AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1092440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1092440 MtrunA17_Chr7g0228401 80.868 507 69 3 1 482 1 504 0.0 816
Msa1092440 MtrunA17_Chr7g0228531 47.908 478 184 9 1 475 1 416 2.01e-141 413
Msa1092440 MtrunA17_Chr7g0228481 47.071 478 188 10 1 475 1 416 5.29e-134 394
Msa1092440 MtrunA17_Chr1g0177901 61.165 206 76 1 268 473 5 206 2.19e-84 259
Msa1092440 MtrunA17_Chr7g0233161 48.534 307 118 3 4 308 82 350 3.22e-84 263
Msa1092440 MtrunA17_Chr7g0233061 33.619 467 199 9 1 465 1 358 2.72e-69 225
Msa1092440 MtrunA17_Chr4g0046181 45.161 310 130 3 1 308 1 272 2.10e-66 215
Msa1092440 MtrunA17_Chr3g0117511 47.549 204 99 2 206 409 139 334 2.68e-50 177
Msa1092440 MtrunA17_Chr7g0233151 51.176 170 66 4 307 474 1 155 8.33e-48 162
Msa1092440 MtrunA17_Chr4g0058991 51.515 165 71 2 227 391 187 342 7.10e-47 168
Msa1092440 MtrunA17_Chr5g0429661 53.435 131 53 3 260 383 125 254 1.76e-43 157
Msa1092440 MtrunA17_Chr7g0238631 61.000 100 38 1 260 358 116 215 6.84e-36 140
Msa1092440 MtrunA17_Chr1g0157731 53.465 101 46 1 260 359 94 194 1.66e-32 131
Msa1092440 MtrunA17_Chr3g0139671 53.465 101 46 1 260 359 88 188 2.81e-32 130
Msa1092440 MtrunA17_Chr5g0397841 56.842 95 41 0 257 351 110 204 6.34e-31 124
Msa1092440 MtrunA17_Chr4g0022901 40.714 140 78 3 257 393 15 152 1.55e-28 114
Msa1092440 MtrunA17_Chr4g0008551 52.083 96 46 0 260 355 41 136 1.99e-28 115
Msa1092440 MtrunA17_Chr3g0133601 48.077 104 54 0 250 353 30 133 9.21e-28 110
Msa1092440 MtrunA17_Chr5g0401731 49.057 106 54 0 248 353 6 111 1.65e-27 112
Msa1092440 MtrunA17_Chr7g0270891 31.795 195 121 4 257 447 14 200 5.79e-27 111
Msa1092440 MtrunA17_Chr4g0053431 50.000 94 47 0 260 353 8 101 7.49e-27 109
Msa1092440 MtrunA17_Chr4g0046171 48.921 139 54 4 338 474 1 124 8.87e-27 105
Msa1092440 MtrunA17_Chr2g0323351 44.444 117 61 2 257 372 14 127 1.81e-26 107
Msa1092440 MtrunA17_Chr4g0022931 35.220 159 82 4 257 409 15 158 2.43e-26 107
Msa1092440 MtrunA17_Chr4g0022911 43.810 105 56 2 257 358 15 119 4.95e-26 107
Msa1092440 MtrunA17_Chr2g0281071 49.485 97 48 1 260 355 18 114 2.13e-25 107
Msa1092440 MtrunA17_Chr4g0037141 45.763 118 56 3 254 363 11 128 3.04e-25 105
Msa1092440 MtrunA17_Chr4g0058631 41.667 132 70 4 257 382 14 144 4.30e-25 106
Msa1092440 MtrunA17_Chr1g0211161 46.939 98 51 1 257 353 15 112 4.40e-25 103
Msa1092440 MtrunA17_Chr6g0480581 46.392 97 52 0 255 351 2 98 4.62e-25 103
Msa1092440 MtrunA17_Chr4g0048511 49.485 97 48 1 260 355 18 114 5.66e-25 105
Msa1092440 MtrunA17_Chr8g0385321 45.283 106 56 2 254 357 11 116 6.30e-25 104
Msa1092440 MtrunA17_Chr6g0460661 34.356 163 91 2 251 413 10 156 8.12e-25 100
Msa1092440 MtrunA17_Chr3g0117091 45.000 100 54 1 257 355 14 113 8.42e-25 105
Msa1092440 MtrunA17_Chr1g0193801 45.918 98 52 1 257 353 14 111 1.06e-24 105
Msa1092440 MtrunA17_Chr5g0410961 44.762 105 57 1 252 355 9 113 1.16e-24 104
Msa1092440 MtrunA17_Chr8g0342541 41.176 102 59 1 255 355 12 113 1.54e-24 104
Msa1092440 MtrunA17_Chr6g0454921 45.192 104 57 0 250 353 8 111 1.54e-24 101
Msa1092440 MtrunA17_Chr4g0055981 39.231 130 76 2 260 386 60 189 1.72e-24 101
Msa1092440 MtrunA17_Chr7g0254261 34.259 216 118 5 255 467 87 281 2.07e-24 104
Msa1092440 MtrunA17_Chr5g0435101 45.631 103 55 1 254 355 10 112 2.41e-24 100
Msa1092440 MtrunA17_Chr5g0417621 38.255 149 84 2 222 369 106 247 2.44e-24 105
Msa1092440 MtrunA17_Chr3g0131121 46.667 105 54 2 255 357 12 116 2.49e-24 102
Msa1092440 MtrunA17_Chr2g0328771 42.478 113 60 2 257 364 22 134 2.83e-24 103
Msa1092440 MtrunA17_Chr1g0193371 42.241 116 64 2 257 369 14 129 3.11e-24 103
Msa1092440 MtrunA17_Chr8g0342521 42.157 102 58 1 255 355 12 113 5.11e-24 102
Msa1092440 MtrunA17_Chr5g0397231 39.535 129 77 1 257 384 14 142 8.51e-24 102
Msa1092440 MtrunA17_Chr5g0437321 48.936 94 48 0 260 353 22 115 9.01e-24 100
Msa1092440 MtrunA17_Chr8g0354661 47.321 112 56 2 243 352 25 135 1.04e-23 104
Msa1092440 MtrunA17_Chr2g0330041 41.176 102 59 1 255 355 12 113 1.26e-23 102
Msa1092440 MtrunA17_Chr5g0395281 47.872 94 48 1 260 352 17 110 1.43e-23 100
Msa1092440 MtrunA17_Chr4g0042501 44.144 111 61 1 260 369 108 218 1.66e-23 102
Msa1092440 MtrunA17_Chr3g0099131 48.000 100 51 1 254 352 40 139 1.67e-23 103
Msa1092440 MtrunA17_Chr7g0271241 44.792 96 52 1 257 351 14 109 1.81e-23 102
Msa1092440 MtrunA17_Chr2g0309911 43.750 96 53 1 259 353 15 110 1.84e-23 100
Msa1092440 MtrunA17_Chr3g0088461 47.000 100 52 1 257 355 24 123 2.02e-23 101
Msa1092440 MtrunA17_Chr5g0440781 48.113 106 53 2 254 357 11 116 2.03e-23 97.4
Msa1092440 MtrunA17_Chr7g0274581 45.263 95 49 2 260 352 17 110 2.27e-23 97.8
Msa1092440 MtrunA17_Chr6g0452271 43.689 103 57 1 254 355 11 113 2.30e-23 100
Msa1092440 MtrunA17_Chr4g0032401 37.500 144 83 2 257 393 19 162 2.40e-23 100
Msa1092440 MtrunA17_Chr1g0154031 48.936 94 47 1 260 352 81 174 2.46e-23 102
Msa1092440 MtrunA17_Chr8g0387421 45.361 97 52 1 257 352 14 110 3.05e-23 100
Msa1092440 MtrunA17_Chr3g0115821 44.118 102 56 1 252 352 9 110 3.30e-23 100
Msa1092440 MtrunA17_Chr1g0187761 41.964 112 63 2 260 369 17 128 3.32e-23 98.6
Msa1092440 MtrunA17_Chr3g0080861 47.619 105 53 2 257 359 39 143 3.41e-23 102
Msa1092440 MtrunA17_Chr4g0039971 47.872 94 48 1 260 352 18 111 3.50e-23 100
Msa1092440 MtrunA17_Chr5g0441141 48.113 106 53 2 254 357 11 116 3.58e-23 99.0
Msa1092440 MtrunA17_Chr5g0440761 48.113 106 53 2 254 357 11 116 3.96e-23 98.6
Msa1092440 MtrunA17_Chr3g0125801 50.000 92 46 0 260 351 19 110 6.03e-23 98.6
Msa1092440 MtrunA17_Chr8g0349261 49.474 95 46 2 260 352 18 112 9.49e-23 98.2
Msa1092440 MtrunA17_Chr8g0346561 47.872 94 48 1 260 352 17 110 9.89e-23 98.2
Msa1092440 MtrunA17_Chr4g0044421 42.991 107 56 2 252 355 9 113 1.12e-22 95.5
Msa1092440 MtrunA17_Chr7g0275911 48.936 94 47 1 260 352 17 110 1.20e-22 97.1
Msa1092440 MtrunA17_Chr8g0342481 39.806 103 60 2 255 355 12 114 1.26e-22 99.8
Msa1092440 MtrunA17_Chr1g0203411 46.809 94 49 1 260 352 17 110 1.41e-22 97.8
Msa1092440 MtrunA17_Chr7g0261281 46.316 95 48 2 260 352 17 110 1.53e-22 97.4
Msa1092440 MtrunA17_Chr2g0311221 48.936 94 47 1 260 352 19 112 1.73e-22 98.2
Msa1092440 MtrunA17_Chr2g0323411 47.423 97 50 1 260 355 17 113 1.81e-22 98.2
Msa1092440 MtrunA17_Chr4g0042671 45.745 94 50 1 260 352 17 110 2.44e-22 99.0
Msa1092440 MtrunA17_Chr4g0070641 46.809 94 49 1 260 352 17 110 2.55e-22 93.6
