AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1080980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1080980 MtrunA17_Chr7g0267751 95.683 139 6 0 117 255 290 428 2.18e-93 286
Msa1080980 MtrunA17_Chr7g0267751 85.950 121 9 2 1 117 1 117 2.40e-64 211
Msa1080980 MtrunA17_Chr7g0267771 74.026 154 40 0 103 256 229 382 6.06e-76 238
Msa1080980 MtrunA17_Chr7g0267771 55.714 70 27 2 1 70 1 66 1.66e-14 72.8
Msa1080980 MtrunA17_Chr1g0170281 68.125 160 51 0 102 261 258 417 1.10e-70 227
Msa1080980 MtrunA17_Chr3g0131181 64.497 169 60 0 87 255 154 322 2.40e-70 225
Msa1080980 MtrunA17_Chr1g0176751 73.381 139 37 0 117 255 279 417 3.94e-69 223
Msa1080980 MtrunA17_Chr1g0176421 69.935 153 46 0 103 255 302 454 5.54e-69 224
Msa1080980 MtrunA17_Chr8g0385341 71.223 139 40 0 117 255 185 323 4.23e-67 216
Msa1080980 MtrunA17_Chr1g0200601 69.784 139 42 0 117 255 185 323 1.40e-65 212
Msa1080980 MtrunA17_Chr8g0387671 68.345 139 44 0 117 255 221 359 4.50e-64 208
Msa1080980 MtrunA17_Chr5g0441691 66.187 139 47 0 117 255 223 361 4.55e-64 208
Msa1080980 MtrunA17_Chr5g0448721 66.897 145 48 0 117 261 251 395 4.30e-62 204
Msa1080980 MtrunA17_Chr0c02g0489761 64.748 139 49 0 117 255 233 371 5.00e-62 203
Msa1080980 MtrunA17_Chr5g0444171 65.468 139 48 0 117 255 247 385 9.99e-61 200
Msa1080980 MtrunA17_Chr4g0074811 63.309 139 51 0 117 255 246 384 5.63e-59 196
Msa1080980 MtrunA17_Chr5g0397101 66.176 136 45 1 120 255 225 359 1.00e-58 194
Msa1080980 MtrunA17_Chr3g0098951 64.029 139 49 1 117 255 239 376 3.02e-57 191
Msa1080980 MtrunA17_Chr7g0242561 60.432 139 55 0 117 255 211 349 9.21e-55 184
Msa1080980 MtrunA17_Chr1g0157131 58.273 139 58 0 117 255 229 367 5.51e-54 182
Msa1080980 MtrunA17_Chr7g0257751 45.588 204 85 1 52 255 174 351 6.22e-54 182
Msa1080980 MtrunA17_Chr1g0173541 44.608 204 87 1 52 255 168 345 2.80e-53 180
Msa1080980 MtrunA17_Chr4g0059951 56.835 139 60 0 117 255 228 366 3.65e-52 178
Msa1080980 MtrunA17_Chr4g0074791 51.592 157 76 0 99 255 233 389 7.82e-50 171
Msa1080980 MtrunA17_Chr4g0033371 50.980 153 75 0 103 255 213 365 8.38e-48 166
Msa1080980 MtrunA17_Chr5g0405421 52.899 138 65 0 117 254 256 393 5.90e-47 164
Msa1080980 MtrunA17_Chr5g0444191 57.377 122 49 1 117 238 63 181 5.22e-43 145
Msa1080980 MtrunA17_Chr4g0045261 47.222 144 75 1 118 261 297 439 2.83e-38 140
Msa1080980 MtrunA17_Chr8g0374701 47.445 137 71 1 118 254 288 423 6.84e-38 139
Msa1080980 MtrunA17_Chr5g0402551 46.207 145 75 2 118 261 294 436 2.84e-37 138
Msa1080980 MtrunA17_Chr7g0256001 46.377 138 70 2 118 253 301 436 8.27e-36 134
Msa1080980 MtrunA17_Chr3g0127571 45.985 137 72 1 118 254 298 432 2.34e-34 130
Msa1080980 MtrunA17_Chr7g0276111 43.056 144 80 2 118 261 304 445 1.05e-33 128
Msa1080980 MtrunA17_Chr1g0190131 49.123 114 57 1 117 229 160 273 8.72e-31 115
Msa1080980 MtrunA17_Chr1g0203881 48.598 107 55 0 117 223 196 302 1.09e-29 116
Msa1080980 MtrunA17_Chr3g0132591 44.340 106 59 0 115 220 255 360 1.82e-25 104
Msa1080980 MtrunA17_Chr7g0274941 43.478 115 63 1 116 228 168 282 3.47e-24 98.6
Msa1080980 MtrunA17_Chr8g0355131 36.806 144 85 3 115 253 196 338 3.47e-22 95.5
Msa1080980 MtrunA17_Chr5g0441771 59.091 66 27 0 186 251 18 83 7.99e-20 82.0
Msa1080980 MtrunA17_Chr4g0001331 43.810 105 53 4 125 227 181 281 1.50e-17 81.6
Msa1080980 MtrunA17_Chr6g0453681 45.000 100 49 3 125 222 178 273 1.18e-16 79.3
Msa1080980 MtrunA17_Chr6g0468751 45.918 98 47 3 125 220 178 271 1.49e-16 79.0
Msa1080980 MtrunA17_Chr8g0338741 35.938 128 73 4 108 234 236 355 2.08e-16 78.2
Msa1080980 MtrunA17_Chr4g0008561 33.600 125 77 4 109 231 167 287 2.20e-15 75.5
Msa1080980 MtrunA17_Chr7g0234641 39.344 122 65 3 103 220 218 334 4.06e-15 74.3
Msa1080980 MtrunA17_Chr3g0132671 39.815 108 59 3 117 222 200 303 5.50e-15 74.3
Msa1080980 MtrunA17_Chr4g0069301 40.816 98 52 3 125 220 188 281 1.72e-14 72.8
Msa1080980 MtrunA17_Chr3g0140631 36.082 97 59 2 125 220 194 288 2.11e-14 71.6
Msa1080980 MtrunA17_Chr6g0453671 38.532 109 59 4 117 222 170 273 2.77e-14 71.6
Msa1080980 MtrunA17_Chr2g0333821 36.190 105 61 3 125 227 175 275 4.39e-14 71.6
Msa1080980 MtrunA17_Chr6g0478601 30.556 180 109 6 52 220 226 400 8.33e-14 70.9
Msa1080980 MtrunA17_Chr5g0428981 37.931 116 66 4 109 220 938 1051 1.09e-13 70.9
Msa1080980 MtrunA17_Chr5g0441011 39.604 101 55 4 125 223 175 271 1.19e-13 70.1
Msa1080980 MtrunA17_Chr4g0018201 37.500 120 61 5 109 220 934 1047 1.40e-13 70.5
