ATTAGTACTATTGGTGTAGC+TGG - chr7_2:73293892-73293911 Msa1075170:intron 35.0%
CAAAATGAAAGCAAAAGACC+TGG + chr7_2:73293933-73293952 None:intergenic 35.0%
! GTACTTACCTTTTCTTGACT+CGG - chr7_2:73293997-73294016 Msa1075170:intron 35.0%
!! ACAAGCATGTATTTTAGAGG+TGG - chr7_2:73294054-73294073 Msa1075170:intron 35.0%
ACGACTACGACTATCATAAT+TGG - chr7_2:73294077-73294096 Msa1075170:intron 35.0%
CGTTCTGTTTAGTGTATATG+TGG - chr7_2:73294138-73294157 Msa1075170:intron 35.0%
TAGGCTGCAGTTATGTTATT+AGG - chr7_2:73294485-73294504 Msa1075170:intron 35.0%
ATTCTTGAGCAATGGTAACA+TGG + chr7_2:73294800-73294819 None:intergenic 35.0%
ATCAAGGAAAAAGAAGTTGC+CGG - chr7_2:73294890-73294909 Msa1075170:intron 35.0%
AAAAACAGATGAAGAAAGCC+TGG + chr7_2:73294986-73295005 None:intergenic 35.0%
! AGGCTTTCTTCATCTGTTTT+TGG - chr7_2:73294985-73295004 Msa1075170:intron 35.0%
CTCTTCTGTCAAATCAAACA+TGG - chr7_2:73295385-73295404 Msa1075170:CDS 35.0%
CTTCTGTCAAATCAAACATG+GGG - chr7_2:73295387-73295406 Msa1075170:CDS 35.0%
ATGTTATTCAATCCAGGACT+TGG + chr7_2:73295429-73295448 None:intergenic 35.0%
TTCAGCATGTTATTCAATCC+AGG + chr7_2:73295435-73295454 None:intergenic 35.0%
ATATGGATGTAGAACATTCC+AGG - chr7_2:73295628-73295647 Msa1075170:CDS 35.0%
TATGGATGTAGAACATTCCA+GGG - chr7_2:73295629-73295648 Msa1075170:CDS 35.0%
TGACCATTGAGAAGATTCAT+AGG + chr7_2:73295655-73295674 None:intergenic 35.0%
TAATGCACTTGTTTGCTTTC+AGG - chr7_2:73295678-73295697 Msa1075170:CDS 35.0%
AGGAAAATGAGAAGTGAACT+AGG - chr7_2:73295735-73295754 Msa1075170:five_prime_UTR 35.0%
GGAAAATGAGAAGTGAACTA+GGG - chr7_2:73295736-73295755 Msa1075170:five_prime_UTR 35.0%
TTTAAACTGTTTGGCAAGGT+GGG - chr7_2:73295790-73295809 Msa1075170:five_prime_UTR 35.0%
AAAGTTCCACAAATGAAGCA+AGG + chr7_2:73295816-73295835 None:intergenic 35.0%
TTTAATGATCGCTAAGTGAG+AGG - chr7_2:73295846-73295865 Msa1075170:five_prime_UTR 35.0%
TTAATGATCGCTAAGTGAGA+GGG - chr7_2:73295847-73295866 Msa1075170:five_prime_UTR 35.0%
AGTGAAGTGGAAGACAAAAG+AGG + chr7_2:73292122-73292141 None:intergenic 40.0%
AGAGAATAGTATAGGTGAGG+GGG + chr7_2:73292221-73292240 None:intergenic 40.0%
GAGAGAATAGTATAGGTGAG+GGG + chr7_2:73292222-73292241 None:intergenic 40.0%
GTGAGAGAATAGTATAGGTG+AGG + chr7_2:73292224-73292243 None:intergenic 40.0%
GGTTGCTAGATTGTGTTCAT+TGG + chr7_2:73292286-73292305 None:intergenic 40.0%
AGAAGAAGAACTAGCAGCAA+TGG + chr7_2:73292446-73292465 None:intergenic 40.0%