Msa1092440 MtrunA17_Chr4g0070611 46.809 94 49 1 260 352 17 110 4.10e-22 96.7
Msa1092440 MtrunA17_Chr1g0167661 45.631 103 53 2 260 359 17 119 4.19e-22 95.5
Msa1092440 MtrunA17_Chr4g0022891 40.952 105 61 1 257 360 14 118 4.54e-22 95.1
Msa1092440 MtrunA17_Chr4g0057031 43.137 102 57 1 252 352 9 110 5.73e-22 95.5
Msa1092440 MtrunA17_Chr7g0240821 40.541 111 62 3 260 367 6 115 1.07e-21 93.6
Msa1092440 MtrunA17_Chr5g0417821 44.118 102 56 1 251 351 3 104 1.07e-21 95.1
Msa1092440 MtrunA17_Chr8g0362231 41.818 110 62 1 260 367 25 134 1.33e-21 97.1
Msa1092440 MtrunA17_Chr5g0416341 46.237 93 50 0 260 352 29 121 1.81e-21 97.1
Msa1092440 MtrunA17_Chr7g0217741 45.745 94 50 1 260 352 17 110 1.83e-21 94.7
Msa1092440 MtrunA17_Chr1g0167691 45.745 94 50 1 260 352 17 110 1.88e-21 93.6
Msa1092440 MtrunA17_Chr6g0460671 47.253 91 48 0 260 350 102 192 2.82e-21 95.1
Msa1092440 MtrunA17_Chr5g0434571 45.745 94 50 1 260 352 53 146 5.02e-21 94.4
Msa1092440 MtrunA17_Chr2g0327351 38.983 118 70 2 254 369 11 128 5.07e-21 93.6
Msa1092440 MtrunA17_Chr3g0135311 36.424 151 91 4 254 399 11 161 5.81e-21 94.0
Msa1092440 MtrunA17_Chr5g0441131 45.192 104 55 2 254 355 8 111 6.86e-21 90.1
Msa1092440 MtrunA17_Chr1g0151941 43.158 95 52 2 260 352 17 111 7.21e-21 92.0
Msa1092440 MtrunA17_Chr4g0022881 40.404 99 58 1 255 352 12 110 8.57e-21 91.3
Msa1092440 MtrunA17_Chr3g0110351 34.545 165 101 4 260 421 17 177 1.18e-20 92.4
Msa1092440 MtrunA17_Chr1g0192411 38.686 137 74 2 257 392 14 141 1.61e-20 93.6
Msa1092440 MtrunA17_Chr5g0434931 40.000 100 59 1 257 355 37 136 2.09e-20 91.3
Msa1092440 MtrunA17_Chr1g0152011 39.167 120 70 3 254 370 11 130 2.30e-20 92.0
Msa1092440 MtrunA17_Chr3g0103281 42.000 100 57 1 254 352 11 110 2.46e-20 92.0
Msa1092440 MtrunA17_Chr7g0228991 35.000 120 74 2 234 352 11 127 2.57e-20 90.9
Msa1092440 MtrunA17_Chr8g0343831 42.424 99 56 1 255 352 8 106 2.72e-20 90.1
Msa1092440 MtrunA17_Chr3g0104491 51.250 80 35 1 307 382 17 96 3.24e-20 90.9
Msa1092440 MtrunA17_Chr4g0028311 42.991 107 58 3 260 363 17 123 3.78e-20 91.3
Msa1092440 MtrunA17_Chr3g0121241 41.489 94 54 1 260 352 47 140 4.49e-20 90.9
Msa1092440 MtrunA17_Chr7g0247131 51.351 74 34 1 281 352 3 76 4.84e-20 89.7
Msa1092440 MtrunA17_Chr5g0400821 41.964 112 62 3 254 362 11 122 7.12e-20 90.1
Msa1092440 MtrunA17_Chr1g0209661 40.541 111 61 2 260 365 32 142 7.43e-20 90.1
Msa1092440 MtrunA17_Chr1g0203441 43.299 97 54 1 257 352 15 111 7.47e-20 89.4
Msa1092440 MtrunA17_Chr4g0013361 32.500 160 99 4 260 410 15 174 1.12e-19 89.4
Msa1092440 MtrunA17_Chr6g0470971 40.187 107 63 1 257 362 16 122 1.33e-19 89.0
Msa1092440 MtrunA17_Chr7g0228891 43.617 94 52 1 260 352 17 110 1.34e-19 88.6
Msa1092440 MtrunA17_Chr5g0434911 40.000 100 59 1 257 355 23 122 2.06e-19 88.2
Msa1092440 MtrunA17_Chr6g0453471 42.553 94 53 1 260 352 17 110 2.16e-19 89.7
Msa1092440 MtrunA17_Chr7g0228231 38.393 112 68 1 242 352 1 112 2.42e-19 86.3
Msa1092440 MtrunA17_Chr7g0220341 41.748 103 57 1 253 352 23 125 2.47e-19 87.8
Msa1092440 MtrunA17_Chr1g0180391 42.000 100 57 1 254 352 18 117 2.54e-19 87.0
Msa1092440 MtrunA17_Chr8g0334881 43.000 100 55 2 260 357 15 114 2.76e-19 88.6
Msa1092440 MtrunA17_Chr5g0434841 41.000 100 58 1 257 355 22 121 3.24e-19 88.6
Msa1092440 MtrunA17_Chr4g0054391 41.000 100 57 2 254 351 11 110 3.31e-19 87.8
Msa1092440 MtrunA17_Chr2g0322521 42.500 120 68 1 234 352 8 127 3.43e-19 89.4
Msa1092440 MtrunA17_Chr4g0068061 41.000 100 58 1 257 355 14 113 3.55e-19 88.6
Msa1092440 MtrunA17_Chr7g0217221 43.617 94 52 1 260 352 17 110 5.20e-19 87.0
Msa1092440 MtrunA17_Chr1g0168661 37.705 122 69 3 260 375 26 146 5.60e-19 86.7
Msa1092440 MtrunA17_Chr5g0434831 40.206 97 57 1 260 355 12 108 7.20e-19 84.7
Msa1092440 MtrunA17_Chr6g0450101 37.273 110 67 2 260 367 19 128 8.12e-19 85.1
Msa1092440 MtrunA17_Chr1g0186061 41.489 94 54 1 260 352 25 118 9.40e-19 85.9
Msa1092440 MtrunA17_Chr4g0030881 39.640 111 59 1 260 362 12 122 1.16e-18 85.9
Msa1092440 MtrunA17_Chr7g0264641 41.584 101 57 2 254 352 11 111 1.41e-18 85.9
Msa1092440 MtrunA17_Chr2g0327821 39.316 117 67 2 260 375 11 124 2.34e-18 84.3
Msa1092440 MtrunA17_Chr4g0072751 42.574 101 56 2 254 352 11 111 2.79e-18 86.3
Msa1092440 MtrunA17_Chr5g0421201 51.765 85 35 2 309 392 12 91 2.91e-18 82.8
Msa1092440 MtrunA17_Chr5g0434901 48.485 66 34 0 290 355 9 74 3.13e-18 80.5
Msa1092440 MtrunA17_Chr4g0060721 40.777 103 55 3 260 358 18 118 3.56e-18 85.5
Msa1092440 MtrunA17_Chr7g0254411 42.574 101 56 2 260 358 17 117 9.73e-18 84.3
Msa1092440 MtrunA17_Chr8g0360111 40.206 97 57 1 257 352 27 123 1.86e-17 82.4
Msa1092440 MtrunA17_Chr3g0092401 41.237 97 56 1 260 355 18 114 2.07e-17 83.2
Msa1092440 MtrunA17_Chr1g0194301 39.362 94 56 1 260 352 38 131 2.09e-17 82.4
Msa1092440 MtrunA17_Chr6g0453211 40.426 94 55 1 260 352 17 110 2.48e-17 82.8
Msa1092440 MtrunA17_Chr1g0194291 38.053 113 69 1 241 352 7 119 2.67e-17 82.0
Msa1092440 MtrunA17_Chr1g0194951 43.617 94 52 1 260 352 17 110 3.60e-17 83.2
Msa1092440 MtrunA17_Chr3g0099141 36.937 111 69 1 227 336 12 122 6.82e-17 77.4
Msa1092440 MtrunA17_Chr3g0104501 55.357 56 25 0 253 308 129 184 2.87e-16 77.4
Msa1092440 MtrunA17_Chr2g0323321 39.474 76 45 1 260 334 16 91 8.02e-16 73.6
Msa1092440 MtrunA17_Chr7g0269831 44.531 128 60 4 257 381 14 133 9.11e-16 78.6
Msa1092440 MtrunA17_Chr2g0293911 39.216 102 61 1 252 352 21 122 9.71e-16 78.2
Msa1092440 MtrunA17_Chr7g0229101 46.970 66 35 0 290 355 8 73 1.36e-15 75.5
Msa1092440 MtrunA17_Chr3g0093811 42.500 80 42 2 277 352 1 80 2.50e-15 76.3
Msa1092440 MtrunA17_Chr6g0487491 36.893 103 55 3 260 352 17 119 3.22e-15 75.9
Msa1092440 MtrunA17_Chr5g0425591 45.238 84 44 2 254 335 8 91 5.69e-15 70.5
Msa1092440 MtrunA17_Chr4g0068921 40.404 99 58 1 260 357 29 127 7.85e-15 73.2
Msa1092440 MtrunA17_Chr5g0395221 43.056 72 40 1 260 330 17 88 5.09e-14 67.8
Msa1092440 MtrunA17_Chr7g0238651 29.940 167 99 4 260 415 10 169 7.71e-14 72.8
Msa1092440 MtrunA17_Chr7g0229131 43.939 66 37 0 290 355 8 73 7.91e-14 69.7
Msa1092440 MtrunA17_Chr4g0042611 40.278 72 42 1 260 330 17 88 7.97e-14 67.0
Msa1092440 MtrunA17_Chr8g0342511 36.111 72 45 1 259 329 16 87 5.08e-13 65.1
Msa1092440 MtrunA17_Chr8g0342531 35.000 80 49 2 259 336 16 94 6.35e-13 67.0
Msa1092440 MtrunA17_Chr7g0274481 36.957 92 57 1 259 350 9 99 9.00e-13 70.9
