Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089140 | AES67850.2 | 90.000 | 270 | 18 | 4 | 15 | 284 | 15 | 275 | 1.44e-162 | 462 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089140 | sp|Q9LRW1|LBD22_ARATH | 57.759 | 116 | 49 | 0 | 18 | 133 | 35 | 150 | 3.09e-41 | 146 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089140 | G7IUH8 | 90.000 | 270 | 18 | 4 | 15 | 284 | 15 | 275 | 6.90e-163 | 462 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1089140 | TF | LOB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089140 | MtrunA17_Chr2g0330201 | 90.000 | 270 | 18 | 4 | 15 | 284 | 15 | 275 | 7.57e-166 | 461 |
| Msa1089140 | MtrunA17_Chr8g0342351 | 69.444 | 108 | 33 | 0 | 16 | 123 | 9 | 116 | 2.27e-50 | 167 |
| Msa1089140 | MtrunA17_Chr4g0059901 | 51.376 | 109 | 53 | 0 | 15 | 123 | 6 | 114 | 3.50e-32 | 119 |
| Msa1089140 | MtrunA17_Chr4g0055441 | 42.000 | 150 | 78 | 3 | 19 | 166 | 2 | 144 | 8.36e-31 | 112 |
| Msa1089140 | MtrunA17_Chr6g0452691 | 40.881 | 159 | 87 | 3 | 16 | 167 | 6 | 164 | 4.77e-30 | 111 |
| Msa1089140 | MtrunA17_Chr6g0452671 | 46.429 | 112 | 60 | 0 | 12 | 123 | 4 | 115 | 1.13e-29 | 111 |
| Msa1089140 | MtrunA17_Chr6g0452661 | 46.923 | 130 | 57 | 4 | 7 | 133 | 2 | 122 | 4.15e-26 | 103 |
| Msa1089140 | MtrunA17_Chr8g0353981 | 29.630 | 243 | 133 | 7 | 20 | 250 | 8 | 224 | 6.25e-26 | 102 |
| Msa1089140 | MtrunA17_Chr4g0040831 | 43.636 | 110 | 61 | 1 | 7 | 116 | 4 | 112 | 1.53e-25 | 100 |
| Msa1089140 | MtrunA17_Chr4g0043421 | 38.462 | 104 | 64 | 0 | 15 | 118 | 11 | 114 | 3.32e-25 | 99.0 |
| Msa1089140 | MtrunA17_Chr3g0114061 | 34.416 | 154 | 95 | 3 | 13 | 163 | 2 | 152 | 4.90e-25 | 97.8 |
| Msa1089140 | MtrunA17_Chr3g0106101 | 40.187 | 107 | 63 | 1 | 13 | 119 | 2 | 107 | 2.10e-24 | 96.7 |
| Msa1089140 | MtrunA17_Chr2g0311601 | 40.816 | 98 | 58 | 0 | 15 | 112 | 9 | 106 | 5.20e-24 | 95.1 |
| Msa1089140 | MtrunA17_Chr6g0449641 | 43.750 | 96 | 54 | 0 | 20 | 115 | 10 | 105 | 1.04e-23 | 94.0 |
| Msa1089140 | MtrunA17_Chr7g0227511 | 42.708 | 96 | 55 | 0 | 20 | 115 | 12 | 107 | 3.58e-23 | 93.6 |
| Msa1089140 | MtrunA17_Chr4g0058651 | 43.011 | 93 | 53 | 0 | 20 | 112 | 12 | 104 | 3.66e-23 | 94.0 |
| Msa1089140 | MtrunA17_Chr3g0117121 | 43.011 | 93 | 53 | 0 | 20 | 112 | 11 | 103 | 4.56e-23 | 93.6 |
| Msa1089140 | MtrunA17_Chr6g0449651 | 42.708 | 96 | 55 | 0 | 20 | 115 | 68 | 163 | 8.13e-23 | 93.2 |
| Msa1089140 | MtrunA17_Chr5g0439111 | 43.077 | 130 | 67 | 3 | 7 | 134 | 2 | 126 | 8.22e-23 | 94.0 |
| Msa1089140 | MtrunA17_Chr5g0437401 | 36.449 | 107 | 68 | 0 | 16 | 122 | 8 | 114 | 7.47e-22 | 90.1 |
| Msa1089140 | MtrunA17_Chr5g0437571 | 35.238 | 105 | 68 | 0 | 15 | 119 | 2 | 106 | 3.89e-21 | 87.8 |
| Msa1089140 | MtrunA17_Chr3g0115431 | 36.538 | 104 | 66 | 0 | 17 | 120 | 7 | 110 | 6.16e-21 | 88.6 |
| Msa1089140 | MtrunA17_Chr5g0438091 | 39.048 | 105 | 62 | 2 | 16 | 119 | 36 | 139 | 1.13e-20 | 87.4 |
| Msa1089140 | MtrunA17_Chr3g0129071 | 40.952 | 105 | 60 | 2 | 16 | 119 | 44 | 147 | 1.39e-20 | 88.2 |
| Msa1089140 | MtrunA17_Chr5g0444351 | 35.135 | 111 | 72 | 0 | 20 | 130 | 6 | 116 | 1.48e-20 | 85.5 |
| Msa1089140 | MtrunA17_Chr4g0030001 | 33.600 | 125 | 77 | 2 | 1 | 119 | 1 | 125 | 1.59e-20 | 86.7 |
| Msa1089140 | MtrunA17_Chr7g0260971 | 36.207 | 116 | 71 | 2 | 8 | 120 | 1 | 116 | 4.11e-20 | 86.3 |
| Msa1089140 | MtrunA17_Chr5g0402611 | 36.634 | 101 | 64 | 0 | 20 | 120 | 9 | 109 | 6.20e-20 | 87.8 |
| Msa1089140 | MtrunA17_Chr1g0184281 | 40.000 | 100 | 59 | 1 | 20 | 118 | 16 | 115 | 1.75e-19 | 84.3 |
| Msa1089140 | MtrunA17_Chr8g0374591 | 33.333 | 105 | 70 | 0 | 16 | 120 | 5 | 109 | 2.20e-19 | 82.0 |
| Msa1089140 | MtrunA17_Chr6g0460951 | 36.634 | 101 | 63 | 1 | 20 | 119 | 41 | 141 | 3.37e-19 | 84.0 |
| Msa1089140 | MtrunA17_Chr7g0225111 | 35.644 | 101 | 65 | 0 | 20 | 120 | 6 | 106 | 6.76e-19 | 80.5 |