! GCTAGTTCTTCTTCTTCTTC+TGG - chr7_2:73292451-73292470 Msa1075170:CDS 40.0%
! TCTGGTTCAAAGAAAGGAAG+AGG - chr7_2:73292469-73292488 Msa1075170:CDS 40.0%
GTTCAAAGAAAGGAAGAGGT+GGG - chr7_2:73292473-73292492 Msa1075170:CDS 40.0%
TTCAACATTCTCAACCACCT+CGG - chr7_2:73292500-73292519 Msa1075170:CDS 40.0%
GACCAGAAACAGTAACAGTA+GGG + chr7_2:73292612-73292631 None:intergenic 40.0%
AGACCAGAAACAGTAACAGT+AGG + chr7_2:73292613-73292632 None:intergenic 40.0%
!! CTGTTTCTGGTCTACAACAA+AGG - chr7_2:73292620-73292639 Msa1075170:CDS 40.0%
!! GGTTTTGTCAACAATGTAGC+AGG - chr7_2:73292641-73292660 Msa1075170:CDS 40.0%
!! GATTTGGGTTGATTGTGTTC+CGG - chr7_2:73293029-73293048 Msa1075170:intron 40.0%
CAGTGACGCATTGTATATTC+TGG + chr7_2:73293235-73293254 None:intergenic 40.0%
AGACTCCTACATACCTAAAC+GGG + chr7_2:73293288-73293307 None:intergenic 40.0%
GGTATGTAGGAGTCTAGAAA+AGG - chr7_2:73293293-73293312 Msa1075170:intron 40.0%
TTGATTTATCTGGTCTGCCA+TGG - chr7_2:73293330-73293349 Msa1075170:intron 40.0%
GAACACTAAAGAGGACCAAA+AGG + chr7_2:73293438-73293457 None:intergenic 40.0%
TGATACCAGGAACACTAAAG+AGG + chr7_2:73293447-73293466 None:intergenic 40.0%
TTAGTGTTCCTGGTATCATG+TGG - chr7_2:73293449-73293468 Msa1075170:intron 40.0%
GTATCATGTGGCACTTGTAA+AGG - chr7_2:73293461-73293480 Msa1075170:intron 40.0%
AGGAAGTTCTTGAGCTAATG+GGG - chr7_2:73293481-73293500 Msa1075170:intron 40.0%
TGCTAATGAGAGTTTGAGAG+TGG - chr7_2:73293698-73293717 Msa1075170:intron 40.0%
TATGGTACGCACACTAACAT+GGG + chr7_2:73293844-73293863 None:intergenic 40.0%
ATATGGTACGCACACTAACA+TGG + chr7_2:73293845-73293864 None:intergenic 40.0%
GAAAGCAAAAGACCTGGATT+GGG + chr7_2:73293927-73293946 None:intergenic 40.0%
TGAAAGCAAAAGACCTGGAT+TGG + chr7_2:73293928-73293947 None:intergenic 40.0%
!!! TTACCTTTTCTTGACTCGGT+AGG - chr7_2:73294001-73294020 Msa1075170:intron 40.0%
TATCCTACCGAGTCAAGAAA+AGG + chr7_2:73294007-73294026 None:intergenic 40.0%
TTTCCAAGAATCTGTGAGCT+TGG + chr7_2:73294666-73294685 None:intergenic 40.0%
AAGCTCACAGATTCTTGGAA+AGG - chr7_2:73294665-73294684 Msa1075170:intron 40.0%
GACGAACAATTCTTGAGCAA+TGG + chr7_2:73294808-73294827 None:intergenic 40.0%
TCAGCAAGCTGATGAAATCT+GGG + chr7_2:73294865-73294884 None:intergenic 40.0%
! TACTTGGCACTTTTATCGAC+AGG - chr7_2:73295117-73295136 Msa1075170:intron 40.0%
ATTGTTGTGGTCTGATTTCC+GGG + chr7_2:73295222-73295241 None:intergenic 40.0%
