Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085780 | XP_039683937.1 | 86.131 | 411 | 9 | 1 | 74 | 436 | 375 | 785 | 0.0 | 730 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085780 | sp|Q9SWG3|FAR1_ARATH | 37.333 | 300 | 184 | 3 | 140 | 436 | 122 | 420 | 1.24e-66 | 230 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085780 | Q2HSZ7 | 86.683 | 398 | 5 | 1 | 87 | 436 | 318 | 715 | 0.0 | 712 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1085780 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085780 | MtrunA17_Chr2g0296781 | 79.624 | 319 | 65 | 0 | 118 | 436 | 42 | 360 | 0.0 | 562 |
| Msa1085780 | MtrunA17_Chr6g0477261 | 87.097 | 248 | 32 | 0 | 189 | 436 | 2 | 249 | 2.89e-162 | 472 |
| Msa1085780 | MtrunA17_Chr1g0196541 | 64.577 | 319 | 113 | 0 | 118 | 436 | 42 | 360 | 1.77e-153 | 452 |
| Msa1085780 | MtrunA17_Chr5g0441581 | 50.943 | 318 | 148 | 1 | 119 | 436 | 79 | 388 | 1.63e-112 | 345 |
| Msa1085780 | MtrunA17_Chr1g0202341 | 38.871 | 319 | 188 | 5 | 121 | 436 | 105 | 419 | 8.62e-75 | 247 |
| Msa1085780 | MtrunA17_Chr2g0291581 | 41.077 | 297 | 165 | 2 | 140 | 436 | 138 | 424 | 1.20e-73 | 244 |
| Msa1085780 | MtrunA17_Chr2g0291591 | 36.027 | 297 | 190 | 0 | 140 | 436 | 131 | 427 | 1.12e-71 | 236 |
| Msa1085780 | MtrunA17_Chr5g0448761 | 37.855 | 317 | 188 | 7 | 127 | 436 | 121 | 435 | 1.82e-68 | 232 |
| Msa1085780 | MtrunA17_Chr2g0329031 | 35.987 | 314 | 184 | 3 | 129 | 436 | 71 | 373 | 1.48e-66 | 226 |
| Msa1085780 | MtrunA17_Chr1g0207551 | 36.577 | 298 | 188 | 1 | 140 | 436 | 103 | 400 | 1.36e-65 | 224 |
| Msa1085780 | MtrunA17_Chr8g0363841 | 37.333 | 300 | 183 | 3 | 140 | 436 | 88 | 385 | 5.47e-62 | 212 |
| Msa1085780 | MtrunA17_Chr3g0080351 | 35.647 | 317 | 180 | 4 | 121 | 436 | 141 | 434 | 2.60e-59 | 207 |
| Msa1085780 | MtrunA17_Chr2g0324011 | 33.000 | 300 | 198 | 3 | 139 | 436 | 80 | 378 | 4.76e-55 | 192 |
| Msa1085780 | MtrunA17_Chr2g0287651 | 32.776 | 299 | 195 | 3 | 140 | 436 | 147 | 441 | 2.76e-52 | 188 |
| Msa1085780 | MtrunA17_Chr5g0440451 | 31.667 | 360 | 206 | 9 | 105 | 436 | 69 | 416 | 9.41e-51 | 184 |
| Msa1085780 | MtrunA17_Chr5g0448511 | 39.904 | 208 | 123 | 2 | 230 | 436 | 1 | 207 | 5.47e-50 | 177 |
| Msa1085780 | MtrunA17_Chr3g0118611 | 41.206 | 199 | 110 | 2 | 242 | 436 | 118 | 313 | 2.76e-48 | 176 |
| Msa1085780 | MtrunA17_Chr1g0203721 | 31.290 | 310 | 203 | 4 | 134 | 436 | 128 | 434 | 1.52e-46 | 172 |
| Msa1085780 | MtrunA17_Chr1g0203051 | 28.931 | 318 | 218 | 5 | 121 | 436 | 132 | 443 | 1.61e-46 | 169 |
| Msa1085780 | MtrunA17_Chr1g0198761 | 31.672 | 341 | 215 | 9 | 103 | 430 | 85 | 420 | 7.60e-45 | 166 |
| Msa1085780 | MtrunA17_Chr2g0287061 | 31.077 | 325 | 185 | 6 | 118 | 436 | 222 | 513 | 1.59e-44 | 166 |
| Msa1085780 | MtrunA17_Chr6g0458391 | 29.450 | 309 | 196 | 5 | 131 | 436 | 287 | 576 | 1.70e-43 | 162 |
| Msa1085780 | MtrunA17_Chr5g0431001 | 30.508 | 354 | 213 | 11 | 100 | 430 | 91 | 434 | 5.07e-43 | 158 |
| Msa1085780 | MtrunA17_Chr1g0164591 | 32.770 | 296 | 179 | 10 | 149 | 436 | 1 | 284 | 1.21e-42 | 153 |
| Msa1085780 | MtrunA17_Chr2g0276841 | 30.211 | 331 | 207 | 9 | 119 | 433 | 119 | 441 | 7.87e-41 | 154 |
| Msa1085780 | MtrunA17_Chr7g0258861 | 35.714 | 210 | 132 | 2 | 139 | 345 | 80 | 289 | 2.09e-40 | 146 |
| Msa1085780 | MtrunA17_Chr3g0082121 | 33.770 | 305 | 180 | 11 | 140 | 436 | 114 | 404 | 4.92e-39 | 149 |
| Msa1085780 | MtrunA17_Chr2g0294841 | 31.502 | 273 | 181 | 5 | 166 | 434 | 150 | 420 | 4.79e-38 | 146 |
| Msa1085780 | MtrunA17_Chr2g0290391 | 24.522 | 314 | 210 | 10 | 138 | 430 | 120 | 427 | 9.65e-25 | 107 |
| Msa1085780 | MtrunA17_Chr6g0451441 | 29.134 | 127 | 88 | 1 | 108 | 234 | 123 | 247 | 8.35e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1085780 | AT4G15090.1 | 37.333 | 300 | 184 | 3 | 140 | 436 | 122 | 420 | 1.27e-67 | 230 |
| Msa1085780 | AT4G15090.5 | 37.333 | 300 | 184 | 3 | 140 | 436 | 122 | 420 | 1.27e-67 | 230 |
| Msa1085780 | AT4G15090.3 | 37.333 | 300 | 184 | 3 | 140 | 436 | 122 | 420 | 1.27e-67 | 230 |
| Msa1085780 | AT4G15090.2 | 37.333 | 300 | 184 | 3 | 140 | 436 | 122 | 420 | 1.27e-67 | 230 |
| Msa1085780 | AT4G15090.4 | 37.333 | 300 | 184 | 3 | 140 | 436 | 122 | 420 | 1.27e-67 | 230 |
| Msa1085780 | AT4G38180.1 | 35.873 | 315 | 193 | 4 | 127 | 436 | 134 | 444 | 3.10e-66 | 226 |
| Msa1085780 | AT1G76320.3 | 35.514 | 321 | 196 | 4 | 119 | 436 | 45 | 357 | 1.47e-59 | 206 |
