Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078100 | GAU40839.1 | 61.870 | 813 | 209 | 9 | 7 | 734 | 29 | 825 | 0.0 | 1011 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078100 | sp|Q6NQJ7|FRS4_ARATH | 37.228 | 505 | 277 | 10 | 48 | 525 | 3 | 494 | 6.97e-102 | 333 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078100 | A0A2Z6P9Q3 | 61.870 | 813 | 209 | 9 | 7 | 734 | 29 | 825 | 0.0 | 1011 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1078100 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078100 | MtrunA17_Chr2g0296781 | 65.406 | 714 | 163 | 7 | 48 | 678 | 3 | 715 | 0.0 | 931 |
| Msa1078100 | MtrunA17_Chr6g0477261 | 62.751 | 647 | 147 | 7 | 157 | 710 | 1 | 646 | 0.0 | 801 |
| Msa1078100 | MtrunA17_Chr1g0196541 | 53.966 | 769 | 238 | 10 | 48 | 740 | 3 | 731 | 0.0 | 800 |
| Msa1078100 | MtrunA17_Chr5g0441581 | 40.816 | 686 | 313 | 12 | 28 | 632 | 15 | 688 | 1.38e-164 | 493 |
| Msa1078100 | MtrunA17_Chr2g0329031 | 37.126 | 501 | 283 | 10 | 48 | 525 | 20 | 511 | 1.14e-107 | 346 |
| Msa1078100 | MtrunA17_Chr3g0080351 | 35.830 | 494 | 299 | 3 | 41 | 516 | 75 | 568 | 1.34e-103 | 338 |
| Msa1078100 | MtrunA17_Chr1g0207551 | 36.056 | 502 | 295 | 5 | 39 | 514 | 31 | 532 | 8.74e-102 | 332 |
| Msa1078100 | MtrunA17_Chr2g0291581 | 37.983 | 466 | 272 | 5 | 42 | 492 | 71 | 534 | 7.74e-99 | 321 |
| Msa1078100 | MtrunA17_Chr5g0448761 | 37.014 | 489 | 269 | 11 | 39 | 490 | 57 | 543 | 1.08e-96 | 318 |
| Msa1078100 | MtrunA17_Chr1g0202341 | 35.340 | 515 | 288 | 10 | 41 | 517 | 50 | 557 | 3.84e-96 | 314 |
| Msa1078100 | MtrunA17_Chr2g0291591 | 34.263 | 502 | 300 | 5 | 18 | 492 | 39 | 537 | 2.97e-95 | 308 |
| Msa1078100 | MtrunA17_Chr5g0440451 | 33.269 | 517 | 278 | 14 | 41 | 508 | 42 | 540 | 4.47e-75 | 262 |
| Msa1078100 | MtrunA17_Chr5g0448511 | 37.975 | 316 | 194 | 2 | 176 | 490 | 1 | 315 | 5.01e-74 | 251 |
| Msa1078100 | MtrunA17_Chr8g0363841 | 31.579 | 513 | 299 | 9 | 38 | 514 | 10 | 506 | 1.14e-73 | 253 |
| Msa1078100 | MtrunA17_Chr3g0118611 | 39.748 | 317 | 187 | 3 | 183 | 497 | 113 | 427 | 8.99e-70 | 244 |
| Msa1078100 | MtrunA17_Chr2g0287061 | 33.087 | 541 | 310 | 15 | 2 | 522 | 141 | 649 | 5.94e-68 | 240 |
| Msa1078100 | MtrunA17_Chr2g0287651 | 29.350 | 477 | 288 | 9 | 48 | 486 | 81 | 546 | 1.96e-62 | 226 |
| Msa1078100 | MtrunA17_Chr2g0324011 | 28.926 | 484 | 299 | 10 | 39 | 485 | 7 | 482 | 1.12e-60 | 216 |
| Msa1078100 | MtrunA17_Chr3g0082121 | 32.179 | 491 | 279 | 17 | 1 | 453 | 1 | 475 | 5.08e-60 | 216 |
| Msa1078100 | MtrunA17_Chr1g0198761 | 29.240 | 513 | 300 | 13 | 45 | 508 | 50 | 548 | 1.80e-58 | 213 |
| Msa1078100 | MtrunA17_Chr1g0203051 | 29.211 | 469 | 291 | 11 | 48 | 483 | 85 | 545 | 3.28e-57 | 207 |
| Msa1078100 | MtrunA17_Chr1g0203721 | 29.289 | 478 | 293 | 11 | 44 | 483 | 65 | 535 | 3.81e-56 | 207 |
| Msa1078100 | MtrunA17_Chr6g0458391 | 28.008 | 482 | 326 | 11 | 26 | 490 | 207 | 684 | 5.29e-55 | 202 |
| Msa1078100 | MtrunA17_Chr2g0276841 | 25.912 | 521 | 318 | 12 | 42 | 506 | 70 | 578 | 3.89e-54 | 199 |
| Msa1078100 | MtrunA17_Chr5g0431001 | 29.759 | 457 | 258 | 14 | 24 | 424 | 33 | 482 | 2.35e-51 | 187 |
| Msa1078100 | MtrunA17_Chr6g0476441 | 45.607 | 239 | 87 | 5 | 521 | 717 | 52 | 289 | 1.52e-47 | 171 |
| Msa1078100 | MtrunA17_Chr2g0294841 | 27.083 | 432 | 274 | 8 | 42 | 434 | 45 | 474 | 3.21e-47 | 180 |
| Msa1078100 | MtrunA17_Chr1g0164591 | 34.494 | 316 | 168 | 11 | 120 | 406 | 3 | 308 | 5.40e-46 | 167 |
| Msa1078100 | MtrunA17_Chr2g0290391 | 23.748 | 539 | 346 | 14 | 29 | 513 | 42 | 569 | 1.95e-37 | 149 |
| Msa1078100 | MtrunA17_Chr7g0258861 | 29.720 | 286 | 165 | 6 | 39 | 291 | 7 | 289 | 1.40e-33 | 131 |
| Msa1078100 | MtrunA17_Chr6g0476431 | 61.628 | 86 | 33 | 0 | 48 | 133 | 3 | 88 | 9.67e-32 | 118 |
| Msa1078100 | MtrunA17_Chr6g0451441 | 33.735 | 166 | 100 | 5 | 10 | 169 | 52 | 213 | 3.63e-15 | 79.0 |
| Msa1078100 | MtrunA17_Chr3g0077731 | 46.296 | 108 | 45 | 4 | 583 | 678 | 1 | 107 | 5.38e-15 | 72.0 |
| Msa1078100 | MtrunA17_Chr2g0308841 | 34.066 | 91 | 60 | 0 | 363 | 453 | 17 | 107 | 1.26e-12 | 68.9 |
| Msa1078100 | MtrunA17_Chr1g0149131 | 29.915 | 117 | 67 | 3 | 293 | 401 | 1 | 110 | 2.65e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1078100 | AT1G76320.3 | 37.228 | 505 | 277 | 10 | 48 | 525 | 3 | 494 | 3.43e-103 | 333 |
| Msa1078100 | AT1G76320.1 | 37.228 | 505 | 277 | 10 | 48 | 525 | 3 | 494 | 7.08e-103 | 333 |
| Msa1078100 | AT1G76320.4 | 37.228 | 505 | 277 | 10 | 48 | 525 | 3 | 494 | 7.08e-103 | 333 |
| Msa1078100 | AT1G76320.2 | 37.228 | 505 | 277 | 10 | 48 | 525 | 3 | 494 | 8.50e-103 | 333 |
| Msa1078100 | AT4G15090.1 | 30.513 | 721 | 401 | 16 | 39 | 679 | 48 | 748 | 4.48e-102 | 334 |
