Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081130 | XP_013450272.2 | 95.969 | 521 | 19 | 2 | 24 | 542 | 1 | 521 | 0.0 | 988 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081130 | sp|Q67XX3|FB252_ARATH | 73.753 | 461 | 114 | 5 | 84 | 542 | 47 | 502 | 0.0 | 702 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081130 | A0A396HD35 | 95.969 | 521 | 19 | 2 | 24 | 542 | 1 | 521 | 0.0 | 988 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1081130 | TR | Jumonji |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081130 | MtrunA17_Chr7g0268031 | 95.969 | 521 | 19 | 2 | 24 | 542 | 1 | 521 | 0.0 | 988 |
| Msa1081130 | MtrunA17_Chr3g0132281 | 39.071 | 366 | 210 | 8 | 111 | 466 | 13 | 375 | 5.89e-73 | 250 |
| Msa1081130 | MtrunA17_Chr3g0117261 | 27.682 | 289 | 146 | 11 | 232 | 466 | 18 | 297 | 2.81e-15 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1081130 | AT5G06550.1 | 73.753 | 461 | 114 | 5 | 84 | 542 | 47 | 502 | 0.0 | 702 |
| Msa1081130 | AT1G78280.1 | 39.566 | 369 | 208 | 9 | 108 | 466 | 5 | 368 | 2.80e-78 | 265 |
| Msa1081130 | AT5G63080.1 | 27.758 | 281 | 155 | 9 | 232 | 473 | 12 | 283 | 3.76e-18 | 87.8 |
Find 150 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGGATTTGTTTGGTGTTT+TGG | 0.172983 | 7_2:-80878869 | Msa1081130:CDS |
| TCTATAATCAGCCGCAAATT+TGG | 0.187726 | 7_2:+80877202 | None:intergenic |
| TTCCAAGCTGAAGTTGAATT+TGG | 0.188370 | 7_2:+80878775 | None:intergenic |
| ATGAAGCTTAAGGACTATTT+TGG | 0.203220 | 7_2:-80879000 | Msa1081130:CDS |
| TCTACCTTTGTTGTTTCTAA+TGG | 0.205554 | 7_2:-80879330 | Msa1081130:CDS |
| GATTATAGGTGGATTATTAT+TGG | 0.211885 | 7_2:-80878832 | Msa1081130:CDS |
| GAATTGGGATAGAGATTATT+TGG | 0.233632 | 7_2:-80879070 | Msa1081130:CDS |
| GTTGATGGGTTTCAGTATAA+TGG | 0.244611 | 7_2:-80879363 | Msa1081130:CDS |
| TGGAAGGGTGTATTGATAAT+TGG | 0.249263 | 7_2:-80879104 | Msa1081130:CDS |
| TGGTAATAGTTTAGGGGTTT+TGG | 0.265190 | 7_2:-80879460 | Msa1081130:CDS |
| TCAAAGGAACACTAGACTTT+AGG | 0.265500 | 7_2:+80877092 | None:intergenic |
| TGTTAGGAAGAGAGGGATTT+CGG | 0.288689 | 7_2:-80879175 | Msa1081130:CDS |
| GAGCTTGTTCTTGATATTCT+AGG | 0.289370 | 7_2:-80879492 | Msa1081130:CDS |
| GGGTACCCTTTGTTTGATAT+CGG | 0.290302 | 7_2:-80879309 | Msa1081130:CDS |
| AGAAGGAAAGTTTCCTTTGC+TGG | 0.297251 | 7_2:+80877314 | None:intergenic |
| GGGAATATTTGGTATCAAAA+TGG | 0.309906 | 7_2:-80879942 | None:intergenic |
| CTACCTTTGTTGTTTCTAAT+GGG | 0.312871 | 7_2:-80879329 | Msa1081130:CDS |
| CAAAGGAACACTAGACTTTA+GGG | 0.316680 | 7_2:+80877093 | None:intergenic |
| ATTGGGATGCATTGAGGAAT+TGG | 0.321571 | 7_2:-80879086 | Msa1081130:CDS |
| TAATGGAAGAAATGGGGTTT+TGG | 0.321890 | 7_2:+80879694 | None:intergenic |
| GAAGAGAGGGATTTCGGTTG+AGG | 0.331066 | 7_2:-80879169 | Msa1081130:CDS |
| TCATATTCCAAACCCAATTT+CGG | 0.340210 | 7_2:+80878910 | None:intergenic |
| GCAAAGGAAACTTTCCTTCT+GGG | 0.341277 | 7_2:-80877311 | Msa1081130:CDS |
| TTTATGGTGCAACAAAGAAT+TGG | 0.346410 | 7_2:-80878624 | Msa1081130:CDS |
| GATAATATTGTTAGGAAGAG+AGG | 0.347047 | 7_2:-80879183 | Msa1081130:CDS |
| AACCATTCAATTATTGAAAC+AGG | 0.349564 | 7_2:+80878655 | None:intergenic |
| AGCAAAGGAAACTTTCCTTC+TGG | 0.361388 | 7_2:-80877312 | Msa1081130:CDS |
| TTGATGGGTTTCAGTATAAT+GGG | 0.365569 | 7_2:-80879362 | Msa1081130:CDS |
| AAAAGTTCCGAAATTGGGTT+TGG | 0.367524 | 7_2:-80878917 | Msa1081130:CDS |
| TATGTATGAATTTCTTTAGA+AGG | 0.368491 | 7_2:+80877249 | None:intergenic |
| AACGCAAGCACACTGGTATC+TGG | 0.370811 | 7_2:-80877442 | Msa1081130:CDS |
| GCCCAGTGGTTGGTGGCATT+TGG | 0.374870 | 7_2:-80878551 | Msa1081130:CDS |
| TGGAGAGGGATAATATTGTT+AGG | 0.381335 | 7_2:-80879191 | Msa1081130:CDS |
| TTGGGATGCATTGAGGAATT+GGG | 0.385650 | 7_2:-80879085 | Msa1081130:CDS |
| TGATCAAGGGGTCGAAGAAA+TGG | 0.385678 | 7_2:-80878747 | Msa1081130:CDS |
| GAAATGAGAGGCCTGATTAT+AGG | 0.387216 | 7_2:-80878846 | Msa1081130:CDS |
| ACCAGTGTCTCTGGAGTTGA+TGG | 0.391428 | 7_2:+80879542 | None:intergenic |
| GAGAAATTTGTTAAGTGTCT+TGG | 0.391444 | 7_2:-80877482 | Msa1081130:CDS |
| GGAAGGGTGTATTGATAATT+GGG | 0.393852 | 7_2:-80879103 | Msa1081130:CDS |
| ATTATTGGACCAGCTGGGTC+TGG | 0.396567 | 7_2:-80878817 | Msa1081130:CDS |
| GAACACCGTGGGTGTGTGAC+GGG | 0.400221 | 7_2:+80879598 | None:intergenic |
| CTTTGGTTTGGTATGGTGAC+TGG | 0.404298 | 7_2:+80879844 | None:intergenic |
| TCACTAATCATGAACCCCTT+TGG | 0.406513 | 7_2:-80879410 | Msa1081130:CDS |
| GGTTAATAAGCCGGTGTTGT+TGG | 0.408373 | 7_2:-80879124 | Msa1081130:CDS |
