AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1092830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1092830 MtrunA17_Chr7g0228231 98.077 208 3 1 1 207 1 208 1.09e-150 416
Msa1092830 MtrunA17_Chr6g0450101 74.654 217 37 6 1 207 1 209 5.03e-106 303
Msa1092830 MtrunA17_Chr1g0209661 75.630 119 28 1 3 120 15 133 2.39e-65 204
Msa1092830 MtrunA17_Chr1g0194291 64.662 133 47 0 1 133 8 140 1.45e-60 190
Msa1092830 MtrunA17_Chr2g0293911 76.000 125 30 0 8 132 18 142 9.71e-60 190
Msa1092830 MtrunA17_Chr4g0068921 73.810 126 33 0 7 132 17 142 1.32e-58 182
Msa1092830 MtrunA17_Chr1g0194301 68.067 119 38 0 14 132 33 151 2.22e-58 185
Msa1092830 MtrunA17_Chr1g0186061 67.619 105 34 0 15 119 21 125 6.57e-50 162
Msa1092830 MtrunA17_Chr1g0168661 54.422 147 44 2 15 138 22 168 3.65e-48 158
Msa1092830 MtrunA17_Chr7g0275911 60.656 122 46 1 1 122 1 120 1.16e-46 154
Msa1092830 MtrunA17_Chr5g0410961 66.667 105 35 0 14 118 12 116 3.46e-46 155
Msa1092830 MtrunA17_Chr4g0068061 66.667 105 35 0 14 118 12 116 3.88e-46 155
Msa1092830 MtrunA17_Chr8g0346561 57.364 129 49 1 14 142 12 134 6.27e-46 154
Msa1092830 MtrunA17_Chr2g0327821 55.462 119 47 1 13 131 5 117 8.80e-46 151
Msa1092830 MtrunA17_Chr8g0387421 43.939 198 97 4 1 189 1 193 9.53e-46 154
Msa1092830 MtrunA17_Chr2g0330041 59.483 116 45 1 1 116 1 114 1.23e-45 155
Msa1092830 MtrunA17_Chr4g0039971 63.551 107 39 0 14 120 13 119 1.93e-45 154
Msa1092830 MtrunA17_Chr2g0323411 62.963 108 40 0 14 121 12 119 3.42e-45 152
Msa1092830 MtrunA17_Chr8g0385321 61.017 118 44 1 1 118 1 116 8.10e-45 151
Msa1092830 MtrunA17_Chr4g0032401 44.385 187 88 4 14 192 17 195 1.09e-44 151
Msa1092830 MtrunA17_Chr1g0203411 56.198 121 51 1 1 121 1 119 1.60e-44 150
Msa1092830 MtrunA17_Chr1g0187761 51.471 136 66 0 14 149 12 147 1.67e-44 149
Msa1092830 MtrunA17_Chr5g0395281 58.407 113 47 0 8 120 6 118 3.50e-44 149
Msa1092830 MtrunA17_Chr4g0037141 49.057 159 67 2 16 161 14 171 4.27e-44 148
Msa1092830 MtrunA17_Chr3g0099131 42.857 182 94 2 13 184 40 221 4.34e-44 154
Msa1092830 MtrunA17_Chr1g0180391 60.748 107 42 0 13 119 18 124 4.46e-44 147
Msa1092830 MtrunA17_Chr4g0070641 58.824 119 47 1 1 119 1 117 4.57e-44 145
Msa1092830 MtrunA17_Chr4g0070611 58.824 119 47 1 1 119 1 117 4.64e-44 149
Msa1092830 MtrunA17_Chr3g0131121 60.169 118 45 1 1 118 1 116 8.13e-44 148
Msa1092830 MtrunA17_Chr1g0193371 57.025 121 50 1 1 121 1 119 8.82e-44 150
Msa1092830 MtrunA17_Chr8g0349261 63.208 106 38 1 14 118 13 118 1.05e-43 147
Msa1092830 MtrunA17_Chr2g0281071 62.857 105 39 0 14 118 13 117 1.53e-43 149
Msa1092830 MtrunA17_Chr1g0167661 52.239 134 58 1 14 141 12 145 1.59e-43 146
Msa1092830 MtrunA17_Chr4g0030881 57.522 113 41 1 15 120 8 120 1.88e-43 146
Msa1092830 MtrunA17_Chr1g0167691 60.952 105 41 0 14 118 12 116 2.07e-43 145
Msa1092830 MtrunA17_Chr8g0354661 62.136 103 39 0 14 116 37 139 2.24e-43 152
Msa1092830 MtrunA17_Chr7g0228891 61.321 106 41 0 14 119 12 117 3.19e-43 145
Msa1092830 MtrunA17_Chr7g0274581 56.881 109 47 0 14 122 12 120 3.58e-43 144
Msa1092830 MtrunA17_Chr3g0110351 60.748 107 42 0 14 120 12 118 4.59e-43 146
Msa1092830 MtrunA17_Chr7g0270891 41.315 213 89 6 1 192 1 198 4.98e-43 148
Msa1092830 MtrunA17_Chr5g0397231 59.821 112 43 1 1 112 1 110 5.66e-43 147
Msa1092830 MtrunA17_Chr7g0261281 61.682 107 41 0 14 120 12 118 6.10e-43 145
Msa1092830 MtrunA17_Chr5g0434571 60.748 107 42 0 14 120 48 154 6.50e-43 147
Msa1092830 MtrunA17_Chr4g0057031 61.905 105 40 0 14 118 12 116 1.09e-42 144
Msa1092830 MtrunA17_Chr8g0342541 55.932 118 50 1 1 118 1 116 1.47e-42 146
Msa1092830 MtrunA17_Chr3g0080861 55.556 108 48 0 14 121 37 144 1.57e-42 149
Msa1092830 MtrunA17_Chr4g0048511 61.905 105 40 0 14 118 13 117 1.92e-42 146
Msa1092830 MtrunA17_Chr1g0193801 43.299 194 84 5 1 172 1 190 1.94e-42 147
Msa1092830 MtrunA17_Chr2g0328771 55.752 113 50 0 14 126 20 132 2.64e-42 145
Msa1092830 MtrunA17_Chr4g0022931 53.906 128 58 1 14 140 13 140 2.83e-42 143
Msa1092830 MtrunA17_Chr3g0115821 58.879 107 44 0 14 120 12 118 3.13e-42 145
Msa1092830 MtrunA17_Chr5g0435101 56.034 116 49 1 3 118 2 115 3.27e-42 141
Msa1092830 MtrunA17_Chr3g0121241 60.952 105 41 0 14 118 42 146 3.45e-42 144
Msa1092830 MtrunA17_Chr1g0203441 54.237 118 54 0 12 129 11 128 4.45e-42 143
Msa1092830 MtrunA17_Chr4g0022901 49.342 152 74 2 7 157 6 155 4.49e-42 143
Msa1092830 MtrunA17_Chr7g0217741 59.813 107 43 0 14 120 12 118 4.92e-42 144
Msa1092830 MtrunA17_Chr1g0154031 50.000 136 68 0 14 149 76 211 5.36e-42 146
Msa1092830 MtrunA17_Chr8g0342521 55.932 118 50 1 1 118 1 116 7.82e-42 144
Msa1092830 MtrunA17_Chr2g0309911 56.637 113 47 1 6 118 5 115 1.17e-41 143
Msa1092830 MtrunA17_Chr4g0044421 56.780 118 49 1 1 118 1 116 1.22e-41 139
Msa1092830 MtrunA17_Chr8g0343831 59.259 108 44 0 13 120 7 114 2.05e-41 140
Msa1092830 MtrunA17_Chr1g0194951 47.368 152 54 1 14 165 12 137 2.65e-41 143
Msa1092830 MtrunA17_Chr4g0022911 48.684 152 70 2 14 157 13 164 2.81e-41 141
Msa1092830 MtrunA17_Chr7g0217221 53.043 115 54 0 14 128 12 126 5.24e-41 140
Msa1092830 MtrunA17_Chr6g0453471 58.879 107 44 0 14 120 12 118 5.69e-41 142
Msa1092830 MtrunA17_Chr1g0151941 57.547 106 44 1 14 118 12 117 6.08e-41 139
Msa1092830 MtrunA17_Chr3g0088461 56.604 106 46 0 14 119 22 127 7.84e-41 141
Msa1092830 MtrunA17_Chr6g0452271 57.547 106 45 0 13 118 11 116 1.41e-40 140