| Msa1078100 | AT4G15090.5 | 30.513 | 721 | 401 | 16 | 39 | 679 | 48 | 748 | 4.48e-102 | 334 |
| Msa1078100 | AT4G15090.3 | 30.513 | 721 | 401 | 16 | 39 | 679 | 48 | 748 | 4.48e-102 | 334 |
| Msa1078100 | AT4G15090.2 | 30.513 | 721 | 401 | 16 | 39 | 679 | 48 | 748 | 4.48e-102 | 334 |
| Msa1078100 | AT4G15090.4 | 30.513 | 721 | 401 | 16 | 39 | 679 | 48 | 748 | 4.48e-102 | 334 |
| Msa1078100 | AT3G22170.2 | 33.399 | 506 | 314 | 5 | 41 | 527 | 69 | 570 | 1.12e-94 | 314 |
| Msa1078100 | AT3G22170.1 | 33.399 | 506 | 314 | 5 | 41 | 527 | 69 | 570 | 1.12e-94 | 314 |
| Msa1078100 | AT4G38180.1 | 35.070 | 499 | 289 | 8 | 25 | 490 | 56 | 552 | 1.00e-93 | 311 |
| Msa1078100 | AT2G32250.5 | 35.924 | 476 | 283 | 7 | 45 | 515 | 41 | 499 | 1.76e-88 | 296 |
| Msa1078100 | AT1G52520.1 | 33.719 | 519 | 305 | 10 | 9 | 492 | 37 | 551 | 1.76e-88 | 294 |
| Msa1078100 | AT2G32250.8 | 35.941 | 473 | 281 | 7 | 48 | 515 | 3 | 458 | 1.95e-88 | 296 |
| Msa1078100 | AT2G32250.7 | 35.941 | 473 | 281 | 7 | 48 | 515 | 3 | 458 | 2.45e-88 | 296 |
| Msa1078100 | AT2G32250.6 | 35.924 | 476 | 283 | 7 | 45 | 515 | 41 | 499 | 2.73e-88 | 296 |
| Msa1078100 | AT2G32250.1 | 35.924 | 476 | 283 | 7 | 45 | 515 | 41 | 499 | 2.73e-88 | 296 |
| Msa1078100 | AT2G32250.3 | 35.924 | 476 | 283 | 7 | 45 | 515 | 41 | 499 | 2.73e-88 | 296 |
| Msa1078100 | AT2G32250.2 | 35.924 | 476 | 283 | 7 | 45 | 515 | 41 | 499 | 2.79e-88 | 296 |
| Msa1078100 | AT2G32250.4 | 35.924 | 476 | 283 | 7 | 45 | 515 | 41 | 499 | 2.79e-88 | 296 |
| Msa1078100 | AT4G19990.5 | 36.752 | 468 | 265 | 10 | 45 | 493 | 24 | 479 | 1.41e-82 | 280 |
| Msa1078100 | AT4G19990.3 | 36.752 | 468 | 265 | 10 | 45 | 493 | 24 | 479 | 1.54e-82 | 280 |
| Msa1078100 | AT4G19990.4 | 36.752 | 468 | 265 | 10 | 45 | 493 | 24 | 479 | 1.54e-82 | 280 |
| Msa1078100 | AT4G19990.7 | 36.752 | 468 | 265 | 10 | 45 | 493 | 38 | 493 | 1.91e-82 | 280 |
| Msa1078100 | AT1G80010.1 | 31.343 | 536 | 326 | 10 | 42 | 540 | 95 | 625 | 2.53e-82 | 278 |
| Msa1078100 | AT4G19990.6 | 36.752 | 468 | 265 | 10 | 45 | 493 | 24 | 479 | 2.65e-82 | 280 |
| Msa1078100 | AT4G19990.2 | 36.752 | 468 | 265 | 10 | 45 | 493 | 24 | 479 | 2.65e-82 | 280 |
| Msa1078100 | AT4G19990.1 | 37.629 | 388 | 228 | 5 | 108 | 493 | 47 | 422 | 4.15e-76 | 261 |
| Msa1078100 | AT2G27110.2 | 33.399 | 509 | 293 | 11 | 23 | 508 | 30 | 515 | 2.91e-74 | 259 |
| Msa1078100 | AT2G27110.1 | 33.399 | 509 | 293 | 11 | 23 | 508 | 30 | 515 | 2.91e-74 | 259 |
| Msa1078100 | AT2G27110.3 | 38.889 | 324 | 191 | 5 | 188 | 508 | 51 | 370 | 4.56e-71 | 247 |
| Msa1078100 | AT3G06250.2 | 32.301 | 452 | 280 | 7 | 41 | 487 | 189 | 619 | 4.57e-70 | 246 |
| Msa1078100 | AT3G06250.1 | 32.301 | 452 | 280 | 7 | 41 | 487 | 189 | 619 | 4.57e-70 | 246 |
| Msa1078100 | AT3G06250.3 | 32.301 | 452 | 280 | 7 | 41 | 487 | 189 | 619 | 4.57e-70 | 246 |
| Msa1078100 | AT5G18960.2 | 31.897 | 464 | 294 | 9 | 41 | 500 | 210 | 655 | 1.76e-68 | 242 |
| Msa1078100 | AT5G18960.1 | 31.897 | 464 | 294 | 9 | 41 | 500 | 210 | 655 | 1.76e-68 | 242 |
| Msa1078100 | AT4G38170.1 | 35.202 | 321 | 202 | 3 | 190 | 508 | 19 | 335 | 5.89e-64 | 224 |
| Msa1078100 | AT1G10240.2 | 27.357 | 541 | 316 | 17 | 28 | 508 | 35 | 558 | 4.17e-54 | 199 |
| Msa1078100 | AT1G10240.1 | 27.357 | 541 | 316 | 17 | 28 | 508 | 35 | 558 | 4.17e-54 | 199 |
| Msa1078100 | AT5G28530.3 | 26.667 | 450 | 266 | 11 | 42 | 438 | 55 | 493 | 2.17e-39 | 156 |
| Msa1078100 | AT5G28530.2 | 26.667 | 450 | 266 | 11 | 42 | 438 | 55 | 493 | 2.17e-39 | 156 |
| Msa1078100 | AT5G28530.1 | 26.682 | 446 | 263 | 11 | 42 | 434 | 55 | 489 | 2.87e-39 | 155 |
| Msa1078100 | AT5G28530.5 | 25.301 | 415 | 253 | 12 | 42 | 438 | 55 | 430 | 1.30e-26 | 116 |
| Msa1078100 | AT5G28530.4 | 25.304 | 411 | 250 | 12 | 42 | 434 | 55 | 426 | 2.49e-26 | 115 |
Find 112 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCATTGGTGAATGCTTTC+TGG | 0.174694 | 7_2:-76996592 | None:intergenic |
| TCACTCATAAGTATTGAATT+TGG | 0.202186 | 7_2:-76997696 | None:intergenic |
| CACCATCGATGACGAGCTTT+TGG | 0.216625 | 7_2:-76996134 | None:intergenic |
| AAGGAAAACAAGGCTGATTT+TGG | 0.221363 | 7_2:+76996515 | Msa1078100:CDS |
| ATAGCTTGTATAAGTCATTT+TGG | 0.235588 | 7_2:+76996554 | Msa1078100:CDS |
| CAAGAGTTATGCCCAATCTA+TGG | 0.242427 | 7_2:+76995287 | Msa1078100:CDS |
| AATGCATGTATTTCTTTAGA+TGG | 0.249459 | 7_2:+76995462 | Msa1078100:CDS |
| CTAAAATAGCGTGCTTTGTC+AGG | 0.272247 | 7_2:-76995534 | None:intergenic |
| TTTGAGTAAGAGTGATTTCA+TGG | 0.279123 | 7_2:+76996253 | Msa1078100:CDS |
| CCTTTACTTCGAGTCGGTAT+AGG | 0.287148 | 7_2:-76997260 | None:intergenic |
| TATGCCCAATCTATGGGTTT+TGG | 0.292447 | 7_2:+76995294 | Msa1078100:CDS |