Msa1080980 MtrunA17_Chr7g0266031 31.387 137 83 4 93 220 692 826 1.51e-13 70.1
Msa1080980 MtrunA17_Chr6g0449401 31.884 138 81 4 95 221 499 634 2.03e-13 69.7
Msa1080980 MtrunA17_Chr1g0179101 36.538 104 59 3 123 221 704 805 2.04e-13 69.7
Msa1080980 MtrunA17_Chr4g0063881 38.889 108 60 4 114 219 160 263 6.35e-13 68.2
Msa1080980 MtrunA17_Chr7g0244561 34.862 109 65 3 125 231 179 283 7.97e-13 67.8
Msa1080980 MtrunA17_Chr8g0353621 31.959 97 63 2 125 220 167 261 8.29e-13 66.6
Msa1080980 MtrunA17_Chr8g0351491 33.333 99 59 3 125 220 173 267 9.02e-13 66.6
Msa1080980 MtrunA17_Chr3g0131061 35.644 101 61 2 124 220 160 260 9.28e-13 67.4
Msa1080980 MtrunA17_Chr2g0284011 37.755 98 55 4 125 220 173 266 2.03e-12 66.6
Msa1080980 MtrunA17_Chr8g0356291 35.922 103 59 3 123 220 361 461 2.64e-12 66.2
Msa1080980 MtrunA17_Chr7g0227331 34.951 103 60 3 123 220 472 572 3.02e-12 66.2
Msa1080980 MtrunA17_Chr1g0150321 39.394 99 54 3 125 221 174 268 3.15e-12 65.9
Msa1080980 MtrunA17_Chr3g0125381 30.088 113 72 3 111 220 98 206 3.32e-12 64.3
Msa1080980 MtrunA17_Chr2g0285711 34.615 104 62 3 123 220 305 408 3.34e-12 65.9
Msa1080980 MtrunA17_Chr2g0309421 36.893 103 58 3 123 220 409 509 3.49e-12 65.9
Msa1080980 MtrunA17_Chr7g0244521 36.735 98 56 2 125 220 173 266 3.74e-12 65.9
Msa1080980 MtrunA17_Chr8g0385281 35.644 101 61 2 124 220 161 261 8.83e-12 64.3
Msa1080980 MtrunA17_Chr5g0399911 36.634 101 60 2 124 220 175 275 9.63e-12 64.3
Msa1080980 MtrunA17_Chr8g0380661 33.019 106 65 3 123 223 156 260 9.95e-12 63.9
Msa1080980 MtrunA17_Chr2g0277501 35.644 101 61 2 124 220 160 260 1.09e-11 63.9
Msa1080980 MtrunA17_Chr8g0381821 35.644 101 61 2 124 220 160 260 2.49e-11 62.8
Msa1080980 MtrunA17_Chr8g0345801 33.913 115 70 4 94 205 147 258 3.85e-11 62.0
Msa1080980 MtrunA17_Chr2g0326531 31.193 109 65 4 125 231 287 387 4.20e-11 62.4
Msa1080980 MtrunA17_Chr3g0080101 33.010 103 62 3 123 220 651 751 4.64e-11 62.8
Msa1080980 MtrunA17_Chr1g0205421 34.694 98 58 3 125 220 173 266 4.75e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1080980 AT5G04870.1 73.239 142 38 0 120 261 308 449 2.00e-70 228
Msa1080980 AT3G10660.2 66.250 160 54 0 102 261 326 485 2.64e-70 228
Msa1080980 AT3G10660.1 66.250 160 54 0 102 261 326 485 2.64e-70 228
Msa1080980 AT4G23650.1 69.065 139 43 0 117 255 233 371 5.69e-66 214
Msa1080980 AT5G23580.1 70.504 139 41 0 117 255 177 315 3.55e-65 211
Msa1080980 AT2G35890.2 66.187 139 47 0 117 255 287 425 1.36e-64 210
Msa1080980 AT2G35890.1 66.187 139 47 0 117 255 287 425 1.36e-64 210
Msa1080980 AT2G38910.1 63.522 159 58 0 103 261 275 433 3.66e-64 210
Msa1080980 AT5G12180.1 67.626 139 45 0 117 255 228 366 5.95e-64 209
Msa1080980 AT4G04720.2 58.286 175 72 1 87 261 205 378 2.33e-63 207
Msa1080980 AT4G04720.1 58.286 175 72 1 87 261 205 378 2.33e-63 207
Msa1080980 AT4G09570.1 68.345 139 44 0 117 255 180 318 4.10e-63 206
Msa1080980 AT5G19360.1 66.187 139 47 0 117 255 223 361 1.15e-62 205
Msa1080980 AT4G35310.2 66.897 145 48 0 117 261 252 396 1.56e-62 206
Msa1080980 AT4G35310.1 66.897 145 48 0 117 261 252 396 1.56e-62 206
Msa1080980 AT4G21940.3 55.429 175 77 1 87 261 227 400 2.01e-62 204
Msa1080980 AT1G35670.1 67.626 139 45 0 117 255 181 319 2.46e-62 204
Msa1080980 AT2G17290.1 66.897 145 48 0 117 261 240 384 6.08e-62 204
Msa1080980 AT2G17290.2 66.897 145 48 0 117 261 240 384 6.08e-62 204
Msa1080980 AT4G21940.1 55.429 175 77 1 87 261 227 400 9.23e-62 203
Msa1080980 AT4G38230.1 61.006 159 62 0 103 261 21 179 1.06e-61 197
Msa1080980 AT4G21940.2 55.429 175 77 1 87 261 227 400 1.21e-61 203
Msa1080980 AT1G50700.3 64.029 139 50 0 117 255 228 366 1.91e-60 198
Msa1080980 AT4G38230.4 64.828 145 51 0 117 261 179 323 2.63e-60 198
Msa1080980 AT4G38230.3 64.828 145 51 0 117 261 179 323 2.63e-60 198
Msa1080980 AT4G38230.2 64.828 145 51 0 117 261 209 353 3.96e-60 198
Msa1080980 AT1G50700.1 64.029 139 50 0 117 255 228 366 5.08e-60 198
Msa1080980 AT1G61950.1 64.493 138 49 0 117 254 254 391 1.13e-59 198
Msa1080980 AT1G50700.2 64.029 139 50 0 117 255 228 366 1.17e-59 198
Msa1080980 AT3G20410.2 62.590 139 52 0 117 255 246 384 1.33e-58 195
Msa1080980 AT3G20410.1 62.590 139 52 0 117 255 246 384 1.33e-58 195
Msa1080980 AT4G04740.2 53.714 175 80 1 87 261 194 367 4.25e-58 193
Msa1080980 AT4G04740.4 53.714 175 80 1 87 261 194 367 4.88e-58 193
Msa1080980 AT4G04740.6 53.714 175 80 1 87 261 194 367 4.88e-58 193
Msa1080980 AT4G04740.5 53.714 175 80 1 87 261 194 367 4.88e-58 193