Msa1092830 MtrunA17_Chr1g0211161 55.172 116 50 1 3 118 4 117 1.52e-40 137
Msa1092830 MtrunA17_Chr3g0092401 57.009 107 46 0 14 120 13 119 1.68e-40 140
Msa1092830 MtrunA17_Chr3g0117091 54.167 120 53 1 1 120 1 118 2.04e-40 140
Msa1092830 MtrunA17_Chr2g0323351 55.932 118 50 1 14 131 12 127 2.14e-40 138
Msa1092830 MtrunA17_Chr7g0271241 60.000 110 42 1 1 110 1 108 2.33e-40 141
Msa1092830 MtrunA17_Chr7g0254411 55.140 107 48 0 14 120 12 118 5.66e-40 139
Msa1092830 MtrunA17_Chr6g0453211 56.522 115 50 0 14 128 12 126 6.09e-40 139
Msa1092830 MtrunA17_Chr8g0342481 52.846 123 57 1 14 135 12 134 6.16e-40 140
Msa1092830 MtrunA17_Chr4g0042671 60.000 105 42 0 14 118 12 116 8.08e-40 140
Msa1092830 MtrunA17_Chr4g0060721 52.101 119 55 1 14 132 13 129 1.04e-39 138
Msa1092830 MtrunA17_Chr4g0058631 42.604 169 93 3 1 167 1 167 1.14e-39 139
Msa1092830 MtrunA17_Chr4g0022881 54.783 115 52 0 14 128 12 126 1.32e-39 135
Msa1092830 MtrunA17_Chr2g0311221 58.879 107 41 1 6 112 9 112 3.06e-39 137
Msa1092830 MtrunA17_Chr4g0055981 48.077 156 66 5 14 162 55 202 7.32e-39 133
Msa1092830 MtrunA17_Chr2g0322521 57.018 114 45 1 7 116 18 131 6.40e-38 135
Msa1092830 MtrunA17_Chr7g0269831 61.905 105 40 0 14 118 12 116 8.85e-38 134
Msa1092830 MtrunA17_Chr6g0470971 42.623 183 92 3 10 192 10 179 9.16e-38 132
Msa1092830 MtrunA17_Chr4g0022891 56.863 102 44 0 14 115 12 113 4.04e-37 129
Msa1092830 MtrunA17_Chr3g0135311 41.209 182 104 3 13 192 11 191 4.96e-37 132
Msa1092830 MtrunA17_Chr1g0152011 43.827 162 81 5 13 164 11 172 5.16e-37 131
Msa1092830 MtrunA17_Chr3g0103281 53.774 106 49 0 13 118 11 116 1.01e-36 130
Msa1092830 MtrunA17_Chr7g0240821 37.500 224 104 6 18 206 5 227 1.58e-36 127
Msa1092830 MtrunA17_Chr4g0028311 56.604 106 45 1 14 118 12 117 2.16e-36 129
Msa1092830 MtrunA17_Chr1g0192411 53.774 106 49 0 14 119 12 117 5.47e-36 130
Msa1092830 MtrunA17_Chr2g0327351 59.406 101 40 1 13 112 11 111 6.06e-36 128
Msa1092830 MtrunA17_Chr5g0417821 54.545 110 50 0 9 118 2 111 7.82e-36 127
Msa1092830 MtrunA17_Chr5g0400821 50.847 118 57 1 13 129 11 128 9.38e-36 127
Msa1092830 MtrunA17_Chr7g0264641 52.212 113 53 1 13 124 11 123 7.01e-35 124
Msa1092830 MtrunA17_Chr5g0441131 49.123 114 57 1 7 119 2 115 7.51e-35 122
Msa1092830 MtrunA17_Chr5g0440781 51.429 105 50 1 13 116 11 115 1.41e-34 121
Msa1092830 MtrunA17_Chr4g0054391 44.022 184 86 7 13 192 11 181 3.24e-34 123
Msa1092830 MtrunA17_Chr5g0440761 51.429 105 50 1 13 116 11 115 6.30e-34 121
Msa1092830 MtrunA17_Chr5g0441141 51.429 105 50 1 13 116 11 115 7.10e-34 122
Msa1092830 MtrunA17_Chr8g0334881 51.485 101 48 1 14 113 10 110 8.66e-34 122
Msa1092830 MtrunA17_Chr4g0072751 57.426 101 42 1 13 112 11 111 1.74e-33 122
Msa1092830 MtrunA17_Chr4g0013361 34.911 169 94 4 14 174 10 170 5.86e-33 120
Msa1092830 MtrunA17_Chr6g0487491 49.180 122 53 2 14 126 12 133 2.47e-32 117
Msa1092830 MtrunA17_Chr5g0434931 51.429 105 51 0 14 118 35 139 2.61e-32 118
Msa1092830 MtrunA17_Chr8g0360111 54.455 101 46 0 14 114 25 125 2.87e-32 117
Msa1092830 MtrunA17_Chr7g0247131 66.216 74 25 0 46 119 10 83 4.96e-32 117
Msa1092830 MtrunA17_Chr3g0099141 52.941 85 40 0 11 95 37 121 7.34e-32 112
Msa1092830 MtrunA17_Chr5g0434911 51.429 105 51 0 14 118 21 125 7.70e-32 116
Msa1092830 MtrunA17_Chr5g0434831 51.429 105 51 0 14 118 7 111 8.65e-32 114
Msa1092830 MtrunA17_Chr7g0228991 51.429 105 51 0 14 118 29 133 3.62e-31 114
Msa1092830 MtrunA17_Chr7g0220341 46.154 117 61 1 14 128 25 141 7.76e-31 114
Msa1092830 MtrunA17_Chr5g0434841 50.476 105 52 0 14 118 20 124 2.40e-30 113
Msa1092830 MtrunA17_Chr2g0294811 57.831 83 35 0 8 90 6 88 6.57e-29 104
Msa1092830 MtrunA17_Chr6g0454921 50.495 101 49 1 10 110 9 108 1.27e-27 103
Msa1092830 MtrunA17_Chr8g0342531 51.648 91 42 1 1 91 1 89 4.15e-27 101
Msa1092830 MtrunA17_Chr2g0323321 58.025 81 34 0 14 94 11 91 4.37e-27 99.8
Msa1092830 MtrunA17_Chr8g0342511 51.685 89 41 1 1 89 1 87 8.49e-27 98.6
Msa1092830 MtrunA17_Chr4g0042611 58.442 77 32 0 14 90 12 88 1.25e-26 97.8
Msa1092830 MtrunA17_Chr5g0425591 50.000 90 44 1 7 95 2 91 1.50e-26 97.8
Msa1092830 MtrunA17_Chr4g0053431 34.375 192 111 4 16 203 5 185 1.74e-26 102
Msa1092830 MtrunA17_Chr7g0238631 45.370 108 58 1 11 118 108 214 1.98e-26 105
Msa1092830 MtrunA17_Chr7g0238631 37.736 106 64 2 16 120 61 165 1.07e-12 66.2
Msa1092830 MtrunA17_Chr4g0008551 47.525 101 52 1 16 116 38 137 3.02e-26 103
Msa1092830 MtrunA17_Chr5g0401731 48.515 101 51 1 16 116 15 114 3.29e-26 102
Msa1092830 MtrunA17_Chr8g0342461 51.087 92 42 2 1 91 1 90 1.50e-25 96.7
Msa1092830 MtrunA17_Chr5g0395221 54.545 77 35 0 14 90 12 88 1.56e-25 95.1
Msa1092830 MtrunA17_Chr3g0139671 37.681 138 84 2 11 148 80 215 3.22e-25 102
Msa1092830 MtrunA17_Chr3g0139671 33.333 114 74 2 16 128 33 145 1.68e-11 62.8
Msa1092830 MtrunA17_Chr8g0342471 51.087 92 42 2 1 91 1 90 3.82e-25 95.5
Msa1092830 MtrunA17_Chr3g0133601 45.545 101 54 1 16 116 37 136 3.93e-25 97.8
Msa1092830 MtrunA17_Chr5g0429661 41.964 112 64 1 16 127 122 232 6.34e-25 99.8
Msa1092830 MtrunA17_Chr1g0157731 40.741 108 63 1 11 118 86 192 7.04e-25 101
Msa1092830 MtrunA17_Chr1g0157731 33.333 114 74 2 16 128 39 151 2.10e-11 62.4
Msa1092830 MtrunA17_Chr6g0460661 45.263 95 51 1 16 110 16 109 4.70e-24 93.6
Msa1092830 MtrunA17_Chr3g0117511 37.815 119 73 1 16 134 183 300 9.72e-24 97.8