| Msa1089140 | MtrunA17_Chr1g0200201 | 40.860 | 93 | 55 | 0 | 20 | 112 | 73 | 165 | 8.22e-19 | 83.2 |
| Msa1089140 | MtrunA17_Chr8g0374601 | 35.922 | 103 | 66 | 0 | 18 | 120 | 25 | 127 | 9.35e-19 | 84.0 |
| Msa1089140 | MtrunA17_Chr3g0113891 | 33.333 | 102 | 68 | 0 | 16 | 117 | 11 | 112 | 3.92e-18 | 80.1 |
| Msa1089140 | MtrunA17_Chr3g0097221 | 34.653 | 101 | 66 | 0 | 20 | 120 | 8 | 108 | 4.26e-18 | 82.4 |
| Msa1089140 | MtrunA17_Chr5g0432451 | 40.000 | 105 | 61 | 2 | 16 | 119 | 40 | 143 | 4.78e-18 | 80.9 |
| Msa1089140 | MtrunA17_Chr8g0351701 | 38.235 | 102 | 62 | 1 | 20 | 120 | 24 | 125 | 6.06e-18 | 80.9 |
| Msa1089140 | MtrunA17_Chr7g0261031 | 36.111 | 108 | 68 | 1 | 14 | 120 | 3 | 110 | 6.12e-18 | 80.5 |
| Msa1089140 | MtrunA17_Chr8g0351721 | 38.235 | 102 | 62 | 1 | 20 | 120 | 19 | 120 | 8.59e-18 | 80.1 |
| Msa1089140 | MtrunA17_Chr1g0184271 | 34.314 | 102 | 66 | 1 | 20 | 120 | 13 | 114 | 8.09e-17 | 77.8 |
| Msa1089140 | MtrunA17_Chr5g0435641 | 30.556 | 108 | 74 | 1 | 14 | 120 | 2 | 109 | 2.71e-16 | 75.5 |
| Msa1089140 | MtrunA17_Chr6g0460941 | 34.091 | 88 | 57 | 1 | 20 | 106 | 8 | 95 | 4.87e-15 | 69.3 |
| Msa1089140 | MtrunA17_Chr7g0245871 | 34.653 | 101 | 65 | 1 | 20 | 119 | 28 | 128 | 1.69e-14 | 71.6 |
| Msa1089140 | MtrunA17_Chr4g0046201 | 34.667 | 75 | 49 | 0 | 19 | 93 | 6 | 80 | 2.68e-13 | 68.6 |
| Msa1089140 | MtrunA17_Chr7g0245861 | 37.500 | 88 | 52 | 2 | 20 | 104 | 13 | 100 | 1.01e-12 | 64.3 |
| Msa1089140 | MtrunA17_Chr8g0374581 | 31.068 | 103 | 70 | 1 | 18 | 119 | 7 | 109 | 7.61e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1089140 | AT3G13850.1 | 57.759 | 116 | 49 | 0 | 18 | 133 | 35 | 150 | 3.14e-42 | 146 |
| Msa1089140 | AT1G72980.1 | 53.175 | 126 | 58 | 1 | 9 | 133 | 3 | 128 | 8.98e-42 | 143 |
| Msa1089140 | AT3G47870.1 | 44.545 | 110 | 61 | 0 | 15 | 124 | 32 | 141 | 3.54e-26 | 105 |
| Msa1089140 | AT5G63090.4 | 37.500 | 112 | 70 | 0 | 9 | 120 | 1 | 112 | 2.05e-23 | 94.7 |
| Msa1089140 | AT5G63090.3 | 37.500 | 112 | 70 | 0 | 9 | 120 | 1 | 112 | 2.05e-23 | 94.7 |
| Msa1089140 | AT5G63090.2 | 37.500 | 112 | 70 | 0 | 9 | 120 | 1 | 112 | 2.05e-23 | 94.7 |
| Msa1089140 | AT5G63090.1 | 37.500 | 112 | 70 | 0 | 9 | 120 | 1 | 112 | 2.05e-23 | 94.7 |
| Msa1089140 | AT3G26660.1 | 36.937 | 111 | 70 | 0 | 20 | 130 | 6 | 116 | 2.33e-23 | 92.8 |
| Msa1089140 | AT3G27650.1 | 40.196 | 102 | 61 | 0 | 14 | 115 | 34 | 135 | 6.53e-23 | 92.8 |
| Msa1089140 | AT3G26620.1 | 36.697 | 109 | 69 | 0 | 20 | 128 | 6 | 114 | 1.08e-22 | 90.9 |
| Msa1089140 | AT2G30130.1 | 37.383 | 107 | 67 | 0 | 13 | 119 | 2 | 108 | 2.73e-22 | 92.0 |
| Msa1089140 | AT1G31320.1 | 38.144 | 97 | 60 | 0 | 10 | 106 | 4 | 100 | 3.10e-22 | 91.3 |
| Msa1089140 | AT2G42430.1 | 38.462 | 117 | 67 | 2 | 9 | 120 | 1 | 117 | 4.07e-22 | 92.8 |
| Msa1089140 | AT1G65620.1 | 38.318 | 107 | 66 | 0 | 14 | 120 | 4 | 110 | 4.00e-21 | 89.0 |
| Msa1089140 | AT1G65620.4 | 38.318 | 107 | 66 | 0 | 14 | 120 | 4 | 110 | 4.00e-21 | 89.0 |
| Msa1089140 | AT1G65620.3 | 38.318 | 107 | 66 | 0 | 14 | 120 | 4 | 110 | 4.00e-21 | 89.0 |
| Msa1089140 | AT1G65620.5 | 38.318 | 107 | 66 | 0 | 14 | 120 | 4 | 110 | 4.00e-21 | 89.0 |
| Msa1089140 | AT1G65620.2 | 38.318 | 107 | 66 | 0 | 14 | 120 | 4 | 110 | 4.00e-21 | 89.0 |
| Msa1089140 | AT2G23660.2 | 33.333 | 105 | 70 | 0 | 16 | 120 | 2 | 106 | 2.10e-20 | 89.4 |
| Msa1089140 | AT2G23660.3 | 33.333 | 105 | 70 | 0 | 16 | 120 | 2 | 106 | 2.10e-20 | 89.4 |
| Msa1089140 | AT2G23660.1 | 33.333 | 105 | 70 | 0 | 16 | 120 | 2 | 106 | 2.10e-20 | 89.4 |
| Msa1089140 | AT1G07900.1 | 39.785 | 93 | 56 | 0 | 20 | 112 | 34 | 126 | 8.19e-20 | 85.1 |
| Msa1089140 | AT1G06280.1 | 37.500 | 96 | 60 | 0 | 18 | 113 | 23 | 118 | 9.01e-20 | 85.5 |
| Msa1089140 | AT2G28500.1 | 37.624 | 101 | 63 | 0 | 20 | 120 | 56 | 156 | 1.42e-19 | 85.5 |
