AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1091740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1091740 MtrunA17_Chr7g0215681 89.209 139 15 0 1 139 650 788 2.98e-82 256
Msa1091740 MtrunA17_Chr7g0215651 87.770 139 17 0 1 139 603 741 1.82e-80 251
Msa1091740 MtrunA17_Chr7g0215061 87.050 139 18 0 1 139 691 829 2.52e-80 252
Msa1091740 MtrunA17_Chr7g0215631 86.232 138 19 0 1 138 612 749 1.22e-77 244
Msa1091740 MtrunA17_Chr7g0215641 82.609 138 24 0 1 138 637 774 4.28e-72 229
Msa1091740 MtrunA17_Chr7g0215671 85.612 139 20 0 1 139 619 757 1.50e-70 225
Msa1091740 MtrunA17_Chr7g0215011 83.453 139 23 0 1 139 650 788 2.45e-67 217
Msa1091740 MtrunA17_Chr8g0357171 86.331 139 19 0 1 139 815 953 2.55e-67 219
Msa1091740 MtrunA17_Chr7g0217061 78.261 138 30 0 1 138 653 790 1.37e-66 215
Msa1091740 MtrunA17_Chr8g0357191 85.612 139 20 0 1 139 859 997 1.78e-66 217
Msa1091740 MtrunA17_Chr8g0357151 84.173 139 22 0 1 139 943 1081 5.78e-64 210
Msa1091740 MtrunA17_Chr7g0217081 74.820 139 35 0 1 139 730 868 1.21e-63 208
Msa1091740 MtrunA17_Chr7g0218991 75.540 139 34 0 1 139 626 764 1.92e-63 206
Msa1091740 MtrunA17_Chr7g0218871 66.912 136 45 0 1 136 89 224 9.12e-58 179
Msa1091740 MtrunA17_Chr1g0165181 52.885 104 43 3 4 102 179 281 2.40e-30 110
Msa1091740 MtrunA17_Chr1g0165191 55.769 104 40 3 4 102 1043 1145 1.17e-29 112
Msa1091740 MtrunA17_Chr5g0439291 48.438 128 61 2 3 126 906 1032 3.65e-29 111
Msa1091740 MtrunA17_Chr7g0250431 51.304 115 51 2 3 113 78 191 8.31e-29 104
Msa1091740 MtrunA17_Chr8g0355401 48.077 104 48 2 4 102 50 152 9.33e-29 103
Msa1091740 MtrunA17_Chr7g0217041 44.094 127 71 0 1 127 687 813 1.89e-28 108
Msa1091740 MtrunA17_Chr4g0019041 49.541 109 54 1 3 111 839 946 2.69e-28 108
Msa1091740 MtrunA17_Chr4g0019371 50.467 107 52 1 3 109 834 939 8.03e-28 107
Msa1091740 MtrunA17_Chr1g0165211 48.673 113 49 2 3 107 1061 1172 1.52e-27 106
Msa1091740 MtrunA17_Chr1g0165221 52.212 113 45 2 3 107 1018 1129 1.62e-27 106
Msa1091740 MtrunA17_Chr1g0165951 49.558 113 48 2 3 107 891 1002 1.86e-27 106
Msa1091740 MtrunA17_Chr1g0165141 53.846 104 42 3 4 102 1020 1122 2.17e-27 106
Msa1091740 MtrunA17_Chr1g0165261 49.558 113 48 2 3 107 483 594 4.83e-27 104
Msa1091740 MtrunA17_Chr7g0250401 49.219 128 59 3 3 125 473 599 7.32e-27 104
Msa1091740 MtrunA17_Chr1g0165231 49.558 113 48 2 3 107 1044 1155 2.06e-26 103
Msa1091740 MtrunA17_Chr1g0165301 49.558 113 48 2 3 107 1044 1155 2.06e-26 103
Msa1091740 MtrunA17_Chr1g0165891 47.788 113 50 2 3 107 561 672 2.85e-26 102