Msa1092830 MtrunA17_Chr4g0058991 46.939 98 49 2 14 110 207 302 4.14e-23 95.9
Msa1092830 MtrunA17_Chr6g0480581 42.574 101 57 1 16 116 4 103 3.58e-22 90.5
Msa1092830 MtrunA17_Chr7g0228531 39.344 122 72 2 10 131 214 333 4.27e-22 92.8
Msa1092830 MtrunA17_Chr6g0453751 48.352 91 38 2 14 95 20 110 6.03e-22 87.0
Msa1092830 MtrunA17_Chr5g0437321 42.857 105 59 1 10 114 13 116 6.35e-22 90.9
Msa1092830 MtrunA17_Chr5g0417621 37.190 121 75 1 4 124 122 241 2.37e-21 90.9
Msa1092830 MtrunA17_Chr7g0229101 55.714 70 31 0 46 115 4 73 7.70e-21 86.3
Msa1092830 MtrunA17_Chr7g0238651 38.889 108 64 1 19 124 10 117 7.91e-21 88.6
Msa1092830 MtrunA17_Chr7g0254261 29.609 179 118 3 16 187 89 266 3.02e-20 87.0
Msa1092830 MtrunA17_Chr3g0093811 50.667 75 37 0 46 120 14 88 3.51e-20 85.5
Msa1092830 MtrunA17_Chr8g0362231 42.202 109 62 1 19 127 25 132 3.62e-20 87.4
Msa1092830 MtrunA17_Chr5g0416341 43.564 101 56 1 19 119 29 128 3.67e-20 87.8
Msa1092830 MtrunA17_Chr7g0229131 42.553 94 52 1 46 137 4 97 4.22e-20 83.2
Msa1092830 MtrunA17_Chr6g0460671 30.539 167 109 2 16 182 99 258 5.16e-20 86.3
Msa1092830 MtrunA17_Chr5g0397841 43.878 98 54 1 13 110 107 203 6.76e-20 87.0
Msa1092830 MtrunA17_Chr5g0397841 33.333 117 75 2 15 128 54 170 4.71e-12 64.3
Msa1092830 MtrunA17_Chr4g0042501 35.897 117 74 1 4 120 93 208 6.79e-20 86.7
Msa1092830 MtrunA17_Chr5g0434901 55.882 68 30 0 48 115 7 74 1.16e-19 80.9
Msa1092830 MtrunA17_Chr7g0228401 44.318 88 48 1 25 112 288 374 1.13e-18 83.6
Msa1092830 MtrunA17_Chr3g0125801 37.600 125 75 2 1 125 1 122 1.13e-18 82.0
Msa1092830 MtrunA17_Chr1g0177901 45.349 86 46 1 25 110 3 87 1.33e-18 80.5
Msa1092830 MtrunA17_Chr7g0233061 39.516 124 64 4 16 134 180 297 3.24e-18 81.6
Msa1092830 MtrunA17_Chr7g0228481 40.594 101 58 2 10 110 214 312 1.68e-17 80.1
Msa1092830 MtrunA17_Chr1g0193901 45.055 91 48 2 7 95 4 94 1.86e-15 69.3
Msa1092830 MtrunA17_Chr1g0193891 45.055 91 48 2 7 95 4 94 1.86e-15 69.3
Msa1092830 MtrunA17_Chr1g0193871 45.055 91 48 2 7 95 4 94 1.86e-15 69.3
Msa1092830 MtrunA17_Chr1g0193881 45.055 91 48 2 7 95 4 94 1.86e-15 69.3
Msa1092830 MtrunA17_Chr6g0483051 31.579 114 76 2 9 122 62 173 7.27e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1092830 AT3G27810.1 59.048 210 73 2 11 207 17 226 1.60e-82 245
Msa1092830 AT5G40350.1 59.259 216 77 5 1 207 1 214 1.57e-79 237
Msa1092830 AT3G01530.1 59.596 198 64 4 10 207 21 202 1.29e-75 226
Msa1092830 AT1G68320.1 75.455 110 27 0 11 120 16 125 2.48e-61 193
Msa1092830 AT1G25340.1 70.588 119 34 1 3 120 6 124 3.62e-61 192
Msa1092830 AT1G48000.1 68.333 120 38 0 13 132 31 150 5.12e-60 188
Msa1092830 AT2G47190.1 73.874 111 29 0 10 120 16 126 2.05e-59 187
Msa1092830 AT5G49620.1 76.423 123 29 0 10 132 22 144 3.59e-58 186
Msa1092830 AT3G27810.2 52.874 174 69 2 47 207 4 177 3.23e-56 176
Msa1092830 AT1G25340.2 67.227 119 33 2 3 120 6 119 1.21e-55 178
Msa1092830 AT1G25340.3 67.227 119 33 2 3 120 6 119 2.67e-55 178
Msa1092830 AT3G06490.1 73.333 120 32 0 13 132 18 137 3.11e-55 178
Msa1092830 AT5G49620.2 68.613 137 29 1 10 132 22 158 1.62e-54 176
Msa1092830 AT3G24310.1 67.826 115 37 0 15 129 19 133 6.85e-54 173
Msa1092830 AT4G13480.1 68.142 113 36 0 15 127 7 119 9.84e-53 170
Msa1092830 AT5G40350.2 53.892 167 69 4 47 207 5 169 1.07e-51 164
Msa1092830 AT3G30210.1 64.486 107 38 0 15 121 28 134 6.80e-50 163
Msa1092830 AT5G59780.3 58.772 114 47 0 13 126 7 120 5.12e-48 157
Msa1092830 AT3G46130.1 59.292 113 46 0 10 122 5 117 1.32e-47 157
Msa1092830 AT5G14750.1 50.955 157 72 3 3 155 2 157 1.51e-46 152
Msa1092830 AT1G16490.1 55.039 129 58 0 14 142 14 142 2.64e-46 154
Msa1092830 AT3G02940.2 65.421 107 37 0 14 120 12 118 1.03e-45 154
Msa1092830 AT3G02940.1 65.421 107 37 0 14 120 12 118 1.44e-45 154
Msa1092830 AT3G02940.3 65.421 107 37 0 14 120 12 118 1.44e-45 154
Msa1092830 AT1G22640.1 44.162 197 90 5 16 206 14 196 1.60e-45 151
Msa1092830 AT3G13890.2 57.627 118 48 1 1 118 1 116 2.59e-45 154
Msa1092830 AT2G47460.1 64.762 105 37 0 14 118 12 116 3.84e-45 154
Msa1092830 AT1G09540.1 59.167 120 47 1 1 120 1 118 4.22e-45 153
Msa1092830 AT1G63910.1 54.962 131 57 1 1 131 1 129 7.91e-45 153
Msa1092830 AT5G40330.1 52.000 125 60 0 10 134 8 132 1.14e-44 148
Msa1092830 AT1G06180.1 59.130 115 47 0 14 128 12 126 1.19e-44 149
Msa1092830 AT4G09460.1 66.019 103 35 0 16 118 14 116 1.31e-44 149
Msa1092830 AT1G57560.1 50.331 151 68 2 1 146 1 149 2.74e-44 150
Msa1092830 AT1G35515.1 65.049 103 36 0 16 118 14 116 3.80e-44 147
Msa1092830 AT2G31180.1 50.667 150 69 2 14 158 12 161 4.24e-44 147
Msa1092830 AT1G57560.2 59.322 118 46 1 1 118 1 116 4.92e-44 148
Msa1092830 AT5G16770.4 62.617 107 40 0 14 120 12 118 6.63e-44 149
Msa1092830 AT5G16770.3 62.617 107 40 0 14 120 12 118 6.63e-44 149
Msa1092830 AT4G34990.1 46.707 167 79 1 16 172 14 180 6.69e-44 148
Msa1092830 AT4G38620.1 66.019 103 35 0 16 118 14 116 7.54e-44 148
Msa1092830 AT5G16770.1 62.617 107 40 0 14 120 12 118 9.82e-44 149
Msa1092830 AT5G16770.2 62.617 107 40 0 14 120 12 118 9.82e-44 149
Msa1092830 AT5G54230.1 63.810 105 38 0 14 118 12 116 1.15e-43 149
Msa1092830 AT4G12350.1 51.007 149 69 1 14 162 12 156 1.31e-43 147
Msa1092830 AT5G26660.1 56.667 120 50 1 1 120 1 118 1.55e-43 149
Msa1092830 AT5G65230.1 59.292 113 46 0 8 120 6 118 1.89e-43 148
Msa1092830 AT3G27920.1 52.846 123 58 0 10 132 10 132 1.90e-43 145