| GGGTTTGGAATATGAAGTTC+CGG | 0.409696 | 7_2:-80878902 | Msa1081130:CDS |
| ATAATAATCCACCTATAATC+AGG | 0.413924 | 7_2:+80878835 | None:intergenic |
| CTCCTGTTTCAATAATTGAA+TGG | 0.415829 | 7_2:-80878657 | Msa1081130:CDS |
| ATTACCTAAACCAGTGTCTC+TGG | 0.422088 | 7_2:+80879533 | None:intergenic |
| GATGCTACCTCTGCACCATC+AGG | 0.424520 | 7_2:+80878679 | None:intergenic |
| TTGATATCGGGAGTGGCGTT+CGG | 0.426068 | 7_2:-80879296 | Msa1081130:CDS |
| TTAGGGTCCACATATGCAAT+TGG | 0.427525 | 7_2:+80877110 | None:intergenic |
| TCAGATTGCTGACTTTGGTT+TGG | 0.427834 | 7_2:+80879832 | None:intergenic |
| AGCTTGGAATGCTGTGATCA+AGG | 0.428224 | 7_2:-80878761 | Msa1081130:CDS |
| AGCTTGTTCTTGATATTCTA+GGG | 0.429419 | 7_2:-80879491 | Msa1081130:CDS |
| AACTCCAGAGACACTGGTTT+AGG | 0.430834 | 7_2:-80879537 | Msa1081130:CDS |
| TGGATTATTATTGGACCAGC+TGG | 0.431844 | 7_2:-80878823 | Msa1081130:CDS |
| TTCACTAGCTAAGAAATGGC+TGG | 0.433037 | 7_2:-80877056 | Msa1081130:three_prime_UTR |
| GGCAATCTCTATTTCAATCC+AGG | 0.436566 | 7_2:-80879567 | Msa1081130:CDS |
| GCTTTACATATGCACTCAAT+TGG | 0.441061 | 7_2:+80878592 | None:intergenic |
| GGTACCCTTTGTTTGATATC+GGG | 0.441137 | 7_2:-80879308 | Msa1081130:CDS |
| CAGAAATCCAATTGCATATG+TGG | 0.444939 | 7_2:-80877117 | Msa1081130:three_prime_UTR |
| TGAACACCGTGGGTGTGTGA+CGG | 0.450073 | 7_2:+80879597 | None:intergenic |
| GATTTCGGTTGAGGAGTTTG+TGG | 0.461360 | 7_2:-80879160 | Msa1081130:CDS |
| ATCCAAATTCAACTTCAGCT+TGG | 0.469977 | 7_2:-80878777 | Msa1081130:CDS |
| CACACTGGTATCTGGAACAA+AGG | 0.473108 | 7_2:-80877434 | Msa1081130:CDS |
| GATACCAGTGTGCTTGCGTT+CGG | 0.473719 | 7_2:+80877445 | None:intergenic |
| TTGCTGACTTTGGTTTGGTA+TGG | 0.474340 | 7_2:+80879837 | None:intergenic |
| GTGTCTTGGAGTTTCTTAAG+AGG | 0.477250 | 7_2:-80877468 | Msa1081130:CDS |
| AATAAGCCGGTGTTGTTGGA+AGG | 0.481648 | 7_2:-80879120 | Msa1081130:CDS |
| AAGTTACTGATCCAAATTTG+CGG | 0.481971 | 7_2:-80877213 | Msa1081130:three_prime_UTR |
| TGTAATCAGATTGCTGACTT+TGG | 0.487706 | 7_2:+80879827 | None:intergenic |
| GCTTGGAATGCTGTGATCAA+GGG | 0.490367 | 7_2:-80878760 | Msa1081130:CDS |
| CACCAAATGCCACCAACCAC+TGG | 0.491804 | 7_2:+80878549 | None:intergenic |
| CCTTTGTTTGATATCGGGAG+TGG | 0.492650 | 7_2:-80879303 | Msa1081130:CDS |
| TTTGATGTCGAAACATTCTT+CGG | 0.495045 | 7_2:+80879629 | None:intergenic |
| TGAAAGGTGAATGGTTGGAG+AGG | 0.498202 | 7_2:-80879206 | Msa1081130:CDS |
| TAACACAAAACTACGTTAGC+AGG | 0.505548 | 7_2:-80878501 | Msa1081130:intron |
| GCCTGTGGAGATGAAGCTTA+AGG | 0.506931 | 7_2:-80879010 | Msa1081130:CDS |
| GATCAAGGGGTCGAAGAAAT+GGG | 0.508230 | 7_2:-80878746 | Msa1081130:CDS |
| CAGATCAAGTTAGAGAAGAA+AGG | 0.508713 | 7_2:-80878972 | Msa1081130:CDS |
| TCTCTGGAGTTGATGGAACC+TGG | 0.509296 | 7_2:+80879549 | None:intergenic |
| CCTTTGGAGGAATCTTGTGT+TGG | 0.509661 | 7_2:-80879394 | Msa1081130:CDS |
| CTAATCATGAACCCCTTTGG+AGG | 0.514583 | 7_2:-80879407 | Msa1081130:CDS |
| CAACACAAGATTCCTCCAAA+GGG | 0.515604 | 7_2:+80879395 | None:intergenic |
| GTCAGTTCATCAATTGCTCC+AGG | 0.519066 | 7_2:+80877361 | None:intergenic |
| ATTGAGTGCATATGTAAAGC+GGG | 0.520028 | 7_2:-80878589 | Msa1081130:CDS |
| TCCTTAAGCTTCATCTCCAC+AGG | 0.521980 | 7_2:+80879009 | None:intergenic |
| ATAATATTGTTAGGAAGAGA+GGG | 0.523338 | 7_2:-80879182 | Msa1081130:CDS |
| TTATCTTTGTGCCCAGTGGT+TGG | 0.523418 | 7_2:-80878561 | Msa1081130:CDS |
| TAAGACTGTCTATAGAAGCT+TGG | 0.524028 | 7_2:+80879891 | None:intergenic |
| TCTTTGTGCCCAGTGGTTGG+TGG | 0.525495 | 7_2:-80878558 | Msa1081130:CDS |
| ACCTCTGCACCATCAGGGCT+AGG | 0.527425 | 7_2:+80878685 | None:intergenic |
| GAACTTGAAAGCTCCCACTC+TGG | 0.530094 | 7_2:+80877273 | None:intergenic |
| TAAGTTTAAGAATGCTATTG+AGG | 0.530123 | 7_2:-80877392 | Msa1081130:CDS |
| TTATGGCAATTGATTCCTCC+AGG | 0.530459 | 7_2:+80878521 | None:intergenic |
| CACTCCCGATATCAAACAAA+GGG | 0.531337 | 7_2:+80879304 | None:intergenic |
| GTGGCATTTGGTGATCAACC+TGG | 0.533188 | 7_2:-80878539 | Msa1081130:CDS |
| TGAAATGAAAGGTGAATGGT+TGG | 0.544161 | 7_2:-80879211 | Msa1081130:CDS |
| ATTGAAATAGAGATTGCCTA+AGG | 0.545498 | 7_2:+80879572 | None:intergenic |
| GGTGTTCATCCTAGCCCTGA+TGG | 0.546334 | 7_2:-80878694 | Msa1081130:CDS |
| CCTCCCGATGTTATTCCGCC+CGG | 0.551681 | 7_2:-80878715 | Msa1081130:CDS |
| TCCATCAACTCCAGAGACAC+TGG | 0.557132 | 7_2:-80879543 | Msa1081130:CDS |
| GGTTTCAGTATAATGGGTCA+TGG | 0.560008 | 7_2:-80879356 | Msa1081130:CDS |
| ACCAAATGCCACCAACCACT+GGG | 0.564265 | 7_2:+80878550 | None:intergenic |