| GTCAAGTGCTTGACAAGTTT+TGG | 0.299935 | 7_2:+76998190 | Msa1078100:CDS |
| GTCATGTGCTTGACAGGTTT+TGG | 0.301562 | 7_2:+76998220 | Msa1078100:CDS |
| CATATGTGAGAGACACGTTT+TGG | 0.314193 | 7_2:+76996366 | Msa1078100:CDS |
| TGATCTGTAATTATGGCATT+TGG | 0.317607 | 7_2:-76996074 | None:intergenic |
| ACTGTCATGTGCTGGACTTT+TGG | 0.327871 | 7_2:+76998107 | Msa1078100:CDS |
| AGGGCTGCATATGAATATTT+TGG | 0.330794 | 7_2:+76995867 | Msa1078100:CDS |
| ATTTGTTTAAAATGAGGAAT+TGG | 0.340063 | 7_2:+76997141 | Msa1078100:CDS |
| TTTGTGGCATATAATGAAAA+AGG | 0.344495 | 7_2:+76996157 | Msa1078100:CDS |
| TCATACTTGCTTTGAGAGAT+TGG | 0.350261 | 7_2:+76996658 | Msa1078100:CDS |
| GCCAGGGGATGCTTCTTTAG+AGG | 0.353219 | 7_2:-76997189 | None:intergenic |
| TTTGGGCTTGTTGGCCTCCT+TGG | 0.358635 | 7_2:+76998130 | Msa1078100:CDS |
| CTTTACTTCGAGTCGGTATA+GGG | 0.362130 | 7_2:-76997259 | None:intergenic |
| TACCTGTAACAATTCAAAAT+AGG | 0.377069 | 7_2:-76997848 | None:intergenic |
| TTCATGACTTGAGAATAAAA+TGG | 0.385023 | 7_2:-76997814 | None:intergenic |
| GCATGCACTCTAACCATGTT+TGG | 0.393751 | 7_2:-76996040 | None:intergenic |
| TAACTCCAAAACCCATAGAT+TGG | 0.409903 | 7_2:-76995299 | None:intergenic |
| TCTGTCTTGATCTGTAATTA+TGG | 0.410773 | 7_2:-76996081 | None:intergenic |
| AAGTGAGGAGACTACGACTT+GGG | 0.414907 | 7_2:+76995715 | Msa1078100:CDS |
| AAGGGCGTCCTCCTTCAAAA+AGG | 0.415773 | 7_2:+76997279 | Msa1078100:CDS |
| ATTTGATGAAAGAAATCATT+GGG | 0.419005 | 7_2:+76996337 | Msa1078100:CDS |
| ACTTATGAGTGAAGTAAATC+AGG | 0.421958 | 7_2:+76997707 | Msa1078100:CDS |
| AATTAAAGATATAGTGTTTG+AGG | 0.424835 | 7_2:+76996733 | Msa1078100:CDS |
| TGATGGTTTACTCCAACAAA+TGG | 0.425908 | 7_2:-76995948 | None:intergenic |
| TCATGGCCAATCTGTGTTGT+TGG | 0.431909 | 7_2:+76995968 | Msa1078100:CDS |
| TATTCTCAAGTCATGAATCA+TGG | 0.442758 | 7_2:+76997820 | Msa1078100:CDS |
| GTTGGCCTCCTTGGCAGCAA+AGG | 0.449561 | 7_2:+76998139 | Msa1078100:CDS |
| CATGGCCAATCTGTGTTGTT+GGG | 0.449991 | 7_2:+76995969 | Msa1078100:CDS |
| AAGTATTGAATTTGGATTGA+AGG | 0.452798 | 7_2:-76997688 | None:intergenic |
| AACTCCAAAACCCATAGATT+GGG | 0.455626 | 7_2:-76995298 | None:intergenic |
| GATGGTTTACTCCAACAAAT+GGG | 0.455733 | 7_2:-76995947 | None:intergenic |
| GTTCAAGTAGTTGATGTAGT+TGG | 0.457215 | 7_2:+76997490 | Msa1078100:CDS |
| ATGATGATTTGTTTAAAATG+AGG | 0.460118 | 7_2:+76997135 | Msa1078100:CDS |
| TTGGCCGTCATGTGCTTGAC+AGG | 0.462181 | 7_2:+76998214 | Msa1078100:CDS |
| TAAAATGAGGAATTGGATCA+AGG | 0.463705 | 7_2:+76997148 | Msa1078100:CDS |
| CATTCAATCTAGCATTGCAC+TGG | 0.464418 | 7_2:-76995443 | None:intergenic |
| ACTTAAAACCTTTGCTGCCA+AGG | 0.468326 | 7_2:-76998147 | None:intergenic |
| ATTGAGAGATAAAGTTGAAA+AGG | 0.468812 | 7_2:+76996496 | Msa1078100:CDS |
| AGAGTGATTTCATGGAAAAG+TGG | 0.471372 | 7_2:+76996261 | Msa1078100:CDS |
| ACTCCAACAAATGGGGCAAA+AGG | 0.479062 | 7_2:-76995939 | None:intergenic |
| AGTATTGAATTTGGATTGAA+GGG | 0.484124 | 7_2:-76997687 | None:intergenic |
| TTTGGGCAGATGCGAGATGT+AGG | 0.485083 | 7_2:+76995847 | Msa1078100:CDS |
| CTGCTGCTACTGTCATGTGC+TGG | 0.485851 | 7_2:+76998099 | Msa1078100:CDS |
| GAACCATCTTCCACAATGCC+AGG | 0.487132 | 7_2:-76997206 | None:intergenic |
| AGGATACTAAGTCCTTTACT+TGG | 0.489445 | 7_2:+76996012 | Msa1078100:CDS |
| TGGATCAAAGTATGTGAGTA+AGG | 0.495275 | 7_2:+76995383 | Msa1078100:CDS |
| TATTTGATGAAAGAAATCAT+TGG | 0.495427 | 7_2:+76996336 | Msa1078100:CDS |
| CTATACCGACTCGAAGTAAA+GGG | 0.496353 | 7_2:+76997261 | Msa1078100:CDS |
| TCATGATAATGAATGGTTGA+AGG | 0.498087 | 7_2:+76996310 | Msa1078100:CDS |
| CATGATAATGAATGGTTGAA+GGG | 0.498314 | 7_2:+76996311 | Msa1078100:CDS |
| TCCCCTGGCATTGTGGAAGA+TGG | 0.500694 | 7_2:+76997203 | Msa1078100:CDS |
| TTGAACTTCATGATAATGAA+TGG | 0.502013 | 7_2:+76996303 | Msa1078100:CDS |
| AAGAGTTATGCCCAATCTAT+GGG | 0.502102 | 7_2:+76995288 | Msa1078100:CDS |
| CCTATACCGACTCGAAGTAA+AGG | 0.502755 | 7_2:+76997260 | Msa1078100:CDS |
| CTCGTCATCGATGGTGTTTG+TGG | 0.503130 | 7_2:+76996141 | Msa1078100:CDS |
| ACAACACAGATTGGCCATGA+TGG | 0.504337 | 7_2:-76995965 | None:intergenic |
| ACCTCTAAAGAAGCATCCCC+TGG | 0.505424 | 7_2:+76997188 | Msa1078100:CDS |
| GAGTGATTTCATGGAAAAGT+GGG | 0.506412 | 7_2:+76996262 | Msa1078100:CDS |
| TTGGGCAGATGCGAGATGTA+GGG | 0.512318 | 7_2:+76995848 | Msa1078100:CDS |
| AGGAGACTACGACTTGGGGC+TGG | 0.514634 | 7_2:+76995720 | Msa1078100:CDS |
| ACTTGCTTTGAGAGATTGGA+AGG | 0.519549 | 7_2:+76996662 | Msa1078100:CDS |
| ATTTGTATCTTCTGATGAAG+AGG | 0.520293 | 7_2:+76995146 | Msa1078100:CDS |
| TGGATCCTCGTTTGAAAAGG+AGG | 0.528466 | 7_2:+76995571 | Msa1078100:CDS |
| AACGTGTCTCTCACATATGC+AGG | 0.530851 | 7_2:-76996362 | None:intergenic |