GATTGTTGTGGTCTGATTTC+CGG + chr7_2:73295223-73295242 None:intergenic 40.0%
GGAAATCAGACCACAACAAT+CGG - chr7_2:73295222-73295241 Msa1075170:intron 40.0%
TGCAAGAAAAGGTTGTCAGA+TGG + chr7_2:73295276-73295295 None:intergenic 40.0%
! TCTGACAACCTTTTCTTGCA+AGG - chr7_2:73295276-73295295 Msa1075170:intron 40.0%
! CAACCTTTTCTTGCAAGGTT+TGG - chr7_2:73295281-73295300 Msa1075170:intron 40.0%
CTACCAAACCTTGCAAGAAA+AGG + chr7_2:73295287-73295306 None:intergenic 40.0%
!! CTTTTCTTGCAAGGTTTGGT+AGG - chr7_2:73295285-73295304 Msa1075170:intron 40.0%
AGATGTAGGAAGTTGTGTCA+TGG + chr7_2:73295472-73295491 None:intergenic 40.0%
CAACTTCCTACATCTTCTCA+TGG - chr7_2:73295477-73295496 Msa1075170:CDS 40.0%
GTTTAAACTGTTTGGCAAGG+TGG - chr7_2:73295789-73295808 Msa1075170:five_prime_UTR 40.0%
AGAGATAACAAACCACGAAG+TGG + chr7_2:73295876-73295895 None:intergenic 40.0%
ACAAAAGAGGAAGAGGTGGA+AGG + chr7_2:73292109-73292128 None:intergenic 45.0%
GAAGACAAAAGAGGAAGAGG+TGG + chr7_2:73292113-73292132 None:intergenic 45.0%
GTGGAAGACAAAAGAGGAAG+AGG + chr7_2:73292116-73292135 None:intergenic 45.0%
! GGAGTGGTGGTTGTTATTGT+TGG + chr7_2:73292192-73292211 None:intergenic 45.0%
GAGAATAGTATAGGTGAGGG+GGG + chr7_2:73292220-73292239 None:intergenic 45.0%
GAATCCATTGGTGTGAGGTT+TGG + chr7_2:73292313-73292332 None:intergenic 45.0%
! AACCTCACACCAATGGATTC+AGG - chr7_2:73292313-73292332 Msa1075170:three_prime_UTR 45.0%
TTCAGGAGGCAACTCTTCTT+CGG - chr7_2:73292330-73292349 Msa1075170:three_prime_UTR 45.0%
TCGGAAGAGTCCTCTCTTAA+TGG - chr7_2:73292349-73292368 Msa1075170:exon 45.0%
AGAAGAACTAGCAGCAATGG+TGG + chr7_2:73292443-73292462 None:intergenic 45.0%
GGTTCAAAGAAAGGAAGAGG+TGG - chr7_2:73292472-73292491 Msa1075170:CDS 45.0%
TGCCCTACTGTTACTGTTTC+TGG - chr7_2:73292607-73292626 Msa1075170:CDS 45.0%
GCGTCACTGAGCATATACTT+TGG - chr7_2:73293246-73293265 Msa1075170:intron 45.0%
GACTCCTACATACCTAAACG+GGG + chr7_2:73293287-73293306 None:intergenic 45.0%
TTGGTCCTCTTTAGTGTTCC+TGG - chr7_2:73293439-73293458 Msa1075170:intron 45.0%
TACAAGTGCCACATGATACC+AGG + chr7_2:73293460-73293479 None:intergenic 45.0%
ATGCAGACCTTAAGAACCCT+AGG + chr7_2:73293656-73293675 None:intergenic 45.0%
TCATGCTATCGTGTGGTCAT+TGG - chr7_2:73293726-73293745 Msa1075170:intron 45.0%
CTCGGTAGGATAGTGTTCAA+TGG - chr7_2:73294015-73294034 Msa1075170:intron 45.0%