Msa1092830 AT4G28110.1 61.111 108 42 0 14 121 12 119 2.14e-43 147
Msa1092830 AT3G11440.2 60.194 103 41 0 14 116 41 143 2.87e-43 151
Msa1092830 AT2G16720.1 64.078 103 37 0 16 118 14 116 3.15e-43 146
Msa1092830 AT5G61420.2 55.000 120 52 1 1 120 1 118 4.04e-43 148
Msa1092830 AT5G07690.1 57.759 116 47 1 1 116 1 114 4.28e-43 147
Msa1092830 AT2G32460.2 53.659 123 54 1 14 133 6 128 4.36e-43 150
Msa1092830 AT2G32460.1 53.659 123 54 1 14 133 18 140 4.39e-43 150
Msa1092830 AT3G62610.1 61.905 105 40 0 14 118 12 116 4.41e-43 147
Msa1092830 AT3G13540.1 57.759 116 48 1 14 128 23 138 4.80e-43 145
Msa1092830 AT5G35550.1 49.007 151 72 2 1 150 1 147 4.81e-43 145
Msa1092830 AT3G23250.1 60.377 106 42 0 14 119 12 117 5.50e-43 146
Msa1092830 AT5G06100.1 61.165 103 40 0 14 116 32 134 6.56e-43 149
Msa1092830 AT4G17785.2 59.167 120 48 1 1 120 1 119 6.86e-43 147
Msa1092830 AT5G60890.1 59.459 111 45 0 10 120 8 118 6.98e-43 146
Msa1092830 AT5G10280.1 56.250 112 49 0 9 120 7 118 8.37e-43 147
Msa1092830 AT4G17785.1 59.167 120 48 1 1 120 1 119 8.51e-43 147
Msa1092830 AT3G01140.2 52.482 141 59 1 14 154 12 144 8.64e-43 147
Msa1092830 AT4G21440.1 60.952 105 41 0 14 118 12 116 8.86e-43 147
Msa1092830 AT4G05100.1 57.627 118 49 1 1 118 1 117 9.17e-43 146
Msa1092830 AT5G07700.1 60.000 105 42 0 14 118 12 116 1.09e-42 146
Msa1092830 AT5G07700.2 60.000 105 42 0 14 118 12 116 1.09e-42 146
Msa1092830 AT4G22680.1 61.905 105 40 0 14 118 12 116 1.16e-42 144
Msa1092830 AT1G56160.1 51.095 137 67 0 14 150 14 150 1.36e-42 145
Msa1092830 AT3G11440.3 60.194 103 41 0 14 116 41 143 1.87e-42 150
Msa1092830 AT3G11440.4 60.194 103 41 0 14 116 41 143 1.87e-42 150
Msa1092830 AT3G11440.1 60.194 103 41 0 14 116 41 143 1.87e-42 150
Msa1092830 AT1G79180.1 59.259 108 44 0 14 121 14 121 2.29e-42 144
Msa1092830 AT5G06100.5 61.165 103 40 0 14 116 32 134 2.48e-42 149
Msa1092830 AT5G06100.2 61.165 103 40 0 14 116 32 134 2.48e-42 149
Msa1092830 AT5G06100.3 61.165 103 40 0 14 116 32 134 2.48e-42 149
Msa1092830 AT5G06100.4 61.165 103 40 0 14 116 32 134 2.48e-42 149
Msa1092830 AT3G13890.1 53.543 127 48 2 1 118 1 125 2.57e-42 146
Msa1092830 AT3G01140.1 52.482 141 59 1 14 154 55 187 2.86e-42 147
Msa1092830 AT5G15310.4 61.905 105 40 0 14 118 12 116 3.19e-42 143
Msa1092830 AT5G12870.1 52.941 119 56 0 6 124 10 128 3.94e-42 144
Msa1092830 AT5G15310.1 61.905 105 40 0 14 118 12 116 4.02e-42 145
Msa1092830 AT4G26930.1 56.481 108 47 0 14 121 19 126 4.50e-42 146
Msa1092830 AT5G16600.1 59.813 107 43 0 14 120 12 118 5.54e-42 144
Msa1092830 AT5G15310.2 61.905 105 40 0 14 118 12 116 5.85e-42 144
Msa1092830 AT5G49330.1 61.905 105 40 0 14 118 12 116 6.06e-42 145
Msa1092830 AT1G66230.1 57.407 108 46 0 14 121 12 119 9.07e-42 142
Msa1092830 AT1G18570.1 61.905 105 40 0 14 118 13 117 1.00e-41 144
Msa1092830 AT5G52600.1 56.140 114 46 1 14 127 12 121 2.30e-41 139
Msa1092830 AT4G01680.3 55.462 119 51 1 1 119 1 117 3.22e-41 140
Msa1092830 AT3G61250.1 59.048 105 43 0 14 118 12 116 3.48e-41 142
Msa1092830 AT3G53200.1 57.018 114 48 1 10 123 5 117 3.57e-41 140
Msa1092830 AT3G47600.1 55.856 111 49 0 14 124 12 122 4.05e-41 142
Msa1092830 AT5G14340.1 58.879 107 44 0 14 120 24 130 4.15e-41 140
Msa1092830 AT5G55020.1 55.556 108 48 0 14 121 26 133 5.80e-41 145
Msa1092830 AT4G01680.1 55.462 119 51 1 1 119 1 117 8.37e-41 141
Msa1092830 AT3G08500.1 56.481 108 47 0 12 119 28 135 8.39e-41 142
Msa1092830 AT1G34670.1 58.879 107 44 0 14 120 12 118 8.50e-41 142
Msa1092830 AT1G08810.1 53.571 112 52 0 14 125 12 123 1.06e-40 140
Msa1092830 AT5G62470.2 55.856 111 49 0 14 124 12 122 1.57e-40 141
Msa1092830 AT3G12720.1 57.143 105 45 0 14 118 22 126 2.67e-40 139
Msa1092830 AT1G74650.1 57.547 106 45 0 13 118 11 116 8.58e-40 139
Msa1092830 AT3G28910.1 53.043 115 54 0 14 128 12 126 1.03e-39 138
Msa1092830 AT1G74430.1 57.944 107 45 0 14 120 12 118 1.15e-39 137
Msa1092830 AT1G74080.1 60.194 103 41 0 14 116 12 114 3.53e-39 137
Msa1092830 AT2G26960.1 56.436 101 44 0 16 116 22 122 5.38e-39 139
Msa1092830 AT5G62470.1 55.856 111 48 1 14 124 12 121 1.65e-38 136
Msa1092830 AT5G62320.1 56.250 112 42 1 14 118 13 124 2.04e-38 133
Msa1092830 AT4G37780.1 52.991 117 54 1 14 129 12 128 4.91e-38 134
Msa1092830 AT3G12820.1 55.752 113 47 1 6 118 9 118 1.62e-37 130
Msa1092830 AT4G01680.2 50.382 131 51 2 1 119 1 129 2.28e-37 133
Msa1092830 AT3G49690.1 52.991 117 54 1 13 128 11 127 9.80e-37 130
Msa1092830 AT5G65790.1 52.137 117 55 1 13 128 11 127 4.51e-36 130
Msa1092830 AT5G23000.1 55.660 106 46 1 14 118 12 117 4.64e-36 129
Msa1092830 AT5G56110.1 53.774 106 49 0 13 118 11 116 7.28e-36 128
Msa1092830 AT1G18710.1 55.140 107 48 0 14 120 12 118 8.22e-36 127
Msa1092830 AT1G79180.2 45.390 141 44 1 14 121 14 154 1.14e-35 128
Msa1092830 AT3G28470.1 56.000 100 44 0 13 112 11 110 1.45e-35 127
Msa1092830 AT5G57620.1 54.206 107 48 1 13 118 11 117 1.70e-35 127
Msa1092830 AT2G36890.1 56.075 107 46 1 13 118 11 117 2.02e-35 127
Msa1092830 AT3G48920.1 47.414 116 59 1 15 128 19 134 2.77e-35 125
Msa1092830 AT4G25560.1 53.922 102 47 0 15 116 11 112 2.85e-35 126
Msa1092830 AT2G36890.2 56.075 107 46 1 13 118 52 158 3.49e-35 127
Msa1092830 AT3G46130.3 66.667 78 26 0 45 122 8 85 5.57e-35 124
Msa1092830 AT5G59780.2 66.250 80 27 0 47 126 20 99 5.95e-35 123
Msa1092830 AT5G52260.1 50.420 119 58 1 15 133 13 130 1.02e-34 124