Msa1091740 MtrunA17_Chr1g0165971 49.558 113 48 2 3 107 946 1057 2.87e-26 102
Msa1091740 MtrunA17_Chr7g0250491 52.294 109 47 2 3 107 950 1057 6.74e-26 101
Msa1091740 MtrunA17_Chr7g0232451 52.252 111 47 3 3 108 892 1001 2.02e-25 100
Msa1091740 MtrunA17_Chr7g0250351 46.565 131 64 3 3 128 727 856 2.67e-25 100
Msa1091740 MtrunA17_Chr1g0165901 48.673 113 49 2 3 107 1129 1240 3.34e-25 99.8
Msa1091740 MtrunA17_Chr7g0232131 51.887 106 48 3 3 106 1076 1180 4.00e-25 99.8
Msa1091740 MtrunA17_Chr7g0250471 45.312 128 65 2 3 126 933 1059 5.30e-25 99.4
Msa1091740 MtrunA17_Chr7g0232171 50.000 104 50 2 3 106 981 1082 6.03e-25 99.0
Msa1091740 MtrunA17_Chr7g0231541 51.887 106 48 3 3 106 609 713 7.42e-25 99.0
Msa1091740 MtrunA17_Chr7g0250381 46.457 127 63 2 3 125 935 1060 7.51e-25 99.0
Msa1091740 MtrunA17_Chr7g0232631 51.351 111 48 3 3 108 884 993 1.40e-24 98.2
Msa1091740 MtrunA17_Chr7g0261331 42.969 128 68 3 2 125 1093 1219 3.61e-24 97.1
Msa1091740 MtrunA17_Chr7g0232211 47.170 106 53 2 3 106 969 1073 1.47e-23 95.1
Msa1091740 MtrunA17_Chr7g0233841 48.182 110 48 3 3 104 202 310 1.24e-22 90.9
Msa1091740 MtrunA17_Chr1g0165281 45.872 109 53 2 4 107 811 918 1.79e-22 92.0
Msa1091740 MtrunA17_Chr1g0165241 45.872 109 53 2 4 107 811 918 1.79e-22 92.0
Msa1091740 MtrunA17_Chr1g0165311 45.872 109 53 2 4 107 811 918 1.79e-22 92.0
Msa1091740 MtrunA17_Chr7g0232611 45.833 96 46 2 3 93 86 180 4.21e-21 84.0
Msa1091740 MtrunA17_Chr1g0165981 46.875 96 43 1 20 107 479 574 1.01e-20 87.0
Msa1091740 MtrunA17_Chr7g0233881 44.954 109 50 2 3 102 834 941 2.60e-20 85.9
Msa1091740 MtrunA17_Chr7g0217101 80.435 46 9 0 1 46 485 530 3.11e-18 79.7
Msa1091740 MtrunA17_Chr1g0189871 40.000 110 56 3 2 102 964 1072 4.41e-18 79.3
Msa1091740 MtrunA17_Chr2g0312651 39.815 108 57 2 2 102 972 1078 2.33e-17 77.4
Msa1091740 MtrunA17_Chr4g0054521 38.168 131 65 4 2 124 852 974 7.67e-17 75.9
Msa1091740 MtrunA17_Chr5g0400681 39.316 117 58 4 2 110 855 966 4.47e-16 73.6
Msa1091740 MtrunA17_Chr3g0095081 40.909 110 52 3 2 102 890 995 4.64e-16 73.6
Msa1091740 MtrunA17_Chr1g0169841 39.091 110 57 3 2 102 974 1082 5.06e-16 73.6
Msa1091740 MtrunA17_Chr3g0140871 37.719 114 59 2 1 106 850 959 1.32e-15 72.4
Msa1091740 MtrunA17_Chr7g0216271 76.190 42 10 0 17 58 1 42 2.08e-15 65.9
Msa1091740 MtrunA17_Chr1g0201241 37.500 112 57 3 2 102 885 994 6.33e-15 70.5
Msa1091740 MtrunA17_Chr6g0487061 41.121 107 54 3 2 102 869 972 8.70e-15 70.1
Msa1091740 MtrunA17_Chr5g0442151 38.182 110 56 3 2 102 846 952 1.20e-14 69.7
Msa1091740 MtrunA17_Chr4g0046511 38.532 109 55 3 1 102 859 962 1.22e-14 69.7