Msa1092440 MtrunA17_Chr6g0483051 35.165 91 58 1 260 350 72 161 1.49e-12 70.1
Msa1092440 MtrunA17_Chr6g0483051 39.362 94 56 1 257 350 120 212 1.96e-12 69.7
Msa1092440 MtrunA17_Chr8g0342471 37.333 75 45 2 259 331 16 90 1.97e-12 64.7
Msa1092440 MtrunA17_Chr8g0342461 36.000 75 46 2 259 331 16 90 4.48e-12 63.5
Msa1092440 MtrunA17_Chr5g0397691 35.417 96 59 1 255 350 5 97 2.47e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1092440 AT4G18770.1 64.754 122 42 1 260 381 220 340 7.83e-48 171
Msa1092440 AT3G27785.1 41.250 240 123 7 153 386 94 321 8.35e-48 171
Msa1092440 AT5G40360.1 54.887 133 57 2 257 387 158 289 2.85e-42 154
Msa1092440 AT5G11050.1 57.377 122 52 0 244 365 92 213 2.55e-40 150
Msa1092440 AT5G58850.1 44.242 165 76 2 254 402 102 266 3.24e-40 150
Msa1092440 AT2G25230.1 52.033 123 58 1 260 382 29 150 4.24e-36 134
Msa1092440 AT3G09370.1 61.702 94 36 0 260 353 133 226 2.59e-35 138
Msa1092440 AT3G09370.2 61.702 94 36 0 260 353 138 231 2.75e-35 138
Msa1092440 AT3G09370.3 61.702 94 36 0 260 353 146 239 4.47e-35 137
Msa1092440 AT5G11510.3 55.446 101 44 1 260 359 84 184 1.53e-34 138
Msa1092440 AT5G11510.1 55.446 101 44 1 260 359 84 184 1.53e-34 138
Msa1092440 AT5G11510.4 55.446 101 44 1 260 359 84 184 1.53e-34 138
Msa1092440 AT5G11510.2 55.446 101 44 1 260 359 84 184 1.82e-34 137
Msa1092440 AT5G11510.5 55.446 101 44 1 260 359 84 184 2.00e-34 137
Msa1092440 AT5G02320.1 60.638 94 37 0 260 353 130 223 5.27e-34 135
Msa1092440 AT5G02320.2 60.638 94 37 0 260 353 130 223 5.27e-34 135
Msa1092440 AT5G02320.3 60.638 94 37 0 260 353 70 163 6.30e-34 134
Msa1092440 AT5G40430.1 45.865 133 68 3 251 382 48 177 1.81e-32 124
Msa1092440 AT4G32730.5 53.465 101 46 1 260 359 90 190 3.06e-32 131
Msa1092440 AT4G32730.4 53.465 101 46 1 260 359 90 190 3.06e-32 131
Msa1092440 AT4G32730.3 53.465 101 46 1 260 359 90 190 3.06e-32 131
Msa1092440 AT4G32730.2 53.465 101 46 1 260 359 90 190 3.06e-32 131
Msa1092440 AT4G32730.1 53.465 101 46 1 260 359 90 190 3.95e-32 130
Msa1092440 AT4G00540.2 44.521 146 64 4 216 357 75 207 1.19e-27 114
Msa1092440 AT4G00540.2 35.644 101 56 3 260 351 49 149 2.24e-11 65.9
Msa1092440 AT4G00540.1 44.521 146 64 4 216 357 73 205 2.76e-27 114
Msa1092440 AT4G00540.1 35.644 101 56 3 260 351 47 147 3.65e-11 65.5
Msa1092440 AT3G55730.1 53.125 96 45 0 260 355 59 154 1.32e-26 111
Msa1092440 AT1G57560.2 33.333 183 94 4 257 435 14 172 5.55e-26 107
Msa1092440 AT4G33450.1 53.933 89 41 0 260 348 22 110 1.53e-25 105
Msa1092440 AT4G38620.1 48.544 103 52 1 254 355 11 113 2.09e-25 105
Msa1092440 AT3G09230.1 50.000 96 48 0 260 355 58 153 2.10e-25 108
Msa1092440 AT3G28470.1 46.000 100 53 1 254 352 11 110 3.18e-25 106
Msa1092440 AT4G21440.1 50.515 97 47 1 260 355 17 113 3.71e-25 106
Msa1092440 AT1G22640.1 49.515 103 50 2 257 357 14 116 8.14e-25 103
Msa1092440 AT5G67300.1 50.000 94 47 0 260 353 9 102 9.05e-25 104
Msa1092440 AT3G50060.1 48.936 94 48 0 260 353 9 102 1.29e-24 103
Msa1092440 AT3G11440.2 50.000 94 46 1 260 352 46 139 1.31e-24 106
Msa1092440 AT5G12870.1 46.729 107 55 2 257 361 20 126 1.57e-24 103
Msa1092440 AT4G37260.1 51.064 94 46 0 260 353 16 109 1.81e-24 103
Msa1092440 AT4G01680.1 39.062 128 66 3 257 381 14 132 1.93e-24 104
Msa1092440 AT4G09460.1 46.226 106 55 2 254 357 11 116 2.55e-24 101
Msa1092440 AT1G57560.1 45.918 98 52 1 257 353 14 111 2.58e-24 103
Msa1092440 AT4G01680.3 39.062 128 66 3 257 381 14 132 2.76e-24 101
Msa1092440 AT5G14750.1 42.609 115 63 2 239 352 2 114 3.19e-24 100
Msa1092440 AT3G11440.3 50.000 94 46 1 260 352 46 139 3.21e-24 106
Msa1092440 AT3G11440.4 50.000 94 46 1 260 352 46 139 3.21e-24 106
Msa1092440 AT3G11440.1 50.000 94 46 1 260 352 46 139 3.21e-24 106
Msa1092440 AT1G69560.1 46.939 98 52 0 254 351 104 201 4.79e-24 103
Msa1092440 AT1G69560.2 46.939 98 52 0 254 351 120 217 5.08e-24 103
Msa1092440 AT2G23290.1 48.077 104 54 0 250 353 6 109 6.13e-24 102
Msa1092440 AT1G09540.1 45.918 98 52 1 257 353 14 111 7.25e-24 103
Msa1092440 AT3G13890.2 42.000 100 57 1 257 355 14 113 7.59e-24 103
Msa1092440 AT4G28110.1 47.423 97 50 1 260 355 17 113 7.77e-24 101
Msa1092440 AT4G34990.1 44.915 118 57 3 254 363 11 128 8.85e-24 101
Msa1092440 AT4G01680.2 36.429 140 65 3 257 381 14 144 9.13e-24 102
Msa1092440 AT3G29020.1 47.423 97 51 0 255 351 63 159 9.35e-24 100
Msa1092440 AT1G17950.1 45.361 97 53 0 255 351 3 99 9.53e-24 100
Msa1092440 AT3G29020.2 47.423 97 51 0 255 351 65 161 9.66e-24 101
Msa1092440 AT3G13890.1 39.450 109 56 1 257 355 14 122 9.97e-24 102
Msa1092440 AT5G26660.1 44.000 100 55 1 257 355 14 113 1.02e-23 102
Msa1092440 AT1G26780.1 45.045 111 60 1 260 369 101 211 1.07e-23 100
Msa1092440 AT4G26930.1 46.809 94 49 1 260 352 24 117 1.23e-23 102
Msa1092440 AT1G26780.2 45.045 111 60 1 260 369 101 211 1.59e-23 102
Msa1092440 AT5G16770.1 37.255 153 71 4 260 407 17 149 1.70e-23 101
Msa1092440 AT5G16770.2 37.255 153 71 4 260 407 17 149 1.70e-23 101
Msa1092440 AT5G16770.4 37.255 153 71 4 260 407 17 149 1.72e-23 101
Msa1092440 AT5G16770.3 37.255 153 71 4 260 407 17 149 1.72e-23 101
Msa1092440 AT5G17800.1 46.392 97 52 0 255 351 91 187 2.02e-23 101
Msa1092440 AT3G12720.1 36.025 161 94 5 259 413 26 183 2.10e-23 100
Msa1092440 AT2G26960.1 42.241 116 66 1 256 370 21 136 2.23e-23 102
Msa1092440 AT3G08500.1 46.000 100 53 1 257 355 32 131 2.28e-23 101
Msa1092440 AT5G10280.1 47.872 94 48 1 260 352 17 110 2.40e-23 101
Msa1092440 AT5G40330.1 42.718 103 58 1 251 352 8 110 2.60e-23 98.6
Msa1092440 AT1G63910.1 47.423 97 50 1 257 352 14 110 2.66e-23 101
Msa1092440 AT4G05100.1 47.423 97 50 1 260 355 18 114 4.07e-23 100
Msa1092440 AT5G06100.1 47.872 94 48 1 260 352 37 130 6.89e-23 101
Msa1092440 AT2G16720.1 46.602 103 53 2 257 357 14 116 7.91e-23 98.2
Msa1092440 AT5G55020.1 45.455 99 53 1 260 357 31 129 8.43e-23 101
Msa1092440 AT5G52600.1 44.144 111 58 2 259 368 16 123 8.57e-23 96.3
Msa1092440 AT1G16490.1 45.370 108 55 3 260 364 19 125 1.27e-22 97.8
Msa1092440 AT5G06100.5 47.872 94 48 1 260 352 37 130 1.29e-22 101
Msa1092440 AT5G06100.2 47.872 94 48 1 260 352 37 130 1.29e-22 101
Msa1092440 AT5G06100.3 47.872 94 48 1 260 352 37 130 1.29e-22 101
Msa1092440 AT5G06100.4 47.872 94 48 1 260 352 37 130 1.29e-22 101
Msa1092440 AT3G61250.1 46.809 94 49 1 260 352 17 110 1.30e-22 98.2
Msa1092440 AT3G23250.1 34.270 178 104 7 260 430 17 188 2.05e-22 97.4