| Msa1089140 | AT3G11090.1 | 29.252 | 147 | 98 | 2 | 16 | 157 | 8 | 153 | 1.98e-19 | 83.6 |
| Msa1089140 | AT3G50510.1 | 34.653 | 101 | 66 | 0 | 20 | 120 | 13 | 113 | 9.59e-19 | 82.4 |
| Msa1089140 | AT3G50510.2 | 34.653 | 101 | 66 | 0 | 20 | 120 | 13 | 113 | 9.59e-19 | 82.4 |
| Msa1089140 | AT5G66870.1 | 31.250 | 112 | 77 | 0 | 16 | 127 | 4 | 115 | 2.74e-18 | 83.6 |
| Msa1089140 | AT3G03760.1 | 36.634 | 101 | 63 | 1 | 20 | 119 | 52 | 152 | 4.30e-18 | 82.4 |
| Msa1089140 | AT3G58190.1 | 37.255 | 102 | 63 | 1 | 20 | 120 | 12 | 113 | 7.41e-18 | 80.5 |
| Msa1089140 | AT1G16530.1 | 37.273 | 110 | 60 | 3 | 11 | 112 | 7 | 115 | 9.99e-18 | 79.0 |
| Msa1089140 | AT2G30340.2 | 36.190 | 105 | 65 | 2 | 16 | 119 | 50 | 153 | 2.82e-17 | 80.1 |
| Msa1089140 | AT2G30340.1 | 36.190 | 105 | 65 | 2 | 16 | 119 | 49 | 152 | 3.36e-17 | 79.7 |
| Msa1089140 | AT4G00220.1 | 38.000 | 100 | 61 | 1 | 22 | 120 | 20 | 119 | 5.93e-17 | 78.6 |
| Msa1089140 | AT2G40470.2 | 31.169 | 154 | 87 | 4 | 16 | 168 | 17 | 152 | 1.05e-16 | 77.0 |
| Msa1089140 | AT2G40470.1 | 31.169 | 154 | 87 | 4 | 16 | 168 | 42 | 177 | 1.44e-16 | 77.4 |
| Msa1089140 | AT2G31310.1 | 33.333 | 108 | 71 | 1 | 14 | 120 | 2 | 109 | 2.19e-16 | 75.9 |
| Msa1089140 | AT2G42440.1 | 32.075 | 106 | 71 | 1 | 14 | 118 | 2 | 107 | 4.84e-16 | 76.3 |
| Msa1089140 | AT2G45420.1 | 35.000 | 100 | 64 | 1 | 22 | 120 | 40 | 139 | 1.47e-15 | 75.1 |
| Msa1089140 | AT4G00210.1 | 32.743 | 113 | 75 | 1 | 9 | 120 | 1 | 113 | 2.41e-15 | 73.9 |
| Msa1089140 | AT2G19820.1 | 37.234 | 94 | 58 | 1 | 20 | 112 | 13 | 106 | 3.60e-15 | 70.9 |
| Msa1089140 | AT5G06080.1 | 32.353 | 102 | 68 | 1 | 19 | 119 | 7 | 108 | 6.95e-15 | 71.6 |
| Msa1089140 | AT5G15060.1 | 37.037 | 81 | 49 | 1 | 12 | 90 | 10 | 90 | 2.74e-13 | 66.2 |
| Msa1089140 | AT2G45410.1 | 35.870 | 92 | 58 | 1 | 22 | 112 | 19 | 110 | 2.72e-12 | 64.7 |
| Msa1089140 | AT5G35900.1 | 24.038 | 104 | 79 | 0 | 17 | 120 | 3 | 106 | 3.43e-12 | 64.7 |
| Msa1089140 | AT1G36000.1 | 30.303 | 99 | 69 | 0 | 15 | 113 | 5 | 103 | 4.78e-12 | 62.4 |
| Msa1089140 | AT2G19510.1 | 28.283 | 99 | 71 | 0 | 15 | 113 | 5 | 103 | 2.09e-11 | 60.5 |
Find 43 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGTAAAGGAACATAATT+AGG | 0.133443 | 7_3:+2452152 | None:intergenic |
| AATCAATGAAATGAATTCTT+TGG | 0.228002 | 7_3:-2451985 | Msa1089140:CDS |
| TGACGATCGTGAGGAAAATA+TGG | 0.301768 | 7_3:+2452665 | None:intergenic |
| AAGAATTCATTTCATTGATT+AGG | 0.332115 | 7_3:+2451988 | None:intergenic |
| TTAAACGCTCATAAATTGTT+TGG | 0.351614 | 7_3:-2452632 | Msa1089140:CDS |
| GACATTGGAGGGTAACAATA+AGG | 0.392243 | 7_3:-2452081 | Msa1089140:CDS |
| GCAACATGTTCATATTCAAT+TGG | 0.430357 | 7_3:+2452240 | None:intergenic |
| CTTGTAAAGGAACATAATTA+GGG | 0.440777 | 7_3:+2452153 | None:intergenic |
| TCAATCTGATATGCGTGCTA+TGG | 0.454015 | 7_3:-2452534 | Msa1089140:CDS |
| CAGCAGAAGTAGTATTGATC+CGG | 0.456820 | 7_3:-2451955 | Msa1089140:CDS |
| GCTCATAAATTGTTTGGTGT+TGG | 0.461210 | 7_3:-2452626 | Msa1089140:CDS |
| TAGTATTGATCCGGGGCACC+AGG | 0.481958 | 7_3:-2451946 | Msa1089140:intron |
| AATCGATAACAACCACCAAC+AGG | 0.487385 | 7_3:+2452509 | None:intergenic |
| AAAATATGGTGCGAGAATGC+AGG | 0.497106 | 7_3:+2452679 | None:intergenic |
| CATAATAATAACGATGATGA+TGG | 0.501827 | 7_3:-2452323 | Msa1089140:CDS |
| AACAACATCATCTCACGAAA+CGG | 0.512962 | 7_3:-2452761 | Msa1089140:CDS |
| AAATAACAAACCTGGTGCCC+CGG | 0.520114 | 7_3:+2451936 | None:intergenic |
| AGCAGAAGTAGTATTGATCC+GGG | 0.521215 | 7_3:-2451954 | Msa1089140:CDS |
| GTATTAAAATCCTCTTGTAA+AGG | 0.525655 | 7_3:+2452140 | None:intergenic |
| GAACGTGTTGGTGATGATCA+AGG | 0.525830 | 7_3:-2452035 | Msa1089140:CDS |
| ACCGCTGTCGCCGTTGACAT+TGG | 0.534962 | 7_3:-2452096 | Msa1089140:CDS |
| TGCAGCAGTTGCAGTTGTTG+AGG | 0.538937 | 7_3:+2452209 | None:intergenic |
| TCATCATTATAATGACATGC+AGG | 0.554364 | 7_3:-2452354 | Msa1089140:CDS |