ACCACAAGATTCGGAGAACA+TGG - chr7_2:73294110-73294129 Msa1075170:intron 45.0%
ACCATGTTCTCCGAATCTTG+TGG + chr7_2:73294114-73294133 None:intergenic 45.0%
GTGTAGCTGCAATAGCTTTC+CGG - chr7_2:73294180-73294199 Msa1075170:intron 45.0%
ACTACACTTGGAACAAGCAC+CGG + chr7_2:73294202-73294221 None:intergenic 45.0%
TTAGGCTTATGGCTCATCCA+AGG - chr7_2:73294232-73294251 Msa1075170:intron 45.0%
AGACCAAGCTCACAGATTCT+TGG - chr7_2:73294660-73294679 Msa1075170:intron 45.0%
GCTCAAGAATTGTTCGTCTC+TGG - chr7_2:73294810-73294829 Msa1075170:intron 45.0%
ATGAAATCTGGGCAAGGTTG+TGG + chr7_2:73294854-73294873 None:intergenic 45.0%
AAGCTGATGAAATCTGGGCA+AGG + chr7_2:73294860-73294879 None:intergenic 45.0%
CTCAGCAAGCTGATGAAATC+TGG + chr7_2:73294866-73294885 None:intergenic 45.0%
!! CAGCTTGCTGAGTTTGATCA+AGG - chr7_2:73294874-73294893 Msa1075170:intron 45.0%
! TCTTAACCTCACGTTTTGCC+AGG - chr7_2:73294965-73294984 Msa1075170:intron 45.0%
AGAAATTCACTTCCACCACC+CGG - chr7_2:73295201-73295220 Msa1075170:intron 45.0%
ATCAGACCACAACAATCGGT+TGG - chr7_2:73295226-73295245 Msa1075170:intron 45.0%
! TTCTTGCAAGGTTTGGTAGG+TGG - chr7_2:73295288-73295307 Msa1075170:intron 45.0%
! TCTTGCAAGGTTTGGTAGGT+GGG - chr7_2:73295289-73295308 Msa1075170:intron 45.0%
ACTCCAGTGTAAGTTTCCTC+GGG + chr7_2:73295342-73295361 None:intergenic 45.0%
GACTCCAGTGTAAGTTTCCT+CGG + chr7_2:73295343-73295362 None:intergenic 45.0%
TCCTACATCTTCTCATGGTG+TGG - chr7_2:73295482-73295501 Msa1075170:CDS 45.0%
TTGAGAAGATTCATAGGCCC+TGG + chr7_2:73295649-73295668 None:intergenic 45.0%
GGGCCTATGAATCTTCTCAA+TGG - chr7_2:73295649-73295668 Msa1075170:CDS 45.0%
!! TATTATATTATATTAATGTT+AGG - chr7_2:73294466-73294485 Msa1075170:intron 5.0%
!! ATTGGTGTGAGGTTTGGTGG+TGG + chr7_2:73292307-73292326 None:intergenic 50.0%
ACCACCAAACCTCACACCAA+TGG - chr7_2:73292306-73292325 Msa1075170:three_prime_UTR 50.0%
TCCATTGGTGTGAGGTTTGG+TGG + chr7_2:73292310-73292329 None:intergenic 50.0%
CTCCTGAATCCATTGGTGTG+AGG + chr7_2:73292318-73292337 None:intergenic 50.0%
! CTCACACCAATGGATTCAGG+AGG - chr7_2:73292316-73292335 Msa1075170:three_prime_UTR 50.0%
GAGTTGCCTCCTGAATCCAT+TGG + chr7_2:73292325-73292344 None:intergenic 50.0%
CATCCTTCAACTTGACACCG+AGG + chr7_2:73292520-73292539 None:intergenic 50.0%
TTTGAGTCTGGTCCCCGTTT+AGG - chr7_2:73293272-73293291 Msa1075170:intron 50.0%
TGGTCCCCGTTTAGGTATGT+AGG - chr7_2:73293280-73293299 Msa1075170:intron 50.0%