| Msa1085780 | AT1G76320.2 | 35.514 | 321 | 196 | 4 | 119 | 436 | 45 | 357 | 2.93e-59 | 206 |
| Msa1085780 | AT1G76320.1 | 35.514 | 321 | 196 | 4 | 119 | 436 | 45 | 357 | 3.50e-59 | 206 |
| Msa1085780 | AT1G76320.4 | 35.514 | 321 | 196 | 4 | 119 | 436 | 45 | 357 | 3.50e-59 | 206 |
| Msa1085780 | AT1G52520.1 | 35.786 | 299 | 180 | 4 | 140 | 436 | 152 | 440 | 7.54e-59 | 205 |
| Msa1085780 | AT1G80010.1 | 34.211 | 304 | 189 | 5 | 140 | 434 | 162 | 463 | 2.06e-57 | 201 |
| Msa1085780 | AT3G22170.2 | 33.438 | 317 | 188 | 3 | 121 | 436 | 135 | 429 | 3.24e-57 | 202 |
| Msa1085780 | AT3G22170.1 | 33.438 | 317 | 188 | 3 | 121 | 436 | 135 | 429 | 3.24e-57 | 202 |
| Msa1085780 | AT2G27110.2 | 36.913 | 298 | 170 | 7 | 143 | 436 | 108 | 391 | 9.80e-55 | 195 |
| Msa1085780 | AT2G27110.1 | 36.913 | 298 | 170 | 7 | 143 | 436 | 108 | 391 | 9.80e-55 | 195 |
| Msa1085780 | AT2G27110.3 | 38.843 | 242 | 137 | 4 | 197 | 436 | 14 | 246 | 1.19e-51 | 185 |
| Msa1085780 | AT2G32250.5 | 42.857 | 189 | 107 | 1 | 249 | 436 | 176 | 364 | 1.33e-48 | 177 |
| Msa1085780 | AT2G32250.8 | 42.857 | 189 | 107 | 1 | 249 | 436 | 135 | 323 | 1.60e-48 | 177 |
| Msa1085780 | AT2G32250.7 | 42.857 | 189 | 107 | 1 | 249 | 436 | 135 | 323 | 1.67e-48 | 177 |
| Msa1085780 | AT2G32250.2 | 42.857 | 189 | 107 | 1 | 249 | 436 | 176 | 364 | 1.84e-48 | 177 |
| Msa1085780 | AT2G32250.4 | 42.857 | 189 | 107 | 1 | 249 | 436 | 176 | 364 | 1.84e-48 | 177 |
| Msa1085780 | AT2G32250.6 | 42.857 | 189 | 107 | 1 | 249 | 436 | 176 | 364 | 1.84e-48 | 177 |
| Msa1085780 | AT2G32250.1 | 42.857 | 189 | 107 | 1 | 249 | 436 | 176 | 364 | 1.84e-48 | 177 |
| Msa1085780 | AT2G32250.3 | 42.857 | 189 | 107 | 1 | 249 | 436 | 176 | 364 | 1.84e-48 | 177 |
| Msa1085780 | AT3G06250.2 | 30.938 | 320 | 189 | 6 | 118 | 436 | 229 | 517 | 3.70e-46 | 170 |
| Msa1085780 | AT3G06250.1 | 30.938 | 320 | 189 | 6 | 118 | 436 | 229 | 517 | 3.70e-46 | 170 |
| Msa1085780 | AT3G06250.3 | 30.938 | 320 | 189 | 6 | 118 | 436 | 229 | 517 | 3.70e-46 | 170 |
| Msa1085780 | AT5G18960.2 | 31.889 | 323 | 185 | 7 | 118 | 436 | 250 | 541 | 3.77e-45 | 167 |
| Msa1085780 | AT5G18960.1 | 31.889 | 323 | 185 | 7 | 118 | 436 | 250 | 541 | 3.77e-45 | 167 |
| Msa1085780 | AT4G19990.1 | 40.865 | 208 | 117 | 4 | 232 | 436 | 107 | 311 | 9.97e-45 | 166 |
| Msa1085780 | AT4G19990.5 | 40.865 | 208 | 117 | 4 | 232 | 436 | 164 | 368 | 1.39e-44 | 166 |
| Msa1085780 | AT4G19990.7 | 40.865 | 208 | 117 | 4 | 232 | 436 | 178 | 382 | 1.42e-44 | 166 |
| Msa1085780 | AT4G19990.3 | 40.865 | 208 | 117 | 4 | 232 | 436 | 164 | 368 | 1.44e-44 | 166 |
| Msa1085780 | AT4G19990.4 | 40.865 | 208 | 117 | 4 | 232 | 436 | 164 | 368 | 1.44e-44 | 166 |
| Msa1085780 | AT4G19990.6 | 40.865 | 208 | 117 | 4 | 232 | 436 | 164 | 368 | 2.13e-44 | 165 |
| Msa1085780 | AT4G19990.2 | 40.865 | 208 | 117 | 4 | 232 | 436 | 164 | 368 | 2.13e-44 | 165 |
| Msa1085780 | AT4G38170.1 | 37.255 | 204 | 116 | 4 | 238 | 436 | 13 | 209 | 1.46e-39 | 149 |
| Msa1085780 | AT1G10240.2 | 29.316 | 307 | 196 | 8 | 140 | 433 | 121 | 419 | 4.48e-36 | 141 |
| Msa1085780 | AT1G10240.1 | 29.316 | 307 | 196 | 8 | 140 | 433 | 121 | 419 | 4.48e-36 | 141 |
| Msa1085780 | AT5G28530.1 | 24.675 | 308 | 201 | 7 | 146 | 425 | 122 | 426 | 2.89e-27 | 115 |
| Msa1085780 | AT5G28530.3 | 24.675 | 308 | 201 | 7 | 146 | 425 | 122 | 426 | 3.09e-27 | 115 |
| Msa1085780 | AT5G28530.2 | 24.675 | 308 | 201 | 7 | 146 | 425 | 122 | 426 | 3.09e-27 | 115 |
| Msa1085780 | AT5G28530.4 | 30.435 | 115 | 73 | 3 | 315 | 425 | 252 | 363 | 3.69e-12 | 68.9 |
| Msa1085780 | AT5G28530.5 | 30.435 | 115 | 73 | 3 | 315 | 425 | 252 | 363 | 3.70e-12 | 68.9 |
Find 71 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATCTTGGTCAGTAATTA+TGG | 0.209922 | 7_2:-86757481 | None:intergenic |
| GTCGTTTGCGAAATGTATTC+TGG | 0.220344 | 7_2:+86757229 | Msa1085780:CDS |
| CACCATCGATGGCGAGCTTT+TGG | 0.238537 | 7_2:-86757534 | None:intergenic |
| TTCGAGCATATCTGATTTCA+TGG | 0.264868 | 7_2:+86757653 | Msa1085780:CDS |
| CCTTCTTCATTGCTCTATCT+TGG | 0.275947 | 7_2:-86757494 | None:intergenic |
| CCGTATCCTCATTCGACAAT+AGG | 0.297761 | 7_2:-86757398 | None:intergenic |
| TTTGTGGCATTTAATGAAAA+AGG | 0.306478 | 7_2:+86757557 | Msa1085780:CDS |
| AAAAGAAGAGAGGAGAAATA+TGG | 0.309534 | 7_2:-86755891 | None:intergenic |
| AAGCAGAAATTTCCGATCTA+TGG | 0.310416 | 7_2:+86757026 | Msa1085780:CDS |