| ATCAATACTACTTCTGCTGT+TGG | 0.557959 | 7_3:+2451959 | None:intergenic |
| TAATTATGTTCCTTTACAAG+AGG | 0.560978 | 7_3:-2452150 | Msa1089140:CDS |
| TGCAGTTGTTGAGGTTGTTG+AGG | 0.566132 | 7_3:+2452218 | None:intergenic |
| GCTGTCGCCGTTGACATTGG+AGG | 0.566255 | 7_3:-2452093 | Msa1089140:CDS |
| ATCATCTCACGAAACGGCAA+CGG | 0.569818 | 7_3:-2452755 | Msa1089140:CDS |
| TCCAATGTCAACGGCGACAG+CGG | 0.579075 | 7_3:+2452095 | None:intergenic |
| CTGTCGCCGTTGACATTGGA+GGG | 0.585568 | 7_3:-2452092 | Msa1089140:CDS |
| CGTGCTATGGATCCTGTTGG+TGG | 0.590598 | 7_3:-2452521 | Msa1089140:CDS |
| CAATATGTTGTTGATGATGT+CGG | 0.594144 | 7_3:-2452182 | Msa1089140:CDS |
| GTATGATCTCTAAGATGAGG+TGG | 0.598062 | 7_3:+2452575 | None:intergenic |
| TTGTTACCCTCCAATGTCAA+CGG | 0.604424 | 7_3:+2452086 | None:intergenic |
| ATAGTATGATCTCTAAGATG+AGG | 0.624071 | 7_3:+2452572 | None:intergenic |
| TGGAACATTCTTGATCATGT+TGG | 0.626947 | 7_3:+2452595 | None:intergenic |
| AAATATCAACGTAGGAAGTG+TGG | 0.640505 | 7_3:-2452707 | Msa1089140:CDS |
| GAACAAGATCAAGAACGTGT+TGG | 0.646768 | 7_3:-2452047 | Msa1089140:CDS |
| ATGCGTGCTATGGATCCTGT+TGG | 0.652692 | 7_3:-2452524 | Msa1089140:CDS |
| GGTAACAATAAGGAGGAAGA+CGG | 0.654532 | 7_3:-2452071 | Msa1089140:CDS |
| CTGCATGTAAATATCAACGT+AGG | 0.655493 | 7_3:-2452715 | Msa1089140:CDS |
| ATTGGAGGGTAACAATAAGG+AGG | 0.667036 | 7_3:-2452078 | Msa1089140:CDS |
| GCAGAAGTAGTATTGATCCG+GGG | 0.729367 | 7_3:-2451953 | Msa1089140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATTAACAAAACAAAATT+GGG | + | chr7_3:2452069-2452088 | None:intergenic | 15.0% |
| !! | TCAAATTAACAAAACAAAAT+TGG | + | chr7_3:2452070-2452089 | None:intergenic | 15.0% |
| !! | ATATAATTCAGTGTAATTAT+AGG | + | chr7_3:2452194-2452213 | None:intergenic | 15.0% |
| !! | TATAATTACACTGAATTATA+TGG | - | chr7_3:2452193-2452212 | Msa1089140:CDS | 15.0% |
| !!! | AAAAACTTTCTAGTTTTAAA+AGG | + | chr7_3:2452435-2452454 | None:intergenic | 15.0% |
| !!! | TTAAAACTAGAAAGTTTTTA+TGG | - | chr7_3:2452436-2452455 | Msa1089140:CDS | 15.0% |
| !!! | TATTTGCATTTTTAATTGAA+GGG | + | chr7_3:2452710-2452729 | None:intergenic | 15.0% |
| !!! | ATATTTGCATTTTTAATTGA+AGG | + | chr7_3:2452711-2452730 | None:intergenic | 15.0% |
| !! | TCAGAAAATGTTAAAATTAA+TGG | + | chr7_3:2452752-2452771 | None:intergenic | 15.0% |
| !! | CAAATTAACAAAACAAAATT+GGG | + | chr7_3:2452069-2452088 | None:intergenic | 15.0% |
| !! | TCAAATTAACAAAACAAAAT+TGG | + | chr7_3:2452070-2452089 | None:intergenic | 15.0% |
| !! | ATATAATTCAGTGTAATTAT+AGG | + | chr7_3:2452194-2452213 | None:intergenic | 15.0% |
| !! | TATAATTACACTGAATTATA+TGG | - | chr7_3:2452193-2452212 | Msa1089140:CDS | 15.0% |
| !!! | AAAAACTTTCTAGTTTTAAA+AGG | + | chr7_3:2452435-2452454 | None:intergenic | 15.0% |
| !!! | TTAAAACTAGAAAGTTTTTA+TGG | - | chr7_3:2452436-2452455 | Msa1089140:CDS | 15.0% |
| !!! | TATTTGCATTTTTAATTGAA+GGG | + | chr7_3:2452710-2452729 | None:intergenic | 15.0% |
| !!! | ATATTTGCATTTTTAATTGA+AGG | + | chr7_3:2452711-2452730 | None:intergenic | 15.0% |
| !! | TCAGAAAATGTTAAAATTAA+TGG | + | chr7_3:2452752-2452771 | None:intergenic | 15.0% |
| !!! | AAGAATTCATTTCATTGATT+AGG | + | chr7_3:2451951-2451970 | None:intergenic | 20.0% |
| !! | AATCAATGAAATGAATTCTT+TGG | - | chr7_3:2451951-2451970 | Msa1089140:CDS | 20.0% |
| !!! | TGGTTTTATCAAATTATTAG+CGG | - | chr7_3:2452213-2452232 | Msa1089140:CDS | 20.0% |
| !! | TATGATTATGATACTATGTT+TGG | - | chr7_3:2452368-2452387 | Msa1089140:CDS | 20.0% |
| !!! | AAAGGTATAACTTCTATTAA+TGG | + | chr7_3:2452417-2452436 | None:intergenic | 20.0% |
| !! | AATGGAAAAAAAACTATCTT+GGG | + | chr7_3:2452734-2452753 | None:intergenic | 20.0% |
| !! | TAATGGAAAAAAAACTATCT+TGG | + | chr7_3:2452735-2452754 | None:intergenic | 20.0% |
| !!! | AAGAATTCATTTCATTGATT+AGG | + | chr7_3:2451951-2451970 | None:intergenic | 20.0% |