| CACAACCCAACAACACAGAT+TGG | 0.537383 | 7_2:-76995974 | None:intergenic |
| ATTCAAAGAATTTCAAGTGG+AGG | 0.539575 | 7_2:+76996616 | Msa1078100:CDS |
| TCCCAAAAGCTCGTCATCGA+TGG | 0.545629 | 7_2:+76996132 | Msa1078100:CDS |
| TTTGTTGGAGTAAACCATCA+TGG | 0.557125 | 7_2:+76995951 | Msa1078100:CDS |
| TAAAATAGCGTGCTTTGTCA+GGG | 0.562727 | 7_2:-76995533 | None:intergenic |
| GGGTTGTGCTTTATTGTCGA+AGG | 0.563681 | 7_2:+76995989 | Msa1078100:CDS |
| TTAGAACTCAATGATCAAGC+TGG | 0.567016 | 7_2:+76995594 | Msa1078100:CDS |
| AACCATCTTCCACAATGCCA+GGG | 0.580735 | 7_2:-76997205 | None:intergenic |
| AGACATACCCTTGTTAAATG+TGG | 0.581997 | 7_2:+76997020 | Msa1078100:CDS |
| ACATGGTTAGAGTGCATGCA+TGG | 0.583025 | 7_2:+76996044 | Msa1078100:CDS |
| TTACTTGGTTATTCCAAACA+TGG | 0.586529 | 7_2:+76996027 | Msa1078100:CDS |
| TTGTGCTTTATTGTCGAAGG+AGG | 0.586716 | 7_2:+76995992 | Msa1078100:CDS |
| AGAAGCATCCCCTGGCATTG+TGG | 0.590947 | 7_2:+76997196 | Msa1078100:CDS |
| TGTTTGGAATAACCAAGTAA+AGG | 0.602120 | 7_2:-76996024 | None:intergenic |
| GATCAAAACCACATTTAACA+AGG | 0.611615 | 7_2:-76997028 | None:intergenic |
| ATGATAATGAATGGTTGAAG+GGG | 0.618077 | 7_2:+76996312 | Msa1078100:CDS |
| ATTCAATCTAGCATTGCACT+GGG | 0.618258 | 7_2:-76995442 | None:intergenic |
| CGTGTTATTGATGACGACGA+CGG | 0.620902 | 7_2:-76997977 | None:intergenic |
| GATGAAGAGGAAATCAGAGA+GGG | 0.625109 | 7_2:+76995159 | Msa1078100:CDS |
| TAAAGTTGAAAAGGAAAACA+AGG | 0.627416 | 7_2:+76996505 | Msa1078100:CDS |
| AGTGAGGAGACTACGACTTG+GGG | 0.641932 | 7_2:+76995716 | Msa1078100:CDS |
| AAAATTCAAAGAATTTCAAG+TGG | 0.644675 | 7_2:+76996613 | Msa1078100:CDS |
| ATCAAAACCACATTTAACAA+GGG | 0.648419 | 7_2:-76997027 | None:intergenic |
| AAAGTGAGGAGACTACGACT+TGG | 0.649574 | 7_2:+76995714 | Msa1078100:CDS |
| GAAACTATATAGATAAAGTG+AGG | 0.649765 | 7_2:+76995700 | Msa1078100:CDS |
| ACTTGGGGCTGGAGATGCTG+AGG | 0.650883 | 7_2:+76995731 | Msa1078100:CDS |
| ATGGTTTACTCCAACAAATG+GGG | 0.652441 | 7_2:-76995946 | None:intergenic |
| TTTACTCTAGCATGTAGTCG+TGG | 0.653028 | 7_2:+76995363 | Msa1078100:CDS |
| ACCATCTTCCACAATGCCAG+GGG | 0.654020 | 7_2:-76997204 | None:intergenic |
| GGACGCCCTTTACTTCGAGT+CGG | 0.664200 | 7_2:-76997266 | None:intergenic |
| CTAAATATACTTCCAACCTG+AGG | 0.665006 | 7_2:-76995237 | None:intergenic |
| AAAACCTGTCAAGCACATGA+CGG | 0.667257 | 7_2:-76998218 | None:intergenic |
| TAAAACCTTTGCTGCCAAGG+AGG | 0.671942 | 7_2:-76998144 | None:intergenic |
| CTTGTACTTTAGATGCACAC+AGG | 0.674948 | 7_2:-76997462 | None:intergenic |
| TGATGAAGAGGAAATCAGAG+AGG | 0.679814 | 7_2:+76995158 | Msa1078100:CDS |
| ACGGAGTGGAAATCAACAAG+AGG | 0.685217 | 7_2:+76997367 | Msa1078100:CDS |
| ACGACGACGGATCATTCACA+TGG | 0.715885 | 7_2:-76997964 | None:intergenic |
| TTTGGGAGGAATGGACATGG+CGG | 0.767232 | 7_2:+76997648 | Msa1078100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTGATTTATCATATAA+AGG | - | chr7_2:76994994-76995013 | None:intergenic | 10.0% |
| !!! | TTTTTAATTTATTGCATTAG+TGG | + | chr7_2:76995116-76995135 | Msa1078100:intron | 15.0% |
| !! | GTCTAATATTCAATATTTAA+TGG | + | chr7_2:76997434-76997453 | Msa1078100:intron | 15.0% |
| !!! | TTTAATACGTATATGTTTTT+AGG | + | chr7_2:76997611-76997630 | Msa1078100:intron | 15.0% |
| !!! | TTAATACGTATATGTTTTTA+GGG | + | chr7_2:76997612-76997631 | Msa1078100:intron | 15.0% |
| !! | TACAAATTCATTAATTATGT+TGG | + | chr7_2:76997918-76997937 | Msa1078100:intron | 15.0% |
| !! | TAAGTTAACTACCTTAAATT+GGG | + | chr7_2:76994935-76994954 | Msa1078100:intron | 20.0% |
| !!! | TTTTGATATTGAAACTGATT+TGG | + | chr7_2:76995023-76995042 | Msa1078100:intron | 20.0% |
| !!! | TTTTAGAAGTAGTAAGTTTT+TGG | + | chr7_2:76995551-76995570 | Msa1078100:CDS | 20.0% |
| !! | TATTTGATGAAAGAAATCAT+TGG | + | chr7_2:76996336-76996355 | Msa1078100:CDS | 20.0% |
| !! | ATTTGATGAAAGAAATCATT+GGG | + | chr7_2:76996337-76996356 | Msa1078100:CDS | 20.0% |
| !!! | AAATTCTTTGAATTTTGCAT+TGG | - | chr7_2:76996609-76996628 | None:intergenic | 20.0% |
| !! | AAAATTCAAAGAATTTCAAG+TGG | + | chr7_2:76996613-76996632 | Msa1078100:CDS | 20.0% |
| !! | AATTAAAGATATAGTGTTTG+AGG | + | chr7_2:76996733-76996752 | Msa1078100:CDS | 20.0% |
| !!! | AATTCAAAGGTATTTTATGT+AGG | + | chr7_2:76996807-76996826 | Msa1078100:intron | 20.0% |
| !!! | CATTTTAAACAAATCATCAT+CGG | - | chr7_2:76997135-76997154 | None:intergenic | 20.0% |
| !!! | ATGATGATTTGTTTAAAATG+AGG | + | chr7_2:76997135-76997154 | Msa1078100:CDS | 20.0% |
| !!! | ATTTGTTTAAAATGAGGAAT+TGG | + | chr7_2:76997141-76997160 | Msa1078100:CDS | 20.0% |
| !! | AATATTCAATATTTAATGGC+AGG | + | chr7_2:76997438-76997457 | Msa1078100:intron | 20.0% |
| !! | ATATTCAATATTTAATGGCA+GGG | + | chr7_2:76997439-76997458 | Msa1078100:intron | 20.0% |