GTACGCACACTAACATGGGT+TGG + chr7_2:73293840-73293859 None:intergenic 50.0%
TGGATAGTGCAACCCAATCC+AGG - chr7_2:73293912-73293931 Msa1075170:intron 50.0%
TATGACCAGCTAGTCGTCTC+CGG + chr7_2:73294912-73294931 None:intergenic 50.0%
AGGTTAAGAGAGAGCTGGGT+GGG + chr7_2:73294954-73294973 None:intergenic 50.0%
CGTGAGGTTAAGAGAGAGCT+GGG + chr7_2:73294958-73294977 None:intergenic 50.0%
ACGTGAGGTTAAGAGAGAGC+TGG + chr7_2:73294959-73294978 None:intergenic 50.0%
AGAAAGCCTGGCAAAACGTG+AGG + chr7_2:73294974-73294993 None:intergenic 50.0%
TCGACAGGTAACAGTGACAG+AGG - chr7_2:73295132-73295151 Msa1075170:intron 50.0%
ACAGGTAACAGTGACAGAGG+TGG - chr7_2:73295135-73295154 Msa1075170:intron 50.0%
GCCACACCATGAGAAGATGT+AGG + chr7_2:73295486-73295505 None:intergenic 50.0%
GGTCACATTTCACAGCCTCT+CGG - chr7_2:73295555-73295574 Msa1075170:CDS 50.0%
!! GCAGGGAAGGAGGCATTATA+TGG - chr7_2:73295611-73295630 Msa1075170:CDS 50.0%
AGTATAGGTGAGGGGGGTCT+GGG + chr7_2:73292214-73292233 None:intergenic 55.0%
TAGTATAGGTGAGGGGGGTC+TGG + chr7_2:73292215-73292234 None:intergenic 55.0%
CCTTCAACTTGACACCGAGG+TGG + chr7_2:73292517-73292536 None:intergenic 55.0%
!! CCACCTCGGTGTCAAGTTGA+AGG - chr7_2:73292514-73292533 Msa1075170:CDS 55.0%
GGCTGCATCATGCTATCGTG+TGG - chr7_2:73293719-73293738 Msa1075170:intron 55.0%
GTTAAGAGAGAGCTGGGTGG+GGG + chr7_2:73294952-73294971 None:intergenic 55.0%
GGTTAAGAGAGAGCTGGGTG+GGG + chr7_2:73294953-73294972 None:intergenic 55.0%
GAGGTTAAGAGAGAGCTGGG+TGG + chr7_2:73294955-73294974 None:intergenic 55.0%
CAGAGGTGGCAGCTTCTTGA+TGG - chr7_2:73295149-73295168 Msa1075170:intron 55.0%
GTTGTGGTCTGATTTCCGGG+TGG + chr7_2:73295219-73295238 None:intergenic 55.0%
CCAAGGCCAACCGATTGTTG+TGG + chr7_2:73295235-73295254 None:intergenic 55.0%
!! CCACAACAATCGGTTGGCCT+TGG - chr7_2:73295232-73295251 Msa1075170:intron 55.0%
!! AACAATCGGTTGGCCTTGGC+CGG - chr7_2:73295236-73295255 Msa1075170:intron 55.0%
AGTTTCCTCGGGAGGATGTC+TGG + chr7_2:73295331-73295350 None:intergenic 55.0%
CCAGTGTAAGTTTCCTCGGG+AGG + chr7_2:73295339-73295358 None:intergenic 55.0%
CCTCCCGAGGAAACTTACAC+TGG - chr7_2:73295336-73295355 Msa1075170:intron 55.0%
CGAAACGCAGAACCAAGTCC+TGG - chr7_2:73295414-73295433 Msa1075170:CDS 55.0%
TACGAGGTTTCCCCCGATCT+TGG - chr7_2:73295528-73295547 Msa1075170:CDS 55.0%
AATGTGACCCCGGCCAAGAT+CGG + chr7_2:73295544-73295563 None:intergenic 55.0%