| !! | AATCAATGAAATGAATTCTT+TGG | - | chr7_3:2451951-2451970 | Msa1089140:CDS | 20.0% |
| !!! | TGGTTTTATCAAATTATTAG+CGG | - | chr7_3:2452213-2452232 | Msa1089140:CDS | 20.0% |
| !! | TATGATTATGATACTATGTT+TGG | - | chr7_3:2452368-2452387 | Msa1089140:CDS | 20.0% |
| !!! | AAAGGTATAACTTCTATTAA+TGG | + | chr7_3:2452417-2452436 | None:intergenic | 20.0% |
| !! | AATGGAAAAAAAACTATCTT+GGG | + | chr7_3:2452734-2452753 | None:intergenic | 20.0% |
| !! | TAATGGAAAAAAAACTATCT+TGG | + | chr7_3:2452735-2452754 | None:intergenic | 20.0% |
| ! | TTAAACGCTCATAAATTGTT+TGG | - | chr7_3:2451304-2451323 | Msa1089140:intron | 25.0% |
| ! | CATAATAATAACGATGATGA+TGG | - | chr7_3:2451613-2451632 | Msa1089140:intron | 25.0% |
| ! | CTTGTAAAGGAACATAATTA+GGG | + | chr7_3:2451786-2451805 | None:intergenic | 25.0% |
| ! | TCTTGTAAAGGAACATAATT+AGG | + | chr7_3:2451787-2451806 | None:intergenic | 25.0% |
| ! | TAATTATGTTCCTTTACAAG+AGG | - | chr7_3:2451786-2451805 | Msa1089140:intron | 25.0% |
| ! | GTATTAAAATCCTCTTGTAA+AGG | + | chr7_3:2451799-2451818 | None:intergenic | 25.0% |
| !!! | TACAAGAGGATTTTAATACA+TGG | - | chr7_3:2451800-2451819 | Msa1089140:intron | 25.0% |
| !!! | ACAAGAGGATTTTAATACAT+GGG | - | chr7_3:2451801-2451820 | Msa1089140:intron | 25.0% |
| !! | TTCATTGATTAGGTCAAAAA+CGG | + | chr7_3:2451941-2451960 | None:intergenic | 25.0% |
| ! | TTCAGTGTAATTATAGGTAT+CGG | + | chr7_3:2452188-2452207 | None:intergenic | 25.0% |
| ! | AACAAACTTGTCTTCATAAA+CGG | + | chr7_3:2452259-2452278 | None:intergenic | 25.0% |
| !! | AAACTAGAAAGTTTTTATGG+TGG | - | chr7_3:2452439-2452458 | Msa1089140:CDS | 25.0% |
| !! | CTTTTATGTCATGCAAATAA+TGG | - | chr7_3:2452571-2452590 | Msa1089140:CDS | 25.0% |
| !!! | AATGGTTTTATTTGTGGATA+TGG | + | chr7_3:2452622-2452641 | None:intergenic | 25.0% |
| ! | TTAAACGCTCATAAATTGTT+TGG | - | chr7_3:2451304-2451323 | Msa1089140:intron | 25.0% |
| ! | CATAATAATAACGATGATGA+TGG | - | chr7_3:2451613-2451632 | Msa1089140:intron | 25.0% |
| ! | CTTGTAAAGGAACATAATTA+GGG | + | chr7_3:2451786-2451805 | None:intergenic | 25.0% |
| ! | TCTTGTAAAGGAACATAATT+AGG | + | chr7_3:2451787-2451806 | None:intergenic | 25.0% |
| ! | TAATTATGTTCCTTTACAAG+AGG | - | chr7_3:2451786-2451805 | Msa1089140:intron | 25.0% |
| ! | GTATTAAAATCCTCTTGTAA+AGG | + | chr7_3:2451799-2451818 | None:intergenic | 25.0% |
| !!! | TACAAGAGGATTTTAATACA+TGG | - | chr7_3:2451800-2451819 | Msa1089140:intron | 25.0% |
| !!! | ACAAGAGGATTTTAATACAT+GGG | - | chr7_3:2451801-2451820 | Msa1089140:intron | 25.0% |
| !! | TTCATTGATTAGGTCAAAAA+CGG | + | chr7_3:2451941-2451960 | None:intergenic | 25.0% |
| ! | TTCAGTGTAATTATAGGTAT+CGG | + | chr7_3:2452188-2452207 | None:intergenic | 25.0% |
| ! | AACAAACTTGTCTTCATAAA+CGG | + | chr7_3:2452259-2452278 | None:intergenic | 25.0% |
| !! | AAACTAGAAAGTTTTTATGG+TGG | - | chr7_3:2452439-2452458 | Msa1089140:CDS | 25.0% |
| !! | CTTTTATGTCATGCAAATAA+TGG | - | chr7_3:2452571-2452590 | Msa1089140:CDS | 25.0% |
| !!! | AATGGTTTTATTTGTGGATA+TGG | + | chr7_3:2452622-2452641 | None:intergenic | 25.0% |
| !! | ATAGTATGATCTCTAAGATG+AGG | + | chr7_3:2451367-2451386 | None:intergenic | 30.0% |
| TCATCATTATAATGACATGC+AGG | - | chr7_3:2451582-2451601 | Msa1089140:intron | 30.0% | |
| GCAACATGTTCATATTCAAT+TGG | + | chr7_3:2451699-2451718 | None:intergenic | 30.0% | |
| !! | CAATATGTTGTTGATGATGT+CGG | - | chr7_3:2451754-2451773 | Msa1089140:intron | 30.0% |
| ! | TCATTGATTAGGTCAAAAAC+GGG | + | chr7_3:2451940-2451959 | None:intergenic | 30.0% |
| TCACAACTAAATAACAAACC+TGG | + | chr7_3:2452011-2452030 | None:intergenic | 30.0% | |
| TATCAAATTATTAGCGGTGT+CGG | - | chr7_3:2452219-2452238 | Msa1089140:CDS | 30.0% | |
| !!! | TAGGGTTTCTTGAGATTTTT+TGG | - | chr7_3:2452321-2452340 | Msa1089140:CDS | 30.0% |