Msa1091740 MtrunA17_Chr2g0277081 36.036 111 59 2 2 104 850 956 1.66e-14 69.3
Msa1091740 MtrunA17_Chr4g0064201 36.364 121 61 3 2 113 280 393 2.79e-14 68.6
Msa1091740 MtrunA17_Chr3g0125491 40.000 110 54 3 1 102 217 322 4.76e-14 67.4
Msa1091740 MtrunA17_Chr5g0419721 40.385 104 58 3 2 102 811 913 9.09e-14 67.0
Msa1091740 MtrunA17_Chr1g0204461 37.607 117 62 3 2 112 836 947 1.02e-13 67.0
Msa1091740 MtrunA17_Chr4g0018701 35.455 110 62 2 1 102 883 991 1.13e-13 67.0
Msa1091740 MtrunA17_Chr4g0017251 37.168 113 60 2 3 107 839 948 1.14e-13 66.6
Msa1091740 MtrunA17_Chr2g0333181 37.615 109 57 2 2 102 202 307 1.40e-13 66.2
Msa1091740 MtrunA17_Chr7g0262141 37.273 110 59 2 1 102 875 982 1.98e-13 66.2
Msa1091740 MtrunA17_Chr4g0035464 35.965 114 56 3 2 102 847 956 2.05e-13 66.2
Msa1091740 MtrunA17_Chr2g0282831 36.364 121 64 4 1 114 831 945 3.98e-13 65.1
Msa1091740 MtrunA17_Chr2g0280191 36.607 112 59 2 1 104 853 960 4.06e-13 65.1
Msa1091740 MtrunA17_Chr2g0324931 36.697 109 57 2 1 102 856 959 4.52e-13 65.1
Msa1091740 MtrunA17_Chr5g0400701 33.871 124 57 3 2 102 870 991 7.70e-13 64.3
Msa1091740 MtrunA17_Chr3g0126181 35.135 111 62 2 1 102 928 1037 7.83e-13 64.3
Msa1091740 MtrunA17_Chr7g0258431 33.600 125 70 2 2 113 6 130 8.24e-13 63.2
Msa1091740 MtrunA17_Chr2g0293071 38.053 113 53 5 1 102 219 325 1.48e-12 63.5
Msa1091740 MtrunA17_Chr5g0409041 35.897 117 70 3 1 112 464 580 1.88e-12 63.2
Msa1091740 MtrunA17_Chr3g0140861 35.294 119 59 3 1 107 823 935 1.98e-12 63.2
Msa1091740 MtrunA17_Chr7g0237821 39.623 106 57 4 2 102 963 1066 2.06e-12 63.2
Msa1091740 MtrunA17_Chr2g0334191 33.333 114 67 2 2 106 955 1068 2.31e-12 63.2
Msa1091740 MtrunA17_Chr8g0380441 29.134 127 78 2 2 119 240 363 2.47e-12 62.8
Msa1091740 MtrunA17_Chr1g0197051 35.714 112 58 4 4 102 973 1083 3.60e-12 62.4
Msa1091740 MtrunA17_Chr3g0102451 33.071 127 67 4 1 116 487 606 4.97e-12 62.0
Msa1091740 MtrunA17_Chr2g0293081 37.273 110 58 3 1 102 556 662 5.29e-12 62.0
Msa1091740 MtrunA17_Chr8g0379931 37.615 109 57 2 2 102 869 974 5.33e-12 62.0
Msa1091740 MtrunA17_Chr3g0125451 37.273 110 57 3 1 102 581 686 5.63e-12 62.0
Msa1091740 MtrunA17_Chr5g0446651 32.283 127 68 4 1 116 520 639 5.78e-12 62.0
Msa1091740 MtrunA17_Chr3g0125441 37.273 110 57 3 1 102 616 721 6.61e-12 61.6
Msa1091740 MtrunA17_Chr7g0245571 35.537 121 62 3 2 113 258 371 7.00e-12 61.6
Msa1091740 MtrunA17_Chr2g0315061 31.469 143 86 4 2 135 199 338 7.14e-12 61.6
Msa1091740 MtrunA17_Chr2g0314861 36.697 109 58 3 2 102 82 187 9.41e-12 60.5
Msa1091740 MtrunA17_Chr5g0440231 34.211 114 62 2 2 102 827 940 9.90e-12 61.2