| AGGGCTGCTTATGAGTATTT+TGG | 0.315150 | 7_2:+86757267 | Msa1085780:CDS |
| AGCCATACACTGTGCTCTTA+TGG | 0.342605 | 7_2:-86756833 | None:intergenic |
| GGATATGATAATCTTACATT+TGG | 0.343496 | 7_2:+86757063 | Msa1085780:CDS |
| TGTGCTCTTATGGTAGGATT+TGG | 0.353524 | 7_2:-86756823 | None:intergenic |
| CGTATCCTCATTCGACAATA+GGG | 0.366937 | 7_2:-86757397 | None:intergenic |
| AATATGTCTATGTCTTTAGA+TGG | 0.377645 | 7_2:+86756862 | Msa1085780:CDS |
| ATTTGGACCCTCATACAAAA+AGG | 0.378123 | 7_2:+86756968 | Msa1085780:CDS |
| GTGGAATTGAATGTTGAAAC+AGG | 0.386950 | 7_2:-86756384 | None:intergenic |
| TGGTCAGTAATTATGGCATT+TGG | 0.404502 | 7_2:-86757474 | None:intergenic |
| ATATTTATTTGTTAAATAAG+TGG | 0.416959 | 7_2:-86757310 | None:intergenic |
| TTATGTGATCAACCTCCTCT+TGG | 0.424715 | 7_2:-86756559 | None:intergenic |
| CATGATAATGAATGGTTGTA+AGG | 0.443131 | 7_2:+86757711 | Msa1085780:CDS |
| GTTGCTCTTGAGCATAATCA+TGG | 0.447972 | 7_2:+86756904 | Msa1085780:CDS |
| TGGTAGGATTTGGTTTCAAA+AGG | 0.448606 | 7_2:-86756813 | None:intergenic |
| CTCGCCATCGATGGTGTTTG+TGG | 0.452930 | 7_2:+86757541 | Msa1085780:CDS |
| TGATGATTGACTCCAACAAA+AGG | 0.455391 | 7_2:-86757348 | None:intergenic |
| GAAGCAAATATTGTTCAAGC+AGG | 0.462377 | 7_2:+86756605 | Msa1085780:CDS |
| AAATTATTCTTACTTGCTTG+TGG | 0.469619 | 7_2:-86756403 | None:intergenic |
| ACTCCAACAAAAGGGGCAAA+AGG | 0.489968 | 7_2:-86757339 | None:intergenic |
| TACCATAAGAGCACAGTGTA+TGG | 0.490683 | 7_2:+86756831 | Msa1085780:CDS |
| TCTGGGTAGATGCGAGATGT+AGG | 0.494755 | 7_2:+86757247 | Msa1085780:CDS |
| TCGTTTGCGAAATGTATTCT+GGG | 0.501285 | 7_2:+86757230 | Msa1085780:CDS |
| TCTATGGTTGTTGAAGCAAA+TGG | 0.501556 | 7_2:+86757042 | Msa1085780:CDS |
| CCTATTGTCGAATGAGGATA+CGG | 0.509576 | 7_2:+86757398 | Msa1085780:CDS |
| GATGATTGACTCCAACAAAA+GGG | 0.511990 | 7_2:-86757347 | None:intergenic |
| CTGGGTAGATGCGAGATGTA+GGG | 0.525010 | 7_2:+86757248 | Msa1085780:CDS |
| AAAGCAAGACGGCTTCCACT+TGG | 0.525234 | 7_2:+86757114 | Msa1085780:CDS |
| CGCTGTTGTATTCACCGCCA+CGG | 0.531935 | 7_2:+86756289 | Msa1085780:CDS |
| AGCAATGAAGAAGGCAATTG+AGG | 0.534217 | 7_2:+86757503 | Msa1085780:CDS |
| AGACGGCTTCCACTTGGGAT+AGG | 0.537811 | 7_2:+86757120 | Msa1085780:CDS |
| AAGCAAGACGGCTTCCACTT+GGG | 0.540758 | 7_2:+86757115 | Msa1085780:CDS |
| GGTGAATACAACAGCGGCGA+TGG | 0.541955 | 7_2:-86756282 | None:intergenic |
| AGTAAAGTGATGTTTGAGGA+TGG | 0.543909 | 7_2:-86756353 | None:intergenic |
| TCAAAGTAAAGTGATGTTTG+AGG | 0.547191 | 7_2:-86756357 | None:intergenic |
| TTCCAAAAGCTCGCCATCGA+TGG | 0.547197 | 7_2:+86757532 | Msa1085780:CDS |
| CCAAGATAGAGCAATGAAGA+AGG | 0.549366 | 7_2:+86757494 | Msa1085780:CDS |
| CAGACAACAACGGCGACGAA+AGG | 0.551224 | 7_2:-86756254 | None:intergenic |
| TTGCTTCAACAACCATAGAT+CGG | 0.559940 | 7_2:-86757038 | None:intergenic |
| TTTCTTGGCTGTTCAAAACA+TGG | 0.566689 | 7_2:+86757427 | Msa1085780:CDS |
| TTCAAAATCGAAAAGAAGAG+AGG | 0.567717 | 7_2:-86755901 | None:intergenic |
| TACTTCTTCTGTCCAAGAGG+AGG | 0.573867 | 7_2:+86756547 | Msa1085780:CDS |
| TATCTGATTTCATGGAGAAG+TGG | 0.590848 | 7_2:+86757661 | Msa1085780:CDS |
| ATACACTGTGCTCTTATGGT+AGG | 0.596198 | 7_2:-86756829 | None:intergenic |
| TTGTGCCCTATTGTCGAATG+AGG | 0.600198 | 7_2:+86757392 | Msa1085780:CDS |
| TTAGATATTAATGATCAAGC+TGG | 0.603736 | 7_2:+86756994 | Msa1085780:CDS |
| CAACGGCGACGAAAGGACAA+AGG | 0.617082 | 7_2:-86756247 | None:intergenic |
| TTTGTTGGAGTCAATCATCA+CGG | 0.624437 | 7_2:+86757351 | Msa1085780:CDS |
| ATGATTGACTCCAACAAAAG+GGG | 0.626051 | 7_2:-86757346 | None:intergenic |
| ATGATAATGAATGGTTGTAA+GGG | 0.634144 | 7_2:+86757712 | Msa1085780:CDS |
| ACATGGTTAGAATGCATGCA+TGG | 0.634260 | 7_2:+86757444 | Msa1085780:CDS |
| TCAGCATCTCCTATCCCAAG+TGG | 0.637487 | 7_2:-86757129 | None:intergenic |
| AATGCCACAAACACCATCGA+TGG | 0.638359 | 7_2:-86757545 | None:intergenic |
| ACGAACTGCATGATAATGAA+TGG | 0.646085 | 7_2:+86757703 | Msa1085780:CDS |
| TAGTTGTGCGGCGAGAACCG+TGG | 0.647045 | 7_2:-86756306 | None:intergenic |
| ATCTACTTCTTCTGTCCAAG+AGG | 0.647824 | 7_2:+86756544 | Msa1085780:CDS |
| GGAATTGAATGTTGAAACAG+GGG | 0.654531 | 7_2:-86756382 | None:intergenic |
| TGGAATTGAATGTTGAAACA+GGG | 0.655246 | 7_2:-86756383 | None:intergenic |
| ATTACATTGACAAAGCAAGA+CGG | 0.657095 | 7_2:+86757103 | Msa1085780:CDS |
| GATATGCAGTTATAGTTGTG+CGG | 0.693838 | 7_2:-86756318 | None:intergenic |