| ! | AATACTCTCTTTTTCTTCCA+AGG | + | chr7_3:2452490-2452509 | None:intergenic | 30.0% |
| !!! | GTTGTGAATGGTTTTATTTG+TGG | + | chr7_3:2452628-2452647 | None:intergenic | 30.0% |
| !! | GTTAAATCTGTGTTTTTGAG+GGG | + | chr7_3:2452684-2452703 | None:intergenic | 30.0% |
| !! | GGTTAAATCTGTGTTTTTGA+GGG | + | chr7_3:2452685-2452704 | None:intergenic | 30.0% |
| !! | TGGTTAAATCTGTGTTTTTG+AGG | + | chr7_3:2452686-2452705 | None:intergenic | 30.0% |
| !! | TGCATTTTTAATTGAAGGGT+TGG | + | chr7_3:2452706-2452725 | None:intergenic | 30.0% |
| !! | ATAGTATGATCTCTAAGATG+AGG | + | chr7_3:2451367-2451386 | None:intergenic | 30.0% |
| TCATCATTATAATGACATGC+AGG | - | chr7_3:2451582-2451601 | Msa1089140:intron | 30.0% | |
| GCAACATGTTCATATTCAAT+TGG | + | chr7_3:2451699-2451718 | None:intergenic | 30.0% | |
| !! | CAATATGTTGTTGATGATGT+CGG | - | chr7_3:2451754-2451773 | Msa1089140:intron | 30.0% |
| ! | TCATTGATTAGGTCAAAAAC+GGG | + | chr7_3:2451940-2451959 | None:intergenic | 30.0% |
| TCACAACTAAATAACAAACC+TGG | + | chr7_3:2452011-2452030 | None:intergenic | 30.0% | |
| TATCAAATTATTAGCGGTGT+CGG | - | chr7_3:2452219-2452238 | Msa1089140:CDS | 30.0% | |
| !!! | TAGGGTTTCTTGAGATTTTT+TGG | - | chr7_3:2452321-2452340 | Msa1089140:CDS | 30.0% |
| ! | AATACTCTCTTTTTCTTCCA+AGG | + | chr7_3:2452490-2452509 | None:intergenic | 30.0% |
| !!! | GTTGTGAATGGTTTTATTTG+TGG | + | chr7_3:2452628-2452647 | None:intergenic | 30.0% |
| !! | GTTAAATCTGTGTTTTTGAG+GGG | + | chr7_3:2452684-2452703 | None:intergenic | 30.0% |
| !! | GGTTAAATCTGTGTTTTTGA+GGG | + | chr7_3:2452685-2452704 | None:intergenic | 30.0% |
| !! | TGGTTAAATCTGTGTTTTTG+AGG | + | chr7_3:2452686-2452705 | None:intergenic | 30.0% |
| !! | TGCATTTTTAATTGAAGGGT+TGG | + | chr7_3:2452706-2452725 | None:intergenic | 30.0% |
| AACAACATCATCTCACGAAA+CGG | - | chr7_3:2451175-2451194 | Msa1089140:intron | 35.0% | |
| CTGCATGTAAATATCAACGT+AGG | - | chr7_3:2451221-2451240 | Msa1089140:intron | 35.0% | |
| AAATATCAACGTAGGAAGTG+TGG | - | chr7_3:2451229-2451248 | Msa1089140:intron | 35.0% | |
| !!! | AATTGTTTTTGACGATCGTG+AGG | + | chr7_3:2451283-2451302 | None:intergenic | 35.0% |
| !! | GCTCATAAATTGTTTGGTGT+TGG | - | chr7_3:2451310-2451329 | Msa1089140:intron | 35.0% |
| TGGAACATTCTTGATCATGT+TGG | + | chr7_3:2451344-2451363 | None:intergenic | 35.0% | |
| ATCAATACTACTTCTGCTGT+TGG | + | chr7_3:2451980-2451999 | None:intergenic | 35.0% | |
| !! | GTAATTATAGGTATCGGTGT+TGG | + | chr7_3:2452182-2452201 | None:intergenic | 35.0% |
| !! | AGCTTGCTTCGTTTTAATCT+AGG | - | chr7_3:2452302-2452321 | Msa1089140:CDS | 35.0% |
| !! | GCTTGCTTCGTTTTAATCTA+GGG | - | chr7_3:2452303-2452322 | Msa1089140:CDS | 35.0% |
| CCTAAAACTAGAGTTGTGAA+TGG | + | chr7_3:2452640-2452659 | None:intergenic | 35.0% | |
| !!! | CCATTCACAACTCTAGTTTT+AGG | - | chr7_3:2452637-2452656 | Msa1089140:CDS | 35.0% |
| AACAACATCATCTCACGAAA+CGG | - | chr7_3:2451175-2451194 | Msa1089140:intron | 35.0% | |
| CTGCATGTAAATATCAACGT+AGG | - | chr7_3:2451221-2451240 | Msa1089140:intron | 35.0% | |
| AAATATCAACGTAGGAAGTG+TGG | - | chr7_3:2451229-2451248 | Msa1089140:intron | 35.0% | |
| !!! | AATTGTTTTTGACGATCGTG+AGG | + | chr7_3:2451283-2451302 | None:intergenic | 35.0% |
| !! | GCTCATAAATTGTTTGGTGT+TGG | - | chr7_3:2451310-2451329 | Msa1089140:intron | 35.0% |
| TGGAACATTCTTGATCATGT+TGG | + | chr7_3:2451344-2451363 | None:intergenic | 35.0% | |
| ATCAATACTACTTCTGCTGT+TGG | + | chr7_3:2451980-2451999 | None:intergenic | 35.0% | |
| !! | GTAATTATAGGTATCGGTGT+TGG | + | chr7_3:2452182-2452201 | None:intergenic | 35.0% |
| !! | AGCTTGCTTCGTTTTAATCT+AGG | - | chr7_3:2452302-2452321 | Msa1089140:CDS | 35.0% |
| !! | GCTTGCTTCGTTTTAATCTA+GGG | - | chr7_3:2452303-2452322 | Msa1089140:CDS | 35.0% |
| CCTAAAACTAGAGTTGTGAA+TGG | + | chr7_3:2452640-2452659 | None:intergenic | 35.0% | |