| CTTCTTCAACGAGAGATGAG+TGG | 0.567416 | 7_2:+80879664 | None:intergenic |
| GATTATTTGGTTAAGTTGTG+TGG | 0.571733 | 7_2:-80879057 | Msa1081130:CDS |
| TTGATAATTGGGATGCATTG+AGG | 0.572075 | 7_2:-80879092 | Msa1081130:CDS |
| GAAAGGTGAATGGTTGGAGA+GGG | 0.572473 | 7_2:-80879205 | Msa1081130:CDS |
| GCCTAAGGGCTGAACACCGT+GGG | 0.576195 | 7_2:+80879587 | None:intergenic |
| GAAAACATTGAAGCAATCAA+AGG | 0.576683 | 7_2:+80877076 | None:intergenic |
| ACCCACGGTGTTCAGCCCTT+AGG | 0.578095 | 7_2:-80879588 | Msa1081130:CDS |
| TCACTAGCTAAGAAATGGCT+GGG | 0.581051 | 7_2:-80877055 | Msa1081130:three_prime_UTR |
| ATAAGCCGGTGTTGTTGGAA+GGG | 0.582277 | 7_2:-80879119 | Msa1081130:CDS |
| CCAACACAAGATTCCTCCAA+AGG | 0.589735 | 7_2:+80879394 | None:intergenic |
| ATCTTGAAATGAAAGGTGAA+TGG | 0.590130 | 7_2:-80879215 | Msa1081130:CDS |
| ACACCGGGCGGAATAACATC+GGG | 0.595142 | 7_2:+80878712 | None:intergenic |
| ATCAGGGCTAGGATGAACAC+CGG | 0.595347 | 7_2:+80878696 | None:intergenic |
| AAGAACAAGCTCATCAGTGA+GGG | 0.597323 | 7_2:+80879503 | None:intergenic |
| TCCTAGCCCTGATGGTGCAG+AGG | 0.603932 | 7_2:-80878686 | Msa1081130:CDS |
| GAGGTTATCTTTGTGCCCAG+TGG | 0.605601 | 7_2:-80878565 | Msa1081130:CDS |
| GGATTATTATTGGACCAGCT+GGG | 0.609112 | 7_2:-80878822 | Msa1081130:CDS |
| AACACCGGGCGGAATAACAT+CGG | 0.610276 | 7_2:+80878711 | None:intergenic |
| TTTAGATGGTAATAGTTTAG+GGG | 0.614858 | 7_2:-80879466 | Msa1081130:CDS |
| TGTGCTAATCTTGAAATGAA+AGG | 0.615147 | 7_2:-80879222 | Msa1081130:CDS |
| ATGAGAGGCCTGATTATAGG+TGG | 0.615319 | 7_2:-80878843 | Msa1081130:CDS |
| CTTGGAATGCTGTGATCAAG+GGG | 0.619460 | 7_2:-80878759 | Msa1081130:CDS |
| AAAGACGATCCAGACCCAGC+TGG | 0.622160 | 7_2:+80878808 | None:intergenic |
| TTGAAATAGAGATTGCCTAA+GGG | 0.622212 | 7_2:+80879573 | None:intergenic |
| TCTGCCCCGTCACACACCCA+CGG | 0.625768 | 7_2:-80879603 | Msa1081130:CDS |
| AACACCGTGGGTGTGTGACG+GGG | 0.625830 | 7_2:+80879599 | None:intergenic |
| TTTGGATCAAACAGATACAA+CGG | 0.630505 | 7_2:+80878949 | None:intergenic |
| TCTGTTGCAGACACCAGAGT+GGG | 0.640693 | 7_2:-80877286 | Msa1081130:CDS |
| CCACTCCCGATATCAAACAA+AGG | 0.643905 | 7_2:+80879303 | None:intergenic |
| ATGCTACCTCTGCACCATCA+GGG | 0.644492 | 7_2:+80878680 | None:intergenic |
| TTGAGTGCATATGTAAAGCG+GGG | 0.644930 | 7_2:-80878588 | Msa1081130:CDS |
| AATTGAGTGCATATGTAAAG+CGG | 0.648535 | 7_2:-80878590 | Msa1081130:CDS |
| GAGGCCGAACGCAAGCACAC+TGG | 0.652835 | 7_2:-80877449 | Msa1081130:CDS |
| GTCTGCAACAGAATCCCAGA+AGG | 0.653217 | 7_2:+80877297 | None:intergenic |
| CAAGAACAAGCTCATCAGTG+AGG | 0.659400 | 7_2:+80879502 | None:intergenic |
| TGGTTTGGTATGGTGACTGG+AGG | 0.662167 | 7_2:+80879847 | None:intergenic |
| AAATCCTCCCGAAAATACAC+CGG | 0.666892 | 7_2:+80878883 | None:intergenic |
| TCAGGGCTAGGATGAACACC+GGG | 0.669209 | 7_2:+80878697 | None:intergenic |
| ATACACCCTTCCAACAACAC+CGG | 0.670300 | 7_2:+80879114 | None:intergenic |
| TTCTGTTGCAGACACCAGAG+TGG | 0.688725 | 7_2:-80877287 | Msa1081130:CDS |
| TGCCTAAGGGCTGAACACCG+TGG | 0.694722 | 7_2:+80879586 | None:intergenic |
| GTACCCATTAGAAACAACAA+AGG | 0.698809 | 7_2:+80879326 | None:intergenic |
| AACACAAGATTCCTCCAAAG+GGG | 0.706242 | 7_2:+80879396 | None:intergenic |
| TGAGTGCATATGTAAAGCGG+GGG | 0.706771 | 7_2:-80878587 | Msa1081130:CDS |
| GCATTTGGTGATCAACCTGG+AGG | 0.725951 | 7_2:-80878536 | Msa1081130:CDS |
| GGGCTAGGATGAACACCGGG+CGG | 0.735361 | 7_2:+80878700 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACATATTTGAAAATTTAAT+CGG | - | chr7_2:80878651-80878670 | Msa1081130:CDS | 10.0% |
| !! | TATTCATTTCAAAATATAAA+GGG | + | chr7_2:80878790-80878809 | None:intergenic | 10.0% |
| !!! | TTATTATTTTTTATTTCATG+TGG | - | chr7_2:80879301-80879320 | Msa1081130:CDS | 10.0% |
| !! | GTATTCATTTCAAAATATAA+AGG | + | chr7_2:80878791-80878810 | None:intergenic | 15.0% |
| !! | AAATCAATTTCAATCAAAAA+AGG | + | chr7_2:80879920-80879939 | None:intergenic | 15.0% |
| !!! | TTTTTGATTGAAATTGATTT+TGG | - | chr7_2:80879920-80879939 | Msa1081130:five_prime_UTR | 15.0% |
| !!! | TTGGAAATACTTTAGTTTTT+TGG | + | chr7_2:80876976-80876995 | None:intergenic | 20.0% |
| !!! | GTTTTTGTTTCGTTTTTTTT+TGG | + | chr7_2:80877152-80877171 | None:intergenic | 20.0% |
| !!! | TTTTTAGTAATGGAAGAAAT+GGG | + | chr7_2:80877199-80877218 | None:intergenic | 20.0% |
| !!! | TTTTTAGATGGTAATAGTTT+AGG | - | chr7_2:80877415-80877434 | Msa1081130:CDS | 20.0% |
| !!! | TTTTAGATGGTAATAGTTTA+GGG | - | chr7_2:80877416-80877435 | Msa1081130:CDS | 20.0% |
| !!! | TAAAGTTAGAGACTTTTATT+CGG | - | chr7_2:80877615-80877634 | Msa1081130:intron | 20.0% |