GAGGCTGTGAAATGTGACCC+CGG + chr7_2:73295554-73295573 None:intergenic 55.0%
GATCAAGCTCGCCAGAGAGT+TGG + chr7_2:73295584-73295603 None:intergenic 55.0%
GAGCTTGATCTGTCGCAGCA+GGG - chr7_2:73295594-73295613 Msa1075170:CDS 55.0%
TTGATCTGTCGCAGCAGGGA+AGG - chr7_2:73295598-73295617 Msa1075170:CDS 55.0%
GGTGGGCCTTGCTTCATTTG+TGG - chr7_2:73295807-73295826 Msa1075170:five_prime_UTR 55.0%
GTATAGGTGAGGGGGGTCTG+GGG + chr7_2:73292213-73292232 None:intergenic 60.0%
AGTTGCCGGAGACGACTAGC+TGG - chr7_2:73294904-73294923 Msa1075170:intron 60.0%
GTGGTCTGATTTCCGGGTGG+TGG + chr7_2:73295216-73295235 None:intergenic 60.0%
!! ACAATCGGTTGGCCTTGGCC+GGG - chr7_2:73295237-73295256 Msa1075170:intron 60.0%
GTAGGTGGGACAAGCTTCCC+TGG - chr7_2:73295303-73295322 Msa1075170:intron 60.0%
AGGTTTCCCCCGATCTTGGC+CGG - chr7_2:73295532-73295551 Msa1075170:CDS 60.0%
ATGTGACCCCGGCCAAGATC+GGG + chr7_2:73295543-73295562 None:intergenic 60.0%
CCAGAGAGTTGGCTACCGAG+AGG + chr7_2:73295573-73295592 None:intergenic 60.0%
CCTCTCGGTAGCCAACTCTC+TGG - chr7_2:73295570-73295589 Msa1075170:CDS 60.0%
CGAGCTTGATCTGTCGCAGC+AGG - chr7_2:73295593-73295612 Msa1075170:CDS 60.0%
ATCTGTCGCAGCAGGGAAGG+AGG - chr7_2:73295601-73295620 Msa1075170:CDS 60.0%
!! GTGAGAGGGCATCCACTTCG+TGG - chr7_2:73295861-73295880 Msa1075170:five_prime_UTR 60.0%
!! CAATCGGTTGGCCTTGGCCG+GGG - chr7_2:73295238-73295257 Msa1075170:intron 65.0%
!! TTGGCCTTGGCCGGGGAACA+CGG - chr7_2:73295245-73295264 Msa1075170:intron 65.0%
GATGGCGACTCCGTGTTCCC+CGG + chr7_2:73295258-73295277 None:intergenic 65.0%
CGGGAGGATGTCTGGCACCA+GGG + chr7_2:73295323-73295342 None:intergenic 65.0%
TCGGGAGGATGTCTGGCACC+AGG + chr7_2:73295324-73295343 None:intergenic 65.0%
! TGGTGCCAGACATCCTCCCG+AGG - chr7_2:73295323-73295342 Msa1075170:intron 65.0%
GGTTTCCCCCGATCTTGGCC+GGG - chr7_2:73295533-73295552 Msa1075170:CDS 65.0%
GTTTCCCCCGATCTTGGCCG+GGG - chr7_2:73295534-73295553 Msa1075170:CDS 65.0%
TGTGACCCCGGCCAAGATCG+GGG + chr7_2:73295542-73295561 None:intergenic 65.0%
GACTCCGTGTTCCCCGGCCA+AGG + chr7_2:73295252-73295271 None:intergenic 70.0%
GTGACCCCGGCCAAGATCGG+GGG + chr7_2:73295541-73295560 None:intergenic 70.0%
GAGGGGGGTCTGGGGAGTGG+TGG + chr7_2:73292205-73292224 None:intergenic 75.0%
GGTGAGGGGGGTCTGGGGAG+TGG + chr7_2:73292208-73292227 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 73292089 73295950 73292089 ID=Msa1075170;Name=Msa1075170