| TTGTGCGGCGAGAACCGTGG+CGG | 0.697644 | 7_2:-86756303 | None:intergenic |
| GATGGTAGAGCAGACAACAA+CGG | 0.709353 | 7_2:-86756264 | None:intergenic |
| CGTGGCGGTGAATACAACAG+CGG | 0.778646 | 7_2:-86756288 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTATTTGTTAAATAAG+TGG | - | chr7_2:86757313-86757332 | None:intergenic | 10.0% |
| !!! | ATATTTATTTGTTAAATAAG+TGG | - | chr7_2:86757313-86757332 | None:intergenic | 10.0% |
| !! | CAAAATCATTAAGAATAAAA+AGG | - | chr7_2:86756128-86756147 | None:intergenic | 15.0% |
| !! | AAAAAAAAATACTTTACTCT+AGG | + | chr7_2:86756751-86756770 | Msa1085780:intron | 15.0% |
| !!! | TAAAATATCTAGATTTTGTT+GGG | - | chr7_2:86756936-86756955 | None:intergenic | 15.0% |
| !! | CAAAATCATTAAGAATAAAA+AGG | - | chr7_2:86756128-86756147 | None:intergenic | 15.0% |
| !! | AAAAAAAAATACTTTACTCT+AGG | + | chr7_2:86756751-86756770 | Msa1085780:intron | 15.0% |
| !!! | TAAAATATCTAGATTTTGTT+GGG | - | chr7_2:86756936-86756955 | None:intergenic | 15.0% |
| !! | GTTTCTTTGTTAAAATAATG+TGG | + | chr7_2:86755967-86755986 | Msa1085780:intron | 20.0% |
| !! | TAATCAACTAAATTAACAAG+TGG | - | chr7_2:86756478-86756497 | None:intergenic | 20.0% |
| !! | AATCAATTCAAAAAATGCAA+AGG | + | chr7_2:86756724-86756743 | Msa1085780:intron | 20.0% |
| !!! | CTAAAATATCTAGATTTTGT+TGG | - | chr7_2:86756937-86756956 | None:intergenic | 20.0% |
| !!! | TTTTAGATGCAATAAGAATT+TGG | + | chr7_2:86756951-86756970 | Msa1085780:CDS | 20.0% |
| !!! | TAGTCAATTTTATTATGTGA+TGG | + | chr7_2:86757191-86757210 | Msa1085780:CDS | 20.0% |
| !! | GTTTCTTTGTTAAAATAATG+TGG | + | chr7_2:86755967-86755986 | Msa1085780:intron | 20.0% |
| !! | TAATCAACTAAATTAACAAG+TGG | - | chr7_2:86756478-86756497 | None:intergenic | 20.0% |
| !! | AATCAATTCAAAAAATGCAA+AGG | + | chr7_2:86756724-86756743 | Msa1085780:intron | 20.0% |
| !!! | CTAAAATATCTAGATTTTGT+TGG | - | chr7_2:86756937-86756956 | None:intergenic | 20.0% |
| !!! | TTTTAGATGCAATAAGAATT+TGG | + | chr7_2:86756951-86756970 | Msa1085780:CDS | 20.0% |
| !!! | TAGTCAATTTTATTATGTGA+TGG | + | chr7_2:86757191-86757210 | Msa1085780:CDS | 20.0% |
| ! | AAATTATTCTTACTTGCTTG+TGG | - | chr7_2:86756406-86756425 | None:intergenic | 25.0% |
| ! | ACAAGCAAGTAAGAATAATT+TGG | + | chr7_2:86756405-86756424 | Msa1085780:intron | 25.0% |
| !! | TGTAAAATTTTCTGCATTAG+TGG | + | chr7_2:86756514-86756533 | Msa1085780:CDS | 25.0% |
| ! | AATTCAAAAAATGCAAAGGA+TGG | + | chr7_2:86756728-86756747 | Msa1085780:intron | 25.0% |
| ! | AATATGTCTATGTCTTTAGA+TGG | + | chr7_2:86756862-86756881 | Msa1085780:CDS | 25.0% |
| ! | TTAGATATTAATGATCAAGC+TGG | + | chr7_2:86756994-86757013 | Msa1085780:CDS | 25.0% |
| ! | GGATATGATAATCTTACATT+TGG | + | chr7_2:86757063-86757082 | Msa1085780:CDS | 25.0% |
| !!! | ATTTTATTATGTGATGGATG+TGG | + | chr7_2:86757197-86757216 | Msa1085780:CDS | 25.0% |
| ! | TTTGTGGCATTTAATGAAAA+AGG | + | chr7_2:86757557-86757576 | Msa1085780:CDS | 25.0% |
| ! | AAATTATTCTTACTTGCTTG+TGG | - | chr7_2:86756406-86756425 | None:intergenic | 25.0% |
| ! | ACAAGCAAGTAAGAATAATT+TGG | + | chr7_2:86756405-86756424 | Msa1085780:intron | 25.0% |
| !! | TGTAAAATTTTCTGCATTAG+TGG | + | chr7_2:86756514-86756533 | Msa1085780:CDS | 25.0% |
| ! | AATTCAAAAAATGCAAAGGA+TGG | + | chr7_2:86756728-86756747 | Msa1085780:intron | 25.0% |
| ! | AATATGTCTATGTCTTTAGA+TGG | + | chr7_2:86756862-86756881 | Msa1085780:CDS | 25.0% |
| ! | TTAGATATTAATGATCAAGC+TGG | + | chr7_2:86756994-86757013 | Msa1085780:CDS | 25.0% |
| ! | GGATATGATAATCTTACATT+TGG | + | chr7_2:86757063-86757082 | Msa1085780:CDS | 25.0% |
| !!! | ATTTTATTATGTGATGGATG+TGG | + | chr7_2:86757197-86757216 | Msa1085780:CDS | 25.0% |
| ! | TTTGTGGCATTTAATGAAAA+AGG | + | chr7_2:86757557-86757576 | Msa1085780:CDS | 25.0% |
| AAAAGAAGAGAGGAGAAATA+TGG | - | chr7_2:86755894-86755913 | None:intergenic | 30.0% | |
| TTCAAAATCGAAAAGAAGAG+AGG | - | chr7_2:86755904-86755923 | None:intergenic | 30.0% | |
| ! | TTCTTTTCGATTTTGAACTC+TGG | + | chr7_2:86755907-86755926 | Msa1085780:CDS | 30.0% |
| TCAAAGTAAAGTGATGTTTG+AGG | - | chr7_2:86756360-86756379 | None:intergenic | 30.0% | |
| TGGAATTGAATGTTGAAACA+GGG | - | chr7_2:86756386-86756405 | None:intergenic | 30.0% | |
| ! | ATTTTCTGCATTAGTGGAAA+CGG | + | chr7_2:86756520-86756539 | Msa1085780:CDS | 30.0% |
| ATTACATTGACAAAGCAAGA+CGG | + | chr7_2:86757103-86757122 | Msa1085780:CDS | 30.0% | |