| !!! | CTTAGTACTTTTAGATTAAT+AGG | - | chr7_2:80878418-80878437 | Msa1081130:intron | 20.0% |
| !!! | GTCATTTTTTACATGTTAAT+AGG | - | chr7_2:80878542-80878561 | Msa1081130:CDS | 20.0% |
| !!! | GAATGTTCATTGTTTTAATT+CGG | - | chr7_2:80878572-80878591 | Msa1081130:CDS | 20.0% |
| !!! | TATATTTTGAAATGAATACG+AGG | - | chr7_2:80878792-80878811 | Msa1081130:CDS | 20.0% |
| !!! | ATATTTTGAAATGAATACGA+GGG | - | chr7_2:80878793-80878812 | Msa1081130:CDS | 20.0% |
| !!! | TTGCTATTTTGAATACTTAT+TGG | - | chr7_2:80879230-80879249 | Msa1081130:CDS | 20.0% |
| !! | TATGTATGAATTTCTTTAGA+AGG | + | chr7_2:80879637-80879656 | None:intergenic | 20.0% |
| !!! | TCTTTGTTCTTGTTTTGATA+CGG | + | chr7_2:80877120-80877139 | None:intergenic | 25.0% |
| !!! | TTTTAGTAATGGAAGAAATG+GGG | + | chr7_2:80877198-80877217 | None:intergenic | 25.0% |
| !!! | GTTTTTAGTAATGGAAGAAA+TGG | + | chr7_2:80877200-80877219 | None:intergenic | 25.0% |
| ! | TTTAGATGGTAATAGTTTAG+GGG | - | chr7_2:80877417-80877436 | Msa1081130:CDS | 25.0% |
| ! | ATAATATTGTTAGGAAGAGA+GGG | - | chr7_2:80877701-80877720 | Msa1081130:intron | 25.0% |
| ! | ATAATAATCCACCTATAATC+AGG | + | chr7_2:80878051-80878070 | None:intergenic | 25.0% |
| !!! | GATTATAGGTGGATTATTAT+TGG | - | chr7_2:80878051-80878070 | Msa1081130:intron | 25.0% |
| ! | AACCATTCAATTATTGAAAC+AGG | + | chr7_2:80878231-80878250 | None:intergenic | 25.0% |
| ! | AAAAAAGGACACATAAAATC+AGG | + | chr7_2:80878509-80878528 | None:intergenic | 25.0% |
| ! | ACTACTTAACAGACAAAAAA+AGG | + | chr7_2:80878524-80878543 | None:intergenic | 25.0% |
| !! | ATTTTCAAATATGTAGTCCA+AGG | + | chr7_2:80878646-80878665 | None:intergenic | 25.0% |
| ! | GGAGTCATTATAATTAGAAA+TGG | - | chr7_2:80878672-80878691 | Msa1081130:CDS | 25.0% |
| !!! | TTATTGATTCACAATAGCAT+GGG | - | chr7_2:80878714-80878733 | Msa1081130:CDS | 25.0% |
| !!! | CTTTTGGTTTTGTATTTTGT+TGG | - | chr7_2:80879332-80879351 | Msa1081130:CDS | 25.0% |
| ! | TAAGTTTAAGAATGCTATTG+AGG | - | chr7_2:80879491-80879510 | Msa1081130:CDS | 25.0% |
| !! | CTTTTTCTCTTCTTCTTTTT+GGG | + | chr7_2:80879547-80879566 | None:intergenic | 25.0% |
| !! | TCTTTTTCTCTTCTTCTTTT+TGG | + | chr7_2:80879548-80879567 | None:intergenic | 25.0% |
| !!! | TGTTGTACTCTATTTTTTAG+AGG | - | chr7_2:80879737-80879756 | Msa1081130:CDS | 25.0% |
| !!! | CTTTGTTCTTGTTTTGATAC+GGG | + | chr7_2:80877119-80877138 | None:intergenic | 30.0% |
| !!! | TTTGGTTTTTGAGTTTGTGA+GGG | + | chr7_2:80877174-80877193 | None:intergenic | 30.0% |
| !!! | TTTTGGTTTTTGAGTTTGTG+AGG | + | chr7_2:80877175-80877194 | None:intergenic | 30.0% |
| !!! | AGATGAGTGGTTTTTAGTAA+TGG | + | chr7_2:80877209-80877228 | None:intergenic | 30.0% |
| TTTGATGTCGAAACATTCTT+CGG | + | chr7_2:80877257-80877276 | None:intergenic | 30.0% | |
| TTGAAATAGAGATTGCCTAA+GGG | + | chr7_2:80877313-80877332 | None:intergenic | 30.0% | |
| ATTGAAATAGAGATTGCCTA+AGG | + | chr7_2:80877314-80877333 | None:intergenic | 30.0% | |
| ! | AGCTTGTTCTTGATATTCTA+GGG | - | chr7_2:80877392-80877411 | Msa1081130:CDS | 30.0% |
| !!! | GATATTCTAGGGTTTTTAGA+TGG | - | chr7_2:80877403-80877422 | Msa1081130:CDS | 30.0% |
| ! | TGTTGGAGAATTTTGTTGAT+GGG | - | chr7_2:80877506-80877525 | Msa1081130:intron | 30.0% |
| !! | TTGATGGGTTTCAGTATAAT+GGG | - | chr7_2:80877521-80877540 | Msa1081130:intron | 30.0% |
| !! | TCTACCTTTGTTGTTTCTAA+TGG | - | chr7_2:80877553-80877572 | Msa1081130:intron | 30.0% |
| !! | CTACCTTTGTTGTTTCTAAT+GGG | - | chr7_2:80877554-80877573 | Msa1081130:intron | 30.0% |
| TGTGCTAATCTTGAAATGAA+AGG | - | chr7_2:80877661-80877680 | Msa1081130:intron | 30.0% | |
| ATCTTGAAATGAAAGGTGAA+TGG | - | chr7_2:80877668-80877687 | Msa1081130:intron | 30.0% | |
| GATAATATTGTTAGGAAGAG+AGG | - | chr7_2:80877700-80877719 | Msa1081130:intron | 30.0% | |
| GAATTGGGATAGAGATTATT+TGG | - | chr7_2:80877813-80877832 | Msa1081130:intron | 30.0% | |
| ! | GATTATTTGGTTAAGTTGTG+TGG | - | chr7_2:80877826-80877845 | Msa1081130:intron | 30.0% |
| !! | TGGTGATGATGTTAAGTTTT+CGG | - | chr7_2:80877846-80877865 | Msa1081130:intron | 30.0% |
| ! | ATGATGTTAAGTTTTCGGTT+GGG | - | chr7_2:80877851-80877870 | Msa1081130:intron | 30.0% |
| ! | ATGAAGCTTAAGGACTATTT+TGG | - | chr7_2:80877883-80877902 | Msa1081130:intron | 30.0% |
| TTTGGATCAAACAGATACAA+CGG | + | chr7_2:80877937-80877956 | None:intergenic | 30.0% | |
| !!! | GGAACTTTTTCAGCAAATTT+TGG | + | chr7_2:80877955-80877974 | None:intergenic | 30.0% |
| TCATATTCCAAACCCAATTT+CGG | + | chr7_2:80877976-80877995 | None:intergenic | 30.0% | |