chr7_2 mRNA 73292089 73295950 73292089 ID=Msa1075170-mRNA-1;Parent=Msa1075170;Name=Msa1075170-mRNA-1;_AED=0.05;_eAED=0.05;_QI=236|1|1|1|0.5|0.66|3|270|339
chr7_2 exon 73292089 73292900 73292089 ID=Msa1075170-mRNA-1:exon:17049;Parent=Msa1075170-mRNA-1
chr7_2 exon 73293033 73293172 73293033 ID=Msa1075170-mRNA-1:exon:17048;Parent=Msa1075170-mRNA-1
chr7_2 exon 73295377 73295950 73295377 ID=Msa1075170-mRNA-1:exon:17047;Parent=Msa1075170-mRNA-1
chr7_2 five_prime_UTR 73295715 73295950 73295715 ID=Msa1075170-mRNA-1:five_prime_utr;Parent=Msa1075170-mRNA-1
chr7_2 CDS 73295377 73295714 73295377 ID=Msa1075170-mRNA-1:cds;Parent=Msa1075170-mRNA-1
chr7_2 CDS 73293033 73293172 73293033 ID=Msa1075170-mRNA-1:cds;Parent=Msa1075170-mRNA-1
chr7_2 CDS 73292359 73292900 73292359 ID=Msa1075170-mRNA-1:cds;Parent=Msa1075170-mRNA-1
chr7_2 three_prime_UTR 73292089 73292358 73292089 ID=Msa1075170-mRNA-1:three_prime_utr;Parent=Msa1075170-mRNA-1
Gene Sequence

>Msa1075170

ATGGATTCAGGAGGCAACTCTTCTTCGGAAGAGTCCTCTCTTAATGGCTTAAAATTTGGCCAACGAATCTATTTTGAAGATACAGCTCTTGCTACTGCTGCTGCTGCTACTTCTACCACCATTGCTGCTAGTTCTTCTTCTTCTTCTGGTTCAAAGAAAGGAAGAGGTGGGTCAGTTCAACATTCTCAACCACCTCGGTGTCAAGTTGAAGGATGTAAACTAGATCTGACTGATGCTAAAGCTTACTATTCTAGACACAAAGTTTGTAGCATGCACTCTAAGTGCCCTACTGTTACTGTTTCTGGTCTACAACAAAGGTTTTGTCAACAATGTAGCAGATTTCATCAGCTTGCTGAGTTTGATCAAGGAAAAAGAAGTTGCCGGAGACGACTAGCTGGTCATAACGAGCGTCGCAGAAAGCCCCCACCCAGCTCTCTCTTAACCTCACGTTTTGCCAGGCTTTCTTCATCTGTTTTTGGTAACAGTGACAGAGGTGGCAGCTTCTTGATGGAATTTGCTTCAAACCCAAAACTTAGTCTGAGAAATTCACTTCCACCACCCGGAAATCAGACCACAACAATCGGTTGGCCTTGGCCGGGGAACACGGAGTCGCCATCTGACAACCTTTTCTTGCAAGGTTTGGTAGGTGGGACAAGCTTCCCTGGTGCCAGACATCCTCCCGAGGAAACTTACACTGGAGTCACAGATTCAAACTGTGCTCTCTCTCTTCTGTCAAATCAAACATGGGGTTCTCGAAACGCAGAACCAAGTCCTGGATTGAATAACATGCTGAATTTCAATGGGACATCCATGACACAACTTCCTACATCTTCTCATGGTGTGGCCATGCATCAAGTTTCAAACAATTACGAGGTTTCCCCCGATCTTGGCCGGGGTCACATTTCACAGCCTCTCGGTAGCCAACTCTCTGGCGAGCTTGATCTGTCGCAGCAGGGAAGGAGGCATTATATGGATGTAGAACATTCCAGGGCCTATGAATCTTCTCAATGGTCACTGTAA
Protein sequence

>Msa1075170

MDSGGNSSSEESSLNGLKFGQRIYFEDTALATAAAATSTTIAASSSSSSGSKKGRGGSVQHSQPPRCQVEGCKLDLTDAKAYYSRHKVCSMHSKCPTVTVSGLQQRFCQQCSRFHQLAEFDQGKRSCRRRLAGHNERRRKPPPSSLLTSRFARLSSSVFGNSDRGGSFLMEFASNPKLSLRNSLPPPGNQTTTIGWPWPGNTESPSDNLFLQGLVGGTSFPGARHPPEETYTGVTDSNCALSLLSNQTWGSRNAEPSPGLNNMLNFNGTSMTQLPTSSHGVAMHQVSNNYEVSPDLGRGHISQPLGSQLSGELDLSQQGRRHYMDVEHSRAYESSQWSL*