Msa1092830 AT3G46130.4 68.421 76 24 0 47 122 20 95 1.90e-34 122
Msa1092830 AT1G66370.1 52.427 103 49 0 14 116 8 110 6.34e-33 119
Msa1092830 AT3G60460.1 46.667 105 55 1 13 116 10 114 7.58e-33 120
Msa1092830 AT3G53200.2 64.935 77 26 1 47 123 9 84 5.95e-31 112
Msa1092830 AT1G66380.1 53.398 103 48 0 14 116 8 110 5.61e-30 108
Msa1092830 AT5G35550.2 50.459 109 51 1 42 150 45 150 1.39e-29 110
Msa1092830 AT5G26660.2 63.514 74 27 0 47 120 14 87 1.59e-29 112
Msa1092830 AT1G56650.1 53.398 103 48 0 14 116 8 110 2.83e-29 109
Msa1092830 AT5G14750.3 47.500 120 56 3 42 155 5 123 6.43e-29 106
Msa1092830 AT2G26950.1 45.918 98 53 0 16 113 18 115 1.05e-28 110
Msa1092830 AT1G66390.1 53.398 103 48 0 14 116 8 110 1.63e-28 107
Msa1092830 AT3G12820.2 63.768 69 25 0 50 118 2 70 1.17e-26 101
Msa1092830 AT3G47600.2 56.410 78 34 0 47 124 39 116 1.99e-26 103
Msa1092830 AT5G11510.5 37.063 143 89 1 11 153 76 217 3.74e-26 105
Msa1092830 AT5G11510.5 32.456 114 75 2 16 128 29 141 1.81e-11 63.2
Msa1092830 AT3G27785.1 40.496 121 70 2 3 122 176 295 3.75e-26 104
Msa1092830 AT5G11510.2 37.063 143 89 1 11 153 76 217 4.04e-26 105
Msa1092830 AT5G11510.2 32.456 114 75 2 16 128 29 141 1.84e-11 63.2
Msa1092830 AT5G11510.3 37.063 143 89 1 11 153 76 217 4.22e-26 105
Msa1092830 AT5G11510.3 32.456 114 75 2 16 128 29 141 2.07e-11 63.2
Msa1092830 AT5G11510.1 37.063 143 89 1 11 153 76 217 4.22e-26 105
Msa1092830 AT5G11510.1 32.456 114 75 2 16 128 29 141 2.07e-11 63.2
Msa1092830 AT5G11510.4 37.063 143 89 1 11 153 76 217 4.22e-26 105
Msa1092830 AT5G11510.4 32.456 114 75 2 16 128 29 141 2.07e-11 63.2
Msa1092830 AT2G23290.1 40.769 130 76 1 7 136 4 132 1.48e-25 101
Msa1092830 AT5G02320.1 43.119 109 61 1 11 119 122 229 3.04e-25 102
Msa1092830 AT5G02320.2 43.119 109 61 1 11 119 122 229 3.04e-25 102
Msa1092830 AT3G09370.2 44.340 106 58 1 11 116 130 234 3.09e-25 102
Msa1092830 AT3G09370.2 36.792 106 65 2 16 120 83 187 9.49e-11 60.8
Msa1092830 AT3G09370.1 44.340 106 58 1 11 116 125 229 3.27e-25 102
Msa1092830 AT3G09370.1 36.792 106 65 2 16 120 78 182 9.73e-11 60.8
Msa1092830 AT3G09370.3 44.340 106 58 1 11 116 138 242 3.73e-25 102
Msa1092830 AT3G09370.3 36.792 106 65 2 16 120 91 195 9.72e-11 60.8
Msa1092830 AT5G02320.3 43.119 109 61 1 11 119 62 169 4.71e-25 102
Msa1092830 AT3G09230.1 36.184 152 95 2 13 164 52 201 1.53e-24 99.8
Msa1092830 AT4G18770.1 47.368 95 49 1 16 110 217 310 2.92e-24 99.4
Msa1092830 AT5G11050.1 39.837 123 71 2 13 133 102 223 4.67e-24 98.6
Msa1092830 AT5G58850.1 38.462 130 78 2 16 144 105 233 5.44e-24 98.6
Msa1092830 AT4G32730.5 38.889 108 65 1 11 118 82 188 1.16e-23 98.6
Msa1092830 AT4G32730.5 32.456 114 75 2 16 128 35 147 3.13e-11 62.4
Msa1092830 AT4G32730.4 38.889 108 65 1 11 118 82 188 1.16e-23 98.6
Msa1092830 AT4G32730.4 32.456 114 75 2 16 128 35 147 3.13e-11 62.4
Msa1092830 AT4G32730.3 38.889 108 65 1 11 118 82 188 1.16e-23 98.6
Msa1092830 AT4G32730.3 32.456 114 75 2 16 128 35 147 3.13e-11 62.4
Msa1092830 AT4G32730.2 38.889 108 65 1 11 118 82 188 1.16e-23 98.6
Msa1092830 AT4G32730.2 32.456 114 75 2 16 128 35 147 3.13e-11 62.4
Msa1092830 AT4G32730.1 38.889 108 65 1 11 118 82 188 1.30e-23 98.2
Msa1092830 AT4G32730.1 32.456 114 75 2 16 128 35 147 2.60e-11 62.8
Msa1092830 AT3G50060.1 34.591 159 97 3 13 170 3 155 1.75e-23 95.5
Msa1092830 AT4G37260.1 45.545 101 54 1 16 116 13 112 2.72e-23 95.5
Msa1092830 AT1G69560.1 37.190 121 75 1 4 124 95 214 3.42e-23 95.1
Msa1092830 AT1G69560.2 37.190 121 75 1 4 124 111 230 3.81e-23 95.5
Msa1092830 AT3G55730.1 45.545 101 54 1 16 116 56 155 5.06e-23 95.5
Msa1092830 AT3G29020.1 37.600 125 76 2 16 139 65 188 2.17e-22 91.3
Msa1092830 AT3G29020.2 37.600 125 76 2 16 139 67 190 3.44e-22 92.0
Msa1092830 AT5G40360.1 43.299 97 54 1 14 110 156 251 4.56e-22 92.4
Msa1092830 AT5G67300.1 43.269 104 58 1 13 116 3 105 1.33e-21 90.5
Msa1092830 AT2G39880.1 44.554 101 55 1 16 116 50 149 1.67e-21 91.3
Msa1092830 AT2G25230.1 30.732 205 124 5 13 202 23 224 3.16e-21 88.2
Msa1092830 AT1G22640.3 37.908 153 75 5 60 206 1 139 3.45e-21 87.4
Msa1092830 AT5G14750.4 46.392 97 50 2 60 155 1 96 6.81e-21 85.1
Msa1092830 AT5G14750.2 46.392 97 50 2 60 155 1 96 6.81e-21 85.1
Msa1092830 AT5G17800.1 36.607 112 70 1 16 127 93 203 8.36e-21 88.6
Msa1092830 AT1G14350.2 43.564 101 56 1 19 119 28 127 3.28e-20 88.2
Msa1092830 AT1G14350.1 43.564 101 56 1 19 119 28 127 3.28e-20 88.2
Msa1092830 AT1G17950.1 37.607 117 72 1 16 132 5 120 3.46e-20 85.9
Msa1092830 AT4G00540.2 38.938 113 65 2 11 120 98 209 3.54e-20 87.8
Msa1092830 AT3G23250.2 60.000 60 24 0 60 119 1 60 4.35e-20 85.1
Msa1092830 AT4G00540.1 38.938 113 65 2 11 120 96 207 6.11e-20 87.4
Msa1092830 AT1G26780.2 38.095 105 64 1 16 120 98 201 6.85e-20 86.7
Msa1092830 AT1G26780.1 35.088 114 73 1 16 129 98 210 7.08e-20 85.5
Msa1092830 AT5G59780.1 63.636 55 20 0 72 126 1 55 8.05e-20 82.8
Msa1092830 AT1G66380.3 53.947 76 35 0 41 116 2 77 1.93e-19 80.1
Msa1092830 AT3G46130.2 69.388 49 15 0 72 120 1 49 2.00e-19 82.4
Msa1092830 AT2G37630.1 37.963 108 65 1 19 124 7 114 2.38e-19 85.1
Msa1092830 AT1G73410.1 42.056 107 59 2 16 121 6 110 3.43e-19 82.8
Msa1092830 AT5G39700.1 34.307 137 87 2 15 149 55 190 7.64e-19 80.9
Msa1092830 AT1G73410.2 42.056 107 59 2 16 121 6 110 8.52e-19 80.9
Msa1092830 AT4G33450.1 36.036 111 70 1 10 120 13 122 1.14e-18 81.6