| CTCCTGTTTCAATAATTGAA+TGG | - | chr7_2:80878226-80878245 | Msa1081130:intron | 30.0% | |
| ! | GAATGGTTCATGAACTTTTA+TGG | - | chr7_2:80878243-80878262 | Msa1081130:intron | 30.0% |
| TTTATGGTGCAACAAAGAAT+TGG | - | chr7_2:80878259-80878278 | Msa1081130:intron | 30.0% | |
| AATTGAGTGCATATGTAAAG+CGG | - | chr7_2:80878293-80878312 | Msa1081130:intron | 30.0% | |
| AATTAGAAATGGTCAGTACA+TGG | - | chr7_2:80878683-80878702 | Msa1081130:CDS | 30.0% | |
| !! | CTTATTGATTCACAATAGCA+TGG | - | chr7_2:80878713-80878732 | Msa1081130:CDS | 30.0% |
| GAAAGAAAAAACTTTCCATC+AGG | + | chr7_2:80878944-80878963 | None:intergenic | 30.0% | |
| TTTCTCATTTAGTGCATGTT+TGG | - | chr7_2:80878988-80879007 | Msa1081130:CDS | 30.0% | |
| ATTTGGATTGACAGTGAATT+CGG | + | chr7_2:80879111-80879130 | None:intergenic | 30.0% | |
| ACTGTCAATCCAAATATGAT+CGG | - | chr7_2:80879116-80879135 | Msa1081130:CDS | 30.0% | |
| AATCATTAGCCGATCATATT+TGG | + | chr7_2:80879128-80879147 | None:intergenic | 30.0% | |
| TGAATACTTATTGGAATCCA+TGG | - | chr7_2:80879239-80879258 | Msa1081130:CDS | 30.0% | |
| ! | TCATGTGGTTTGAATTCTTT+TGG | - | chr7_2:80879316-80879335 | Msa1081130:CDS | 30.0% |
| !! | GAGAAATTTGTTAAGTGTCT+TGG | - | chr7_2:80879401-80879420 | Msa1081130:CDS | 30.0% |
| AAGTTACTGATCCAAATTTG+CGG | - | chr7_2:80879670-80879689 | Msa1081130:CDS | 30.0% | |
| GAAAACATTGAAGCAATCAA+AGG | + | chr7_2:80879810-80879829 | None:intergenic | 30.0% | |
| ! | TGTTTTCACTAGCTAAGAAA+TGG | - | chr7_2:80879823-80879842 | Msa1081130:CDS | 30.0% |
| TAAGACTGTCTATAGAAGCT+TGG | + | chr7_2:80876995-80877014 | None:intergenic | 35.0% | |
| !! | TGTAATCAGATTGCTGACTT+TGG | + | chr7_2:80877059-80877078 | None:intergenic | 35.0% |
| ! | TAATGGAAGAAATGGGGTTT+TGG | + | chr7_2:80877192-80877211 | None:intergenic | 35.0% |
| ! | GAGCTTGTTCTTGATATTCT+AGG | - | chr7_2:80877391-80877410 | Msa1081130:CDS | 35.0% |
| ! | TGGTAATAGTTTAGGGGTTT+TGG | - | chr7_2:80877423-80877442 | Msa1081130:CDS | 35.0% |
| ! | GTGTTGGAGAATTTTGTTGA+TGG | - | chr7_2:80877505-80877524 | Msa1081130:intron | 35.0% |
| !! | GTTGATGGGTTTCAGTATAA+TGG | - | chr7_2:80877520-80877539 | Msa1081130:intron | 35.0% |
| GTACCCATTAGAAACAACAA+AGG | + | chr7_2:80877560-80877579 | None:intergenic | 35.0% | |
| !!! | CGGATTATCTTTTTCAGAGT+TGG | - | chr7_2:80877635-80877654 | Msa1081130:intron | 35.0% |
| TGAAATGAAAGGTGAATGGT+TGG | - | chr7_2:80877672-80877691 | Msa1081130:intron | 35.0% | |
| TGGAGAGGGATAATATTGTT+AGG | - | chr7_2:80877692-80877711 | Msa1081130:intron | 35.0% | |
| !! | TTTTGAGGAGGTTAATAAGC+CGG | - | chr7_2:80877750-80877769 | Msa1081130:intron | 35.0% |
| ! | TGGAAGGGTGTATTGATAAT+TGG | - | chr7_2:80877779-80877798 | Msa1081130:intron | 35.0% |
| ! | GGAAGGGTGTATTGATAATT+GGG | - | chr7_2:80877780-80877799 | Msa1081130:intron | 35.0% |
| ! | TTGATAATTGGGATGCATTG+AGG | - | chr7_2:80877791-80877810 | Msa1081130:intron | 35.0% |
| ! | GATGATGTTAAGTTTTCGGT+TGG | - | chr7_2:80877850-80877869 | Msa1081130:intron | 35.0% |
| CAGATCAAGTTAGAGAAGAA+AGG | - | chr7_2:80877911-80877930 | Msa1081130:intron | 35.0% | |
| TGCTGAAAAAGTTCCGAAAT+TGG | - | chr7_2:80877960-80877979 | Msa1081130:intron | 35.0% | |
| GCTGAAAAAGTTCCGAAATT+GGG | - | chr7_2:80877961-80877980 | Msa1081130:intron | 35.0% | |
| AAAAGTTCCGAAATTGGGTT+TGG | - | chr7_2:80877966-80877985 | Msa1081130:intron | 35.0% | |
| ! | ATGAAGTTCCGGTGTATTTT+CGG | - | chr7_2:80877992-80878011 | Msa1081130:intron | 35.0% |
| !! | TATTTTCGGGAGGATTTGTT+TGG | - | chr7_2:80878006-80878025 | Msa1081130:intron | 35.0% |
| !!! | GAGGATTTGTTTGGTGTTTT+GGG | - | chr7_2:80878015-80878034 | Msa1081130:intron | 35.0% |
| ATCCAAATTCAACTTCAGCT+TGG | - | chr7_2:80878106-80878125 | Msa1081130:intron | 35.0% | |
| TTCCAAGCTGAAGTTGAATT+TGG | + | chr7_2:80878111-80878130 | None:intergenic | 35.0% | |
| GCTTTACATATGCACTCAAT+TGG | + | chr7_2:80878294-80878313 | None:intergenic | 35.0% | |
| ATTGAGTGCATATGTAAAGC+GGG | - | chr7_2:80878294-80878313 | Msa1081130:intron | 35.0% | |
| !!! | GCTAACGTAGTTTTGTGTTA+TGG | + | chr7_2:80878382-80878401 | None:intergenic | 35.0% |
| TAACACAAAACTACGTTAGC+AGG | - | chr7_2:80878382-80878401 | Msa1081130:intron | 35.0% | |
| GAAATTCATTGAAGCTGCAA+TGG | + | chr7_2:80878768-80878787 | None:intergenic | 35.0% | |
| !!! | TTTTGAAATGAATACGAGGG+AGG | - | chr7_2:80878796-80878815 | Msa1081130:CDS | 35.0% |
| GTTTAGTGACCTTGAGATAT+TGG | - | chr7_2:80878873-80878892 | Msa1081130:CDS | 35.0% | |