Msa1092440 AT2G39880.1 45.833 96 52 0 260 355 53 148 2.05e-22 99.0
Msa1092440 AT2G32460.1 46.392 97 51 1 260 355 23 119 3.78e-22 99.8
Msa1092440 AT2G32460.2 46.392 97 51 1 260 355 11 107 4.04e-22 99.4
Msa1092440 AT1G56160.1 45.745 94 50 1 260 352 19 112 4.13e-22 97.1
Msa1092440 AT5G65230.1 44.118 102 56 1 252 352 9 110 4.36e-22 97.1
Msa1092440 AT3G01530.1 41.525 118 67 2 237 352 6 123 4.49e-22 94.4
Msa1092440 AT1G35515.1 42.718 103 57 2 257 357 14 116 4.72e-22 94.7
Msa1092440 AT4G12350.1 44.681 94 51 1 260 352 17 110 4.74e-22 96.7
Msa1092440 AT3G02940.2 43.810 105 58 1 252 355 9 113 4.80e-22 97.1
Msa1092440 AT3G27920.1 40.708 113 64 2 241 352 2 112 5.20e-22 95.1
Msa1092440 AT1G79180.1 47.368 95 47 2 260 352 19 112 6.46e-22 96.3
Msa1092440 AT3G02940.1 43.810 105 58 1 252 355 9 113 7.29e-22 96.7
Msa1092440 AT3G02940.3 43.810 105 58 1 252 355 9 113 7.29e-22 96.7
Msa1092440 AT5G60890.1 45.631 103 55 1 251 352 8 110 1.00e-21 95.9
Msa1092440 AT4G22680.1 44.118 102 56 1 252 352 9 110 1.04e-21 95.1
Msa1092440 AT1G73410.1 43.636 110 61 1 255 363 4 113 1.21e-21 94.4
Msa1092440 AT1G34670.1 44.681 94 51 1 260 352 17 110 1.31e-21 96.7
Msa1092440 AT1G73410.2 43.636 110 61 1 255 363 4 113 1.57e-21 92.8
Msa1092440 AT4G17785.2 42.268 97 55 1 260 355 18 114 2.03e-21 95.9
Msa1092440 AT5G57620.1 40.833 120 67 3 254 369 11 130 2.24e-21 95.5
Msa1092440 AT4G17785.1 42.000 100 57 1 257 355 15 114 2.26e-21 95.9
Msa1092440 AT5G54230.1 45.745 94 50 1 260 352 17 110 2.54e-21 95.1
Msa1092440 AT1G74430.1 45.263 95 51 1 260 353 17 111 2.88e-21 94.0
Msa1092440 AT3G13540.1 34.783 138 87 2 260 394 28 165 3.40e-21 93.2
Msa1092440 AT1G14350.2 34.000 150 92 3 260 402 28 177 5.56e-21 95.5
Msa1092440 AT1G14350.1 34.000 150 92 3 260 402 28 177 5.56e-21 95.5
Msa1092440 AT5G07690.1 44.118 102 56 1 257 357 14 115 6.21e-21 94.4
Msa1092440 AT1G66230.1 45.263 95 49 2 260 352 17 110 9.86e-21 92.4
Msa1092440 AT1G18570.1 42.308 104 59 1 250 352 8 111 1.68e-20 93.2
Msa1092440 AT5G56110.1 43.000 100 56 1 254 352 11 110 1.88e-20 92.4
Msa1092440 AT3G48920.1 44.898 98 51 2 257 352 20 116 2.26e-20 91.3
Msa1092440 AT1G06180.1 38.261 115 69 2 260 372 17 131 2.42e-20 90.5
Msa1092440 AT5G35550.1 41.071 112 63 2 245 355 6 115 3.15e-20 90.5
Msa1092440 AT5G07700.1 44.330 97 53 1 257 352 14 110 3.23e-20 92.0
Msa1092440 AT5G07700.2 44.330 97 53 1 257 352 14 110 3.23e-20 92.0
Msa1092440 AT5G61420.2 44.330 97 53 1 257 352 14 110 3.90e-20 92.4
Msa1092440 AT5G23000.1 44.898 98 52 2 260 355 17 114 4.01e-20 91.7
Msa1092440 AT1G74080.1 43.299 97 54 1 257 352 14 110 4.95e-20 91.7
Msa1092440 AT2G31180.1 33.548 155 96 3 260 408 17 170 5.12e-20 89.7
Msa1092440 AT5G15310.4 42.553 94 53 1 260 352 17 110 5.13e-20 89.7
Msa1092440 AT3G53200.1 37.681 138 78 4 260 390 14 150 7.25e-20 89.0
Msa1092440 AT2G26950.1 33.835 133 79 2 243 370 4 132 7.33e-20 91.7
Msa1092440 AT5G15310.1 42.553 94 53 1 260 352 17 110 7.74e-20 90.9
Msa1092440 AT4G37780.1 43.158 95 52 2 260 352 17 111 8.12e-20 90.5
Msa1092440 AT2G47190.1 37.719 114 70 1 240 352 5 118 8.42e-20 89.7
Msa1092440 AT5G15310.2 42.553 94 53 1 260 352 17 110 8.52e-20 90.5
Msa1092440 AT3G01140.2 42.553 94 53 1 260 352 17 110 9.64e-20 90.9
Msa1092440 AT3G01140.1 42.553 94 53 1 260 352 60 153 1.43e-19 90.9
Msa1092440 AT1G66370.1 42.553 94 53 1 260 352 13 106 1.74e-19 88.2
Msa1092440 AT5G26660.2 44.318 88 38 1 268 355 6 82 1.83e-19 89.7
Msa1092440 AT5G39700.1 43.011 93 53 0 260 352 59 151 2.22e-19 86.3
Msa1092440 AT2G02820.2 33.161 193 104 6 260 431 33 221 2.56e-19 90.9
Msa1092440 AT3G62610.1 44.330 97 53 1 257 352 14 110 2.59e-19 89.7
Msa1092440 AT2G02820.1 40.367 109 62 2 260 365 33 141 2.83e-19 90.5
Msa1092440 AT5G65790.1 43.119 109 58 3 254 358 11 119 4.08e-19 89.4
Msa1092440 AT5G16600.1 45.263 95 49 2 260 352 17 110 4.27e-19 88.6
Msa1092440 AT4G25560.1 43.299 97 54 1 257 352 12 108 4.78e-19 87.8
Msa1092440 AT2G02820.3 40.367 109 62 2 260 365 33 141 5.45e-19 88.6
Msa1092440 AT5G14750.3 50.794 63 31 0 290 352 18 80 6.62e-19 84.3
Msa1092440 AT5G62470.1 41.935 93 54 0 260 352 17 109 7.65e-19 88.2
Msa1092440 AT3G24310.1 41.489 94 54 1 260 352 23 116 1.14e-18 86.3
Msa1092440 AT5G62320.1 41.739 115 58 3 252 357 10 124 1.41e-18 85.5
Msa1092440 AT5G59780.3 43.299 97 54 1 260 355 13 109 1.67e-18 85.1
Msa1092440 AT3G49690.1 42.574 101 56 2 254 352 11 111 1.74e-18 86.7
Msa1092440 AT3G47600.1 30.000 190 104 4 252 415 9 195 1.76e-18 87.0
Msa1092440 AT3G46130.1 44.330 97 53 1 260 355 14 110 1.99e-18 85.5
Msa1092440 AT3G27810.1 39.216 102 61 1 252 352 17 118 2.04e-18 84.7
Msa1092440 AT5G35550.2 49.351 77 37 1 281 355 42 118 2.11e-18 85.5
Msa1092440 AT1G79180.2 36.496 137 52 4 260 361 19 155 2.38e-18 86.3
Msa1092440 AT3G12820.1 42.553 94 53 1 260 352 19 112 3.07e-18 84.3
Msa1092440 AT4G13480.1 41.489 94 54 1 260 352 11 104 3.37e-18 84.7
Msa1092440 AT2G47460.1 36.585 123 75 2 260 379 17 139 3.56e-18 86.7
Msa1092440 AT3G30210.1 37.963 108 65 2 260 365 32 139 3.63e-18 85.1
Msa1092440 AT1G08810.1 38.356 146 80 5 260 395 17 162 4.53e-18 84.7
Msa1092440 AT3G60460.1 41.000 100 57 2 260 357 16 115 5.27e-18 85.1
Msa1092440 AT5G49330.1 41.489 94 54 1 260 352 17 110 5.90e-18 85.5
Msa1092440 AT2G36890.1 40.708 113 64 3 254 363 11 123 6.24e-18 84.7
Msa1092440 AT1G68320.1 38.739 111 63 2 260 365 24 134 6.35e-18 84.3
Msa1092440 AT5G40350.1 40.426 94 55 1 260 352 22 115 8.30e-18 82.4
Msa1092440 AT1G66380.1 44.330 97 53 1 257 352 10 106 1.32e-17 79.7
Msa1092440 AT2G36890.2 40.708 113 64 3 254 363 52 164 1.36e-17 84.3
Msa1092440 AT1G48000.1 40.426 94 55 1 260 352 37 130 1.74e-17 82.4
Msa1092440 AT5G62470.2 41.489 94 54 1 260 352 17 110 2.03e-17 84.0
Msa1092440 AT1G74650.1 40.196 102 60 1 252 352 9 110 2.40e-17 83.6
Msa1092440 AT5G14340.1 39.362 94 56 1 260 352 29 122 2.44e-17 82.4
Msa1092440 AT3G28910.1 41.584 101 57 2 260 358 17 117 3.04e-17 83.2
Msa1092440 AT1G18710.1 37.895 95 58 1 260 353 17 111 8.42e-17 80.9
Msa1092440 AT5G52260.1 38.261 115 68 2 257 369 14 127 8.72e-17 80.9
Msa1092440 AT1G25340.1 41.489 94 54 1 260 352 23 116 9.01e-17 80.9
Msa1092440 AT3G53200.2 40.566 106 58 2 290 390 12 117 1.03e-16 79.3
Msa1092440 AT3G18100.1 40.625 96 57 0 255 350 544 639 1.63e-16 83.2
Msa1092440 AT3G18100.1 41.346 104 57 3 250 350 486 588 4.88e-16 81.6