Msa1080980 AT4G04740.3 53.714 175 80 1 87 261 194 367 4.88e-58 193
Msa1080980 AT4G04740.1 53.714 175 80 1 87 261 194 367 4.88e-58 193
Msa1080980 AT4G04740.7 53.714 175 80 1 87 261 194 367 4.88e-58 193
Msa1080980 AT1G76040.1 60.714 140 54 1 116 255 28 166 1.57e-57 186
Msa1080980 AT1G76040.4 60.714 140 54 1 116 255 28 166 1.57e-57 186
Msa1080980 AT1G76040.3 61.151 139 53 1 117 255 267 404 1.10e-55 186
Msa1080980 AT1G76040.2 61.151 139 53 1 117 255 267 404 3.25e-55 186
Msa1080980 AT3G51850.3 58.993 139 57 0 117 255 209 347 3.50e-55 183
Msa1080980 AT3G51850.2 58.993 139 57 0 117 255 209 347 3.71e-54 182
Msa1080980 AT3G51850.1 58.993 139 57 0 117 255 209 347 5.39e-54 182
Msa1080980 AT3G57530.2 56.115 139 61 0 117 255 218 356 5.31e-53 177
Msa1080980 AT5G12480.2 54.140 157 72 0 99 255 102 258 7.11e-53 177
Msa1080980 AT1G18890.1 60.432 139 55 0 117 255 218 356 9.51e-53 179
Msa1080980 AT3G57530.1 56.115 139 61 0 117 255 218 356 2.31e-52 178
Msa1080980 AT1G74740.1 46.078 204 84 1 52 255 175 352 4.13e-52 178
Msa1080980 AT5G19450.2 44.608 204 87 1 52 255 173 350 4.14e-52 177
Msa1080980 AT5G19450.1 44.608 204 87 1 52 255 173 350 4.14e-52 177
Msa1080980 AT5G12480.1 58.273 139 58 0 117 255 214 352 7.37e-52 177
Msa1080980 AT2G41860.1 43.137 204 90 1 52 255 170 347 2.19e-50 173
Msa1080980 AT2G41860.2 42.647 204 91 1 52 255 170 347 7.36e-50 171
Msa1080980 AT4G04695.1 56.115 139 60 1 117 255 187 324 3.91e-48 166
Msa1080980 AT2G17890.1 54.348 138 63 0 117 254 265 402 3.74e-47 165
Msa1080980 AT5G66210.6 53.623 138 64 0 117 254 219 356 9.45e-47 161
Msa1080980 AT5G66210.4 53.623 138 64 0 117 254 219 356 9.45e-47 161
Msa1080980 AT5G66210.5 53.623 138 64 0 117 254 219 356 1.63e-46 162
Msa1080980 AT5G66210.3 53.623 138 64 0 117 254 219 356 1.70e-46 162
Msa1080980 AT5G66210.1 53.623 138 64 0 117 254 219 356 3.51e-46 162
Msa1080980 AT5G66210.2 53.623 138 64 0 117 254 219 356 3.51e-46 162
Msa1080980 AT2G31500.1 44.970 169 93 0 87 255 191 359 5.87e-46 162
Msa1080980 AT4G04700.1 51.449 138 66 1 117 254 187 323 2.81e-44 156
Msa1080980 AT4G36070.1 49.655 145 73 0 117 261 228 372 3.17e-44 157
Msa1080980 AT4G04710.3 48.521 169 79 2 87 255 151 311 5.08e-44 155
Msa1080980 AT4G04710.2 48.521 169 79 2 87 255 165 325 5.94e-44 155
Msa1080980 AT4G36070.2 50.000 144 72 0 117 260 228 371 7.03e-44 156
Msa1080980 AT4G04710.1 47.159 176 84 2 87 255 165 338 8.77e-44 155
Msa1080980 AT4G04710.4 47.159 176 84 2 87 255 165 338 9.33e-44 155
Msa1080980 AT3G50530.2 36.444 225 117 5 52 261 268 481 3.69e-39 144
Msa1080980 AT3G50530.1 40.571 175 103 1 87 261 277 450 7.20e-38 140
Msa1080980 AT1G49580.1 45.985 137 74 0 118 254 310 446 1.57e-36 136
Msa1080980 AT3G19100.1 41.714 175 101 1 87 261 273 446 5.08e-36 135
Msa1080980 AT5G24430.1 44.056 143 78 1 118 260 303 443 6.27e-35 132
Msa1080980 AT3G49370.1 45.255 137 73 1 118 254 302 436 1.02e-34 131
Msa1080980 AT2G41140.1 44.444 144 79 1 118 261 283 425 1.31e-33 128
Msa1080980 AT3G56760.1 44.444 144 79 1 118 261 284 426 1.55e-33 128
Msa1080980 AT2G46700.2 45.600 125 66 1 118 242 122 244 7.65e-32 121
Msa1080980 AT2G46700.3 45.600 125 66 1 118 242 122 244 7.65e-32 121
Msa1080980 AT2G46700.1 45.600 125 66 1 118 242 303 425 2.27e-31 122
Msa1080980 AT1G12580.1 51.429 105 51 0 117 221 199 303 2.43e-31 121
Msa1080980 AT1G08650.1 46.789 109 57 1 117 224 169 277 1.94e-29 112
Msa1080980 AT1G12680.1 48.077 104 54 0 117 220 252 355 6.02e-27 108
Msa1080980 AT3G04530.1 45.283 106 57 1 116 220 164 269 8.69e-26 102
Msa1080980 AT1G08650.2 46.535 101 53 1 117 216 169 269 2.04e-25 101
Msa1080980 AT5G39440.1 44.792 96 48 2 125 219 178 269 4.93e-18 83.6
Msa1080980 AT3G01090.2 46.939 98 46 3 125 220 201 294 3.34e-17 81.3
Msa1080980 AT3G01090.3 46.939 98 46 3 125 220 178 271 3.64e-17 81.3
Msa1080980 AT3G01090.1 46.939 98 46 3 125 220 178 271 3.64e-17 81.3
Msa1080980 AT3G29160.3 47.423 97 45 3 125 219 179 271 1.81e-16 78.6
Msa1080980 AT3G29160.1 46.939 98 46 3 125 220 179 272 2.95e-16 78.6
Msa1080980 AT3G29160.2 46.939 98 46 3 125 220 179 272 2.95e-16 78.6
Msa1080980 AT1G45160.2 39.048 105 51 4 124 220 856 955 1.17e-15 77.0
Msa1080980 AT1G30270.1 40.000 115 58 5 125 232 193 303 1.41e-15 76.3
Msa1080980 AT3G61960.1 34.959 123 75 3 109 229 158 277 1.42e-15 76.6
Msa1080980 AT3G61960.2 34.959 123 75 3 109 229 158 277 1.52e-15 76.3
Msa1080980 AT1G45160.1 39.048 105 51 4 124 220 856 955 1.53e-15 76.6
Msa1080980 AT1G30270.3 40.000 115 58 5 125 232 96 206 1.74e-15 75.9