| !!! | TAATACGTATATGTTTTTAG+GGG | + | chr7_2:76997613-76997632 | Msa1078100:intron | 20.0% |
| !!! | AAGTATTTTCCATGTTATTT+AGG | + | chr7_2:76997789-76997808 | Msa1078100:intron | 20.0% |
| ! | GTAAGTTAACTACCTTAAAT+TGG | + | chr7_2:76994934-76994953 | Msa1078100:intron | 25.0% |
| ! | TCACAATAAGCATTAAATCT+AGG | - | chr7_2:76995054-76995073 | None:intergenic | 25.0% |
| ! | AGTAACAAAAATACAGATGA+TGG | + | chr7_2:76995330-76995349 | Msa1078100:CDS | 25.0% |
| ! | AATGCATGTATTTCTTTAGA+TGG | + | chr7_2:76995462-76995481 | Msa1078100:CDS | 25.0% |
| !! | AAGCAGAAATTTTTGATCAA+TGG | + | chr7_2:76995626-76995645 | Msa1078100:intron | 25.0% |
| ! | GAAACTATATAGATAAAGTG+AGG | + | chr7_2:76995700-76995719 | Msa1078100:CDS | 25.0% |
| ! | TTTGTGGCATATAATGAAAA+AGG | + | chr7_2:76996157-76996176 | Msa1078100:CDS | 25.0% |
| !! | TTGAACTTCATGATAATGAA+TGG | + | chr7_2:76996303-76996322 | Msa1078100:CDS | 25.0% |
| ! | ATTGAGAGATAAAGTTGAAA+AGG | + | chr7_2:76996496-76996515 | Msa1078100:CDS | 25.0% |
| ! | TAAAGTTGAAAAGGAAAACA+AGG | + | chr7_2:76996505-76996524 | Msa1078100:CDS | 25.0% |
| !!! | ATAGCTTGTATAAGTCATTT+TGG | + | chr7_2:76996554-76996573 | Msa1078100:CDS | 25.0% |
| !! | TGTTGTTTGTTTCAATTCAA+AGG | + | chr7_2:76996794-76996813 | Msa1078100:intron | 25.0% |
| ! | NNGTTAACTTAAGAACACAA+AGG | - | chr7_2:76996838-76996857 | None:intergenic | 25.0% |
| ! | ATCAAAACCACATTTAACAA+GGG | - | chr7_2:76997030-76997049 | None:intergenic | 25.0% |
| !!! | AATACGTATATGTTTTTAGG+GGG | + | chr7_2:76997614-76997633 | Msa1078100:intron | 25.0% |
| !! | AGTATTGAATTTGGATTGAA+GGG | - | chr7_2:76997690-76997709 | None:intergenic | 25.0% |
| !!! | AAGTATTGAATTTGGATTGA+AGG | - | chr7_2:76997691-76997710 | None:intergenic | 25.0% |
| !!! | TCACTCATAAGTATTGAATT+TGG | - | chr7_2:76997699-76997718 | None:intergenic | 25.0% |
| ! | TTCCTGTAACATTAATATTG+TGG | + | chr7_2:76997759-76997778 | Msa1078100:intron | 25.0% |
| ! | ATCCACAATATTAATGTTAC+AGG | - | chr7_2:76997764-76997783 | None:intergenic | 25.0% |
| ! | AAAATGGAACCTAAATAACA+TGG | - | chr7_2:76997801-76997820 | None:intergenic | 25.0% |
| ! | TTCATGACTTGAGAATAAAA+TGG | - | chr7_2:76997817-76997836 | None:intergenic | 25.0% |
| !!! | TTCCTATTTTGAATTGTTAC+AGG | + | chr7_2:76997846-76997865 | Msa1078100:CDS | 25.0% |
| ! | TACCTGTAACAATTCAAAAT+AGG | - | chr7_2:76997851-76997870 | None:intergenic | 25.0% |
| ATTTGTATCTTCTGATGAAG+AGG | + | chr7_2:76995146-76995165 | Msa1078100:CDS | 30.0% | |
| ! | GGGTTTTTGTTAAAGGATTT+GGG | - | chr7_2:76995425-76995444 | None:intergenic | 30.0% |
| ! | TGGGTTTTTGTTAAAGGATT+TGG | - | chr7_2:76995426-76995445 | None:intergenic | 30.0% |
| GGTTATGAGAATATGACATT+TGG | + | chr7_2:76995663-76995682 | Msa1078100:intron | 30.0% | |
| ! | GAATATGACATTTGGTGAAA+AGG | + | chr7_2:76995671-76995690 | Msa1078100:intron | 30.0% |
| !!! | TCGCTTACGAAATGTTTTTT+GGG | + | chr7_2:76995830-76995849 | Msa1078100:CDS | 30.0% |
| ! | TGTTTGGAATAACCAAGTAA+AGG | - | chr7_2:76996027-76996046 | None:intergenic | 30.0% |
| TTACTTGGTTATTCCAAACA+TGG | + | chr7_2:76996027-76996046 | Msa1078100:CDS | 30.0% | |
| TGATCTGTAATTATGGCATT+TGG | - | chr7_2:76996077-76996096 | None:intergenic | 30.0% | |
| TCTGTCTTGATCTGTAATTA+TGG | - | chr7_2:76996084-76996103 | None:intergenic | 30.0% | |
| ATCCATGAAAAATGCAATTG+CGG | + | chr7_2:76996103-76996122 | Msa1078100:CDS | 30.0% | |
| ! | TGTTTTCATAGACTCGTAAT+CGG | - | chr7_2:76996207-76996226 | None:intergenic | 30.0% |
| TTTGAGTAAGAGTGATTTCA+TGG | + | chr7_2:76996253-76996272 | Msa1078100:CDS | 30.0% | |
| ! | TCATGATAATGAATGGTTGA+AGG | + | chr7_2:76996310-76996329 | Msa1078100:CDS | 30.0% |
| ! | CATGATAATGAATGGTTGAA+GGG | + | chr7_2:76996311-76996330 | Msa1078100:CDS | 30.0% |
| ! | ATGATAATGAATGGTTGAAG+GGG | + | chr7_2:76996312-76996331 | Msa1078100:CDS | 30.0% |
| !!! | AGTATGAACTCGTTTTTTGA+TGG | + | chr7_2:76996419-76996438 | Msa1078100:CDS | 30.0% |
| ! | ATTCAAAGAATTTCAAGTGG+AGG | + | chr7_2:76996616-76996635 | Msa1078100:CDS | 30.0% |
| GATCAAAACCACATTTAACA+AGG | - | chr7_2:76997031-76997050 | None:intergenic | 30.0% | |
| !!! | TGTGGTTTTGATCATTTAGT+TGG | + | chr7_2:76997038-76997057 | Msa1078100:CDS | 30.0% |
| TAAAATGAGGAATTGGATCA+AGG | + | chr7_2:76997148-76997167 | Msa1078100:CDS | 30.0% | |
| ! | TTAGAAGACTTCCTTTTTGA+AGG | - | chr7_2:76997293-76997312 | None:intergenic | 30.0% |
| ACTTATGAGTGAAGTAAATC+AGG | + | chr7_2:76997707-76997726 | Msa1078100:CDS | 30.0% | |
| TATTCTCAAGTCATGAATCA+TGG | + | chr7_2:76997820-76997839 | Msa1078100:CDS | 30.0% | |
| ATGGGTGATAACCCAATTTA+AGG | - | chr7_2:76994949-76994968 | None:intergenic | 35.0% | |