| TCTATCTTGGTCAGTAATTA+TGG | - | chr7_2:86757484-86757503 | None:intergenic | 30.0% | |
| GCATTTAATGAAAAAGGTTC+CGG | + | chr7_2:86757563-86757582 | Msa1085780:CDS | 30.0% | |
| AAAAGAAGAGAGGAGAAATA+TGG | - | chr7_2:86755894-86755913 | None:intergenic | 30.0% | |
| TTCAAAATCGAAAAGAAGAG+AGG | - | chr7_2:86755904-86755923 | None:intergenic | 30.0% | |
| ! | TTCTTTTCGATTTTGAACTC+TGG | + | chr7_2:86755907-86755926 | Msa1085780:CDS | 30.0% |
| TCAAAGTAAAGTGATGTTTG+AGG | - | chr7_2:86756360-86756379 | None:intergenic | 30.0% | |
| TGGAATTGAATGTTGAAACA+GGG | - | chr7_2:86756386-86756405 | None:intergenic | 30.0% | |
| ! | ATTTTCTGCATTAGTGGAAA+CGG | + | chr7_2:86756520-86756539 | Msa1085780:CDS | 30.0% |
| ATTACATTGACAAAGCAAGA+CGG | + | chr7_2:86757103-86757122 | Msa1085780:CDS | 30.0% | |
| TCTATCTTGGTCAGTAATTA+TGG | - | chr7_2:86757484-86757503 | None:intergenic | 30.0% | |
| GCATTTAATGAAAAAGGTTC+CGG | + | chr7_2:86757563-86757582 | Msa1085780:CDS | 30.0% | |
| ! | ATTTTGAACTCTGGTTGAAG+AGG | + | chr7_2:86755916-86755935 | Msa1085780:CDS | 35.0% |
| ! | TTTTGAACTCTGGTTGAAGA+GGG | + | chr7_2:86755917-86755936 | Msa1085780:CDS | 35.0% |
| TGAGATCAATCAATAAGTGG+CGG | - | chr7_2:86756211-86756230 | None:intergenic | 35.0% | |
| TGGTGAGATCAATCAATAAG+TGG | - | chr7_2:86756214-86756233 | None:intergenic | 35.0% | |
| ACAAAGGTCTGTAGAATTGA+TGG | - | chr7_2:86756234-86756253 | None:intergenic | 35.0% | |
| GATATGCAGTTATAGTTGTG+CGG | - | chr7_2:86756321-86756340 | None:intergenic | 35.0% | |
| AGTAAAGTGATGTTTGAGGA+TGG | - | chr7_2:86756356-86756375 | None:intergenic | 35.0% | |
| GGAATTGAATGTTGAAACAG+GGG | - | chr7_2:86756385-86756404 | None:intergenic | 35.0% | |
| GTGGAATTGAATGTTGAAAC+AGG | - | chr7_2:86756387-86756406 | None:intergenic | 35.0% | |
| ! | TTTTCTGCATTAGTGGAAAC+GGG | + | chr7_2:86756521-86756540 | Msa1085780:CDS | 35.0% |
| GAAGCAAATATTGTTCAAGC+AGG | + | chr7_2:86756605-86756624 | Msa1085780:CDS | 35.0% | |
| AAATATTGTTCAAGCAGGTG+AGG | + | chr7_2:86756610-86756629 | Msa1085780:intron | 35.0% | |
| AGCACAGCTCTTGTAATATT+TGG | - | chr7_2:86756678-86756697 | None:intergenic | 35.0% | |
| ! | TGGTAGGATTTGGTTTCAAA+AGG | - | chr7_2:86756816-86756835 | None:intergenic | 35.0% |
| ATTTGGACCCTCATACAAAA+AGG | + | chr7_2:86756968-86756987 | Msa1085780:CDS | 35.0% | |
| ! | CTAACCTCCTTTTTGTATGA+GGG | - | chr7_2:86756978-86756997 | None:intergenic | 35.0% |
| ! | TCTAACCTCCTTTTTGTATG+AGG | - | chr7_2:86756979-86756998 | None:intergenic | 35.0% |
| AAGCAGAAATTTCCGATCTA+TGG | + | chr7_2:86757026-86757045 | Msa1085780:CDS | 35.0% | |
| TTGCTTCAACAACCATAGAT+CGG | - | chr7_2:86757041-86757060 | None:intergenic | 35.0% | |
| TCTATGGTTGTTGAAGCAAA+TGG | + | chr7_2:86757042-86757061 | Msa1085780:CDS | 35.0% | |
| TCGTTTGCGAAATGTATTCT+GGG | + | chr7_2:86757230-86757249 | Msa1085780:CDS | 35.0% | |
| ! | ATGATTGACTCCAACAAAAG+GGG | - | chr7_2:86757349-86757368 | None:intergenic | 35.0% |
| ! | GATGATTGACTCCAACAAAA+GGG | - | chr7_2:86757350-86757369 | None:intergenic | 35.0% |
| ! | TGATGATTGACTCCAACAAA+AGG | - | chr7_2:86757351-86757370 | None:intergenic | 35.0% |
| TTTGTTGGAGTCAATCATCA+CGG | + | chr7_2:86757351-86757370 | Msa1085780:CDS | 35.0% | |
| !! | TGTTTTGAACAGCCAAGAAA+AGG | - | chr7_2:86757427-86757446 | None:intergenic | 35.0% |
| TTTCTTGGCTGTTCAAAACA+TGG | + | chr7_2:86757427-86757446 | Msa1085780:CDS | 35.0% | |
| TGGTCAGTAATTATGGCATT+TGG | - | chr7_2:86757477-86757496 | None:intergenic | 35.0% | |
| AAAAAGGTTCCGGAAAAGTT+GGG | + | chr7_2:86757573-86757592 | Msa1085780:CDS | 35.0% | |
| TTCGAGCATATCTGATTTCA+TGG | + | chr7_2:86757653-86757672 | Msa1085780:CDS | 35.0% | |
| TATCTGATTTCATGGAGAAG+TGG | + | chr7_2:86757661-86757680 | Msa1085780:CDS | 35.0% | |
| ! | ACGAACTGCATGATAATGAA+TGG | + | chr7_2:86757703-86757722 | Msa1085780:CDS | 35.0% |
| ! | ATTTTGAACTCTGGTTGAAG+AGG | + | chr7_2:86755916-86755935 | Msa1085780:CDS | 35.0% |
| ! | TTTTGAACTCTGGTTGAAGA+GGG | + | chr7_2:86755917-86755936 | Msa1085780:CDS | 35.0% |
| TGAGATCAATCAATAAGTGG+CGG | - | chr7_2:86756211-86756230 | None:intergenic | 35.0% | |
| TGGTGAGATCAATCAATAAG+TGG | - | chr7_2:86756214-86756233 | None:intergenic | 35.0% | |
| ACAAAGGTCTGTAGAATTGA+TGG | - | chr7_2:86756234-86756253 | None:intergenic | 35.0% | |
| GATATGCAGTTATAGTTGTG+CGG | - | chr7_2:86756321-86756340 | None:intergenic | 35.0% | |