Msa1091740 MtrunA17_Chr8g0358781 35.780 109 58 3 2 102 504 608 1.12e-11 61.2
Msa1091740 MtrunA17_Chr1g0170201 29.661 118 73 3 2 113 515 628 1.24e-11 60.8
Msa1091740 MtrunA17_Chr5g0440211 35.345 116 58 3 2 102 862 975 1.28e-11 60.8
Msa1091740 MtrunA17_Chr3g0125461 35.455 110 59 2 1 102 604 709 1.37e-11 60.8
Msa1091740 MtrunA17_Chr8g0388941 35.455 110 59 3 2 102 238 344 1.38e-11 60.5
Msa1091740 MtrunA17_Chr2g0314841 36.697 109 58 3 2 102 823 928 1.44e-11 60.8
Msa1091740 MtrunA17_Chr2g0314821 36.697 109 58 3 2 102 826 931 1.47e-11 60.8
Msa1091740 MtrunA17_Chr5g0435211 33.636 110 61 2 2 102 247 353 1.65e-11 60.5
Msa1091740 MtrunA17_Chr6g0474661 31.496 127 69 3 4 117 545 666 1.67e-11 60.5
Msa1091740 MtrunA17_Chr2g0333691 32.374 139 81 3 2 131 281 415 1.83e-11 60.5
Msa1091740 MtrunA17_Chr1g0190411 35.455 110 61 3 1 102 872 979 1.85e-11 60.5
Msa1091740 MtrunA17_Chr2g0314881 35.780 109 59 3 2 102 391 496 2.00e-11 60.5
Msa1091740 MtrunA17_Chr5g0440191 33.858 127 67 3 2 113 933 1057 2.49e-11 60.1
Msa1091740 MtrunA17_Chr8g0358821 36.937 111 54 3 2 102 849 953 2.80e-11 60.1
Msa1091740 MtrunA17_Chr2g0279661 37.273 110 57 3 1 102 591 696 3.23e-11 59.7
Msa1091740 MtrunA17_Chr4g0069061 33.613 119 63 3 4 113 80 191 3.41e-11 58.5
Msa1091740 MtrunA17_Chr3g0137191 33.628 113 67 2 2 107 225 336 3.79e-11 59.3
Msa1091740 MtrunA17_Chr1g0175451 31.061 132 73 3 2 117 497 626 3.93e-11 59.3
Msa1091740 MtrunA17_Chr2g0306811 30.435 115 65 2 2 102 271 384 4.05e-11 59.3
Msa1091740 MtrunA17_Chr3g0125471 36.364 110 58 3 1 102 521 626 4.17e-11 59.3
Msa1091740 MtrunA17_Chr4g0070411 33.884 121 64 3 2 113 252 365 4.90e-11 59.3
Msa1091740 MtrunA17_Chr4g0058761 34.259 108 62 2 3 102 937 1043 5.28e-11 59.3
Msa1091740 MtrunA17_Chr1g0183231 32.743 113 59 3 1 102 866 972 5.76e-11 58.9
Msa1091740 MtrunA17_Chr4g0071371 33.028 109 63 3 2 102 297 403 9.21e-11 58.2
Msa1091740 MtrunA17_Chr4g0072901 34.906 106 64 2 2 102 204 309 9.38e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1091740 AT1G35710.1 46.667 105 55 1 2 106 1016 1119 1.51e-23 95.5
Msa1091740 AT4G08850.1 44.340 106 57 2 2 106 940 1044 1.29e-22 92.8
Msa1091740 AT1G17230.1 39.815 108 57 2 2 102 962 1068 3.03e-17 77.4
Msa1091740 AT1G17230.2 39.815 108 57 2 2 102 962 1068 3.58e-17 77.4
Msa1091740 AT2G33170.2 41.667 108 56 2 2 102 988 1095 4.14e-17 77.0
Msa1091740 AT2G33170.1 41.667 108 56 2 2 102 988 1095 4.14e-17 77.0
Msa1091740 AT3G49670.1 41.732 127 57 6 2 119 853 971 5.38e-17 76.6
Msa1091740 AT1G34420.1 40.000 105 58 2 2 102 856 959 8.05e-17 76.3