| !! | GTAGTTTGATCAGTTGATGA+GGG | - | chr7_2:76994972-76994991 | None:intergenic | 35.0% |
| TCATGAAGATGAAAAACCTC+AGG | + | chr7_2:76995221-76995240 | Msa1078100:CDS | 35.0% | |
| CTAAATATACTTCCAACCTG+AGG | - | chr7_2:76995240-76995259 | None:intergenic | 35.0% | |
| AAGAGTTATGCCCAATCTAT+GGG | + | chr7_2:76995288-76995307 | Msa1078100:CDS | 35.0% | |
| AACTCCAAAACCCATAGATT+GGG | - | chr7_2:76995301-76995320 | None:intergenic | 35.0% | |
| TAACTCCAAAACCCATAGAT+TGG | - | chr7_2:76995302-76995321 | None:intergenic | 35.0% | |
| TGGATCAAAGTATGTGAGTA+AGG | + | chr7_2:76995383-76995402 | Msa1078100:CDS | 35.0% | |
| ! | TTGCACTGGGTTTTTGTTAA+AGG | - | chr7_2:76995432-76995451 | None:intergenic | 35.0% |
| ATTCAATCTAGCATTGCACT+GGG | - | chr7_2:76995445-76995464 | None:intergenic | 35.0% | |
| TAAAATAGCGTGCTTTGTCA+GGG | - | chr7_2:76995536-76995555 | None:intergenic | 35.0% | |
| ! | TTTTGGATCCTCGTTTGAAA+AGG | + | chr7_2:76995568-76995587 | Msa1078100:CDS | 35.0% |
| TTAGAACTCAATGATCAAGC+TGG | + | chr7_2:76995594-76995613 | Msa1078100:CDS | 35.0% | |
| TCAATGGTTGTTGAAGCAAA+TGG | + | chr7_2:76995642-76995661 | Msa1078100:intron | 35.0% | |
| !!! | GTCGCTTACGAAATGTTTTT+TGG | + | chr7_2:76995829-76995848 | Msa1078100:CDS | 35.0% |
| ! | AGGGCTGCATATGAATATTT+TGG | + | chr7_2:76995867-76995886 | Msa1078100:CDS | 35.0% |
| ATGGTTTACTCCAACAAATG+GGG | - | chr7_2:76995949-76995968 | None:intergenic | 35.0% | |
| GATGGTTTACTCCAACAAAT+GGG | - | chr7_2:76995950-76995969 | None:intergenic | 35.0% | |
| TGATGGTTTACTCCAACAAA+TGG | - | chr7_2:76995951-76995970 | None:intergenic | 35.0% | |
| TTTGTTGGAGTAAACCATCA+TGG | + | chr7_2:76995951-76995970 | Msa1078100:CDS | 35.0% | |
| AGGATACTAAGTCCTTTACT+TGG | + | chr7_2:76996012-76996031 | Msa1078100:CDS | 35.0% | |
| !! | GAGTATCTACTTAGCTTTTC+TGG | - | chr7_2:76996185-76996204 | None:intergenic | 35.0% |
| AGAGTGATTTCATGGAAAAG+TGG | + | chr7_2:76996261-76996280 | Msa1078100:CDS | 35.0% | |
| GAGTGATTTCATGGAAAAGT+GGG | + | chr7_2:76996262-76996281 | Msa1078100:CDS | 35.0% | |
| ! | ATATGTGAGAGACACGTTTT+GGG | + | chr7_2:76996367-76996386 | Msa1078100:CDS | 35.0% |
| !! | AAGGAAAACAAGGCTGATTT+TGG | + | chr7_2:76996515-76996534 | Msa1078100:CDS | 35.0% |
| !! | TCATACTTGCTTTGAGAGAT+TGG | + | chr7_2:76996658-76996677 | Msa1078100:CDS | 35.0% |
| CTCAAAGTCTTTCTCATTGA+AGG | - | chr7_2:76996762-76996781 | None:intergenic | 35.0% | |
| CCACTGAGAGAAAATATAAG+AGG | - | chr7_2:76996982-76997001 | None:intergenic | 35.0% | |
| ! | CCTCTTATATTTTCTCTCAG+TGG | + | chr7_2:76996979-76996998 | Msa1078100:intron | 35.0% |
| ! | CTTATATTTTCTCTCAGTGG+AGG | + | chr7_2:76996982-76997001 | Msa1078100:intron | 35.0% |
| AGACATACCCTTGTTAAATG+TGG | + | chr7_2:76997020-76997039 | Msa1078100:CDS | 35.0% | |
| AGACCCAAAAAAGAAGTCAA+CGG | + | chr7_2:76997348-76997367 | Msa1078100:CDS | 35.0% | |
| !!! | ACTCCGTTGACTTCTTTTTT+GGG | - | chr7_2:76997354-76997373 | None:intergenic | 35.0% |
| ! | GTTCAAGTAGTTGATGTAGT+TGG | + | chr7_2:76997490-76997509 | Msa1078100:CDS | 35.0% |
| !! | TAGGGGGAACAAATTAGTTT+TGG | + | chr7_2:76997630-76997649 | Msa1078100:intron | 35.0% |
| !!! | AGGGGGAACAAATTAGTTTT+GGG | + | chr7_2:76997631-76997650 | Msa1078100:intron | 35.0% |
| !!! | CAAATTAGTTTTGGGAGGAA+TGG | + | chr7_2:76997639-76997658 | Msa1078100:CDS | 35.0% |
| ! | ATGTTGGTTGTTCTCTTTGT+AGG | + | chr7_2:76997934-76997953 | Msa1078100:intron | 35.0% |
| ! | GTGAAGATTGTTCTTTTGCT+CGG | + | chr7_2:76998019-76998038 | Msa1078100:intron | 35.0% |
| ! | TGAAGATTGTTCTTTTGCTC+GGG | + | chr7_2:76998020-76998039 | Msa1078100:intron | 35.0% |
| ! | TTTCGTGTTTTTCCTTTGCT+AGG | + | chr7_2:76998073-76998092 | Msa1078100:intron | 35.0% |
| ! | TTCGTGTTTTTCCTTTGCTA+GGG | + | chr7_2:76998074-76998093 | Msa1078100:intron | 35.0% |
| !! | TTGATCAGTTGATGAGGGAT+GGG | - | chr7_2:76994967-76994986 | None:intergenic | 40.0% |
| !! | TTTGATCAGTTGATGAGGGA+TGG | - | chr7_2:76994968-76994987 | None:intergenic | 40.0% |
| ! | GGTAGTTTGATCAGTTGATG+AGG | - | chr7_2:76994973-76994992 | None:intergenic | 40.0% |
| TGATGAAGAGGAAATCAGAG+AGG | + | chr7_2:76995158-76995177 | Msa1078100:CDS | 40.0% | |
| GATGAAGAGGAAATCAGAGA+GGG | + | chr7_2:76995159-76995178 | Msa1078100:CDS | 40.0% | |
| GAAGATGAAAAACCTCAGGT+TGG | + | chr7_2:76995225-76995244 | Msa1078100:CDS | 40.0% | |
| CAAGAGTTATGCCCAATCTA+TGG | + | chr7_2:76995287-76995306 | Msa1078100:CDS | 40.0% | |
| ! | TATGCCCAATCTATGGGTTT+TGG | + | chr7_2:76995294-76995313 | Msa1078100:CDS | 40.0% |
| TTTACTCTAGCATGTAGTCG+TGG | + | chr7_2:76995363-76995382 | Msa1078100:CDS | 40.0% | |
| CATTCAATCTAGCATTGCAC+TGG | - | chr7_2:76995446-76995465 | None:intergenic | 40.0% | |