| GATTATGTGATTCCTAGAAG+GGG | + | chr7_2:80878922-80878941 | None:intergenic | 35.0% | |
| GGATTATGTGATTCCTAGAA+GGG | + | chr7_2:80878923-80878942 | None:intergenic | 35.0% | |
| AGGATTATGTGATTCCTAGA+AGG | + | chr7_2:80878924-80878943 | None:intergenic | 35.0% | |
| TAGGAATCACATAATCCTGA+TGG | - | chr7_2:80878926-80878945 | Msa1081130:CDS | 35.0% | |
| ! | TTTTAGCAAAAGCTGCACTT+TGG | + | chr7_2:80879066-80879085 | None:intergenic | 35.0% |
| ATCGTATCACATGTGCTTAT+CGG | + | chr7_2:80879178-80879197 | None:intergenic | 35.0% | |
| ACTTATTGGAATCCATGGAA+CGG | - | chr7_2:80879244-80879263 | Msa1081130:CDS | 35.0% | |
| ACTTTAACCTCAAACGTTAG+CGG | - | chr7_2:80879366-80879385 | Msa1081130:CDS | 35.0% | |
| AAGAGAAAAAGATCCAGCAA+AGG | - | chr7_2:80879556-80879575 | Msa1081130:CDS | 35.0% | |
| TCTATAATCAGCCGCAAATT+TGG | + | chr7_2:80879684-80879703 | None:intergenic | 35.0% | |
| CAGAAATCCAATTGCATATG+TGG | - | chr7_2:80879766-80879785 | Msa1081130:CDS | 35.0% | |
| CAAAGGAACACTAGACTTTA+GGG | + | chr7_2:80879793-80879812 | None:intergenic | 35.0% | |
| TCAAAGGAACACTAGACTTT+AGG | + | chr7_2:80879794-80879813 | None:intergenic | 35.0% | |
| !! | TTGCTGACTTTGGTTTGGTA+TGG | + | chr7_2:80877049-80877068 | None:intergenic | 40.0% |
| !! | TCAGATTGCTGACTTTGGTT+TGG | + | chr7_2:80877054-80877073 | None:intergenic | 40.0% |
| GGCAATCTCTATTTCAATCC+AGG | - | chr7_2:80877316-80877335 | Msa1081130:CDS | 40.0% | |
| ATTACCTAAACCAGTGTCTC+TGG | + | chr7_2:80877353-80877372 | None:intergenic | 40.0% | |
| AAGAACAAGCTCATCAGTGA+GGG | + | chr7_2:80877383-80877402 | None:intergenic | 40.0% | |
| TCACTAATCATGAACCCCTT+TGG | - | chr7_2:80877473-80877492 | Msa1081130:CDS | 40.0% | |
| AACACAAGATTCCTCCAAAG+GGG | + | chr7_2:80877490-80877509 | None:intergenic | 40.0% | |
| CAACACAAGATTCCTCCAAA+GGG | + | chr7_2:80877491-80877510 | None:intergenic | 40.0% | |
| !! | GGTTTCAGTATAATGGGTCA+TGG | - | chr7_2:80877527-80877546 | Msa1081130:intron | 40.0% |
| ! | GGGTACCCTTTGTTTGATAT+CGG | - | chr7_2:80877574-80877593 | Msa1081130:intron | 40.0% |
| ! | GGTACCCTTTGTTTGATATC+GGG | - | chr7_2:80877575-80877594 | Msa1081130:intron | 40.0% |
| CACTCCCGATATCAAACAAA+GGG | + | chr7_2:80877582-80877601 | None:intergenic | 40.0% | |
| TGTTAGGAAGAGAGGGATTT+CGG | - | chr7_2:80877708-80877727 | Msa1081130:intron | 40.0% | |
| ATTGGGATGCATTGAGGAAT+TGG | - | chr7_2:80877797-80877816 | Msa1081130:intron | 40.0% | |
| TTGGGATGCATTGAGGAATT+GGG | - | chr7_2:80877798-80877817 | Msa1081130:intron | 40.0% | |
| ! | GGGTTTGGAATATGAAGTTC+CGG | - | chr7_2:80877981-80878000 | Msa1081130:intron | 40.0% |
| ! | TGAAGTTCCGGTGTATTTTC+GGG | - | chr7_2:80877993-80878012 | Msa1081130:intron | 40.0% |
| AAATCCTCCCGAAAATACAC+CGG | + | chr7_2:80878003-80878022 | None:intergenic | 40.0% | |
| !!! | GGAGGATTTGTTTGGTGTTT+TGG | - | chr7_2:80878014-80878033 | Msa1081130:intron | 40.0% |
| !!! | TTGGTGTTTTGGGAAATGAG+AGG | - | chr7_2:80878025-80878044 | Msa1081130:intron | 40.0% |
| GAAATGAGAGGCCTGATTAT+AGG | - | chr7_2:80878037-80878056 | Msa1081130:intron | 40.0% | |
| TGGATTATTATTGGACCAGC+TGG | - | chr7_2:80878060-80878079 | Msa1081130:intron | 40.0% | |
| GGATTATTATTGGACCAGCT+GGG | - | chr7_2:80878061-80878080 | Msa1081130:intron | 40.0% | |
| TTGAGTGCATATGTAAAGCG+GGG | - | chr7_2:80878295-80878314 | Msa1081130:intron | 40.0% | |
| ! | TTATGGCAATTGATTCCTCC+AGG | + | chr7_2:80878365-80878384 | None:intergenic | 40.0% |
| TCGGATGTTAAAACATCCCT+TGG | - | chr7_2:80878591-80878610 | Msa1081130:CDS | 40.0% | |
| TATATGTATCCCTACTCCCT+AGG | - | chr7_2:80878825-80878844 | Msa1081130:CDS | 40.0% | |
| TCAGTGAGCTATTGTACCTA+GGG | + | chr7_2:80878844-80878863 | None:intergenic | 40.0% | |
| ATCAGTGAGCTATTGTACCT+AGG | + | chr7_2:80878845-80878864 | None:intergenic | 40.0% | |
| AATATAACGAGTCCGTTCCA+TGG | + | chr7_2:80879259-80879278 | None:intergenic | 40.0% | |
| GTGTCTTGGAGTTTCTTAAG+AGG | - | chr7_2:80879415-80879434 | Msa1081130:CDS | 40.0% | |
| AGAAGGAAAGTTTCCTTTGC+TGG | + | chr7_2:80879572-80879591 | None:intergenic | 40.0% | |
| AGCAAAGGAAACTTTCCTTC+TGG | - | chr7_2:80879571-80879590 | Msa1081130:CDS | 40.0% | |
| GCAAAGGAAACTTTCCTTCT+GGG | - | chr7_2:80879572-80879591 | Msa1081130:CDS | 40.0% | |
| TTAGGGTCCACATATGCAAT+TGG | + | chr7_2:80879776-80879795 | None:intergenic | 40.0% | |
| TTCACTAGCTAAGAAATGGC+TGG | - | chr7_2:80879827-80879846 | Msa1081130:CDS | 40.0% | |
| TCACTAGCTAAGAAATGGCT+GGG | - | chr7_2:80879828-80879847 | Msa1081130:CDS | 40.0% | |