Msa1092440 AT3G18100.1 38.739 111 59 4 260 368 445 548 1.37e-12 70.9
Msa1092440 AT3G18100.3 40.625 96 57 0 255 350 496 591 2.46e-16 82.4
Msa1092440 AT3G18100.3 41.346 104 57 3 250 350 438 540 7.73e-16 80.9
Msa1092440 AT3G18100.3 38.739 111 59 4 260 368 397 500 1.99e-12 70.1
Msa1092440 AT3G18100.4 40.625 96 57 0 255 350 383 478 2.69e-16 82.4
Msa1092440 AT3G18100.4 41.346 104 57 3 250 350 325 427 8.78e-16 80.5
Msa1092440 AT3G18100.4 38.739 111 59 4 260 368 284 387 2.60e-12 69.7
Msa1092440 AT1G25340.2 38.182 110 60 2 260 365 23 128 3.19e-16 79.3
Msa1092440 AT3G18100.2 40.625 96 57 0 255 350 331 426 3.92e-16 81.6
Msa1092440 AT3G18100.2 41.346 104 57 3 250 350 273 375 1.27e-15 80.1
Msa1092440 AT3G18100.2 38.739 111 59 4 260 368 232 335 3.82e-12 68.9
Msa1092440 AT1G25340.3 40.860 93 51 1 260 352 23 111 6.17e-16 79.0
Msa1092440 AT3G12820.2 50.794 63 31 0 290 352 2 64 1.17e-15 75.9
Msa1092440 AT1G56650.1 43.299 97 54 1 257 352 10 106 1.20e-15 77.0
Msa1092440 AT3G27810.2 46.032 63 34 0 290 352 7 69 1.39e-15 75.1
Msa1092440 AT1G22640.3 58.621 58 23 1 301 357 2 59 2.29e-15 75.1
Msa1092440 AT5G49620.1 37.500 104 64 1 250 352 21 124 3.02e-15 77.0
Msa1092440 AT5G40350.2 46.032 63 34 0 290 352 8 70 5.23e-15 73.2
Msa1092440 AT1G66390.1 43.299 97 54 1 257 352 10 106 6.21e-15 75.1
Msa1092440 AT3G47600.2 31.126 151 76 3 290 415 42 189 1.96e-14 74.7
Msa1092440 AT3G06490.1 38.000 100 61 1 252 350 16 115 2.53e-14 74.3
Msa1092440 AT5G59780.2 45.455 66 36 0 290 355 23 88 3.53e-14 72.0
Msa1092440 AT3G46130.3 45.455 66 36 0 290 355 13 78 7.52e-14 71.2
Msa1092440 AT3G46130.4 45.455 66 36 0 290 355 23 88 8.36e-14 71.2
Msa1092440 AT1G71030.2 43.939 66 36 1 293 357 5 70 9.41e-14 70.1
Msa1092440 AT1G71030.1 43.939 66 36 1 293 357 19 84 1.10e-13 70.1
Msa1092440 AT2G37630.1 39.362 94 54 1 260 350 7 100 2.54e-13 71.6
Msa1092440 AT5G14750.4 48.077 52 27 0 301 352 2 53 4.03e-13 67.0
Msa1092440 AT5G14750.2 48.077 52 27 0 301 352 2 53 4.03e-13 67.0
Msa1092440 AT1G14350.3 33.929 112 67 3 298 402 23 134 4.57e-13 71.2
Msa1092440 AT1G14350.4 33.929 112 67 3 298 402 23 134 4.57e-13 71.2
Msa1092440 AT1G66380.3 52.381 63 30 0 290 352 11 73 4.91e-13 65.9
Msa1092440 AT3G23250.2 31.852 135 82 5 301 430 2 131 1.06e-12 68.2
Msa1092440 AT1G09770.1 36.957 92 57 1 259 350 9 99 1.73e-12 70.5
Msa1092440 AT5G49620.2 33.051 118 64 2 250 352 21 138 4.77e-12 67.4

Find 112 sgRNAs with CRISPR-Local

Find 173 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATACTGACAAAGGAATT+TGG 0.162282 7_3:-9235111 Msa1092440:CDS
TTGTTTGGTGTAAAGGTTAT+TGG 0.233953 7_3:+9235277 None:intergenic
GGGTATGGCACAATGAATTA+TGG 0.245222 7_3:-9232964 Msa1092440:CDS
AAATTCCTTTGTCAGTATTA+AGG 0.276319 7_3:+9235113 None:intergenic
AAATTTCTTTGCCAGTATTA+AGG 0.278768 7_3:+9235227 None:intergenic
CATGGCTAACCAAGACTTTA+GGG 0.299977 7_3:-9235410 Msa1092440:CDS
CCCACCAATGCAAGAAATAT+TGG 0.311244 7_3:+9234967 None:intergenic
GTGTAAAGGTTATTGGAATT+TGG 0.313633 7_3:+9235284 None:intergenic
TAATACTGACAAAGGAATTT+GGG 0.318492 7_3:-9235110 Msa1092440:CDS
ACATGGCTAACCAAGACTTT+AGG 0.330248 7_3:-9235411 Msa1092440:CDS
CAACAAAATCTCTTTCAATA+TGG 0.332090 7_3:-9235079 Msa1092440:CDS
CGCAATCTGCACTATGTTCA+TGG 0.332854 7_3:+9233149 None:intergenic
CCATCTTCAACCGGACATTA+AGG 0.338665 7_3:-9234488 Msa1092440:intron
ATGTTCCTCTCAAACTATTT+CGG 0.338788 7_3:+9233235 None:intergenic
TTTGTTATTGTTTGGTGTAA+AGG 0.341775 7_3:+9235270 None:intergenic
CTCAAACTATTTCGGCGGTT+TGG 0.351317 7_3:+9233243 None:intergenic
CACCCCTGTATGAAGGGGTT+GGG 0.365445 7_3:+9235344 None:intergenic
AAAATCGCTCTGGGATCTAT+TGG 0.375361 7_3:+9235315 None:intergenic
ATCAAAGCTCACAAGATGAT+TGG 0.378576 7_3:-9233369 Msa1092440:CDS
ATGCATGAACACCTTAATAC+TGG 0.383219 7_3:-9235238 Msa1092440:CDS
TAGTCCTTCATCATTGTGTT+GGG 0.395650 7_3:+9234931 None:intergenic
GCGGTTCTTGATGGAGTTCT+CGG 0.397976 7_3:+9233305 None:intergenic
TTGTAGGAATCTTGTCCAAT+TGG 0.401670 7_3:-9234599 Msa1092440:intron
GGAGTTCCAGCGGTTCTTGA+TGG 0.404645 7_3:+9233296 None:intergenic
TGATCCCAACCCCTTCATAC+AGG 0.428255 7_3:-9235348 Msa1092440:CDS
GGTTGCAAGAGAACCATTGC+GGG 0.430044 7_3:+9235517 None:intergenic
CAAGCCAATATTTCTTGCAT+TGG 0.432718 7_3:-9234971 Msa1092440:CDS
TGGTGAAACTTCACAATCTC+AGG 0.440048 7_3:-9235059 Msa1092440:CDS
GAAATATTGGCTTGAAGCCT+AGG 0.446132 7_3:+9234980 None:intergenic
GCACCCCTGTATGAAGGGGT+TGG 0.463326 7_3:+9235343 None:intergenic
TAGGAATCTTGTCCAATTGG+TGG 0.464780 7_3:-9234596 Msa1092440:CDS
TTAGTCCTTCATCATTGTGT+TGG 0.467760 7_3:+9234930 None:intergenic
GGTATGGCACAATGAATTAT+GGG 0.469170 7_3:-9232963 Msa1092440:CDS
GCCAATATTTCTTGCATTGG+TGG 0.470072 7_3:-9234968 Msa1092440:CDS
CCTTAATGTCCGGTTGAAGA+TGG 0.472965 7_3:+9234488 None:intergenic
CCAATATTTCTTGCATTGGT+GGG 0.474835 7_3:-9234967 Msa1092440:CDS
GGCACAATGAATTATGGGTT+CGG 0.475894 7_3:-9232958 Msa1092440:CDS
TCAAAGCTCACAAGATGATT+GGG 0.477028 7_3:-9233368 Msa1092440:CDS
AGCATTCAGACTGCGCTTAG+TGG 0.477709 7_3:+9233275 None:intergenic
GTGTTTGCACCCCTGTATGA+AGG 0.489842 7_3:+9235337 None:intergenic
GACTATTGATATTCAACAAA+GGG 0.490288 7_3:-9234870 Msa1092440:CDS
GAGATTGCTAAGTTTATGAA+AGG 0.495977 7_3:-9234547 Msa1092440:CDS
ATGGAGTTCTCGGTGCGTCC+AGG 0.496876 7_3:+9233315 None:intergenic
ACCCATCTTTGTTAGTGCCT+AGG 0.499541 7_3:-9234997 Msa1092440:CDS
ACTAGGACCAGGGTTGGTAT+TGG 0.499880 7_3:+9233104 None:intergenic
GGGAGTTCAATACAAGCAAA+AGG 0.501730 7_3:-9234850 Msa1092440:CDS
AATTATGGGTTCGGATCGTA+TGG 0.505058 7_3:-9232949 Msa1092440:CDS
AGCCTAGGCACTAACAAAGA+TGG 0.508071 7_3:+9234995 None:intergenic
TCATCATAAACTACTGATGT+TGG 0.510801 7_3:+9235022 None:intergenic
ATGGTACAACCATCTTCAAC+CGG 0.516159 7_3:-9234497 Msa1092440:CDS
TCAATACAAGCAAAAGGCTA+TGG 0.519597 7_3:-9234844 Msa1092440:CDS
ATGATGCTCAACGGTGATGA+AGG 0.524326 7_3:-9232997 Msa1092440:CDS
AAGTTTATGAAAGGAAGAAT+CGG 0.528877 7_3:-9234538 Msa1092440:CDS
GAAGAATCGGAAAACAGTGC+AGG 0.532629 7_3:-9234525 Msa1092440:CDS
ACTACTGATGTTGGTAGAGA+AGG 0.534133 7_3:+9235031 None:intergenic
TGTTTGCACCCCTGTATGAA+GGG 0.539400 7_3:+9235338 None:intergenic
GAAATTGCAAGTAGACTGCC+TGG 0.545133 7_3:-9233333 Msa1092440:CDS
GATCCCAACCCCTTCATACA+GGG 0.545377 7_3:-9235347 Msa1092440:CDS
GAAGGAATGACCAGTGGGTA+TGG 0.546294 7_3:-9232979 Msa1092440:CDS
GCCTAGGCACTAACAAAGAT+GGG 0.548332 7_3:+9234996 None:intergenic
AATACCCAACACAATGATGA+AGG 0.550572 7_3:-9234935 Msa1092440:CDS