Msa1092830 AT1G18960.1 35.897 117 67 3 4 120 3 111 1.68e-18 82.0
Msa1092830 AT2G02820.2 42.574 101 57 1 19 119 33 132 6.90e-18 81.6
Msa1092830 AT2G02820.3 42.574 101 57 1 19 119 33 132 7.30e-18 80.5
Msa1092830 AT2G02820.1 42.574 101 57 1 19 119 33 132 7.30e-18 81.3
Msa1092830 AT1G66380.2 50.000 78 39 0 14 91 8 85 9.02e-18 75.9
Msa1092830 AT1G71030.2 53.125 64 30 0 53 116 5 68 1.39e-17 77.4
Msa1092830 AT1G71030.1 46.154 78 41 1 41 118 8 84 1.77e-17 77.4
Msa1092830 AT5G40430.1 33.540 161 93 6 2 152 37 193 6.41e-17 77.0
Msa1092830 AT1G14350.3 46.774 62 33 0 58 119 23 84 9.49e-13 66.6
Msa1092830 AT1G14350.4 46.774 62 33 0 58 119 23 84 9.49e-13 66.6
Msa1092830 AT3G18100.1 38.462 104 62 2 14 117 544 645 1.10e-12 66.6
Msa1092830 AT3G18100.3 38.462 104 62 2 14 117 496 597 1.42e-12 66.2
Msa1092830 AT3G18100.4 38.462 104 62 2 14 117 383 484 1.47e-12 66.2
Msa1092830 AT3G18100.2 38.462 104 62 2 14 117 331 432 1.84e-12 65.9
Msa1092830 AT4G25560.2 57.778 45 19 0 72 116 2 46 1.92e-12 64.3
Msa1092830 AT1G16490.2 49.231 65 31 1 78 142 11 73 5.93e-12 62.8

Find 53 sgRNAs with CRISPR-Local

Find 315 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCTCTTACCAAGGAATTT+TGG 0.171003 7_3:+10671553 Msa1092830:CDS
GTTCAGCAATGTTGGAAATT+TGG 0.179145 7_3:-10671505 None:intergenic
CAGCTTGCTTGATATGCTTT+TGG 0.186213 7_3:-10671403 None:intergenic
CCGAAGTCTGCAACTCTTTC+CGG 0.198542 7_3:-10666806 None:intergenic
GTAGTTCTTTATCTCATTAT+CGG 0.309254 7_3:-10671366 None:intergenic
TTGTCACTGCAACTACTAAA+TGG 0.327480 7_3:+10671656 Msa1092830:CDS
CCAAACACCTTCACCATGAT+TGG 0.346620 7_3:-10666514 None:intergenic
CCAATCATGGTGAAGGTGTT+TGG 0.360993 7_3:+10666514 Msa1092830:CDS
GATAATAATAATCAATGTAT+AGG 0.365462 7_3:+10671473 Msa1092830:CDS
ATCTCATTATCGGTTCTTCC+CGG 0.368690 7_3:-10671356 None:intergenic
GAAAATCGCAAAACATTTAC+CGG 0.382424 7_3:+10671337 Msa1092830:CDS
TTCCAACATTGCTGAACCTA+TGG 0.392818 7_3:+10671511 Msa1092830:CDS
AGAGGGTGGTGAGATAATAT+TGG 0.413544 7_3:-10671537 None:intergenic
AATCAAGTTGTTCTAACTAC+TGG 0.421398 7_3:+10671618 Msa1092830:CDS
TTCATGCTAAGTGGGGAAAC+AGG 0.422675 7_3:+10666902 Msa1092830:CDS
CTTGATTGATCAGAGATTGT+AGG 0.449822 7_3:-10671602 None:intergenic
TTCCAAAATTCCTTGGTAAG+AGG 0.451401 7_3:-10671555 None:intergenic
CAAGGTCCCTTTCGTACATC+AGG 0.457767 7_3:-10666453 None:intergenic
ATCAACTATATTGCCAATCA+TGG 0.459614 7_3:+10666501 Msa1092830:CDS
GAAATGGTTCCAAAATTCCT+TGG 0.461055 7_3:-10671562 None:intergenic
TCCAAAATTCCTTGGTAAGA+GGG 0.465311 7_3:-10671554 None:intergenic
ATAATGAGATAAAGAACTAC+TGG 0.481229 7_3:+10671369 Msa1092830:CDS
CATTGAACTTCATGCTAAGT+GGG 0.494832 7_3:+10666894 Msa1092830:CDS
GTCCATAGGTTCAGCAATGT+TGG 0.497472 7_3:-10671513 None:intergenic
TTGATTGATCAGAGATTGTA+GGG 0.501770 7_3:-10671601 None:intergenic
ATATTCCCTCGTCTAACATC+AGG 0.503266 7_3:-10666847 None:intergenic
ACGAAAGGGACCTTGGACAA+TGG 0.505513 7_3:+10666461 Msa1092830:CDS
AACTCCTTGGCTAAATCTGC+TGG 0.506754 7_3:+10666537 Msa1092830:CDS
ATGATCAAGAGTTGTTCCTC+AGG 0.507271 7_3:-10666874 None:intergenic
CTGATGTACGAAAGGGACCT+TGG 0.524725 7_3:+10666454 Msa1092830:CDS
AACTGATGATGAGTTGGAAA+TGG 0.536466 7_3:-10671578 None:intergenic
TCATTGAACTTCATGCTAAG+TGG 0.536877 7_3:+10666893 Msa1092830:CDS
AACTCTCAATCTCAAGAGCA+AGG 0.554883 7_3:+10671428 Msa1092830:CDS
TGAAGGTGTTTGGAACTCCT+TGG 0.569511 7_3:+10666524 Msa1092830:CDS
AAGTCTTCTTCCATTGTCCA+AGG 0.573158 7_3:-10666471 None:intergenic
CAAGATCCTGATGTACGAAA+GGG 0.574930 7_3:+10666447 Msa1092830:CDS
GTAGGGAACTGATGATGAGT+TGG 0.576459 7_3:-10671584 None:intergenic
ATCTCACCACCCTCTTACCA+AGG 0.583108 7_3:+10671545 Msa1092830:CDS
TATATTGCCAATCATGGTGA+AGG 0.589500 7_3:+10666507 Msa1092830:CDS
TTGTTCTAACTACTGGAGCA+TGG 0.590689 7_3:+10671625 Msa1092830:CDS
ACAAGATCCTGATGTACGAA+AGG 0.594892 7_3:+10666446 Msa1092830:CDS
CCGGAAAGAGTTGCAGACTT+CGG 0.598168 7_3:+10666806 Msa1092830:CDS
GAGATAATATTGGTGTCCAT+AGG 0.606109 7_3:-10671527 None:intergenic
ATTACCAGCAGATTTAGCCA+AGG 0.612713 7_3:-10666541 None:intergenic
TAAAGAACTACTGGAGGACA+AGG 0.615004 7_3:+10671378 Msa1092830:CDS
CTTCGACCTGATGTTAGACG+AGG 0.623587 7_3:+10666841 Msa1092830:CDS
AAAATTCCTTGGTAAGAGGG+TGG 0.641242 7_3:-10671551 None:intergenic
GAAAGAGTTGCAGACTTCGG+TGG 0.647312 7_3:+10666809 Msa1092830:CDS
ATGAGATAAAGAACTACTGG+AGG 0.648874 7_3:+10671372 Msa1092830:CDS
TTCGACCTGATGTTAGACGA+GGG 0.661220 7_3:+10666842 Msa1092830:CDS
ATTGAACTTCATGCTAAGTG+GGG 0.662589 7_3:+10666895 Msa1092830:CDS
AAAATCGCAAAACATTTACC+GGG 0.667425 7_3:+10671338 Msa1092830:CDS
ACGAGGGAATATTACACCTG+AGG 0.692927 7_3:+10666858 Msa1092830:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTAAATAATAATAATAA+AGG + chr7_3:10666609-10666628 Msa1092830:intron 0.0%
!!! TTATCTTTATTTTTACTTTT+TGG + chr7_3:10668695-10668714 Msa1092830:intron 10.0%
!! ACATTCAAAATATATAAAAA+AGG + chr7_3:10668764-10668783 Msa1092830:intron 10.0%
!! AAAAAAGGATAAAAAAAAAA+AGG + chr7_3:10668779-10668798 Msa1092830:intron 10.0%
!! TATAAGTATAAGAAAATATT+GGG - chr7_3:10668906-10668925 None:intergenic 10.0%
!! ATATAAGTATAAGAAAATAT+TGG - chr7_3:10668907-10668926 None:intergenic 10.0%
!!! TTCTCTTTTTTTTTTTTTTT+TGG - chr7_3:10669829-10669848 None:intergenic 10.0%
!!! ATATTATTTTATTTGTCATT+CGG - chr7_3:10670192-10670211 None:intergenic 10.0%
!! CATAAATCATCATAATAATA+TGG + chr7_3:10666756-10666775 Msa1092830:intron 15.0%