| CTAAAATAGCGTGCTTTGTC+AGG | - | chr7_2:76995537-76995556 | None:intergenic | 40.0% | |
| ! | TCTAACCTCCTTTTCAAACG+AGG | - | chr7_2:76995579-76995598 | None:intergenic | 40.0% |
| ! | TTGTGCTTTATTGTCGAAGG+AGG | + | chr7_2:76995992-76996011 | Msa1078100:CDS | 40.0% |
| ! | AGCCGCAATTGCATTTTTCA+TGG | - | chr7_2:76996108-76996127 | None:intergenic | 40.0% |
| ! | CATATGTGAGAGACACGTTT+TGG | + | chr7_2:76996366-76996385 | Msa1078100:CDS | 40.0% |
| ! | TTGCATTGGTGAATGCTTTC+TGG | - | chr7_2:76996595-76996614 | None:intergenic | 40.0% |
| !! | ACTTGCTTTGAGAGATTGGA+AGG | + | chr7_2:76996662-76996681 | Msa1078100:CDS | 40.0% |
| ! | TATTTTCTCTCAGTGGAGGA+AGG | + | chr7_2:76996986-76997005 | Msa1078100:intron | 40.0% |
| ! | CTTTTACGAAGTTGCTTCTG+AGG | + | chr7_2:76997100-76997119 | Msa1078100:CDS | 40.0% |
| CTTTACTTCGAGTCGGTATA+GGG | - | chr7_2:76997262-76997281 | None:intergenic | 40.0% | |
| !! | CTATACCGACTCGAAGTAAA+GGG | + | chr7_2:76997261-76997280 | Msa1078100:CDS | 40.0% |
| !! | GAAGACTTCCTTTTTGAAGG+AGG | - | chr7_2:76997290-76997309 | None:intergenic | 40.0% |
| !!! | CACTCCGTTGACTTCTTTTT+TGG | - | chr7_2:76997355-76997374 | None:intergenic | 40.0% |
| CAAAAAAGAAGTCAACGGAG+TGG | + | chr7_2:76997353-76997372 | Msa1078100:CDS | 40.0% | |
| CTTGTACTTTAGATGCACAC+AGG | - | chr7_2:76997465-76997484 | None:intergenic | 40.0% | |
| !!! | GGGAACAAATTAGTTTTGGG+AGG | + | chr7_2:76997634-76997653 | Msa1078100:CDS | 40.0% |
| !!! | ATGTGCTGGACTTTTGGTTT+GGG | + | chr7_2:76998113-76998132 | Msa1078100:CDS | 40.0% |
| ACTTAAAACCTTTGCTGCCA+AGG | - | chr7_2:76998150-76998169 | None:intergenic | 40.0% | |
| !!! | GCAGCAAAGGTTTTAAGTCT+GGG | + | chr7_2:76998152-76998171 | Msa1078100:CDS | 40.0% |
| !!! | CAGCAAAGGTTTTAAGTCTG+GGG | + | chr7_2:76998153-76998172 | Msa1078100:CDS | 40.0% |
| !!! | AGCAAAGGTTTTAAGTCTGG+GGG | + | chr7_2:76998154-76998173 | Msa1078100:CDS | 40.0% |
| ! | GTCAAGTGCTTGACAAGTTT+TGG | + | chr7_2:76998190-76998209 | Msa1078100:CDS | 40.0% |
| !!! | GTGCTTGACAAGTTTTGGTT+TGG | + | chr7_2:76998195-76998214 | Msa1078100:CDS | 40.0% |
| AAAACCTGTCAAGCACATGA+CGG | - | chr7_2:76998221-76998240 | None:intergenic | 40.0% | |
| TGGATCCTCGTTTGAAAAGG+AGG | + | chr7_2:76995571-76995590 | Msa1078100:CDS | 45.0% | |
| AAAGTGAGGAGACTACGACT+TGG | + | chr7_2:76995714-76995733 | Msa1078100:CDS | 45.0% | |
| AAGTGAGGAGACTACGACTT+GGG | + | chr7_2:76995715-76995734 | Msa1078100:CDS | 45.0% | |
| ! | ATGCCTTTTGCCCCATTTGT+TGG | + | chr7_2:76995936-76995955 | Msa1078100:CDS | 45.0% |
| ACTCCAACAAATGGGGCAAA+AGG | - | chr7_2:76995942-76995961 | None:intergenic | 45.0% | |
| ! | ACAACACAGATTGGCCATGA+TGG | - | chr7_2:76995968-76995987 | None:intergenic | 45.0% |
| TCATGGCCAATCTGTGTTGT+TGG | + | chr7_2:76995968-76995987 | Msa1078100:CDS | 45.0% | |
| ! | CATGGCCAATCTGTGTTGTT+GGG | + | chr7_2:76995969-76995988 | Msa1078100:CDS | 45.0% |
| CACAACCCAACAACACAGAT+TGG | - | chr7_2:76995977-76995996 | None:intergenic | 45.0% | |
| ! | GGGTTGTGCTTTATTGTCGA+AGG | + | chr7_2:76995989-76996008 | Msa1078100:CDS | 45.0% |
| GCATGCACTCTAACCATGTT+TGG | - | chr7_2:76996043-76996062 | None:intergenic | 45.0% | |
| ACATGGTTAGAGTGCATGCA+TGG | + | chr7_2:76996044-76996063 | Msa1078100:CDS | 45.0% | |
| ! | ACCATCGATGACGAGCTTTT+GGG | - | chr7_2:76996136-76996155 | None:intergenic | 45.0% |
| AACGTGTCTCTCACATATGC+AGG | - | chr7_2:76996365-76996384 | None:intergenic | 45.0% | |
| AACCATCTTCCACAATGCCA+GGG | - | chr7_2:76997208-76997227 | None:intergenic | 45.0% | |
| CCTTTACTTCGAGTCGGTAT+AGG | - | chr7_2:76997263-76997282 | None:intergenic | 45.0% | |
| !! | CCTATACCGACTCGAAGTAA+AGG | + | chr7_2:76997260-76997279 | Msa1078100:CDS | 45.0% |
| ACGGAGTGGAAATCAACAAG+AGG | + | chr7_2:76997367-76997386 | Msa1078100:CDS | 45.0% | |
| !!! | AGTTTTGGGAGGAATGGACA+TGG | + | chr7_2:76997645-76997664 | Msa1078100:CDS | 45.0% |
| !! | CGTGTTATTGATGACGACGA+CGG | - | chr7_2:76997980-76997999 | None:intergenic | 45.0% |
| ! | ACTGTCATGTGCTGGACTTT+TGG | + | chr7_2:76998107-76998126 | Msa1078100:CDS | 45.0% |
| !! | CATGTGCTGGACTTTTGGTT+TGG | + | chr7_2:76998112-76998131 | Msa1078100:CDS | 45.0% |
| !!! | GACTTTTGGTTTGGGCTTGT+TGG | + | chr7_2:76998121-76998140 | Msa1078100:CDS | 45.0% |
| TAAAACCTTTGCTGCCAAGG+AGG | - | chr7_2:76998147-76998166 | None:intergenic | 45.0% | |
| !!! | GGCAGCAAAGGTTTTAAGTC+TGG | + | chr7_2:76998151-76998170 | Msa1078100:CDS | 45.0% |
| ! | GTCATGTGCTTGACAGGTTT+TGG | + | chr7_2:76998220-76998239 | Msa1078100:CDS | 45.0% |
| !! | TGCTTGACAGGTTTTGGTCT+GGG | + | chr7_2:76998226-76998245 | Msa1078100:CDS | 45.0% |
| AGTGAGGAGACTACGACTTG+GGG | + | chr7_2:76995716-76995735 | Msa1078100:CDS | 50.0% | |