CAATGAACATCCTCTGAACA+TGG 0.553570 7_3:-9235428 Msa1092440:CDS
CAGTAGAAACCCTAAAGTCT+TGG 0.559115 7_3:+9235401 None:intergenic
ATTCATTGTGCCATACCCAC+TGG 0.563453 7_3:+9232969 None:intergenic
GCTGCTCCTGTGGAAGAAGA+TGG 0.564317 7_3:-9233033 Msa1092440:CDS
AACATTACCAATACCAACCC+TGG 0.565873 7_3:-9233111 Msa1092440:CDS
ACAAGATGATTGGGAACAAG+TGG 0.567686 7_3:-9233359 Msa1092440:CDS
CTATGCGGAGAATGTTCAAA+GGG 0.567743 7_3:-9233184 Msa1092440:CDS
TAGCCACCATCTTCTTCCAC+AGG 0.568426 7_3:+9233027 None:intergenic
AAAATTTGGGCTCAATAACT+GGG 0.569139 7_3:-9234572 Msa1092440:CDS
GAAAACAGTGCAGGGAGAGA+TGG 0.569754 7_3:-9234516 Msa1092440:CDS
CAACAAAATCTCTTTCAACA+TGG 0.572197 7_3:-9235193 Msa1092440:CDS
TATGGACTTCAGATGAGGAT+AGG 0.575612 7_3:-9234826 Msa1092440:intron
AGAACTCCATCAAGAACCGC+TGG 0.579591 7_3:-9233302 Msa1092440:CDS
TGAAGGTTTCGCTGCTCCTG+TGG 0.580714 7_3:-9233043 Msa1092440:CDS
TGTGATTGTAGAAGGATACA+TGG 0.582147 7_3:-9233416 Msa1092440:intron
CCTTTGAACATTCTCCGCAT+AGG 0.584715 7_3:+9233185 None:intergenic
TGCGCTTAGTGGAGTTCCAG+CGG 0.585896 7_3:+9233286 None:intergenic
TGGGTTCGGATCGTATGGAA+TGG 0.589906 7_3:-9232944 Msa1092440:CDS
AACTACTGATGTTGATAGAG+AGG 0.592028 7_3:+9235144 None:intergenic
AACCCTGGTCCTAGTCATGT+TGG 0.596471 7_3:-9233096 Msa1092440:CDS
AACATGACTAGGACCAGGGT+TGG 0.597563 7_3:+9233098 None:intergenic
ACTTCATAACCAACATGACT+AGG 0.602220 7_3:+9233087 None:intergenic
GAACGCCTTAATACTGACAA+AGG 0.605609 7_3:-9235118 Msa1092440:CDS
AGACTATTGATATTCAACAA+AGG 0.610503 7_3:-9234871 Msa1092440:CDS
TAACCAACATGACTAGGACC+AGG 0.610691 7_3:+9233093 None:intergenic
AACCGCCGAAATAGTTTGAG+AGG 0.614124 7_3:-9233240 Msa1092440:CDS
AAGAATCGGAAAACAGTGCA+GGG 0.615291 7_3:-9234524 Msa1092440:CDS
TCTTGGTTAGCCATGTTCAG+AGG 0.617854 7_3:+9235418 None:intergenic
TTCCTCTCAAACTATTTCGG+CGG 0.620812 7_3:+9233238 None:intergenic
ACTACTGATGTTGATAGAGA+GGG 0.621646 7_3:+9235145 None:intergenic
AACCAACATGACTAGGACCA+GGG 0.623604 7_3:+9233094 None:intergenic
GAAAATTCGTTGATATACGA+AGG 0.624664 7_3:+9235373 None:intergenic
GGTTATGAAGTTGCAAACAA+TGG 0.625006 7_3:-9233075 Msa1092440:CDS
AAAATCAGAGATCCCCGCAA+TGG 0.625636 7_3:-9235530 Msa1092440:CDS
GCAGTCTGAATGCTACAAGT+AGG 0.628497 7_3:-9233266 Msa1092440:CDS
CCTATGCGGAGAATGTTCAA+AGG 0.628871 7_3:-9233185 Msa1092440:CDS
GTAGGTGAAATAGTAGAACT+TGG 0.636823 7_3:+9235496 None:intergenic
TGGTTGCAAGAGAACCATTG+CGG 0.637065 7_3:+9235516 None:intergenic
CAAGATGATTGGGAACAAGT+GGG 0.643131 7_3:-9233358 Msa1092440:CDS
GAAGGATACATGGAGCGAAG+AGG 0.648775 7_3:-9233406 Msa1092440:CDS
GTTTGCACCCCTGTATGAAG+GGG 0.650629 7_3:+9235339 None:intergenic
AAGGCTATGGACTTCAGATG+AGG 0.659211 7_3:-9234831 Msa1092440:CDS
ATCCCAACCCCTTCATACAG+GGG 0.667776 7_3:-9235346 Msa1092440:CDS
TTCTATAGATTATCTCCATG+AGG 0.671451 7_3:+9232901 None:intergenic
GTGATGAAGGAATGACCAGT+GGG 0.678371 7_3:-9232984 Msa1092440:CDS
CTGGTGTAATGTGATGGTGT+AGG 0.684642 7_3:+9235478 None:intergenic
GTTGCAAGAGAACCATTGCG+GGG 0.691957 7_3:+9235518 None:intergenic
GCTCCTGTGGAAGAAGATGG+TGG 0.696486 7_3:-9233030 Msa1092440:CDS
GGTGATGAAGGAATGACCAG+TGG 0.697218 7_3:-9232985 Msa1092440:CDS
TATGCAGCAATGATGCTCAA+CGG 0.720991 7_3:-9233006 Msa1092440:CDS
CATTAGCGAAATCACCTATG+CGG 0.726829 7_3:-9233199 Msa1092440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTAAAA+AGG + chr7_3:9234044-9234063 None:intergenic 0.0%
!!! ATTTTAAGAAAAGTAAAATA+TGG + chr7_3:9234553-9234572 None:intergenic 10.0%
!! AATTAACTAAAATAAGAAAT+TGG + chr7_3:9234688-9234707 None:intergenic 10.0%
!!! AATTCATTTTTGTTATTGTT+TGG + chr7_3:9233245-9233264 None:intergenic 15.0%
!! GTTTAATTATCACATTATAT+TGG - chr7_3:9234290-9234309 Msa1092440:intron 15.0%
!!! CTATTTTTCTGAATAAATAT+TGG - chr7_3:9234357-9234376 Msa1092440:intron 15.0%
!! AAATTTATAAACAATGTTCT+AGG - chr7_3:9234383-9234402 Msa1092440:intron 15.0%
!!! GAAATTTTTTCTGAAAAACT+AGG + chr7_3:9232918-9232937 None:intergenic 20.0%
!! GAAAAAATTTCTTATCTCTT+AGG - chr7_3:9232927-9232946 Msa1092440:CDS 20.0%
!!! ATATTGAAAGAGATTTTGTT+GGG + chr7_3:9233426-9233445 None:intergenic 20.0%
!! AACTAAAACCATGAAAATAT+TGG + chr7_3:9233742-9233761 None:intergenic 20.0%
!!! ATATTTTCATGGTTTTAGTT+TGG - chr7_3:9233742-9233761 Msa1092440:intron 20.0%
!!! ATTAGTTCAAGTTATGTTTA+AGG - chr7_3:9233781-9233800 Msa1092440:intron 20.0%
!!! TTAGTTCAAGTTATGTTTAA+GGG - chr7_3:9233782-9233801 Msa1092440:intron 20.0%
!!! TGATAATTAATTGCTTTGAA+TGG + chr7_3:9234185-9234204 None:intergenic 20.0%
!! ACATAATATTGAGATAAGTT+TGG - chr7_3:9234642-9234661 Msa1092440:intron 20.0%
!! ACTAAAATAAGAAATTGGTA+AGG + chr7_3:9234683-9234702 None:intergenic 20.0%
!!! TTCAATTACCATTTTTGAAA+TGG - chr7_3:9235005-9235024 Msa1092440:CDS 20.0%
!!! TCAATTACCATTTTTGAAAT+GGG - chr7_3:9235006-9235025 Msa1092440:CDS 20.0%
!! GATTTTTCTTGAGGAATTTT+AGG + chr7_3:9232960-9232979 None:intergenic 25.0%
!!! TTTGTTATTGTTTGGTGTAA+AGG + chr7_3:9233237-9233256 None:intergenic 25.0%
! AAATTTCTTTGCCAGTATTA+AGG + chr7_3:9233280-9233299 None:intergenic 25.0%
!! ATGTTGAAAGAGATTTTGTT+GGG + chr7_3:9233312-9233331 None:intergenic 25.0%
! AAATTCCTTTGTCAGTATTA+AGG + chr7_3:9233394-9233413 None:intergenic 25.0%
! TTAATACTGACAAAGGAATT+TGG - chr7_3:9233393-9233412 Msa1092440:CDS 25.0%
! TAATACTGACAAAGGAATTT+GGG - chr7_3:9233394-9233413 Msa1092440:CDS 25.0%
!! CATATTGAAAGAGATTTTGT+TGG + chr7_3:9233427-9233446 None:intergenic 25.0%
! CAACAAAATCTCTTTCAATA+TGG - chr7_3:9233425-9233444 Msa1092440:intron 25.0%
! AGACTATTGATATTCAACAA+AGG - chr7_3:9233633-9233652 Msa1092440:intron 25.0%
! GACTATTGATATTCAACAAA+GGG - chr7_3:9233634-9233653 Msa1092440:intron 25.0%
! AAGTTTATGAAAGGAAGAAT+CGG - chr7_3:9233966-9233985 Msa1092440:intron 25.0%
!!! TGTCGTTTGCATTTTTAAAA+TGG + chr7_3:9234492-9234511 None:intergenic 25.0%
!! GAATAAAGCATTCATACATA+TGG + chr7_3:9234589-9234608 None:intergenic 25.0%
! TTTGAACAAATAGATACTTC+AGG - chr7_3:9234707-9234726 Msa1092440:intron 25.0%
! ATTAAAACAACCTACATGAA+AGG + chr7_3:9234758-9234777 None:intergenic 25.0%
! TTGTTTGGTAAGAATTAGTT+TGG + chr7_3:9234849-9234868 None:intergenic 25.0%
!!! ATAAAAGAGCATAGTTTGTT+TGG + chr7_3:9234864-9234883 None:intergenic 25.0%
!!! CAATTACCATTTTTGAAATG+GGG - chr7_3:9235007-9235026 Msa1092440:CDS 25.0%
AAAAAACTGGTGTAATGTGA+TGG + chr7_3:9233035-9233054 None:intergenic 30.0%
GCTTTGATTGTACAAAAAAC+TGG + chr7_3:9233048-9233067 None:intergenic 30.0%