| AGTAAAGTGATGTTTGAGGA+TGG | - | chr7_2:86756356-86756375 | None:intergenic | 35.0% | |
| GGAATTGAATGTTGAAACAG+GGG | - | chr7_2:86756385-86756404 | None:intergenic | 35.0% | |
| GTGGAATTGAATGTTGAAAC+AGG | - | chr7_2:86756387-86756406 | None:intergenic | 35.0% | |
| ! | TTTTCTGCATTAGTGGAAAC+GGG | + | chr7_2:86756521-86756540 | Msa1085780:CDS | 35.0% |
| GAAGCAAATATTGTTCAAGC+AGG | + | chr7_2:86756605-86756624 | Msa1085780:CDS | 35.0% | |
| AAATATTGTTCAAGCAGGTG+AGG | + | chr7_2:86756610-86756629 | Msa1085780:intron | 35.0% | |
| AGCACAGCTCTTGTAATATT+TGG | - | chr7_2:86756678-86756697 | None:intergenic | 35.0% | |
| ! | TGGTAGGATTTGGTTTCAAA+AGG | - | chr7_2:86756816-86756835 | None:intergenic | 35.0% |
| ATTTGGACCCTCATACAAAA+AGG | + | chr7_2:86756968-86756987 | Msa1085780:CDS | 35.0% | |
| ! | CTAACCTCCTTTTTGTATGA+GGG | - | chr7_2:86756978-86756997 | None:intergenic | 35.0% |
| ! | TCTAACCTCCTTTTTGTATG+AGG | - | chr7_2:86756979-86756998 | None:intergenic | 35.0% |
| AAGCAGAAATTTCCGATCTA+TGG | + | chr7_2:86757026-86757045 | Msa1085780:CDS | 35.0% | |
| TTGCTTCAACAACCATAGAT+CGG | - | chr7_2:86757041-86757060 | None:intergenic | 35.0% | |
| TCTATGGTTGTTGAAGCAAA+TGG | + | chr7_2:86757042-86757061 | Msa1085780:CDS | 35.0% | |
| TCGTTTGCGAAATGTATTCT+GGG | + | chr7_2:86757230-86757249 | Msa1085780:CDS | 35.0% | |
| ! | ATGATTGACTCCAACAAAAG+GGG | - | chr7_2:86757349-86757368 | None:intergenic | 35.0% |
| ! | GATGATTGACTCCAACAAAA+GGG | - | chr7_2:86757350-86757369 | None:intergenic | 35.0% |
| ! | TGATGATTGACTCCAACAAA+AGG | - | chr7_2:86757351-86757370 | None:intergenic | 35.0% |
| TTTGTTGGAGTCAATCATCA+CGG | + | chr7_2:86757351-86757370 | Msa1085780:CDS | 35.0% | |
| !! | TGTTTTGAACAGCCAAGAAA+AGG | - | chr7_2:86757427-86757446 | None:intergenic | 35.0% |
| TTTCTTGGCTGTTCAAAACA+TGG | + | chr7_2:86757427-86757446 | Msa1085780:CDS | 35.0% | |
| TGGTCAGTAATTATGGCATT+TGG | - | chr7_2:86757477-86757496 | None:intergenic | 35.0% | |
| AAAAAGGTTCCGGAAAAGTT+GGG | + | chr7_2:86757573-86757592 | Msa1085780:CDS | 35.0% | |
| TTCGAGCATATCTGATTTCA+TGG | + | chr7_2:86757653-86757672 | Msa1085780:CDS | 35.0% | |
| TATCTGATTTCATGGAGAAG+TGG | + | chr7_2:86757661-86757680 | Msa1085780:CDS | 35.0% | |
| ! | ACGAACTGCATGATAATGAA+TGG | + | chr7_2:86757703-86757722 | Msa1085780:CDS | 35.0% |
| TCTGTATAATCGTGCTCACA+AGG | - | chr7_2:86756000-86756019 | None:intergenic | 40.0% | |
| ATCTACTTCTTCTGTCCAAG+AGG | + | chr7_2:86756544-86756563 | Msa1085780:CDS | 40.0% | |
| TTATGTGATCAACCTCCTCT+TGG | - | chr7_2:86756562-86756581 | None:intergenic | 40.0% | |
| CTAAATGTCATCCCAATCCT+AGG | - | chr7_2:86756638-86756657 | None:intergenic | 40.0% | |
| AAGAGCTGTGCTAGATGTAT+GGG | + | chr7_2:86756686-86756705 | Msa1085780:intron | 40.0% | |
| ! | TGTGCTAGATGTATGGGTTT+TGG | + | chr7_2:86756692-86756711 | Msa1085780:intron | 40.0% |
| TGTGCTCTTATGGTAGGATT+TGG | - | chr7_2:86756826-86756845 | None:intergenic | 40.0% | |
| ATACACTGTGCTCTTATGGT+AGG | - | chr7_2:86756832-86756851 | None:intergenic | 40.0% | |
| ! | TACCATAAGAGCACAGTGTA+TGG | + | chr7_2:86756831-86756850 | Msa1085780:CDS | 40.0% |
| GTTGCTCTTGAGCATAATCA+TGG | + | chr7_2:86756904-86756923 | Msa1085780:CDS | 40.0% | |
| GTCGTTTGCGAAATGTATTC+TGG | + | chr7_2:86757229-86757248 | Msa1085780:CDS | 40.0% | |
| ! | AGGGCTGCTTATGAGTATTT+TGG | + | chr7_2:86757267-86757286 | Msa1085780:CDS | 40.0% |
| !!! | CACGGTCAATCAGTTTTGTT+AGG | + | chr7_2:86757369-86757388 | Msa1085780:CDS | 40.0% |
| CGTATCCTCATTCGACAATA+GGG | - | chr7_2:86757400-86757419 | None:intergenic | 40.0% | |
| CCTATTGTCGAATGAGGATA+CGG | + | chr7_2:86757398-86757417 | Msa1085780:CDS | 40.0% | |
| ! | AGGATACGGAAACCTTTTCT+TGG | + | chr7_2:86757412-86757431 | Msa1085780:CDS | 40.0% |
| ACATGGTTAGAATGCATGCA+TGG | + | chr7_2:86757444-86757463 | Msa1085780:CDS | 40.0% | |
| CCTTCTTCATTGCTCTATCT+TGG | - | chr7_2:86757497-86757516 | None:intergenic | 40.0% | |
| CCAAGATAGAGCAATGAAGA+AGG | + | chr7_2:86757494-86757513 | Msa1085780:CDS | 40.0% | |
| AGCAATGAAGAAGGCAATTG+AGG | + | chr7_2:86757503-86757522 | Msa1085780:CDS | 40.0% | |
| GAAAAAGGTTCCGGAAAAGT+TGG | + | chr7_2:86757572-86757591 | Msa1085780:CDS | 40.0% | |
| ! | GAATGACTACCCAACTTTTC+CGG | - | chr7_2:86757585-86757604 | None:intergenic | 40.0% |
| TCTGTATAATCGTGCTCACA+AGG | - | chr7_2:86756000-86756019 | None:intergenic | 40.0% | |