| !!! | CCATTCACAACTCTAGTTTT+AGG | - | chr7_3:2452637-2452656 | Msa1089140:CDS | 35.0% |
| AAAATATGGTGCGAGAATGC+AGG | + | chr7_3:2451260-2451279 | None:intergenic | 40.0% | |
| TGACGATCGTGAGGAAAATA+TGG | + | chr7_3:2451274-2451293 | None:intergenic | 40.0% | |
| !! | GTATGATCTCTAAGATGAGG+TGG | + | chr7_3:2451364-2451383 | None:intergenic | 40.0% |
| TCAATCTGATATGCGTGCTA+TGG | - | chr7_3:2451402-2451421 | Msa1089140:intron | 40.0% | |
| AATCGATAACAACCACCAAC+AGG | + | chr7_3:2451430-2451449 | None:intergenic | 40.0% | |
| TTGTTACCCTCCAATGTCAA+CGG | + | chr7_3:2451853-2451872 | None:intergenic | 40.0% | |
| GACATTGGAGGGTAACAATA+AGG | - | chr7_3:2451855-2451874 | Msa1089140:intron | 40.0% | |
| ATTGGAGGGTAACAATAAGG+AGG | - | chr7_3:2451858-2451877 | Msa1089140:intron | 40.0% | |
| GGTAACAATAAGGAGGAAGA+CGG | - | chr7_3:2451865-2451884 | Msa1089140:intron | 40.0% | |
| GAACAAGATCAAGAACGTGT+TGG | - | chr7_3:2451889-2451908 | Msa1089140:intron | 40.0% | |
| !! | CAGCAGAAGTAGTATTGATC+CGG | - | chr7_3:2451981-2452000 | Msa1089140:CDS | 40.0% |
| !! | AGCAGAAGTAGTATTGATCC+GGG | - | chr7_3:2451982-2452001 | Msa1089140:CDS | 40.0% |
| CACTTTGATCCTACCAAGTA+CGG | - | chr7_3:2452110-2452129 | Msa1089140:CDS | 40.0% | |
| TACGGACATTCTTCCGATTA+GGG | - | chr7_3:2452128-2452147 | Msa1089140:CDS | 40.0% | |
| ! | TTTTCTTCCAAGGTGTGAGA+TGG | + | chr7_3:2452480-2452499 | None:intergenic | 40.0% |
| AAAATATGGTGCGAGAATGC+AGG | + | chr7_3:2451260-2451279 | None:intergenic | 40.0% | |
| TGACGATCGTGAGGAAAATA+TGG | + | chr7_3:2451274-2451293 | None:intergenic | 40.0% | |
| !! | GTATGATCTCTAAGATGAGG+TGG | + | chr7_3:2451364-2451383 | None:intergenic | 40.0% |
| TCAATCTGATATGCGTGCTA+TGG | - | chr7_3:2451402-2451421 | Msa1089140:intron | 40.0% | |
| AATCGATAACAACCACCAAC+AGG | + | chr7_3:2451430-2451449 | None:intergenic | 40.0% | |
| TTGTTACCCTCCAATGTCAA+CGG | + | chr7_3:2451853-2451872 | None:intergenic | 40.0% | |
| GACATTGGAGGGTAACAATA+AGG | - | chr7_3:2451855-2451874 | Msa1089140:intron | 40.0% | |
| ATTGGAGGGTAACAATAAGG+AGG | - | chr7_3:2451858-2451877 | Msa1089140:intron | 40.0% | |
| GGTAACAATAAGGAGGAAGA+CGG | - | chr7_3:2451865-2451884 | Msa1089140:intron | 40.0% | |
| GAACAAGATCAAGAACGTGT+TGG | - | chr7_3:2451889-2451908 | Msa1089140:intron | 40.0% | |
| !! | CAGCAGAAGTAGTATTGATC+CGG | - | chr7_3:2451981-2452000 | Msa1089140:CDS | 40.0% |
| !! | AGCAGAAGTAGTATTGATCC+GGG | - | chr7_3:2451982-2452001 | Msa1089140:CDS | 40.0% |
| CACTTTGATCCTACCAAGTA+CGG | - | chr7_3:2452110-2452129 | Msa1089140:CDS | 40.0% | |
| TACGGACATTCTTCCGATTA+GGG | - | chr7_3:2452128-2452147 | Msa1089140:CDS | 40.0% | |
| ! | TTTTCTTCCAAGGTGTGAGA+TGG | + | chr7_3:2452480-2452499 | None:intergenic | 40.0% |
| ATCATCTCACGAAACGGCAA+CGG | - | chr7_3:2451181-2451200 | Msa1089140:intron | 45.0% | |
| TGCAGTTGTTGAGGTTGTTG+AGG | + | chr7_3:2451721-2451740 | None:intergenic | 45.0% | |
| !! | GAACGTGTTGGTGATGATCA+AGG | - | chr7_3:2451901-2451920 | Msa1089140:intron | 45.0% |
| !! | GCAGAAGTAGTATTGATCCG+GGG | - | chr7_3:2451983-2452002 | Msa1089140:CDS | 45.0% |
| AAATAACAAACCTGGTGCCC+CGG | + | chr7_3:2452003-2452022 | None:intergenic | 45.0% | |
| GAAGAATGTCCGTACTTGGT+AGG | + | chr7_3:2452122-2452141 | None:intergenic | 45.0% | |
| ATCGGAAGAATGTCCGTACT+TGG | + | chr7_3:2452126-2452145 | None:intergenic | 45.0% | |
| GTACGGACATTCTTCCGATT+AGG | - | chr7_3:2452127-2452146 | Msa1089140:CDS | 45.0% | |
| !! | TTTTGAGGGGATACTAGCAG+AGG | + | chr7_3:2452671-2452690 | None:intergenic | 45.0% |
| ATCATCTCACGAAACGGCAA+CGG | - | chr7_3:2451181-2451200 | Msa1089140:intron | 45.0% | |
| TGCAGTTGTTGAGGTTGTTG+AGG | + | chr7_3:2451721-2451740 | None:intergenic | 45.0% | |
| !! | GAACGTGTTGGTGATGATCA+AGG | - | chr7_3:2451901-2451920 | Msa1089140:intron | 45.0% |
| !! | GCAGAAGTAGTATTGATCCG+GGG | - | chr7_3:2451983-2452002 | Msa1089140:CDS | 45.0% |