| TTTGGGCAGATGCGAGATGT+AGG | + | chr7_2:76995847-76995866 | Msa1078100:CDS | 50.0% | |
| TTGGGCAGATGCGAGATGTA+GGG | + | chr7_2:76995848-76995867 | Msa1078100:CDS | 50.0% | |
| TCCCAAAAGCTCGTCATCGA+TGG | + | chr7_2:76996132-76996151 | Msa1078100:CDS | 50.0% | |
| ! | CACCATCGATGACGAGCTTT+TGG | - | chr7_2:76996137-76996156 | None:intergenic | 50.0% |
| CTCGTCATCGATGGTGTTTG+TGG | + | chr7_2:76996141-76996160 | Msa1078100:CDS | 50.0% | |
| !! | TGTGAGAGACACGTTTTGGG+CGG | + | chr7_2:76996370-76996389 | Msa1078100:CDS | 50.0% |
| !! | ACCTCTAAAGAAGCATCCCC+TGG | + | chr7_2:76997188-76997207 | Msa1078100:CDS | 50.0% |
| ACCATCTTCCACAATGCCAG+GGG | - | chr7_2:76997207-76997226 | None:intergenic | 50.0% | |
| GAACCATCTTCCACAATGCC+AGG | - | chr7_2:76997209-76997228 | None:intergenic | 50.0% | |
| !! | AAGGGCGTCCTCCTTCAAAA+AGG | + | chr7_2:76997279-76997298 | Msa1078100:CDS | 50.0% |
| TTTGGGAGGAATGGACATGG+CGG | + | chr7_2:76997648-76997667 | Msa1078100:CDS | 50.0% | |
| ACGACGACGGATCATTCACA+TGG | - | chr7_2:76997967-76997986 | None:intergenic | 50.0% | |
| !! | GTGCTTGACAGGTTTTGGTC+TGG | + | chr7_2:76998225-76998244 | Msa1078100:CDS | 50.0% |
| !! | GTGAGAGACACGTTTTGGGC+GGG | + | chr7_2:76996371-76996390 | Msa1078100:CDS | 55.0% |
| GCCAGGGGATGCTTCTTTAG+AGG | - | chr7_2:76997192-76997211 | None:intergenic | 55.0% | |
| !! | AGAAGCATCCCCTGGCATTG+TGG | + | chr7_2:76997196-76997215 | Msa1078100:CDS | 55.0% |
| TCCCCTGGCATTGTGGAAGA+TGG | + | chr7_2:76997203-76997222 | Msa1078100:CDS | 55.0% | |
| GGACGCCCTTTACTTCGAGT+CGG | - | chr7_2:76997269-76997288 | None:intergenic | 55.0% | |
| TAGCAGCAGTGCCCTAGCAA+AGG | - | chr7_2:76998088-76998107 | None:intergenic | 55.0% | |
| CTGCTGCTACTGTCATGTGC+TGG | + | chr7_2:76998099-76998118 | Msa1078100:CDS | 55.0% | |
| !! | TTTGGGCTTGTTGGCCTCCT+TGG | + | chr7_2:76998130-76998149 | Msa1078100:CDS | 55.0% |
| TTGGCCGTCATGTGCTTGAC+AGG | + | chr7_2:76998214-76998233 | Msa1078100:CDS | 55.0% | |
| ! | AGGAGACTACGACTTGGGGC+TGG | + | chr7_2:76995720-76995739 | Msa1078100:CDS | 60.0% |
| ACTTGGGGCTGGAGATGCTG+AGG | + | chr7_2:76995731-76995750 | Msa1078100:CDS | 60.0% | |
| ! | GTTGGCCTCCTTGGCAGCAA+AGG | + | chr7_2:76998139-76998158 | Msa1078100:CDS | 60.0% |
| ! | TCGGGCACTGCTGCTGCGTT+AGG | + | chr7_2:76998038-76998057 | Msa1078100:intron | 65.0% |
| GGCACTGCTGCTGCGTTAGG+TGG | + | chr7_2:76998041-76998060 | Msa1078100:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 76994912 | 76998252 | 76994912 | ID=Msa1078100;Name=Msa1078100 |
| chr7_2 | mRNA | 76994912 | 76998252 | 76994912 | ID=Msa1078100-mRNA-1;Parent=Msa1078100;Name=Msa1078100-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0.62|0.33|1|1|1|9|0|795 |
| chr7_2 | exon | 76994912 | 76994933 | 76994912 | ID=Msa1078100-mRNA-1:exon:18815;Parent=Msa1078100-mRNA-1 |
| chr7_2 | exon | 76995136 | 76995623 | 76995136 | ID=Msa1078100-mRNA-1:exon:18816;Parent=Msa1078100-mRNA-1 |
| chr7_2 | exon | 76995693 | 76996754 | 76995693 | ID=Msa1078100-mRNA-1:exon:18817;Parent=Msa1078100-mRNA-1 |
| chr7_2 | exon | 76996999 | 76997388 | 76996999 | ID=Msa1078100-mRNA-1:exon:18818;Parent=Msa1078100-mRNA-1 |
| chr7_2 | exon | 76997460 | 76997531 | 76997460 | ID=Msa1078100-mRNA-1:exon:18819;Parent=Msa1078100-mRNA-1 |
| chr7_2 | exon | 76997633 | 76997728 | 76997633 | ID=Msa1078100-mRNA-1:exon:18820;Parent=Msa1078100-mRNA-1 |
| chr7_2 | exon | 76997811 | 76997867 | 76997811 | ID=Msa1078100-mRNA-1:exon:18821;Parent=Msa1078100-mRNA-1 |
| chr7_2 | exon | 76997956 | 76997998 | 76997956 | ID=Msa1078100-mRNA-1:exon:18822;Parent=Msa1078100-mRNA-1 |
| chr7_2 | exon | 76998095 | 76998252 | 76998095 | ID=Msa1078100-mRNA-1:exon:18823;Parent=Msa1078100-mRNA-1 |
| chr7_2 | CDS | 76994912 | 76994933 | 76994912 | ID=Msa1078100-mRNA-1:cds;Parent=Msa1078100-mRNA-1 |
| chr7_2 | CDS | 76995136 | 76995623 | 76995136 | ID=Msa1078100-mRNA-1:cds;Parent=Msa1078100-mRNA-1 |
| chr7_2 | CDS | 76995693 | 76996754 | 76995693 | ID=Msa1078100-mRNA-1:cds;Parent=Msa1078100-mRNA-1 |
| chr7_2 | CDS | 76996999 | 76997388 | 76996999 | ID=Msa1078100-mRNA-1:cds;Parent=Msa1078100-mRNA-1 |
| chr7_2 | CDS | 76997460 | 76997531 | 76997460 | ID=Msa1078100-mRNA-1:cds;Parent=Msa1078100-mRNA-1 |
| chr7_2 | CDS | 76997633 | 76997728 | 76997633 | ID=Msa1078100-mRNA-1:cds;Parent=Msa1078100-mRNA-1 |
| chr7_2 | CDS | 76997811 | 76997867 | 76997811 | ID=Msa1078100-mRNA-1:cds;Parent=Msa1078100-mRNA-1 |
| chr7_2 | CDS | 76997956 | 76997998 | 76997956 | ID=Msa1078100-mRNA-1:cds;Parent=Msa1078100-mRNA-1 |
| chr7_2 | CDS | 76998095 | 76998252 | 76998095 | ID=Msa1078100-mRNA-1:cds;Parent=Msa1078100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