GAAAATTCGTTGATATACGA+AGG + chr7_3:9233134-9233153 None:intergenic 30.0%
GTGTAAAGGTTATTGGAATT+TGG + chr7_3:9233223-9233242 None:intergenic 30.0%
!! TTGTTTGGTGTAAAGGTTAT+TGG + chr7_3:9233230-9233249 None:intergenic 30.0%
! CATGTTGAAAGAGATTTTGT+TGG + chr7_3:9233313-9233332 None:intergenic 30.0%
CAACAAAATCTCTTTCAACA+TGG - chr7_3:9233311-9233330 Msa1092440:CDS 30.0%
TCATCATAAACTACTGATGT+TGG + chr7_3:9233485-9233504 None:intergenic 30.0%
! TCTGCTATCCAATATTTTCA+TGG - chr7_3:9233731-9233750 Msa1092440:intron 30.0%
TCCAATTGGTGGAAAAATTT+GGG - chr7_3:9233919-9233938 Msa1092440:intron 30.0%
AAAAATTTGGGCTCAATAAC+TGG - chr7_3:9233931-9233950 Msa1092440:intron 30.0%
AAAATTTGGGCTCAATAACT+GGG - chr7_3:9233932-9233951 Msa1092440:intron 30.0%
GAGATTGCTAAGTTTATGAA+AGG - chr7_3:9233957-9233976 Msa1092440:intron 30.0%
GTAAGGGATAAAAGCTAAAA+AGG + chr7_3:9234072-9234091 None:intergenic 30.0%
CATTCTAAGTGTATGTGTAA+GGG + chr7_3:9234088-9234107 None:intergenic 30.0%
GTACATATAGATGCATCAAA+TGG - chr7_3:9234132-9234151 Msa1092440:intron 30.0%
!!! CGTTTGCATTTTTAAAATGG+TGG + chr7_3:9234489-9234508 None:intergenic 30.0%
! TTACACTTTTCCTTTCATGT+AGG - chr7_3:9234745-9234764 Msa1092440:intron 30.0%
TGTATACATCAATTGTGATC+TGG - chr7_3:9234963-9234982 Msa1092440:CDS 30.0%
GTATACATCAATTGTGATCT+GGG - chr7_3:9234964-9234983 Msa1092440:CDS 30.0%
CACAACAAACAATATATGTG+TGG + chr7_3:9235072-9235091 None:intergenic 30.0%
!! TTGTTTGTTGTGATTGTAGA+AGG - chr7_3:9235080-9235099 Msa1092440:CDS 30.0%
ATGTTCCTCTCAAACTATTT+CGG + chr7_3:9235272-9235291 None:intergenic 30.0%
GTAGGTGAAATAGTAGAACT+TGG + chr7_3:9233011-9233030 None:intergenic 35.0%
ATGCATGAACACCTTAATAC+TGG - chr7_3:9233266-9233285 Msa1092440:CDS 35.0%
! ACTACTGATGTTGATAGAGA+GGG + chr7_3:9233362-9233381 None:intergenic 35.0%
! AACTACTGATGTTGATAGAG+AGG + chr7_3:9233363-9233382 None:intergenic 35.0%
CAAGCCAATATTTCTTGCAT+TGG - chr7_3:9233533-9233552 Msa1092440:intron 35.0%
! CCAATATTTCTTGCATTGGT+GGG - chr7_3:9233537-9233556 Msa1092440:intron 35.0%
AATACCCAACACAATGATGA+AGG - chr7_3:9233569-9233588 Msa1092440:intron 35.0%
TAGTCCTTCATCATTGTGTT+GGG + chr7_3:9233576-9233595 None:intergenic 35.0%
TTAGTCCTTCATCATTGTGT+TGG + chr7_3:9233577-9233596 None:intergenic 35.0%
!! TTTTGACGCTTTTGGTTGTT+GGG + chr7_3:9233602-9233621 None:intergenic 35.0%
!! TTTTTGACGCTTTTGGTTGT+TGG + chr7_3:9233603-9233622 None:intergenic 35.0%
!! ACAACCAAAAGCGTCAAAAA+AGG - chr7_3:9233603-9233622 Msa1092440:intron 35.0%
!! CAACCAAAAGCGTCAAAAAA+GGG - chr7_3:9233604-9233623 Msa1092440:intron 35.0%
TCAATACAAGCAAAAGGCTA+TGG - chr7_3:9233660-9233679 Msa1092440:intron 35.0%
TTGTAGGAATCTTGTCCAAT+TGG - chr7_3:9233905-9233924 Msa1092440:intron 35.0%
GTCCAATTGGTGGAAAAATT+TGG - chr7_3:9233918-9233937 Msa1092440:intron 35.0%
!! TAAAAAGGCACCTTAATGTC+CGG + chr7_3:9234029-9234048 None:intergenic 35.0%
GCATTCTAAGTGTATGTGTA+AGG + chr7_3:9234089-9234108 None:intergenic 35.0%
GAAGATCCCCATTTCAAAAA+TGG + chr7_3:9235016-9235035 None:intergenic 35.0%
TGTGATTGTAGAAGGATACA+TGG - chr7_3:9235088-9235107 Msa1092440:CDS 35.0%
ATCAAAGCTCACAAGATGAT+TGG - chr7_3:9235135-9235154 Msa1092440:CDS 35.0%
TCAAAGCTCACAAGATGATT+GGG - chr7_3:9235136-9235155 Msa1092440:CDS 35.0%
ACTTCATAACCAACATGACT+AGG + chr7_3:9235420-9235439 None:intergenic 35.0%
GGTTATGAAGTTGCAAACAA+TGG - chr7_3:9235429-9235448 Msa1092440:CDS 35.0%
!!! AACAATGGTTTTAGCTCTGA+AGG - chr7_3:9235444-9235463 Msa1092440:CDS 35.0%
GGTATGGCACAATGAATTAT+GGG - chr7_3:9235541-9235560 Msa1092440:CDS 35.0%
! TTTCCTGAGTTTTTACCTCA+TGG - chr7_3:9235588-9235607 Msa1092440:CDS 35.0%
! GGGATCTCTGATTTTTCTTG+AGG + chr7_3:9232969-9232988 None:intergenic 40.0%
CAATGAACATCCTCTGAACA+TGG - chr7_3:9233076-9233095 Msa1092440:CDS 40.0%
ACATGGCTAACCAAGACTTT+AGG - chr7_3:9233093-9233112 Msa1092440:CDS 40.0%
CATGGCTAACCAAGACTTTA+GGG - chr7_3:9233094-9233113 Msa1092440:CDS 40.0%
CAGTAGAAACCCTAAAGTCT+TGG + chr7_3:9233106-9233125 None:intergenic 40.0%
!! AAAATCGCTCTGGGATCTAT+TGG + chr7_3:9233192-9233211 None:intergenic 40.0%
GTCGTTGAAAAAATCGCTCT+GGG + chr7_3:9233201-9233220 None:intergenic 40.0%
GAACGCCTTAATACTGACAA+AGG - chr7_3:9233386-9233405 Msa1092440:CDS 40.0%
TGGTGAAACTTCACAATCTC+AGG - chr7_3:9233445-9233464 Msa1092440:intron 40.0%
! ACTACTGATGTTGGTAGAGA+AGG + chr7_3:9233476-9233495 None:intergenic 40.0%
!! GAAATATTGGCTTGAAGCCT+AGG + chr7_3:9233527-9233546 None:intergenic 40.0%
GCCAATATTTCTTGCATTGG+TGG - chr7_3:9233536-9233555 Msa1092440:intron 40.0%
CCCACCAATGCAAGAAATAT+TGG + chr7_3:9233540-9233559 None:intergenic 40.0%
!! TTTGACGCTTTTGGTTGTTG+GGG + chr7_3:9233601-9233620 None:intergenic 40.0%
!!! CAACCCTTTTTTGACGCTTT+TGG + chr7_3:9233610-9233629 None:intergenic 40.0%
GGGAGTTCAATACAAGCAAA+AGG - chr7_3:9233654-9233673 Msa1092440:intron 40.0%
TATGGACTTCAGATGAGGAT+AGG - chr7_3:9233678-9233697 Msa1092440:intron 40.0%
TAGGAATCTTGTCCAATTGG+TGG - chr7_3:9233908-9233927 Msa1092440:intron 40.0%
! GCCCAAATTTTTCCACCAAT+TGG + chr7_3:9233923-9233942 None:intergenic 40.0%
AAGAATCGGAAAACAGTGCA+GGG - chr7_3:9233980-9233999 Msa1092440:intron 40.0%
ATGGTACAACCATCTTCAAC+CGG - chr7_3:9234007-9234026 Msa1092440:intron 40.0%
ACAAGATGATTGGGAACAAG+TGG - chr7_3:9235145-9235164 Msa1092440:CDS 40.0%
CAAGATGATTGGGAACAAGT+GGG - chr7_3:9235146-9235165 Msa1092440:CDS 40.0%
TTCCTCTCAAACTATTTCGG+CGG + chr7_3:9235269-9235288 None:intergenic 40.0%
CATTAGCGAAATCACCTATG+CGG - chr7_3:9235305-9235324 Msa1092440:CDS 40.0%
CTATGCGGAGAATGTTCAAA+GGG - chr7_3:9235320-9235339 Msa1092440:CDS 40.0%
AACATTACCAATACCAACCC+TGG - chr7_3:9235393-9235412 Msa1092440:CDS 40.0%
TATGCAGCAATGATGCTCAA+CGG - chr7_3:9235498-9235517 Msa1092440:CDS 40.0%
GGGTATGGCACAATGAATTA+TGG - chr7_3:9235540-9235559 Msa1092440:CDS 40.0%
GGCACAATGAATTATGGGTT+CGG - chr7_3:9235546-9235565 Msa1092440:CDS 40.0%
AATTATGGGTTCGGATCGTA+TGG - chr7_3:9235555-9235574 Msa1092440:CDS 40.0%
TCTCCATGAGGTAAAAACTC+AGG + chr7_3:9235594-9235613 None:intergenic 40.0%
AAAATCAGAGATCCCCGCAA+TGG - chr7_3:9232974-9232993 Msa1092440:CDS 45.0%
TGGTTGCAAGAGAACCATTG+CGG + chr7_3:9232991-9233010 None:intergenic 45.0%
! CTGGTGTAATGTGATGGTGT+AGG + chr7_3:9233029-9233048 None:intergenic 45.0%
! TCTTGGTTAGCCATGTTCAG+AGG + chr7_3:9233089-9233108 None:intergenic 45.0%
TGTTTGCACCCCTGTATGAA+GGG + chr7_3:9233169-9233188 None:intergenic 45.0%