Msa1080980 AT1G30270.2 40.000 115 58 5 125 232 193 303 1.96e-15 75.9
Msa1080980 AT3G25250.1 36.111 108 63 2 115 221 228 330 3.27e-15 75.1
Msa1080980 AT2G25880.2 36.082 97 59 2 125 220 150 244 1.22e-14 72.0
Msa1080980 AT2G25880.1 36.082 97 59 2 125 220 182 276 1.96e-14 72.0
Msa1080980 AT3G20830.1 34.127 126 76 3 89 213 211 330 2.13e-14 72.8
Msa1080980 AT2G25880.4 36.082 97 59 2 125 220 195 289 2.90e-14 71.6
Msa1080980 AT4G30960.1 41.837 98 51 4 125 220 185 278 3.24e-14 72.4
Msa1080980 AT3G17850.1 38.235 102 50 4 124 217 1072 1168 5.10e-14 72.0
Msa1080980 AT2G25880.3 35.052 97 60 2 125 220 243 337 5.46e-14 71.2
Msa1080980 AT1G48490.3 28.333 180 107 6 52 220 943 1111 5.82e-14 72.0
Msa1080980 AT1G48490.2 28.333 180 107 6 52 220 943 1111 5.82e-14 72.0
Msa1080980 AT1G48490.1 28.333 180 107 6 52 220 943 1111 5.82e-14 72.0
Msa1080980 AT1G48490.4 28.333 180 107 6 52 220 944 1112 5.82e-14 72.0
Msa1080980 AT5G62310.1 39.785 93 46 3 124 211 944 1031 9.62e-14 71.2
Msa1080980 AT4G13000.1 37.963 108 57 3 116 220 222 322 1.12e-13 70.5
Msa1080980 AT2G45490.1 32.990 97 62 2 125 220 179 273 1.25e-13 69.7
Msa1080980 AT4G32830.1 36.082 97 59 2 125 220 188 282 1.82e-13 69.3
Msa1080980 AT5G45820.1 37.755 98 55 4 125 220 173 266 5.28e-13 68.6
Msa1080980 AT5G21326.1 39.796 98 53 4 125 220 175 268 6.07e-13 68.6
Msa1080980 AT5G01810.3 38.776 98 54 4 125 220 173 266 6.89e-13 68.2
Msa1080980 AT5G10930.1 35.238 105 62 4 125 227 174 274 7.97e-13 68.2
Msa1080980 AT5G01810.1 38.776 98 54 4 125 220 173 266 7.99e-13 68.2
Msa1080980 AT5G01810.2 38.776 98 54 4 125 220 173 266 7.99e-13 68.2
Msa1080980 AT2G26980.4 38.614 101 56 4 125 223 186 282 8.59e-13 68.2
Msa1080980 AT2G26980.3 38.614 101 56 4 125 223 176 272 9.28e-13 67.8
Msa1080980 AT2G26980.1 38.614 101 56 4 125 223 176 272 1.22e-12 67.4
Msa1080980 AT1G48260.2 40.196 102 53 4 125 223 88 184 1.57e-12 67.0
Msa1080980 AT1G48260.4 40.196 102 53 4 125 223 88 184 1.57e-12 67.0
Msa1080980 AT1G48260.3 40.196 102 53 4 125 223 88 184 1.57e-12 67.0
Msa1080980 AT1G48260.5 40.196 102 53 4 125 223 88 184 1.57e-12 67.0
Msa1080980 AT3G52890.2 35.922 103 59 3 123 220 779 879 1.60e-12 67.8
Msa1080980 AT3G52890.4 35.922 103 59 3 123 220 779 879 1.60e-12 67.8
Msa1080980 AT3G52890.1 35.922 103 59 3 123 220 779 879 1.60e-12 67.8
Msa1080980 AT3G52890.3 35.922 103 59 3 123 220 779 879 1.60e-12 67.8
Msa1080980 AT2G26980.5 38.614 101 56 4 125 223 176 272 1.72e-12 67.0
Msa1080980 AT5G03640.2 34.951 103 60 3 123 220 778 878 1.93e-12 67.4
Msa1080980 AT5G03640.1 34.951 103 60 3 123 220 778 878 1.93e-12 67.4
Msa1080980 AT1G16440.1 35.922 103 59 3 123 220 336 436 2.57e-12 66.6
Msa1080980 AT1G01140.2 37.755 98 57 3 125 220 181 276 2.80e-12 66.6
Msa1080980 AT2G25090.1 36.364 99 57 4 125 221 185 279 4.89e-12 65.9
Msa1080980 AT5G25110.1 35.354 99 58 4 125 221 204 298 6.19e-12 65.5
Msa1080980 AT5G55910.2 33.028 109 66 3 117 220 340 446 7.60e-12 65.5
Msa1080980 AT5G55910.1 33.028 109 66 3 117 220 340 446 7.60e-12 65.5
Msa1080980 AT1G01140.1 37.755 98 55 4 125 220 181 274 7.98e-12 65.1
Msa1080980 AT1G60940.1 35.644 101 61 2 124 220 160 260 8.23e-12 64.7
Msa1080980 AT1G60940.2 35.644 101 61 2 124 220 160 260 8.23e-12 64.7
Msa1080980 AT1G01140.3 37.755 98 55 4 125 220 181 274 8.49e-12 65.1
Msa1080980 AT2G34180.1 36.000 100 58 3 123 220 216 311 8.62e-12 65.1
Msa1080980 AT2G44830.2 33.981 103 61 3 123 220 597 697 1.07e-11 65.1
Msa1080980 AT2G44830.3 33.981 103 61 3 123 220 597 697 1.07e-11 65.1
Msa1080980 AT2G44830.1 33.981 103 61 3 123 220 597 697 1.07e-11 65.1
Msa1080980 AT2G20050.2 32.500 120 68 5 110 221 922 1036 1.11e-11 65.1
Msa1080980 AT2G30360.1 33.654 104 63 3 123 224 182 281 1.12e-11 64.7
Msa1080980 AT2G20050.1 32.500 120 68 5 110 221 925 1039 1.25e-11 65.1
Msa1080980 AT5G58140.6 31.967 122 69 5 123 233 764 882 1.25e-11 65.1
Msa1080980 AT5G58140.7 31.967 122 69 5 123 233 764 882 1.25e-11 65.1
Msa1080980 AT5G58140.5 31.967 122 69 5 123 233 764 882 1.25e-11 65.1
Msa1080980 AT5G58140.2 31.967 122 69 5 123 233 764 882 1.25e-11 65.1
Msa1080980 AT5G58140.1 31.967 122 69 5 123 233 764 882 1.25e-11 65.1
Msa1080980 AT3G44610.1 27.778 144 85 6 83 220 283 413 1.67e-11 64.3
Msa1080980 AT1G29230.1 36.000 100 58 4 123 220 233 328 1.82e-11 64.3
Msa1080980 AT5G08590.2 36.000 100 60 2 124 219 84 183 2.88e-11 62.8
Msa1080980 AT3G17510.2 34.862 109 62 5 125 230 102 204 2.92e-11 63.2