Msa1091740 AT5G63930.1 40.741 108 56 2 2 102 968 1074 9.78e-17 75.9
Msa1091740 AT5G63930.2 40.741 108 56 2 2 102 904 1010 9.93e-17 75.9
Msa1091740 AT5G65700.1 38.406 138 62 5 2 121 857 989 2.81e-16 74.7
Msa1091740 AT5G65700.2 38.406 138 62 5 2 121 857 989 2.81e-16 74.7
Msa1091740 AT5G48940.1 41.905 105 55 4 2 102 957 1059 4.14e-15 71.2
Msa1091740 AT3G19700.1 37.500 112 56 3 1 102 852 959 4.60e-15 71.2
Msa1091740 AT1G34110.1 40.000 110 55 4 2 102 938 1045 3.92e-14 68.6
Msa1091740 AT1G34110.2 40.000 110 55 4 2 102 938 1045 4.45e-14 68.6
Msa1091740 AT4G20270.1 35.714 112 59 2 2 104 874 981 7.74e-14 67.8
Msa1091740 AT5G49660.1 34.677 124 68 3 1 116 824 942 8.03e-14 67.8
Msa1091740 AT3G24240.1 40.000 110 51 3 2 102 956 1059 9.69e-14 67.4
Msa1091740 AT4G28650.1 37.273 110 59 2 1 102 865 972 1.20e-13 67.0
Msa1091740 AT1G75820.1 35.965 114 56 3 2 102 854 963 2.31e-13 66.2
Msa1091740 AT1G09970.1 33.929 112 62 2 1 104 842 949 2.33e-13 66.2
Msa1091740 AT1G28440.1 37.615 109 56 3 1 102 852 955 5.00e-13 65.5
Msa1091740 AT4G28490.1 36.449 107 58 2 2 102 858 960 9.56e-13 64.7
Msa1091740 AT5G65710.1 69.048 42 13 0 2 43 858 899 2.71e-12 63.2
Msa1091740 AT1G69730.1 28.676 136 82 3 1 128 608 736 3.38e-12 63.2
Msa1091740 AT2G39660.1 34.545 110 60 2 2 102 239 345 4.78e-12 62.4
Msa1091740 AT3G55450.2 33.043 115 65 2 2 107 271 382 6.83e-12 62.0
Msa1091740 AT5G01020.1 33.884 121 64 3 2 113 236 349 8.03e-12 61.6
Msa1091740 AT1G29720.1 32.593 135 70 3 2 128 833 954 8.66e-12 62.0
Msa1091740 AT1G21245.1 30.657 137 80 3 1 129 1 130 9.25e-12 59.7
Msa1091740 AT1G09970.2 33.628 113 62 3 1 104 842 950 9.50e-12 61.6
Msa1091740 AT5G61480.1 31.818 110 66 2 1 102 885 993 1.14e-11 61.6
Msa1091740 AT3G55450.1 33.043 115 65 2 2 107 234 345 1.28e-11 61.2
Msa1091740 AT1G31420.2 35.043 117 71 3 1 112 464 580 1.28e-11 61.2
Msa1091740 AT1G31420.1 35.043 117 71 3 1 112 465 581 1.28e-11 61.2
Msa1091740 AT1G31420.3 35.043 117 71 3 1 112 465 581 1.28e-11 61.2
Msa1091740 AT4G28350.1 34.259 108 64 3 2 104 512 617 1.63e-11 60.8
Msa1091740 AT4G26540.1 30.612 147 81 4 2 129 927 1071 1.78e-11 60.8
Msa1091740 AT5G62230.1 31.884 138 79 4 2 129 809 941 2.28e-11 60.5
Msa1091740 AT5G62230.2 31.884 138 79 4 2 129 761 893 2.32e-11 60.5
Msa1091740 AT1G07650.2 35.714 140 77 5 2 133 847 981 2.36e-11 60.5
Msa1091740 AT1G07650.1 35.714 140 77 5 2 133 841 975 2.65e-11 60.5
Msa1091740 AT1G07650.3 35.714 140 77 5 2 133 815 949 2.70e-11 60.5
Msa1091740 AT5G62710.2 33.929 112 62 2 1 104 439 546 2.70e-11 60.5