| !! | CTTTGGTTTGGTATGGTGAC+TGG | + | chr7_2:80877042-80877061 | None:intergenic | 45.0% |
| CTTCTTCAACGAGAGATGAG+TGG | + | chr7_2:80877222-80877241 | None:intergenic | 45.0% | |
| !! | AACTCCAGAGACACTGGTTT+AGG | - | chr7_2:80877346-80877365 | Msa1081130:CDS | 45.0% |
| CAAGAACAAGCTCATCAGTG+AGG | + | chr7_2:80877384-80877403 | None:intergenic | 45.0% | |
| CTAATCATGAACCCCTTTGG+AGG | - | chr7_2:80877476-80877495 | Msa1081130:CDS | 45.0% | |
| CCAACACAAGATTCCTCCAA+AGG | + | chr7_2:80877492-80877511 | None:intergenic | 45.0% | |
| ! | CCTTTGGAGGAATCTTGTGT+TGG | - | chr7_2:80877489-80877508 | Msa1081130:intron | 45.0% |
| CCACTCCCGATATCAAACAA+AGG | + | chr7_2:80877583-80877602 | None:intergenic | 45.0% | |
| ! | CCTTTGTTTGATATCGGGAG+TGG | - | chr7_2:80877580-80877599 | Msa1081130:intron | 45.0% |
| TGAAAGGTGAATGGTTGGAG+AGG | - | chr7_2:80877677-80877696 | Msa1081130:intron | 45.0% | |
| GAAAGGTGAATGGTTGGAGA+GGG | - | chr7_2:80877678-80877697 | Msa1081130:intron | 45.0% | |
| GATTTCGGTTGAGGAGTTTG+TGG | - | chr7_2:80877723-80877742 | Msa1081130:intron | 45.0% | |
| ! | GGAGTTTGTGGCGAATTTTG+AGG | - | chr7_2:80877735-80877754 | Msa1081130:intron | 45.0% |
| !! | GTTTGTGGCGAATTTTGAGG+AGG | - | chr7_2:80877738-80877757 | Msa1081130:intron | 45.0% |
| !! | GGTTAATAAGCCGGTGTTGT+TGG | - | chr7_2:80877759-80877778 | Msa1081130:intron | 45.0% |
| !! | AATAAGCCGGTGTTGTTGGA+AGG | - | chr7_2:80877763-80877782 | Msa1081130:intron | 45.0% |
| !! | ATAAGCCGGTGTTGTTGGAA+GGG | - | chr7_2:80877764-80877783 | Msa1081130:intron | 45.0% |
| ATACACCCTTCCAACAACAC+CGG | + | chr7_2:80877772-80877791 | None:intergenic | 45.0% | |
| TCCTTAAGCTTCATCTCCAC+AGG | + | chr7_2:80877877-80877896 | None:intergenic | 45.0% | |
| ATGAGAGGCCTGATTATAGG+TGG | - | chr7_2:80878040-80878059 | Msa1081130:intron | 45.0% | |
| AGCTTGGAATGCTGTGATCA+AGG | - | chr7_2:80878122-80878141 | Msa1081130:intron | 45.0% | |
| GCTTGGAATGCTGTGATCAA+GGG | - | chr7_2:80878123-80878142 | Msa1081130:intron | 45.0% | |
| CTTGGAATGCTGTGATCAAG+GGG | - | chr7_2:80878124-80878143 | Msa1081130:intron | 45.0% | |
| TGATCAAGGGGTCGAAGAAA+TGG | - | chr7_2:80878136-80878155 | Msa1081130:intron | 45.0% | |
| GATCAAGGGGTCGAAGAAAT+GGG | - | chr7_2:80878137-80878156 | Msa1081130:intron | 45.0% | |
| TGAGTGCATATGTAAAGCGG+GGG | - | chr7_2:80878296-80878315 | Msa1081130:intron | 45.0% | |
| TTATCTTTGTGCCCAGTGGT+TGG | - | chr7_2:80878322-80878341 | Msa1081130:intron | 45.0% | |
| TCCCTTGGCATCTCAAAATC+TGG | - | chr7_2:80878606-80878625 | Msa1081130:CDS | 45.0% | |
| !!! | GCCAGATTTTGAGATGCCAA+GGG | + | chr7_2:80878610-80878629 | None:intergenic | 45.0% |
| !!! | AGCCAGATTTTGAGATGCCA+AGG | + | chr7_2:80878611-80878630 | None:intergenic | 45.0% |
| !!! | TGGCTCTTTTAGAGTGTCCT+TGG | - | chr7_2:80878626-80878645 | Msa1081130:CDS | 45.0% |
| GCTATTGTACCTAGGGAGTA+GGG | + | chr7_2:80878837-80878856 | None:intergenic | 45.0% | |
| AGCTATTGTACCTAGGGAGT+AGG | + | chr7_2:80878838-80878857 | None:intergenic | 45.0% | |
| ! | ACAAGTACCGCTAACGTTTG+AGG | + | chr7_2:80879376-80879395 | None:intergenic | 45.0% |
| ! | ACGTTAGCGGTACTTGTTAC+AGG | - | chr7_2:80879379-80879398 | Msa1081130:CDS | 45.0% |
| ! | CACACTGGTATCTGGAACAA+AGG | - | chr7_2:80879449-80879468 | Msa1081130:CDS | 45.0% |
| ! | GCTATTGAGGCTTCTTTTCC+TGG | - | chr7_2:80879504-80879523 | Msa1081130:CDS | 45.0% |
| GTCAGTTCATCAATTGCTCC+AGG | + | chr7_2:80879525-80879544 | None:intergenic | 45.0% | |
| !! | TGGTTTGGTATGGTGACTGG+AGG | + | chr7_2:80877039-80877058 | None:intergenic | 50.0% |
| !! | TCTCTGGAGTTGATGGAACC+TGG | + | chr7_2:80877337-80877356 | None:intergenic | 50.0% |
| TCCATCAACTCCAGAGACAC+TGG | - | chr7_2:80877340-80877359 | Msa1081130:CDS | 50.0% | |
| !! | ACCAGTGTCTCTGGAGTTGA+TGG | + | chr7_2:80877344-80877363 | None:intergenic | 50.0% |
| TTGATATCGGGAGTGGCGTT+CGG | - | chr7_2:80877587-80877606 | Msa1081130:intron | 50.0% | |
| GAAGAGAGGGATTTCGGTTG+AGG | - | chr7_2:80877714-80877733 | Msa1081130:intron | 50.0% | |
| ! | TAAGTTTTCGGTTGGGCCTG+TGG | - | chr7_2:80877858-80877877 | Msa1081130:intron | 50.0% |
| GCCTGTGGAGATGAAGCTTA+AGG | - | chr7_2:80877873-80877892 | Msa1081130:intron | 50.0% | |
| !! | AGTTCCGGTGTATTTTCGGG+AGG | - | chr7_2:80877996-80878015 | Msa1081130:intron | 50.0% |
| ATTATTGGACCAGCTGGGTC+TGG | - | chr7_2:80878066-80878085 | Msa1081130:intron | 50.0% | |
| AACACCGGGCGGAATAACAT+CGG | + | chr7_2:80878175-80878194 | None:intergenic | 50.0% | |
| ATCAGGGCTAGGATGAACAC+CGG | + | chr7_2:80878190-80878209 | None:intergenic | 50.0% | |