| AAATAACAAACCTGGTGCCC+CGG | + | chr7_3:2452003-2452022 | None:intergenic | 45.0% | |
| GAAGAATGTCCGTACTTGGT+AGG | + | chr7_3:2452122-2452141 | None:intergenic | 45.0% | |
| ATCGGAAGAATGTCCGTACT+TGG | + | chr7_3:2452126-2452145 | None:intergenic | 45.0% | |
| GTACGGACATTCTTCCGATT+AGG | - | chr7_3:2452127-2452146 | Msa1089140:CDS | 45.0% | |
| !! | TTTTGAGGGGATACTAGCAG+AGG | + | chr7_3:2452671-2452690 | None:intergenic | 45.0% |
| ATGCGTGCTATGGATCCTGT+TGG | - | chr7_3:2451412-2451431 | Msa1089140:intron | 50.0% | |
| TGCAGCAGTTGCAGTTGTTG+AGG | + | chr7_3:2451730-2451749 | None:intergenic | 50.0% | |
| ! | TTCTTCCGATTAGGGTGTCC+TGG | - | chr7_3:2452136-2452155 | Msa1089140:CDS | 50.0% |
| ! | TCTTCCGATTAGGGTGTCCT+GGG | - | chr7_3:2452137-2452156 | Msa1089140:CDS | 50.0% |
| AGCAGATCCATCTCACACCT+TGG | - | chr7_3:2452470-2452489 | Msa1089140:CDS | 50.0% | |
| ATGCGTGCTATGGATCCTGT+TGG | - | chr7_3:2451412-2451431 | Msa1089140:intron | 50.0% | |
| TGCAGCAGTTGCAGTTGTTG+AGG | + | chr7_3:2451730-2451749 | None:intergenic | 50.0% | |
| ! | TTCTTCCGATTAGGGTGTCC+TGG | - | chr7_3:2452136-2452155 | Msa1089140:CDS | 50.0% |
| ! | TCTTCCGATTAGGGTGTCCT+GGG | - | chr7_3:2452137-2452156 | Msa1089140:CDS | 50.0% |
| AGCAGATCCATCTCACACCT+TGG | - | chr7_3:2452470-2452489 | Msa1089140:CDS | 50.0% | |
| CGTGCTATGGATCCTGTTGG+TGG | - | chr7_3:2451415-2451434 | Msa1089140:intron | 55.0% | |
| TCCAATGTCAACGGCGACAG+CGG | + | chr7_3:2451844-2451863 | None:intergenic | 55.0% | |
| CTGTCGCCGTTGACATTGGA+GGG | - | chr7_3:2451844-2451863 | Msa1089140:intron | 55.0% | |
| !! | TAGTATTGATCCGGGGCACC+AGG | - | chr7_3:2451990-2452009 | Msa1089140:CDS | 55.0% |
| GACACCCAGGACACCCTAAT+CGG | + | chr7_3:2452144-2452163 | None:intergenic | 55.0% | |
| !! | GTATCGGTGTTGGACACGAC+AGG | + | chr7_3:2452172-2452191 | None:intergenic | 55.0% |
| ! | TAGCGGTGTCGGATGTGTGT+CGG | - | chr7_3:2452230-2452249 | Msa1089140:CDS | 55.0% |
| CGTGCTATGGATCCTGTTGG+TGG | - | chr7_3:2451415-2451434 | Msa1089140:intron | 55.0% | |
| TCCAATGTCAACGGCGACAG+CGG | + | chr7_3:2451844-2451863 | None:intergenic | 55.0% | |
| CTGTCGCCGTTGACATTGGA+GGG | - | chr7_3:2451844-2451863 | Msa1089140:intron | 55.0% | |
| !! | TAGTATTGATCCGGGGCACC+AGG | - | chr7_3:2451990-2452009 | Msa1089140:CDS | 55.0% |
| GACACCCAGGACACCCTAAT+CGG | + | chr7_3:2452144-2452163 | None:intergenic | 55.0% | |
| !! | GTATCGGTGTTGGACACGAC+AGG | + | chr7_3:2452172-2452191 | None:intergenic | 55.0% |
| ! | TAGCGGTGTCGGATGTGTGT+CGG | - | chr7_3:2452230-2452249 | Msa1089140:CDS | 55.0% |
| ACCGCTGTCGCCGTTGACAT+TGG | - | chr7_3:2451840-2451859 | Msa1089140:intron | 60.0% | |
| GCTGTCGCCGTTGACATTGG+AGG | - | chr7_3:2451843-2451862 | Msa1089140:intron | 60.0% | |
| ACGACAGGTGTCAGACACCC+AGG | + | chr7_3:2452157-2452176 | None:intergenic | 60.0% | |
| ACCGCTGTCGCCGTTGACAT+TGG | - | chr7_3:2451840-2451859 | Msa1089140:intron | 60.0% | |
| GCTGTCGCCGTTGACATTGG+AGG | - | chr7_3:2451843-2451862 | Msa1089140:intron | 60.0% | |
| ACGACAGGTGTCAGACACCC+AGG | + | chr7_3:2452157-2452176 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 2451160 | 2452798 | 2451160 | ID=Msa1089140;Name=Msa1089140 |
| chr7_3 | mRNA | 2451160 | 2452798 | 2451160 | ID=Msa1089140-mRNA-1;Parent=Msa1089140;Name=Msa1089140-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0|0|0.5|1|1|2|0|284 |
| chr7_3 | exon | 2451947 | 2452798 | 2451947 | ID=Msa1089140-mRNA-1:exon:1007;Parent=Msa1089140-mRNA-1 |
| chr7_3 | exon | 2451160 | 2451162 | 2451160 | ID=Msa1089140-mRNA-1:exon:1006;Parent=Msa1089140-mRNA-1 |
| chr7_3 | CDS | 2451947 | 2452798 | 2451947 | ID=Msa1089140-mRNA-1:cds;Parent=Msa1089140-mRNA-1 |
| chr7_3 | CDS | 2451160 | 2451162 | 2451160 | ID=Msa1089140-mRNA-1:cds;Parent=Msa1089140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