Msa1091740 AT4G29990.1 37.615 109 58 3 1 102 733 838 2.94e-11 60.5
Msa1091740 AT5G62710.1 33.929 112 62 2 1 104 473 580 3.12e-11 60.1
Msa1091740 AT5G03140.1 33.333 132 70 3 2 119 533 660 5.22e-11 59.7
Msa1091740 AT1G34300.1 29.487 156 86 6 2 139 645 794 5.47e-11 59.7
Msa1091740 AT1G07650.4 33.333 135 69 4 2 128 628 749 6.18e-11 59.3
Msa1091740 AT5G07180.2 35.514 107 58 3 2 102 716 817 6.35e-11 59.3
Msa1091740 AT5G07180.1 34.862 109 60 3 2 104 812 915 6.54e-11 59.3
Msa1091740 AT1G08590.1 31.818 110 66 2 1 102 888 996 6.64e-11 59.3
Msa1091740 AT5G56790.1 33.945 109 61 2 2 102 551 656 7.19e-11 59.3
Msa1091740 AT2G07180.1 31.034 116 68 2 2 108 257 369 9.02e-11 58.9
Msa1091740 AT2G07180.2 31.034 116 68 2 2 108 257 369 9.02e-11 58.9
Msa1091740 AT1G21210.1 35.135 111 59 3 1 102 570 676 9.18e-11 58.9

Find 19 sgRNAs with CRISPR-Local

Find 23 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTATAACTATGTCATTATT+TGG 0.194445 7_3:+7259845 None:intergenic
GTCGCACTTGAAACTTTAAT+TGG 0.219481 7_3:-7259959 Msa1091740:CDS
TCACTCAAAGGAATGCTTAA+TGG 0.247563 7_3:+7259716 None:intergenic
TCCAATCGAACAATGGTTGC+TGG 0.409950 7_3:-7260238 None:intergenic
TGCAGAGCTTGCCTATACTA+TGG 0.423497 7_3:-7260020 Msa1091740:intron
AAGTGTGATGTGTATAGTTT+TGG 0.437562 7_3:-7259986 Msa1091740:CDS
TTCATTCACAGCCATAGTAT+AGG 0.471251 7_3:+7260009 None:intergenic
ACTATGTCATTATTTGGAAG+TGG 0.499298 7_3:+7259851 None:intergenic
ACAATGGTTGCTGGAACCAT+TGG 0.503373 7_3:-7260229 Msa1091740:CDS
TGCACTGAAATTTCACTCAA+AGG 0.510871 7_3:+7259704 None:intergenic
ACCATTGGATATATAGCTCC+TGG 0.511899 7_3:-7260214 Msa1091740:intron
TTCATTGTTTGTCGAGAACG+AGG 0.555418 7_3:+7259773 None:intergenic
ACCAGGAGCTATATATCCAA+TGG 0.570167 7_3:+7260213 None:intergenic
AATGCTTAATGGTGTAAGCT+CGG 0.600733 7_3:+7259727 None:intergenic
AGCTCGGTGACAAAACTTTG+TGG 0.605930 7_3:+7259743 None:intergenic
TGACATAATTCATGTTGTCG+TGG 0.644691 7_3:-7259822 Msa1091740:CDS
GTGATGACAATATATCCTCA+CGG 0.664274 7_3:+7259930 None:intergenic
TATTTGGAAGTGGAAGACGC+TGG 0.703453 7_3:+7259861 None:intergenic
TTTAATTGGAAAGCGCCGTG+AGG 0.722129 7_3:-7259945 Msa1091740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATCAATGATTAATTTACC+AGG + chr7_3:7259685-7259704 None:intergenic 20.0%
!!! TCAAAGCATTGTTTTATATT+GGG - chr7_3:7260217-7260236 Msa1091740:CDS 20.0%
!! GAACATGTATGTTATTTATG+TGG + chr7_3:7259772-7259791 None:intergenic 25.0%
! TCAAATCACTGAGTATTTAA+AGG + chr7_3:7259834-7259853 None:intergenic 25.0%
! CGTATAACTATGTCATTATT+TGG + chr7_3:7260036-7260055 None:intergenic 25.0%