Msa1080980 AT5G08590.1 36.000 100 60 2 124 219 160 259 3.12e-11 63.2
Msa1080980 AT3G17510.1 34.862 109 62 5 125 230 182 284 3.65e-11 63.2
Msa1080980 AT4G26610.1 33.981 103 61 3 123 220 356 456 4.03e-11 63.2
Msa1080980 AT3G63280.2 32.039 103 64 3 121 221 161 259 4.37e-11 63.2
Msa1080980 AT3G63280.3 32.039 103 64 3 121 221 161 259 4.37e-11 63.2
Msa1080980 AT3G63280.1 32.039 103 64 3 121 221 161 259 4.37e-11 63.2
Msa1080980 AT3G63280.4 32.039 103 64 3 121 221 215 313 5.82e-11 62.8
Msa1080980 AT4G40010.1 37.624 101 59 2 124 220 160 260 8.41e-11 62.0

Find 35 sgRNAs with CRISPR-Local

Find 163 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTATCTTACCACCATAAA+AGG 0.264667 7_2:-80705216 None:intergenic
CATCTTCTTAACCAAGTCTT+TGG 0.272128 7_2:-80705411 None:intergenic
TCATGTTCATAGGTTCTTCT+AGG 0.302163 7_2:-80703378 None:intergenic
GAAATTTGTGTTTGGTTGAT+TGG 0.324018 7_2:-80703438 None:intergenic
TATGAACAAGCTCAAGAAAA+TGG 0.325303 7_2:+80705771 Msa1080980:CDS
TATGTTGCACCTGAGGTTAT+AGG 0.363606 7_2:+80705119 Msa1080980:CDS
GCACTCCACACATCAGCTTC+TGG 0.365657 7_2:-80705155 None:intergenic
TTGAAAACTTTCATGTTCAT+AGG 0.366385 7_2:-80703388 None:intergenic
CAATCTTCTTAGGTCACCCT+TGG 0.387670 7_2:+80705674 Msa1080980:intron
TTGATTTCTGTTCCGATCCT+TGG 0.390359 7_2:+80705369 Msa1080980:CDS
GCAGAATCAAGAGGCATGTC+TGG 0.392158 7_2:-80705718 None:intergenic
AGGTTATAGGAGAGTGTTAT+GGG 0.395485 7_2:+80705132 Msa1080980:CDS
CACCCTTGGATTCACGTTGA+TGG 0.404489 7_2:+80705688 Msa1080980:CDS
GAGAAACTGAAATTTGTGTT+TGG 0.437529 7_2:-80703446 None:intergenic
GAGGTTATAGGAGAGTGTTA+TGG 0.453158 7_2:+80705131 Msa1080980:CDS
TTGGCACTTTCAGATATACT+TGG 0.477703 7_2:-80705392 None:intergenic
ATCATATACATTCTCTTATG+TGG 0.479422 7_2:+80705185 Msa1080980:CDS
GAAGCTGATGTGTGGAGTGC+AGG 0.497133 7_2:+80705158 Msa1080980:CDS
AGAACCAGTTACGCAGTTGA+AGG 0.501410 7_2:+80703599 Msa1080980:CDS
ATCTGAAAGTGCCAAAGACT+TGG 0.522246 7_2:+80705400 Msa1080980:CDS
GTTATCTTACCACCATAAAA+GGG 0.528674 7_2:-80705215 None:intergenic
TGCTTATTATGTTGCACCTG+AGG 0.533305 7_2:+80705112 Msa1080980:CDS
AACATGGGAAACAATTGTGT+TGG 0.533476 7_2:+80703354 None:intergenic
ACTCCATCAACGTGAATCCA+AGG 0.539220 7_2:-80705691 None:intergenic
AGATAGTCATGTGATAGAAA+AGG 0.550533 7_2:-80705809 None:intergenic
AGATATACTTGGCCAAGGAT+CGG 0.554529 7_2:-80705381 None:intergenic
CTTTCAGATATACTTGGCCA+AGG 0.583093 7_2:-80705386 None:intergenic
TAACACTCTCCTATAACCTC+AGG 0.583558 7_2:-80705128 None:intergenic
GAAGCAGTATTAGACTGAAG+TGG 0.595420 7_2:-80703543 None:intergenic
GGATCAAGAGATATTTGATG+AGG 0.596050 7_2:+80705331 Msa1080980:CDS
CTCAAAGTTGCAGAATCAAG+AGG 0.615351 7_2:-80705727 None:intergenic
TGGTTGATTGGATATGACCA+TGG 0.642092 7_2:-80703426 None:intergenic
CTCCATCAACGTGAATCCAA+GGG 0.650421 7_2:-80705690 None:intergenic
ATCTTACCACCATAAAAGGG+AGG 0.680662 7_2:-80705212 None:intergenic
ATGGGCCAGAAGCTGATGTG+TGG 0.691272 7_2:+80705150 Msa1080980:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTTGAAAAATATTAATATT+AGG + chr7_2:80703661-80703680 Msa1080980:CDS 10.0%
!! TATTATATGAAACAAAAAAA+GGG - chr7_2:80705274-80705293 None:intergenic 10.0%
!! TTATTATATGAAACAAAAAA+AGG - chr7_2:80705275-80705294 None:intergenic 10.0%
!! TGAAAAATATTAATATTAGG+AGG + chr7_2:80703664-80703683 Msa1080980:CDS 15.0%
!! GAAAAATATTAATATTAGGA+GGG + chr7_2:80703665-80703684 Msa1080980:CDS 15.0%
!!! GATACAATTTTTTGAAAAAA+AGG + chr7_2:80704817-80704836 Msa1080980:intron 15.0%
!! TATAATAAAAAAAAGAAGAC+GGG - chr7_2:80705006-80705025 None:intergenic 15.0%
!! GTATAATAAAAAAAAGAAGA+CGG - chr7_2:80705007-80705026 None:intergenic 15.0%
!!! TTTTTTATTATACCTACTAT+TGG + chr7_2:80705014-80705033 Msa1080980:intron 15.0%
!! TTTGTTTCATATAATAATAG+AGG + chr7_2:80705278-80705297 Msa1080980:intron 15.0%
!! AACTTATAAAATTCCCTAAA+AGG - chr7_2:80703747-80703766 None:intergenic 20.0%
!!! TTTAGGGAATTTTATAAGTT+AGG + chr7_2:80703747-80703766 Msa1080980:intron 20.0%
!!! CTCTAAACAATTTTACTTTT+GGG - chr7_2:80703857-80703876 None:intergenic 20.0%
!!! TCTCTAAACAATTTTACTTT+TGG - chr7_2:80703858-80703877 None:intergenic 20.0%
!!! ATTGGTAATTTGGTATAAAT+TGG - chr7_2:80704249-80704268 None:intergenic 20.0%
!! AAGTAGTCATTCATAAAATT+TGG + chr7_2:80704406-80704425 Msa1080980:intron 20.0%
!! AGTAGTCATTCATAAAATTT+GGG + chr7_2:80704407-80704426 Msa1080980:intron 20.0%
!!! AAATCTTTTTAATCATTAGC+AGG + chr7_2:80704670-80704689 Msa1080980:intron 20.0%