| ATGCTACCTCTGCACCATCA+GGG | + | chr7_2:80878206-80878225 | None:intergenic | 50.0% | |
| GAGGTTATCTTTGTGCCCAG+TGG | - | chr7_2:80878318-80878337 | Msa1081130:intron | 50.0% | |
| ACCAAATGCCACCAACCACT+GGG | + | chr7_2:80878336-80878355 | None:intergenic | 50.0% | |
| ! | GTGGCATTTGGTGATCAACC+TGG | - | chr7_2:80878344-80878363 | Msa1081130:intron | 50.0% |
| ! | GCATTTGGTGATCAACCTGG+AGG | - | chr7_2:80878347-80878366 | Msa1081130:intron | 50.0% |
| TCATTGAAGCTGCAATGGCG+TGG | + | chr7_2:80878763-80878782 | None:intergenic | 50.0% | |
| AGGTTCGCGCCAATATCTCA+AGG | + | chr7_2:80878885-80878904 | None:intergenic | 50.0% | |
| GTAGAATCAGTGTGTCGCAC+TGG | + | chr7_2:80879089-80879108 | None:intergenic | 50.0% | |
| GATACCAGTGTGCTTGCGTT+CGG | + | chr7_2:80879441-80879460 | None:intergenic | 50.0% | |
| AACGCAAGCACACTGGTATC+TGG | - | chr7_2:80879441-80879460 | Msa1081130:CDS | 50.0% | |
| GTCTGCAACAGAATCCCAGA+AGG | + | chr7_2:80879589-80879608 | None:intergenic | 50.0% | |
| TTCTGTTGCAGACACCAGAG+TGG | - | chr7_2:80879596-80879615 | Msa1081130:CDS | 50.0% | |
| TCTGTTGCAGACACCAGAGT+GGG | - | chr7_2:80879597-80879616 | Msa1081130:CDS | 50.0% | |
| GAACTTGAAAGCTCCCACTC+TGG | + | chr7_2:80879613-80879632 | None:intergenic | 50.0% | |
| TGAACACCGTGGGTGTGTGA+CGG | + | chr7_2:80877289-80877308 | None:intergenic | 55.0% | |
| AAAGACGATCCAGACCCAGC+TGG | + | chr7_2:80878078-80878097 | None:intergenic | 55.0% | |
| ACACCGGGCGGAATAACATC+GGG | + | chr7_2:80878174-80878193 | None:intergenic | 55.0% | |
| TCAGGGCTAGGATGAACACC+GGG | + | chr7_2:80878189-80878208 | None:intergenic | 55.0% | |
| GGTGTTCATCCTAGCCCTGA+TGG | - | chr7_2:80878189-80878208 | Msa1081130:intron | 55.0% | |
| GATGCTACCTCTGCACCATC+AGG | + | chr7_2:80878207-80878226 | None:intergenic | 55.0% | |
| GTGCATATGTAAAGCGGGGG+AGG | - | chr7_2:80878299-80878318 | Msa1081130:intron | 55.0% | |
| TCTTTGTGCCCAGTGGTTGG+TGG | - | chr7_2:80878325-80878344 | Msa1081130:intron | 55.0% | |
| CACCAAATGCCACCAACCAC+TGG | + | chr7_2:80878337-80878356 | None:intergenic | 55.0% | |
| GGCGCGAACCTTCACAAAGT+CGG | - | chr7_2:80878894-80878913 | Msa1081130:CDS | 55.0% | |
| AAGGGGCTCCGACTTTGTGA+AGG | + | chr7_2:80878905-80878924 | None:intergenic | 55.0% | |
| ACAAAGTCGGAGCCCCTTCT+AGG | - | chr7_2:80878907-80878926 | Msa1081130:CDS | 55.0% | |
| AACACCGTGGGTGTGTGACG+GGG | + | chr7_2:80877287-80877306 | None:intergenic | 60.0% | |
| GAACACCGTGGGTGTGTGAC+GGG | + | chr7_2:80877288-80877307 | None:intergenic | 60.0% | |
| ACCCACGGTGTTCAGCCCTT+AGG | - | chr7_2:80877295-80877314 | Msa1081130:CDS | 60.0% | |
| GCCTAAGGGCTGAACACCGT+GGG | + | chr7_2:80877299-80877318 | None:intergenic | 60.0% | |
| TGCCTAAGGGCTGAACACCG+TGG | + | chr7_2:80877300-80877319 | None:intergenic | 60.0% | |
| CCTCCCGATGTTATTCCGCC+CGG | - | chr7_2:80878168-80878187 | Msa1081130:intron | 60.0% | |
| ! | TCCTAGCCCTGATGGTGCAG+AGG | - | chr7_2:80878197-80878216 | Msa1081130:intron | 60.0% |
| ACCTCTGCACCATCAGGGCT+AGG | + | chr7_2:80878201-80878220 | None:intergenic | 60.0% | |
| !! | GCCCAGTGGTTGGTGGCATT+TGG | - | chr7_2:80878332-80878351 | Msa1081130:intron | 60.0% |
| TCTGCCCCGTCACACACCCA+CGG | - | chr7_2:80877280-80877299 | Msa1081130:CDS | 65.0% | |
| CCGGGCGGAATAACATCGGG+AGG | + | chr7_2:80878171-80878190 | None:intergenic | 65.0% | |
| GGGCTAGGATGAACACCGGG+CGG | + | chr7_2:80878186-80878205 | None:intergenic | 65.0% | |
| GAGGCCGAACGCAAGCACAC+TGG | - | chr7_2:80879434-80879453 | Msa1081130:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 80876952 | 80879953 | 80876952 | ID=Msa1081130;Name=Msa1081130 |
| chr7_2 | mRNA | 80876952 | 80879953 | 80876952 | ID=Msa1081130-mRNA-1;Parent=Msa1081130;Name=Msa1081130-mRNA-1;_AED=0.03;_eAED=0.03;_QI=64|1|1|1|1|1|2|312|542 |
| chr7_2 | exon | 80876952 | 80877504 | 80876952 | ID=Msa1081130-mRNA-1:exon:20566;Parent=Msa1081130-mRNA-1 |
| chr7_2 | exon | 80878502 | 80879953 | 80878502 | ID=Msa1081130-mRNA-1:exon:20565;Parent=Msa1081130-mRNA-1 |
| chr7_2 | five_prime_UTR | 80879890 | 80879953 | 80879890 | ID=Msa1081130-mRNA-1:five_prime_utr;Parent=Msa1081130-mRNA-1 |
| chr7_2 | CDS | 80878502 | 80879889 | 80878502 | ID=Msa1081130-mRNA-1:cds;Parent=Msa1081130-mRNA-1 |
| chr7_2 | CDS | 80877264 | 80877504 | 80877264 | ID=Msa1081130-mRNA-1:cds;Parent=Msa1081130-mRNA-1 |
| chr7_2 | three_prime_UTR | 80876952 | 80877263 | 80876952 | ID=Msa1081130-mRNA-1:three_prime_utr;Parent=Msa1081130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