!!! ACTTTTTTTTTTTTTTTGAG+GGG - chr7_3:10667001-10667020 None:intergenic 15.0%
!!! CACTTTTTTTTTTTTTTTGA+GGG - chr7_3:10667002-10667021 None:intergenic 15.0%
!!! TTTGCTTTATTTTTAACTTT+TGG + chr7_3:10667119-10667138 Msa1092830:intron 15.0%
!!! TTGTTTTGTTGTTAAATAAA+AGG - chr7_3:10667417-10667436 None:intergenic 15.0%
!! GAATATTATAAGATTAGTAA+TGG + chr7_3:10667467-10667486 Msa1092830:intron 15.0%
!!! CATTTTATCGTATAAATTTT+TGG + chr7_3:10667501-10667520 Msa1092830:intron 15.0%
!!! AATATGTATGTTTTTTTACT+AGG - chr7_3:10667720-10667739 None:intergenic 15.0%
!! AGTAAAAAAACATACATATT+TGG + chr7_3:10667720-10667739 Msa1092830:intron 15.0%
!! TGTAAATAAAGAGAAAAATT+AGG + chr7_3:10668362-10668381 Msa1092830:intron 15.0%
!! GTAAATAAAGAGAAAAATTA+GGG + chr7_3:10668363-10668382 Msa1092830:intron 15.0%
!!! TGATATTTTTCAAAATAAAG+TGG - chr7_3:10668405-10668424 None:intergenic 15.0%
!!! TATATTTTGAATGTACTTTT+AGG - chr7_3:10668758-10668777 None:intergenic 15.0%
!!! GTTTTCTGTTTATTTAATTA+CGG - chr7_3:10669665-10669684 None:intergenic 15.0%
!! GTAATTAAATAAACAGAAAA+CGG + chr7_3:10669664-10669683 Msa1092830:intron 15.0%
!!! ATTTTTAAAACTTTGGAATA+AGG - chr7_3:10670119-10670138 None:intergenic 15.0%
!!! TATTCCAAAGTTTTAAAAAT+TGG + chr7_3:10670119-10670138 Msa1092830:intron 15.0%
!!! AGCTGATAAAAAATAATTTT+TGG + chr7_3:10670281-10670300 Msa1092830:intron 15.0%
!! GATAATAATAATCAATGTAT+AGG + chr7_3:10671473-10671492 Msa1092830:CDS 15.0%
!!! TTATACACTCATTAGATTTT+AGG - chr7_3:10666684-10666703 None:intergenic 20.0%
!!! GATTTATGAAACATTGATTA+AGG - chr7_3:10666744-10666763 None:intergenic 20.0%
!!! AATATGGTTTCAAACATTTT+AGG + chr7_3:10666772-10666791 Msa1092830:intron 20.0%
!!! GCACTTTTTTTTTTTTTTTG+AGG - chr7_3:10667003-10667022 None:intergenic 20.0%
!!! GGTTTGTATTATTTTTACAA+GGG + chr7_3:10667228-10667247 Msa1092830:intron 20.0%
!!! GTTTGTATTATTTTTACAAG+GGG + chr7_3:10667229-10667248 Msa1092830:intron 20.0%
!! TTATAGATAGATTTAGTACA+TGG - chr7_3:10667299-10667318 None:intergenic 20.0%
!! AATATATAACTAGAAAGTAG+AGG - chr7_3:10667442-10667461 None:intergenic 20.0%
!! AAAAAAACATACATATTTGG+TGG + chr7_3:10667723-10667742 Msa1092830:intron 20.0%
!!! TTCAATTGTTTTTTGAGATA+AGG - chr7_3:10667752-10667771 None:intergenic 20.0%
!! TATAGAAAAAGTAAAGAAGA+AGG + chr7_3:10667900-10667919 Msa1092830:intron 20.0%
!!! CTGAAATATTTTCTTAATCA+AGG - chr7_3:10668015-10668034 None:intergenic 20.0%
!!! TTTTCAACAAAAATGAAGTA+TGG - chr7_3:10668661-10668680 None:intergenic 20.0%
!!! AATTTTGAAAATGCTTGATT+TGG - chr7_3:10668851-10668870 None:intergenic 20.0%
!!! ATTCTAAAATAGAGTTGATA+AGG - chr7_3:10669152-10669171 None:intergenic 20.0%
!!! TATATTTTTGAACGGTAATA+TGG - chr7_3:10669371-10669390 None:intergenic 20.0%
!!! GACTGTATTTATTTAAAACA+AGG + chr7_3:10669425-10669444 Msa1092830:intron 20.0%
!! GCGTCAATATATAATAATTA+AGG - chr7_3:10669754-10669773 None:intergenic 20.0%
!! TTGACGCTTAATAAAATAAA+AGG + chr7_3:10669767-10669786 Msa1092830:intron 20.0%
!! TGACGCTTAATAAAATAAAA+GGG + chr7_3:10669768-10669787 Msa1092830:intron 20.0%
!! ATGTATATTTCAACAAAGAT+CGG + chr7_3:10669991-10670010 Msa1092830:intron 20.0%
!!! TGCATGTATACTTTTTTTTT+CGG - chr7_3:10671232-10671251 None:intergenic 20.0%
!!! ATTAATTTGCAAAAGAATGT+TGG - chr7_3:10671296-10671315 None:intergenic 20.0%
! TTGGAATAGTGTTTATAAAG+TGG + chr7_3:10667166-10667185 Msa1092830:intron 25.0%
! TGGAATAGTGTTTATAAAGT+GGG + chr7_3:10667167-10667186 Msa1092830:intron 25.0%
!!! GGGTTTGTATTATTTTTACA+AGG + chr7_3:10667227-10667246 Msa1092830:intron 25.0%
!! TTGTTGTTAAATAAAAGGAG+AGG - chr7_3:10667412-10667431 None:intergenic 25.0%
! ACCGTATATTTCATTCAAAT+CGG + chr7_3:10667538-10667557 Msa1092830:intron 25.0%
!!! ACCGATTTGAATGAAATATA+CGG - chr7_3:10667542-10667561 None:intergenic 25.0%
! AACATTCATAAACTAGATCT+AGG - chr7_3:10667602-10667621 None:intergenic 25.0%
!! TAGATCTAGTTTATGAATGT+TGG + chr7_3:10667601-10667620 Msa1092830:intron 25.0%
! AAATATGTTATTCATAGGGT+GGG - chr7_3:10667695-10667714 None:intergenic 25.0%
! TGTGTAGATTCATATTTCAT+TGG - chr7_3:10667837-10667856 None:intergenic 25.0%
! ATGAAATATGAATCTACACA+AGG + chr7_3:10667837-10667856 Msa1092830:intron 25.0%
! AAAAGAAAGACATGGATTTA+TGG + chr7_3:10667941-10667960 Msa1092830:intron 25.0%
!! TATACAAATCCAACTCTTTT+AGG - chr7_3:10667980-10667999 None:intergenic 25.0%
! TGGATTTGTATATGTCATTA+AGG + chr7_3:10667988-10668007 Msa1092830:intron 25.0%
! AAGTATAGAGAAAAATGAAG+AGG + chr7_3:10668211-10668230 Msa1092830:intron 25.0%
!!! AATCGCTTTACTTTTGTATT+TGG + chr7_3:10668254-10668273 Msa1092830:intron 25.0%
!!! ATCGCTTTACTTTTGTATTT+GGG + chr7_3:10668255-10668274 Msa1092830:intron 25.0%
! AAAATAAGTGTTAGCTAGAA+TGG + chr7_3:10668319-10668338 Msa1092830:intron 25.0%
! CAACATAAAAAGACTAGAAA+AGG + chr7_3:10668479-10668498 Msa1092830:intron 25.0%
! TTTGTCAAAGTTAAGTTAGT+TGG - chr7_3:10669072-10669091 None:intergenic 25.0%
! TGGTAAATGATATTTGAGAA+AGG - chr7_3:10669351-10669370 None:intergenic 25.0%
! GACGCTTAATAAAATAAAAG+GGG + chr7_3:10669769-10669788 Msa1092830:intron 25.0%
! ACGCTTAATAAAATAAAAGG+GGG + chr7_3:10669770-10669789 Msa1092830:intron 25.0%
!!! GAATATTTTTGAACTTGAAG+AGG + chr7_3:10669907-10669926 Msa1092830:intron 25.0%
!!! TTAAAACTTTGGAATAAGGT+TGG - chr7_3:10670115-10670134 None:intergenic 25.0%