!!! TAGTTTTAAGAGATTCATAT+AGG - chr7_2:80704907-80704926 None:intergenic 20.0%
!! ATAATAAAAAAAAGAAGACG+GGG - chr7_2:80705005-80705024 None:intergenic 20.0%
!!! GAAAAATTTAGTGATTTTGT+CGG + chr7_2:80705086-80705105 Msa1080980:CDS 20.0%
!! AAAAGATAAAGAAAAAACAG+TGG - chr7_2:80705493-80705512 None:intergenic 20.0%
! TTGAAAACTTTCATGTTCAT+AGG - chr7_2:80703391-80703410 None:intergenic 25.0%
!!! AAAGTTTTCAAGCTTCATTT+TGG + chr7_2:80703400-80703419 Msa1080980:CDS 25.0%
!! CCTTTTATTGATATCACATT+CGG - chr7_2:80703939-80703958 None:intergenic 25.0%
! ATGACAATATAAACAACTAC+CGG - chr7_2:80703975-80703994 None:intergenic 25.0%
!! TCAACAAAAAGGAAATTTTC+AGG - chr7_2:80704143-80704162 None:intergenic 25.0%
!! GAAAATTTCCTTTTTGTTGA+TGG + chr7_2:80704143-80704162 Msa1080980:intron 25.0%
! ATTTGGTATAAATTGGAGAA+GGG - chr7_2:80704242-80704261 None:intergenic 25.0%
! AATTTGGTATAAATTGGAGA+AGG - chr7_2:80704243-80704262 None:intergenic 25.0%
!! ATGGATATAGATTGGTAATT+TGG - chr7_2:80704259-80704278 None:intergenic 25.0%
! AAAGAACAATGGATATAGAT+TGG - chr7_2:80704267-80704286 None:intergenic 25.0%
!!! GTTTAATTACTTTTTTTCCC+CGG + chr7_2:80704330-80704349 Msa1080980:intron 25.0%
! AAGTAGTTATGCTTAAAAGT+TGG + chr7_2:80704443-80704462 Msa1080980:intron 25.0%
! AGTAGTTATGCTTAAAAGTT+GGG + chr7_2:80704444-80704463 Msa1080980:intron 25.0%
! TGGGTTAACATTTAATAAAC+CGG + chr7_2:80704463-80704482 Msa1080980:intron 25.0%
! AAGACATAAAGTATGGTTAT+AGG - chr7_2:80704513-80704532 None:intergenic 25.0%
! ATGAGATAAGACATAAAGTA+TGG - chr7_2:80704520-80704539 None:intergenic 25.0%
!! TAGTCAAAACCATATCTTTT+CGG + chr7_2:80704746-80704765 Msa1080980:intron 25.0%
! TAGACAAATTAGGATGAATA+AGG + chr7_2:80704780-80704799 Msa1080980:intron 25.0%
!! ACTAACAATCTTCTTTTACA+GGG + chr7_2:80705063-80705082 Msa1080980:intron 25.0%
! ATCATATACATTCTCTTATG+TGG + chr7_2:80705185-80705204 Msa1080980:CDS 25.0%
!!! AGGATTTTGATTATGTTCTT+TGG + chr7_2:80705298-80705317 Msa1080980:intron 25.0%
!! ATGTTCTTTGGTAATAGAAT+TGG + chr7_2:80705310-80705329 Msa1080980:intron 25.0%
!! ATATTTGATGAGGTTTTACA+AGG + chr7_2:80705341-80705360 Msa1080980:CDS 25.0%
!!! CTAGTGCTTTTAATTGTTTA+TGG + chr7_2:80705571-80705590 Msa1080980:intron 25.0%
GAAATTTGTGTTTGGTTGAT+TGG - chr7_2:80703441-80703460 None:intergenic 30.0%
GAGAAACTGAAATTTGTGTT+TGG - chr7_2:80703449-80703468 None:intergenic 30.0%
! TTCTCAATTTTGTGAACATG+TGG - chr7_2:80703510-80703529 None:intergenic 30.0%
TATAAGTTAGGAGATGAACT+TGG + chr7_2:80703759-80703778 Msa1080980:intron 30.0%
ATAAGTTAGGAGATGAACTT+GGG + chr7_2:80703760-80703779 Msa1080980:intron 30.0%
GTTTAGAGAGAATGATATAG+AGG + chr7_2:80703869-80703888 Msa1080980:intron 30.0%
GATTGAAATAATGCATCACT+TGG + chr7_2:80703905-80703924 Msa1080980:intron 30.0%
AAATAATGCATCACTTGGTT+GGG + chr7_2:80703910-80703929 Msa1080980:intron 30.0%
CCGAATGTGATATCAATAAA+AGG + chr7_2:80703936-80703955 Msa1080980:intron 30.0%
GGTAGTTGTTTATATTGTCA+TGG + chr7_2:80703974-80703993 Msa1080980:intron 30.0%
ATTGTCATGGAATTATGTGA+AGG + chr7_2:80703987-80704006 Msa1080980:intron 30.0%
AACGATTGTTAATGTTGTTG+AGG + chr7_2:80704079-80704098 Msa1080980:intron 30.0%
AAAATCAATTGCCTTAAGAC+TGG - chr7_2:80704180-80704199 None:intergenic 30.0%
!! AGTCTTAAGGCAATTGATTT+TGG + chr7_2:80704179-80704198 Msa1080980:intron 30.0%
TTTGGTATAAATTGGAGAAG+GGG - chr7_2:80704241-80704260 None:intergenic 30.0%
! GTGAGTTTCAATTCATTTTC+TGG + chr7_2:80704289-80704308 Msa1080980:intron 30.0%
! ATTGTATGAGACATTTTACC+GGG - chr7_2:80704351-80704370 None:intergenic 30.0%
! GATTGTATGAGACATTTTAC+CGG - chr7_2:80704352-80704371 None:intergenic 30.0%
TGTCTTATCTCATTCAATGT+TGG + chr7_2:80704527-80704546 Msa1080980:intron 30.0%
!! ATCATCAAGTCATTGCTTTT+GGG - chr7_2:80704600-80704619 None:intergenic 30.0%
!!! AAAGATATGGTTTTGACTAG+AGG - chr7_2:80704745-80704764 None:intergenic 30.0%
CAAATTAGGATGAATAAGGA+TGG + chr7_2:80704784-80704803 Msa1080980:intron 30.0%
!! TTTGGAAGGTATTAACAACT+AGG - chr7_2:80704947-80704966 None:intergenic 30.0%
AATCACTCATGGAATAATCA+CGG + chr7_2:80704976-80704995 Msa1080980:intron 30.0%
ATGATCATTACACCAATAGT+AGG - chr7_2:80705029-80705048 None:intergenic 30.0%
! GACTAACAATCTTCTTTTAC+AGG + chr7_2:80705062-80705081 Msa1080980:intron 30.0%
! CTAACAATCTTCTTTTACAG+GGG + chr7_2:80705064-80705083 Msa1080980:intron 30.0%
GTTATCTTACCACCATAAAA+GGG - chr7_2:80705218-80705237 None:intergenic 30.0%
AGTTATCTTACCACCATAAA+AGG - chr7_2:80705219-80705238 None:intergenic 30.0%