GGTCGTTGAAAAAATCGCTC+TGG + chr7_3:9233202-9233221 None:intergenic 45.0%
ACCCATCTTTGTTAGTGCCT+AGG - chr7_3:9233507-9233526 Msa1092440:intron 45.0%
GCCTAGGCACTAACAAAGAT+GGG + chr7_3:9233511-9233530 None:intergenic 45.0%
AGCCTAGGCACTAACAAAGA+TGG + chr7_3:9233512-9233531 None:intergenic 45.0%
AAGGCTATGGACTTCAGATG+AGG - chr7_3:9233673-9233692 Msa1092440:intron 45.0%
GAAGAATCGGAAAACAGTGC+AGG - chr7_3:9233979-9233998 Msa1092440:intron 45.0%
CCTTAATGTCCGGTTGAAGA+TGG + chr7_3:9234019-9234038 None:intergenic 45.0%
CCATCTTCAACCGGACATTA+AGG - chr7_3:9234016-9234035 Msa1092440:intron 45.0%
GAAATTGCAAGTAGACTGCC+TGG - chr7_3:9235171-9235190 Msa1092440:CDS 45.0%
GCAGTCTGAATGCTACAAGT+AGG - chr7_3:9235238-9235257 Msa1092440:CDS 45.0%
CTCAAACTATTTCGGCGGTT+TGG + chr7_3:9235264-9235283 None:intergenic 45.0%
AACCGCCGAAATAGTTTGAG+AGG - chr7_3:9235264-9235283 Msa1092440:CDS 45.0%
CCTTTGAACATTCTCCGCAT+AGG + chr7_3:9235322-9235341 None:intergenic 45.0%
CCTATGCGGAGAATGTTCAA+AGG - chr7_3:9235319-9235338 Msa1092440:CDS 45.0%
CGCAATCTGCACTATGTTCA+TGG + chr7_3:9235358-9235377 None:intergenic 45.0%
AACCAACATGACTAGGACCA+GGG + chr7_3:9235413-9235432 None:intergenic 45.0%
TAACCAACATGACTAGGACC+AGG + chr7_3:9235414-9235433 None:intergenic 45.0%
ATGATGCTCAACGGTGATGA+AGG - chr7_3:9235507-9235526 Msa1092440:CDS 45.0%
GTGATGAAGGAATGACCAGT+GGG - chr7_3:9235520-9235539 Msa1092440:CDS 45.0%
ATTCATTGTGCCATACCCAC+TGG + chr7_3:9235538-9235557 None:intergenic 45.0%
!!! TAAAATTTTATATTTTTTGT+AGG - chr7_3:9233889-9233908 Msa1092440:intron 5.0%
GTTGCAAGAGAACCATTGCG+GGG + chr7_3:9232989-9233008 None:intergenic 50.0%
GGTTGCAAGAGAACCATTGC+GGG + chr7_3:9232990-9233009 None:intergenic 50.0%
TGATCCCAACCCCTTCATAC+AGG - chr7_3:9233156-9233175 Msa1092440:CDS 50.0%
GATCCCAACCCCTTCATACA+GGG - chr7_3:9233157-9233176 Msa1092440:CDS 50.0%
ATCCCAACCCCTTCATACAG+GGG - chr7_3:9233158-9233177 Msa1092440:CDS 50.0%
GTTTGCACCCCTGTATGAAG+GGG + chr7_3:9233168-9233187 None:intergenic 50.0%
GTGTTTGCACCCCTGTATGA+AGG + chr7_3:9233170-9233189 None:intergenic 50.0%
GAAAACAGTGCAGGGAGAGA+TGG - chr7_3:9233988-9234007 Msa1092440:intron 50.0%
GAAGGATACATGGAGCGAAG+AGG - chr7_3:9235098-9235117 Msa1092440:CDS 50.0%
GCGGTTCTTGATGGAGTTCT+CGG + chr7_3:9235202-9235221 None:intergenic 50.0%
AGAACTCCATCAAGAACCGC+TGG - chr7_3:9235202-9235221 Msa1092440:CDS 50.0%
AGCATTCAGACTGCGCTTAG+TGG + chr7_3:9235232-9235251 None:intergenic 50.0%
!! ACTAGGACCAGGGTTGGTAT+TGG + chr7_3:9235403-9235422 None:intergenic 50.0%
AACATGACTAGGACCAGGGT+TGG + chr7_3:9235409-9235428 None:intergenic 50.0%
AACCCTGGTCCTAGTCATGT+TGG - chr7_3:9235408-9235427 Msa1092440:CDS 50.0%
TAGCCACCATCTTCTTCCAC+AGG + chr7_3:9235480-9235499 None:intergenic 50.0%
GGTGATGAAGGAATGACCAG+TGG - chr7_3:9235519-9235538 Msa1092440:CDS 50.0%
GAAGGAATGACCAGTGGGTA+TGG - chr7_3:9235525-9235544 Msa1092440:CDS 50.0%
TGGGTTCGGATCGTATGGAA+TGG - chr7_3:9235560-9235579 Msa1092440:CDS 50.0%
CACCCCTGTATGAAGGGGTT+GGG + chr7_3:9233163-9233182 None:intergenic 55.0%
GGAGTTCCAGCGGTTCTTGA+TGG + chr7_3:9235211-9235230 None:intergenic 55.0%
TGCGCTTAGTGGAGTTCCAG+CGG + chr7_3:9235221-9235240 None:intergenic 55.0%
TGAAGGTTTCGCTGCTCCTG+TGG - chr7_3:9235461-9235480 Msa1092440:CDS 55.0%
GCTGCTCCTGTGGAAGAAGA+TGG - chr7_3:9235471-9235490 Msa1092440:CDS 55.0%
GCTCCTGTGGAAGAAGATGG+TGG - chr7_3:9235474-9235493 Msa1092440:CDS 55.0%
GCACCCCTGTATGAAGGGGT+TGG + chr7_3:9233164-9233183 None:intergenic 60.0%
! ATGGAGTTCTCGGTGCGTCC+AGG + chr7_3:9235192-9235211 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 9232903 9235623 9232903 ID=Msa1092440;Name=Msa1092440
chr7_3 mRNA 9232903 9235623 9232903 ID=Msa1092440-mRNA-1;Parent=Msa1092440;Name=Msa1092440-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|3|0|482
chr7_3 exon 9234827 9235623 9234827 ID=Msa1092440-mRNA-1:exon:2630;Parent=Msa1092440-mRNA-1
chr7_3 exon 9234489 9234615 9234489 ID=Msa1092440-mRNA-1:exon:2629;Parent=Msa1092440-mRNA-1
chr7_3 exon 9232903 9233427 9232903 ID=Msa1092440-mRNA-1:exon:2628;Parent=Msa1092440-mRNA-1
chr7_3 CDS 9234827 9235623 9234827 ID=Msa1092440-mRNA-1:cds;Parent=Msa1092440-mRNA-1
chr7_3 CDS 9234489 9234615 9234489 ID=Msa1092440-mRNA-1:cds;Parent=Msa1092440-mRNA-1
chr7_3 CDS 9232903 9233427 9232903 ID=Msa1092440-mRNA-1:cds;Parent=Msa1092440-mRNA-1
Gene Sequence

>Msa1092440

ATGGAATTAGATCCTAGTTTTTCAGAAAAAATTTCTTATCTCTTAGGAGATTTTCCTAAAATTCCTCAAGAAAAATCAGAGATCCCCGCAATGGTTCTCTTGCAACCAAGTTCTACTATTTCACCTACACCATCACATTACACCAGTTTTTTGTACAATCAAAGCAGTCAATTCAATGAACATCCTCTGAACATGGCTAACCAAGACTTTAGGGTTTCTACTGTAGTTCCTTCGTATATCAACGAATTTTCTATGATCCCAACCCCTTCATACAGGGGTGCAAACACCAATAGATCCCAGAGCGATTTTTTCAACGACCAAATTCCAATAACCTTTACACCAAACAATAACAAAAATGAATTTATGCATGAACACCTTAATACTGGCAAAGAAATTTGTGATTTTTCCCAACAAAATCTCTTTCAACATGGTCAAACTTCACAATCTCATTTCAGTCCCTCTCTATCAACATCAGTAGTTTATGAACGCCTTAATACTGACAAAGGAATTTGGGATTTCTCCCAACAAAATCTCTTTCAATATGGTGAAACTTCACAATCTCAGGTCAGTCCTTCTCTACCAACATCAGTAGTTTATGATGAAAACCCATCTTTGTTAGTGCCTAGGCTTCAAGCCAATATTTCTTGCATTGGTGGGTTTGAAAACAATACCCAACACAATGATGAAGGACTAATCCCCAACAACCAAAAGCGTCAAAAAAGGGTTGATAAGACTATTGATATTCAACAAAGGGAGTTCAATACAAGCAAAAGGCTATGGACTTCAGATGAGGATAGGAATCTTGTCCAATTGGTGGAAAAATTTGGGCTCAATAACTGGGTAGAGATTGCTAAGTTTATGAAAGGAAGAATCGGAAAACAGTGCAGGGAGAGATGGTACAACCATCTTCAACCGGACATTAAGAAGGATACATGGAGCGAAGAGGAAGACATATTATTGATCAAAGCTCACAAGATGATTGGGAACAAGTGGGCTGAAATTGCAAGTAGACTGCCTGGACGCACCGAGAACTCCATCAAGAACCGCTGGAACTCCACTAAGCGCAGTCTGAATGCTACAAGTAGGCCAAACCGCCGAAATAGTTTGAGAGGAACATTACTTCATAATTACATTAGCGAAATCACCTATGCGGAGAATGTTCAAAGGGAGCTGACTAATTCCATGAACATAGTGCAGATTGCGAATCAGACAAATTTCAACATTACCAATACCAACCCTGGTCCTAGTCATGTTGGTTATGAAGTTGCAAACAATGGTTTTAGCTCTGAAGGTTTCGCTGCTCCTGTGGAAGAAGATGGTGGCTATGCAGCAATGATGCTCAACGGTGATGAAGGAATGACCAGTGGGTATGGCACAATGAATTATGGGTTCGGATCGTATGGAATGGAGTTTTTTCCTGAGTTTTTACCTCATGGAGATAATCTATAG
Protein sequence

>Msa1092440

MELDPSFSEKISYLLGDFPKIPQEKSEIPAMVLLQPSSTISPTPSHYTSFLYNQSSQFNEHPLNMANQDFRVSTVVPSYINEFSMIPTPSYRGANTNRSQSDFFNDQIPITFTPNNNKNEFMHEHLNTGKEICDFSQQNLFQHGQTSQSHFSPSLSTSVVYERLNTDKGIWDFSQQNLFQYGETSQSQVSPSLPTSVVYDENPSLLVPRLQANISCIGGFENNTQHNDEGLIPNNQKRQKRVDKTIDIQQREFNTSKRLWTSDEDRNLVQLVEKFGLNNWVEIAKFMKGRIGKQCRERWYNHLQPDIKKDTWSEEEDILLIKAHKMIGNKWAEIASRLPGRTENSIKNRWNSTKRSLNATSRPNRRNSLRGTLLHNYISEITYAENVQRELTNSMNIVQIANQTNFNITNTNPGPSHVGYEVANNGFSSEGFAAPVEEDGGYAAMMLNGDEGMTSGYGTMNYGFGSYGMEFFPEFLPHGDNL*