!!! CTCAAAGCATTGTTTTATAT+TGG - chr7_3:7260216-7260235 Msa1091740:CDS 25.0%
! AAGTGTGATGTGTATAGTTT+TGG - chr7_3:7259892-7259911 Msa1091740:CDS 30.0%
ACTATGTCATTATTTGGAAG+TGG + chr7_3:7260030-7260049 None:intergenic 30.0%
TTCATTCACAGCCATAGTAT+AGG + chr7_3:7259872-7259891 None:intergenic 35.0%
GTCGCACTTGAAACTTTAAT+TGG - chr7_3:7259919-7259938 Msa1091740:CDS 35.0%
GTGATGACAATATATCCTCA+CGG + chr7_3:7259951-7259970 None:intergenic 35.0%
TGACATAATTCATGTTGTCG+TGG - chr7_3:7260056-7260075 Msa1091740:intron 35.0%
AATGCTTAATGGTGTAAGCT+CGG + chr7_3:7260154-7260173 None:intergenic 35.0%
TCACTCAAAGGAATGCTTAA+TGG + chr7_3:7260165-7260184 None:intergenic 35.0%
TGCACTGAAATTTCACTCAA+AGG + chr7_3:7260177-7260196 None:intergenic 35.0%
ACCATTGGATATATAGCTCC+TGG - chr7_3:7259664-7259683 Msa1091740:CDS 40.0%
ACCAGGAGCTATATATCCAA+TGG + chr7_3:7259668-7259687 None:intergenic 40.0%
! TTTTTGTCTGATGCACATCG+TGG - chr7_3:7259735-7259754 Msa1091740:CDS 40.0%
TTCATTGTTTGTCGAGAACG+AGG + chr7_3:7260108-7260127 None:intergenic 40.0%
TGCAGAGCTTGCCTATACTA+TGG - chr7_3:7259858-7259877 Msa1091740:CDS 45.0%
!! TTTAATTGGAAAGCGCCGTG+AGG - chr7_3:7259933-7259952 Msa1091740:CDS 45.0%
TATTTGGAAGTGGAAGACGC+TGG + chr7_3:7260020-7260039 None:intergenic 45.0%
! AGCTCGGTGACAAAACTTTG+TGG + chr7_3:7260138-7260157 None:intergenic 45.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 7259652 7260248 7259652 ID=Msa1091740;Name=Msa1091740
chr7_3 mRNA 7259652 7260248 7259652 ID=Msa1091740-mRNA-1;Parent=Msa1091740;Name=Msa1091740-mRNA-1;_AED=0.51;_eAED=0.51;_QI=0|0|0|0.5|1|1|2|0|139
chr7_3 exon 7260215 7260248 7260215 ID=Msa1091740-mRNA-1:exon:2288;Parent=Msa1091740-mRNA-1
chr7_3 exon 7259652 7260037 7259652 ID=Msa1091740-mRNA-1:exon:2287;Parent=Msa1091740-mRNA-1
chr7_3 CDS 7260215 7260248 7260215 ID=Msa1091740-mRNA-1:cds;Parent=Msa1091740-mRNA-1
chr7_3 CDS 7259652 7260037 7259652 ID=Msa1091740-mRNA-1:cds;Parent=Msa1091740-mRNA-1
Gene Sequence

>Msa1091740

ATGGTTGCTGGAACCATTGGATATATAGCTCCTGAGCTTGCCTATACTATGGCTGTGAATGAAAAGTGTGATGTGTATAGTTTTGGTGTAGTCGCACTTGAAACTTTAATTGGAAAGCGCCGTGAGGATATATTGTCATCACTTCAATCAACATCGACACAAAGTATCAAATTATGTCAAGTATTAGACCAGCGTCTTCCACTTCCAAATAATGACATAGTTATACGTGACATAATTCATGTTGTCGTGGTAGCATTTGCATGCTTAAATGTCAATCCTCGTTCTCGACAAACAATGAAACGTGTGCCACAAAGTTTTGTCACCGAGCTTACACCATTAAGCATTCCTTTGAGTGAAATTTCAGTGCAGCAACTAATGAGTGAAGAACTCAAAGCATTGTTTTATATTGGGAACCCTTGA
Protein sequence

>Msa1091740

MVAGTIGYIAPELAYTMAVNEKCDVYSFGVVALETLIGKRREDILSSLQSTSTQSIKLCQVLDQRLPLPNNDIVIRDIIHVVVVAFACLNVNPRSRQTMKRVPQSFVTELTPLSIPLSEISVQQLMSEELKALFYIGNP*