TATGAACAAGCTCAAGAAAA+TGG + chr7_2:80705771-80705790 Msa1080980:CDS 30.0%
TCATGTTCATAGGTTCTTCT+AGG - chr7_2:80703381-80703400 None:intergenic 35.0%
!! GTTTTCAAGCTTCATTTTGG+TGG + chr7_2:80703403-80703422 Msa1080980:CDS 35.0%
! CAATTTTGTGAACATGTGGT+GGG - chr7_2:80703506-80703525 None:intergenic 35.0%
! TCAATTTTGTGAACATGTGG+TGG - chr7_2:80703507-80703526 None:intergenic 35.0%
! GTTTTTGCAGCAGATTTTGT+TGG - chr7_2:80703636-80703655 None:intergenic 35.0%
!!! TCGGTTTTGTTGACAAACAA+TGG + chr7_2:80703720-80703739 Msa1080980:intron 35.0%
! TGACAAACAATGGTCCTTTT+AGG + chr7_2:80703730-80703749 Msa1080980:intron 35.0%
! GACAAACAATGGTCCTTTTA+GGG + chr7_2:80703731-80703750 Msa1080980:intron 35.0%
TGGAACTACTTCACTTTGTT+TGG + chr7_2:80703794-80703813 Msa1080980:intron 35.0%
! CTTTGTTTGGAGAAATCAAC+CGG + chr7_2:80703807-80703826 Msa1080980:intron 35.0%
TTTGTTTGGAGAAATCAACC+GGG + chr7_2:80703808-80703827 Msa1080980:intron 35.0%
AGAATGATATAGAGGATGTG+AGG + chr7_2:80703877-80703896 Msa1080980:intron 35.0%
GAAATAATGCATCACTTGGT+TGG + chr7_2:80703909-80703928 Msa1080980:intron 35.0%
AAAAGGAGCTTATGAAGATC+CGG + chr7_2:80703953-80703972 Msa1080980:intron 35.0%
CTTCATCTCCATCAACAAAA+AGG - chr7_2:80704154-80704173 None:intergenic 35.0%
AGATGAAGATTCCAGTCTTA+AGG + chr7_2:80704166-80704185 Msa1080980:intron 35.0%
GAAACTCACGAAAAGAACAA+TGG - chr7_2:80704278-80704297 None:intergenic 35.0%
! TTGTATGAGACATTTTACCG+GGG - chr7_2:80704350-80704369 None:intergenic 35.0%
TGTTGGACTCTTAACATCTT+CGG + chr7_2:80704544-80704563 Msa1080980:intron 35.0%
! CATCATCAAGTCATTGCTTT+TGG - chr7_2:80704601-80704620 None:intergenic 35.0%
! CATATCTTTTCGGATGCAAT+CGG + chr7_2:80704756-80704775 Msa1080980:intron 35.0%
! ATATCTTTTCGGATGCAATC+GGG + chr7_2:80704757-80704776 Msa1080980:intron 35.0%
! TCATATAGGCTTTGACAAGT+TGG - chr7_2:80704893-80704912 None:intergenic 35.0%
GTTAATACCTTCCAAAAGAG+TGG + chr7_2:80704951-80704970 Msa1080980:intron 35.0%
!! AGGTTATAGGAGAGTGTTAT+GGG + chr7_2:80705132-80705151 Msa1080980:CDS 35.0%
GGATCAAGAGATATTTGATG+AGG + chr7_2:80705331-80705350 Msa1080980:CDS 35.0%
TTGGCACTTTCAGATATACT+TGG - chr7_2:80705395-80705414 None:intergenic 35.0%
CATCTTCTTAACCAAGTCTT+TGG - chr7_2:80705414-80705433 None:intergenic 35.0%
! TGTGCAGTAATTCGTGTTTT+AGG - chr7_2:80705449-80705468 None:intergenic 35.0%
GATGATGTTCCAATCTTCTT+AGG + chr7_2:80705664-80705683 Msa1080980:intron 35.0%
TGGTTGATTGGATATGACCA+TGG - chr7_2:80703429-80703448 None:intergenic 40.0%
!!! ATGTGGTGGGTTTTGTTGAT+TGG - chr7_2:80703493-80703512 None:intergenic 40.0%
GAAGCAGTATTAGACTGAAG+TGG - chr7_2:80703546-80703565 None:intergenic 40.0%
! TTTTCCTTCAACTGCGTAAC+TGG - chr7_2:80703606-80703625 None:intergenic 40.0%
TTAGGAGATGAACTTGGGAA+AGG + chr7_2:80703765-80703784 Msa1080980:intron 40.0%
GAACTTGGGAAAGGAAAGTT+TGG + chr7_2:80703774-80703793 Msa1080980:intron 40.0%
ATGATATAGAGGATGTGAGG+AGG + chr7_2:80703880-80703899 Msa1080980:intron 40.0%
TGATATAGAGGATGTGAGGA+GGG + chr7_2:80703881-80703900 Msa1080980:intron 40.0%
GTCATGGAATTATGTGAAGG+AGG + chr7_2:80703990-80704009 Msa1080980:intron 40.0%
TGTTTGATCGGATTGTGGAA+AGG + chr7_2:80704018-80704037 Msa1080980:intron 40.0%
AAGTTTAGCAGCCTTTCTCT+CGG - chr7_2:80704054-80704073 None:intergenic 40.0%
! CAAACCTGGCTTGAAGAAAA+TGG - chr7_2:80704210-80704229 None:intergenic 40.0%
! CATTTTCTTCAAGCCAGGTT+TGG + chr7_2:80704208-80704227 Msa1080980:intron 40.0%
AAGGGGATTATTTCCAAACC+TGG - chr7_2:80704224-80704243 None:intergenic 40.0%
! GTACTCTTCATTTTACGAGC+CGG - chr7_2:80704485-80704504 None:intergenic 40.0%
GTTGGACTCTTAACATCTTC+GGG + chr7_2:80704545-80704564 Msa1080980:intron 40.0%
ACTCTTAACATCTTCGGGAT+TGG + chr7_2:80704550-80704569 Msa1080980:intron 40.0%
CGATTGCATCCGAAAAGATA+TGG - chr7_2:80704758-80704777 None:intergenic 40.0%
TGCAATCGGGTAGACAAATT+AGG + chr7_2:80704770-80704789 Msa1080980:intron 40.0%
! TGATTCACCACTCTTTTGGA+AGG - chr7_2:80704961-80704980 None:intergenic 40.0%
! TGAGTGATTCACCACTCTTT+TGG - chr7_2:80704965-80704984 None:intergenic 40.0%
AAAGAGTGGTGAATCACTCA+TGG + chr7_2:80704965-80704984 Msa1080980:intron 40.0%
TGCTTATTATGTTGCACCTG+AGG + chr7_2:80705112-80705131 Msa1080980:CDS 40.0%
TATGTTGCACCTGAGGTTAT+AGG + chr7_2:80705119-80705138 Msa1080980:CDS 40.0%
TAACACTCTCCTATAACCTC+AGG - chr7_2:80705131-80705150 None:intergenic 40.0%
!! GAGGTTATAGGAGAGTGTTA+TGG + chr7_2:80705131-80705150 Msa1080980:CDS 40.0%
ATCTTACCACCATAAAAGGG+AGG - chr7_2:80705215-80705234 None:intergenic 40.0%