| ATCTACTTCTTCTGTCCAAG+AGG | + | chr7_2:86756544-86756563 | Msa1085780:CDS | 40.0% | |
| TTATGTGATCAACCTCCTCT+TGG | - | chr7_2:86756562-86756581 | None:intergenic | 40.0% | |
| CTAAATGTCATCCCAATCCT+AGG | - | chr7_2:86756638-86756657 | None:intergenic | 40.0% | |
| AAGAGCTGTGCTAGATGTAT+GGG | + | chr7_2:86756686-86756705 | Msa1085780:intron | 40.0% | |
| ! | TGTGCTAGATGTATGGGTTT+TGG | + | chr7_2:86756692-86756711 | Msa1085780:intron | 40.0% |
| TGTGCTCTTATGGTAGGATT+TGG | - | chr7_2:86756826-86756845 | None:intergenic | 40.0% | |
| ATACACTGTGCTCTTATGGT+AGG | - | chr7_2:86756832-86756851 | None:intergenic | 40.0% | |
| ! | TACCATAAGAGCACAGTGTA+TGG | + | chr7_2:86756831-86756850 | Msa1085780:CDS | 40.0% |
| GTTGCTCTTGAGCATAATCA+TGG | + | chr7_2:86756904-86756923 | Msa1085780:CDS | 40.0% | |
| GTCGTTTGCGAAATGTATTC+TGG | + | chr7_2:86757229-86757248 | Msa1085780:CDS | 40.0% | |
| ! | AGGGCTGCTTATGAGTATTT+TGG | + | chr7_2:86757267-86757286 | Msa1085780:CDS | 40.0% |
| !!! | CACGGTCAATCAGTTTTGTT+AGG | + | chr7_2:86757369-86757388 | Msa1085780:CDS | 40.0% |
| CGTATCCTCATTCGACAATA+GGG | - | chr7_2:86757400-86757419 | None:intergenic | 40.0% | |
| CCTATTGTCGAATGAGGATA+CGG | + | chr7_2:86757398-86757417 | Msa1085780:CDS | 40.0% | |
| ! | AGGATACGGAAACCTTTTCT+TGG | + | chr7_2:86757412-86757431 | Msa1085780:CDS | 40.0% |
| ACATGGTTAGAATGCATGCA+TGG | + | chr7_2:86757444-86757463 | Msa1085780:CDS | 40.0% | |
| CCTTCTTCATTGCTCTATCT+TGG | - | chr7_2:86757497-86757516 | None:intergenic | 40.0% | |
| CCAAGATAGAGCAATGAAGA+AGG | + | chr7_2:86757494-86757513 | Msa1085780:CDS | 40.0% | |
| AGCAATGAAGAAGGCAATTG+AGG | + | chr7_2:86757503-86757522 | Msa1085780:CDS | 40.0% | |
| GAAAAAGGTTCCGGAAAAGT+TGG | + | chr7_2:86757572-86757591 | Msa1085780:CDS | 40.0% | |
| ! | GAATGACTACCCAACTTTTC+CGG | - | chr7_2:86757585-86757604 | None:intergenic | 40.0% |
| AGTGGCGGTTAAACTGCATT+TGG | - | chr7_2:86756196-86756215 | None:intergenic | 45.0% | |
| GATGGTAGAGCAGACAACAA+CGG | - | chr7_2:86756267-86756286 | None:intergenic | 45.0% | |
| TACTTCTTCTGTCCAAGAGG+AGG | + | chr7_2:86756547-86756566 | Msa1085780:CDS | 45.0% | |
| CAAGAGCTGTGCTAGATGTA+TGG | + | chr7_2:86756685-86756704 | Msa1085780:intron | 45.0% | |
| AGCCATACACTGTGCTCTTA+TGG | - | chr7_2:86756836-86756855 | None:intergenic | 45.0% | |
| TGGACCCTCATACAAAAAGG+AGG | + | chr7_2:86756971-86756990 | Msa1085780:CDS | 45.0% | |
| ! | ATGCCTTTTGCCCCTTTTGT+TGG | + | chr7_2:86757336-86757355 | Msa1085780:CDS | 45.0% |
| ACTCCAACAAAAGGGGCAAA+AGG | - | chr7_2:86757342-86757361 | None:intergenic | 45.0% | |
| TTGTGCCCTATTGTCGAATG+AGG | + | chr7_2:86757392-86757411 | Msa1085780:CDS | 45.0% | |
| CCGTATCCTCATTCGACAAT+AGG | - | chr7_2:86757401-86757420 | None:intergenic | 45.0% | |
| AATGCCACAAACACCATCGA+TGG | - | chr7_2:86757548-86757567 | None:intergenic | 45.0% | |
| AGTGGCGGTTAAACTGCATT+TGG | - | chr7_2:86756196-86756215 | None:intergenic | 45.0% | |
| GATGGTAGAGCAGACAACAA+CGG | - | chr7_2:86756267-86756286 | None:intergenic | 45.0% | |
| TACTTCTTCTGTCCAAGAGG+AGG | + | chr7_2:86756547-86756566 | Msa1085780:CDS | 45.0% | |
| CAAGAGCTGTGCTAGATGTA+TGG | + | chr7_2:86756685-86756704 | Msa1085780:intron | 45.0% | |
| AGCCATACACTGTGCTCTTA+TGG | - | chr7_2:86756836-86756855 | None:intergenic | 45.0% | |
| TGGACCCTCATACAAAAAGG+AGG | + | chr7_2:86756971-86756990 | Msa1085780:CDS | 45.0% | |
| ! | ATGCCTTTTGCCCCTTTTGT+TGG | + | chr7_2:86757336-86757355 | Msa1085780:CDS | 45.0% |
| ACTCCAACAAAAGGGGCAAA+AGG | - | chr7_2:86757342-86757361 | None:intergenic | 45.0% | |
| TTGTGCCCTATTGTCGAATG+AGG | + | chr7_2:86757392-86757411 | Msa1085780:CDS | 45.0% | |
| CCGTATCCTCATTCGACAAT+AGG | - | chr7_2:86757401-86757420 | None:intergenic | 45.0% | |
| AATGCCACAAACACCATCGA+TGG | - | chr7_2:86757548-86757567 | None:intergenic | 45.0% | |
| GCATTTGGCGCTGTAAACGT+GGG | - | chr7_2:86756181-86756200 | None:intergenic | 50.0% | |
| TGCATTTGGCGCTGTAAACG+TGG | - | chr7_2:86756182-86756201 | None:intergenic | 50.0% | |
| TTCAAGCAGGTGAGGAACCT+AGG | + | chr7_2:86756618-86756637 | Msa1085780:intron | 50.0% | |
| CAGGTGAGGAACCTAGGATT+GGG | + | chr7_2:86756624-86756643 | Msa1085780:intron | 50.0% | |
| AAAGCAAGACGGCTTCCACT+TGG | + | chr7_2:86757114-86757133 | Msa1085780:CDS | 50.0% | |
| AAGCAAGACGGCTTCCACTT+GGG | + | chr7_2:86757115-86757134 | Msa1085780:CDS | 50.0% | |
| TCAGCATCTCCTATCCCAAG+TGG | - | chr7_2:86757132-86757151 | None:intergenic | 50.0% | |
| TCTGGGTAGATGCGAGATGT+AGG | + | chr7_2:86757247-86757266 | Msa1085780:CDS | 50.0% | |
| CTGGGTAGATGCGAGATGTA+GGG | + | chr7_2:86757248-86757267 | Msa1085780:CDS | 50.0% | |
| TTCCAAAAGCTCGCCATCGA+TGG | + | chr7_2:86757532-86757551 | Msa1085780:CDS | 50.0% | |
| GCATTTGGCGCTGTAAACGT+GGG | - | chr7_2:86756181-86756200 | None:intergenic | 50.0% | |
| TGCATTTGGCGCTGTAAACG+TGG | - | chr7_2:86756182-86756201 | None:intergenic | 50.0% | |
| TTCAAGCAGGTGAGGAACCT+AGG | + | chr7_2:86756618-86756637 | Msa1085780:intron | 50.0% | |
| CAGGTGAGGAACCTAGGATT+GGG | + | chr7_2:86756624-86756643 | Msa1085780:intron | 50.0% | |
| AAAGCAAGACGGCTTCCACT+TGG | + | chr7_2:86757114-86757133 | Msa1085780:CDS | 50.0% | |
| AAGCAAGACGGCTTCCACTT+GGG | + | chr7_2:86757115-86757134 | Msa1085780:CDS | 50.0% | |
| TCAGCATCTCCTATCCCAAG+TGG | - | chr7_2:86757132-86757151 | None:intergenic | 50.0% | |
| TCTGGGTAGATGCGAGATGT+AGG | + | chr7_2:86757247-86757266 | Msa1085780:CDS | 50.0% | |
| CTGGGTAGATGCGAGATGTA+GGG | + | chr7_2:86757248-86757267 | Msa1085780:CDS | 50.0% | |
| TTCCAAAAGCTCGCCATCGA+TGG | + | chr7_2:86757532-86757551 | Msa1085780:CDS | 50.0% | |
| CAACGGCGACGAAAGGACAA+AGG | - | chr7_2:86756250-86756269 | None:intergenic | 55.0% | |
| CAGACAACAACGGCGACGAA+AGG | - | chr7_2:86756257-86756276 | None:intergenic | 55.0% | |
| GGTGAATACAACAGCGGCGA+TGG | - | chr7_2:86756285-86756304 | None:intergenic | 55.0% | |
| CGTGGCGGTGAATACAACAG+CGG | - | chr7_2:86756291-86756310 | None:intergenic | 55.0% | |
| CGCTGTTGTATTCACCGCCA+CGG | + | chr7_2:86756289-86756308 | Msa1085780:CDS | 55.0% | |
| GCAGGTGAGGAACCTAGGAT+TGG | + | chr7_2:86756623-86756642 | Msa1085780:intron | 55.0% | |
| AGACGGCTTCCACTTGGGAT+AGG | + | chr7_2:86757120-86757139 | Msa1085780:CDS | 55.0% | |
| ! | CACCATCGATGGCGAGCTTT+TGG | - | chr7_2:86757537-86757556 | None:intergenic | 55.0% |
| CTCGCCATCGATGGTGTTTG+TGG | + | chr7_2:86757541-86757560 | Msa1085780:CDS | 55.0% | |
| CAACGGCGACGAAAGGACAA+AGG | - | chr7_2:86756250-86756269 | None:intergenic | 55.0% | |
| CAGACAACAACGGCGACGAA+AGG | - | chr7_2:86756257-86756276 | None:intergenic | 55.0% | |
| GGTGAATACAACAGCGGCGA+TGG | - | chr7_2:86756285-86756304 | None:intergenic | 55.0% | |
| CGTGGCGGTGAATACAACAG+CGG | - | chr7_2:86756291-86756310 | None:intergenic | 55.0% | |
| CGCTGTTGTATTCACCGCCA+CGG | + | chr7_2:86756289-86756308 | Msa1085780:CDS | 55.0% | |
| GCAGGTGAGGAACCTAGGAT+TGG | + | chr7_2:86756623-86756642 | Msa1085780:intron | 55.0% | |
| AGACGGCTTCCACTTGGGAT+AGG | + | chr7_2:86757120-86757139 | Msa1085780:CDS | 55.0% | |
| ! | CACCATCGATGGCGAGCTTT+TGG | - | chr7_2:86757537-86757556 | None:intergenic | 55.0% |
| CTCGCCATCGATGGTGTTTG+TGG | + | chr7_2:86757541-86757560 | Msa1085780:CDS | 55.0% | |
| TAGTTGTGCGGCGAGAACCG+TGG | - | chr7_2:86756309-86756328 | None:intergenic | 60.0% | |
| TAGTTGTGCGGCGAGAACCG+TGG | - | chr7_2:86756309-86756328 | None:intergenic | 60.0% | |
| TTGTGCGGCGAGAACCGTGG+CGG | - | chr7_2:86756306-86756325 | None:intergenic | 65.0% | |
| TTGTGCGGCGAGAACCGTGG+CGG | - | chr7_2:86756306-86756325 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 86755876 | 86757731 | 86755876 | ID=Msa1085780;Name=Msa1085780 |
| chr7_2 | mRNA | 86755876 | 86757731 | 86755876 | ID=Msa1085780-mRNA-1;Parent=Msa1085780;Name=Msa1085780-mRNA-1;_AED=0.51;_eAED=0.51;_QI=0|0|0|0.25|1|1|4|0|436 |
| chr7_2 | exon | 86755876 | 86755938 | 86755876 | ID=Msa1085780-mRNA-1:exon:23516;Parent=Msa1085780-mRNA-1 |
| chr7_2 | exon | 86756246 | 86756412 | 86756246 | ID=Msa1085780-mRNA-1:exon:23517;Parent=Msa1085780-mRNA-1 |
| chr7_2 | exon | 86756505 | 86756626 | 86756505 | ID=Msa1085780-mRNA-1:exon:23518;Parent=Msa1085780-mRNA-1 |
| chr7_2 | exon | 86756773 | 86757731 | 86756773 | ID=Msa1085780-mRNA-1:exon:23519;Parent=Msa1085780-mRNA-1 |
| chr7_2 | CDS | 86755876 | 86755938 | 86755876 | ID=Msa1085780-mRNA-1:cds;Parent=Msa1085780-mRNA-1 |
| chr7_2 | CDS | 86756246 | 86756412 | 86756246 | ID=Msa1085780-mRNA-1:cds;Parent=Msa1085780-mRNA-1 |
| chr7_2 | CDS | 86756505 | 86756626 | 86756505 | ID=Msa1085780-mRNA-1:cds;Parent=Msa1085780-mRNA-1 |
| chr7_2 | CDS | 86756773 | 86757731 | 86756773 | ID=Msa1085780-mRNA-1:cds;Parent=Msa1085780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