TTGATTTCTGTTCCGATCCT+TGG + chr7_2:80705369-80705388 Msa1080980:CDS 40.0%
AGATATACTTGGCCAAGGAT+CGG - chr7_2:80705384-80705403 None:intergenic 40.0%
CTTTCAGATATACTTGGCCA+AGG - chr7_2:80705389-80705408 None:intergenic 40.0%
!! ATCTGAAAGTGCCAAAGACT+TGG + chr7_2:80705400-80705419 Msa1080980:CDS 40.0%
CTCAAAGTTGCAGAATCAAG+AGG - chr7_2:80705730-80705749 None:intergenic 40.0%
!! AAGCTTCATTTTGGTGGCCA+TGG + chr7_2:80703409-80703428 Msa1080980:CDS 45.0%
AGAACCAGTTACGCAGTTGA+AGG + chr7_2:80703599-80703618 Msa1080980:CDS 45.0%
! AGGGTAACACCAAAAAGTGC+AGG + chr7_2:80703684-80703703 Msa1080980:CDS 45.0%
! ACACCAAAAAGTGCAGGTCT+TGG + chr7_2:80703690-80703709 Msa1080980:intron 45.0%
TTTGCATGCGTATGTCTTCC+CGG - chr7_2:80703829-80703848 None:intergenic 45.0%
AAGGAGGCGAGTTGTTTGAT+CGG + chr7_2:80704006-80704025 Msa1080980:intron 45.0%
CGAGTTGTTTGATCGGATTG+TGG + chr7_2:80704013-80704032 Msa1080980:intron 45.0%
GAGACATTACACCGAGAGAA+AGG + chr7_2:80704040-80704059 Msa1080980:intron 45.0%
! CTGTCCATTTTCTTCAAGCC+AGG + chr7_2:80704203-80704222 Msa1080980:intron 45.0%
CATCTTCGGGATTGGACATT+TGG + chr7_2:80704558-80704577 Msa1080980:intron 45.0%
!!! GTCATTGCTTTTGGGACACT+TGG - chr7_2:80704592-80704611 None:intergenic 45.0%
! TGTGGAACACCTCCCTTTTA+TGG + chr7_2:80705203-80705222 Msa1080980:CDS 45.0%
CAAGGGTGACCTAAGAAGAT+TGG - chr7_2:80705676-80705695 None:intergenic 45.0%
CAATCTTCTTAGGTCACCCT+TGG + chr7_2:80705674-80705693 Msa1080980:intron 45.0%
CTCCATCAACGTGAATCCAA+GGG - chr7_2:80705693-80705712 None:intergenic 45.0%
ACTCCATCAACGTGAATCCA+AGG - chr7_2:80705694-80705713 None:intergenic 45.0%
! GCTCCAAGACCTGCACTTTT+TGG - chr7_2:80703696-80703715 None:intergenic 50.0%
TGCAGGTCTTGGAGCAGAAT+CGG + chr7_2:80703701-80703720 Msa1080980:intron 50.0%
GTTGAGGATTGTCACTCACG+TGG + chr7_2:80704095-80704114 Msa1080980:intron 50.0%
! GGAACACCTCCCTTTTATGG+TGG + chr7_2:80705206-80705225 Msa1080980:CDS 50.0%
CACCCTTGGATTCACGTTGA+TGG + chr7_2:80705688-80705707 Msa1080980:CDS 50.0%
! GCAGAATCAAGAGGCATGTC+TGG - chr7_2:80705721-80705740 None:intergenic 50.0%
ATGGGCCAGAAGCTGATGTG+TGG + chr7_2:80705150-80705169 Msa1080980:CDS 55.0%
GCACTCCACACATCAGCTTC+TGG - chr7_2:80705158-80705177 None:intergenic 55.0%
GAAGCTGATGTGTGGAGTGC+AGG + chr7_2:80705158-80705177 Msa1080980:CDS 55.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 80703357 80705825 80703357 ID=Msa1080980;Name=Msa1080980
chr7_2 mRNA 80703357 80705825 80703357 ID=Msa1080980-mRNA-1;Parent=Msa1080980;Name=Msa1080980-mRNA-1;_AED=0.25;_eAED=0.26;_QI=0|0|0|1|1|1|4|0|261
chr7_2 exon 80703357 80703705 80703357 ID=Msa1080980-mRNA-1:exon:20501;Parent=Msa1080980-mRNA-1
chr7_2 exon 80705084 80705227 80705084 ID=Msa1080980-mRNA-1:exon:20502;Parent=Msa1080980-mRNA-1
chr7_2 exon 80705327 80705479 80705327 ID=Msa1080980-mRNA-1:exon:20503;Parent=Msa1080980-mRNA-1
chr7_2 exon 80705686 80705825 80705686 ID=Msa1080980-mRNA-1:exon:20504;Parent=Msa1080980-mRNA-1
chr7_2 CDS 80703357 80703705 80703357 ID=Msa1080980-mRNA-1:cds;Parent=Msa1080980-mRNA-1
chr7_2 CDS 80705084 80705227 80705084 ID=Msa1080980-mRNA-1:cds;Parent=Msa1080980-mRNA-1
chr7_2 CDS 80705327 80705479 80705327 ID=Msa1080980-mRNA-1:cds;Parent=Msa1080980-mRNA-1
chr7_2 CDS 80705686 80705825 80705686 ID=Msa1080980-mRNA-1:cds;Parent=Msa1080980-mRNA-1
Gene Sequence

>Msa1080980

ATGGGAAACAATTGTGTTGGACCTAGAAGAACCTATGAACATGAAAGTTTTCAAGCTTCATTTTGGTGGCCATGGTCATATCCAATCAACCAAACACAAATTTCAGTTTCTCAAAACTCAAATTCTTCACAAACCAATCAACAAAACCCACCACATGTTCACAAAATTGAGAACAAAGACATTAAGCCACTTCAGTCTAATACTGCTTCAGACAAACAAACTAGCACATCACAAGAAGATGCAGAACCAGTTACGCAGTTGAAGGAAAAAGATACACCAACAAAATCTGCTGCAAAAACAATGATGTTGAAAAATATTAATATTAGGAGGGTAACACCAAAAAGTGCAGGGGAAAAATTTAGTGATTTTGTCGGAAGTGCTTATTATGTTGCACCTGAGGTTATAGGAGAGTGTTATGGGCCAGAAGCTGATGTGTGGAGTGCAGGTGTGATCATATACATTCTCTTATGTGGAACACCTCCCTTTTATGGTGAATTGGATCAAGAGATATTTGATGAGGTTTTACAAGGTGAAGTTGATTTCTGTTCCGATCCTTGGCCAAGTATATCTGAAAGTGCCAAAGACTTGGTTAAGAAGATGCTTGATAGAGATCCTAAAACACGAATTACTGCACATGAAGTTCTAAGTCACCCTTGGATTCACGTTGATGGAGTTGCTCCAGACATGCCTCTTGATTCTGCAACTTTGAGTCGTCTAAAGCAATTTTCTGCTATGAACAAGCTCAAGAAAATGGCTCTTCGAGTTAGTACCTTTTCTATCACATGA
Protein sequence

>Msa1080980

MGNNCVGPRRTYEHESFQASFWWPWSYPINQTQISVSQNSNSSQTNQQNPPHVHKIENKDIKPLQSNTASDKQTSTSQEDAEPVTQLKEKDTPTKSAAKTMMLKNINIRRVTPKSAGEKFSDFVGSAYYVAPEVIGECYGPEADVWSAGVIIYILLCGTPPFYGELDQEIFDEVLQGEVDFCSDPWPSISESAKDLVKKMLDRDPKTRITAHEVLSHPWIHVDGVAPDMPLDSATLSRLKQFSAMNKLKKMALRVSTFSIT*