!!! AGGTCCAATTTTTAAAACTT+TGG - chr7_3:10670126-10670145 None:intergenic 25.0%
!! ATCAGTTTATTTGGTTCAAT+CGG + chr7_3:10670150-10670169 Msa1092830:intron 25.0%
! ATCAAGCAATTGAGTTTAAA+TGG + chr7_3:10670220-10670239 Msa1092830:intron 25.0%
!! AATCATTTGAAACAACCTAA+TGG + chr7_3:10670421-10670440 Msa1092830:intron 25.0%
! CTTAGAAAAAGAAACTATTG+GGG - chr7_3:10670543-10670562 None:intergenic 25.0%
! CCTTAGAAAAAGAAACTATT+GGG - chr7_3:10670544-10670563 None:intergenic 25.0%
! ACCTTAGAAAAAGAAACTAT+TGG - chr7_3:10670545-10670564 None:intergenic 25.0%
! TAAGAGAAAGAAATTGTAGT+AGG - chr7_3:10670682-10670701 None:intergenic 25.0%
! CAATACATACTACAAAAAGT+TGG + chr7_3:10670706-10670725 Msa1092830:intron 25.0%
! AAAGGTAAAAGTTATGAATG+TGG - chr7_3:10670887-10670906 None:intergenic 25.0%
! AGAGCAAGTAAAAAAAGTAA+AGG - chr7_3:10670905-10670924 None:intergenic 25.0%
! GATTTATAGCTTCTTTAGTT+AGG + chr7_3:10671108-10671127 Msa1092830:intron 25.0%
! GATAAGTAAAAACTGATCAA+GGG - chr7_3:10671170-10671189 None:intergenic 25.0%
! AGATAAGTAAAAACTGATCA+AGG - chr7_3:10671171-10671190 None:intergenic 25.0%
! GAATGTTGGAAATATAGAAT+TGG - chr7_3:10671282-10671301 None:intergenic 25.0%
! GTAGTTCTTTATCTCATTAT+CGG - chr7_3:10671369-10671388 None:intergenic 25.0%
! ATAATGAGATAAAGAACTAC+TGG + chr7_3:10671369-10671388 Msa1092830:CDS 25.0%
ATCAACTATATTGCCAATCA+TGG + chr7_3:10666501-10666520 Msa1092830:CDS 30.0%
TTAAAAAGAATGACCTAGCT+TGG + chr7_3:10666711-10666730 Msa1092830:intron 30.0%
!! ATTTTAGGTCTTAAACGTAC+CGG + chr7_3:10666787-10666806 Msa1092830:intron 30.0%
AATAGTGTTTATAAAGTGGG+AGG + chr7_3:10667170-10667189 Msa1092830:intron 30.0%
ATAGTGTTTATAAAGTGGGA+GGG + chr7_3:10667171-10667190 Msa1092830:intron 30.0%
TGAGAATAGTTGCAATACTT+TGG + chr7_3:10667205-10667224 Msa1092830:intron 30.0%
GAGAATAGTTGCAATACTTT+GGG + chr7_3:10667206-10667225 Msa1092830:intron 30.0%
AGAATAGTTGCAATACTTTG+GGG + chr7_3:10667207-10667226 Msa1092830:intron 30.0%
GTATATTTCATTCAAATCGG+TGG + chr7_3:10667541-10667560 Msa1092830:intron 30.0%
! CATAAACTAGATCTAGGATA+TGG - chr7_3:10667596-10667615 None:intergenic 30.0%
AATATGTTATTCATAGGGTG+GGG - chr7_3:10667694-10667713 None:intergenic 30.0%
CAAATATGTTATTCATAGGG+TGG - chr7_3:10667696-10667715 None:intergenic 30.0%
CACCCTATGAATAACATATT+TGG + chr7_3:10667694-10667713 Msa1092830:intron 30.0%
GGCCAAATATGTTATTCATA+GGG - chr7_3:10667699-10667718 None:intergenic 30.0%
AGGCCAAATATGTTATTCAT+AGG - chr7_3:10667700-10667719 None:intergenic 30.0%
CGATGATAAAAAGAAAGACA+TGG + chr7_3:10667933-10667952 Msa1092830:intron 30.0%
! GAATCCATTTTCAATAAGGT+GGG - chr7_3:10668125-10668144 None:intergenic 30.0%
! TGAATCCATTTTCAATAAGG+TGG - chr7_3:10668126-10668145 None:intergenic 30.0%
! GAGTGAATCCATTTTCAATA+AGG - chr7_3:10668129-10668148 None:intergenic 30.0%
!! GCTTCTAAAGCCAAAATATA+GGG + chr7_3:10668159-10668178 Msa1092830:intron 30.0%
!!! TGTTTTTTCTTTGTAGAGGT+AGG - chr7_3:10668295-10668314 None:intergenic 30.0%
!!! GTCTTGTTTTTTCTTTGTAG+AGG - chr7_3:10668299-10668318 None:intergenic 30.0%
AGCTAGAATGGATAAACAAA+AGG + chr7_3:10668331-10668350 Msa1092830:intron 30.0%
GCTAGAATGGATAAACAAAA+GGG + chr7_3:10668332-10668351 Msa1092830:intron 30.0%
GAGAAAAATTAGGGCAAAAA+AGG + chr7_3:10668372-10668391 Msa1092830:intron 30.0%
GATGTAAAAGTCATACTGAA+TGG - chr7_3:10668457-10668476 None:intergenic 30.0%
TGGTTTCTCTCTAAATCTAT+CGG - chr7_3:10668599-10668618 None:intergenic 30.0%
AACAAAAATGAAGTATGGTG+GGG - chr7_3:10668656-10668675 None:intergenic 30.0%
CAACAAAAATGAAGTATGGT+GGG - chr7_3:10668657-10668676 None:intergenic 30.0%
TCAACAAAAATGAAGTATGG+TGG - chr7_3:10668658-10668677 None:intergenic 30.0%
! ACGAGAAACAACTTTGAAAA+GGG - chr7_3:10668731-10668750 None:intergenic 30.0%
AAAAAGGAGTGAAAACTAGA+CGG + chr7_3:10668795-10668814 Msa1092830:intron 30.0%
!!! TCTCTCTCTTTTTAAGTACT+CGG - chr7_3:10668988-10669007 None:intergenic 30.0%
AACCGGATATGTTATATGTT+AGG + chr7_3:10669011-10669030 Msa1092830:intron 30.0%
CTCCTAACATATAACATATC+CGG - chr7_3:10669016-10669035 None:intergenic 30.0%
TCAAAGTTAAGTTAGTTGGT+GGG - chr7_3:10669068-10669087 None:intergenic 30.0%
AGTCAATGATAAAGATAGGA+TGG - chr7_3:10669115-10669134 None:intergenic 30.0%
ATGCAGTCAATGATAAAGAT+AGG - chr7_3:10669119-10669138 None:intergenic 30.0%
! TATCTTTATCATTGACTGCA+TGG + chr7_3:10669118-10669137 Msa1092830:intron 30.0%
AATCAGATAATGACAAGTTG+AGG + chr7_3:10669248-10669267 Msa1092830:intron 30.0%
! TTGAGGTACTATATAGGTTT+AGG + chr7_3:10669265-10669284 Msa1092830:intron 30.0%
ATATTTGAGAAAGGTAGTCA+GGG - chr7_3:10669342-10669361 None:intergenic 30.0%
!! TAATGACTTTGCTTTGAAGA+AGG - chr7_3:10669934-10669953 None:intergenic 30.0%
TTGAACCAAATAAACTGATG+CGG - chr7_3:10670149-10670168 None:intergenic 30.0%
! TTTTTCTCCTTAAAACTGGA+GGG + chr7_3:10670347-10670366 Msa1092830:intron 30.0%
TTGAAACAACCTAATGGAAT+CGG + chr7_3:10670427-10670446 Msa1092830:intron 30.0%
!! TATTTGGTTCAAGTTGAAAC+GGG - chr7_3:10670491-10670510 None:intergenic 30.0%
!! CTATTTGGTTCAAGTTGAAA+CGG - chr7_3:10670492-10670511 None:intergenic 30.0%
! CCCAATAGTTTCTTTTTCTA+AGG + chr7_3:10670541-10670560 Msa1092830:intron 30.0%
! ACAAAAAGTTGGTTTATCGA+CGG + chr7_3:10670717-10670736 Msa1092830:intron 30.0%
TAAAAGTTATGAATGTGGCT+GGG - chr7_3:10670882-10670901 None:intergenic 30.0%
!!! ATTAACCATCTGGTTTTAAG+CGG - chr7_3:10671208-10671227 None:intergenic 30.0%
!!! TTTTTTCGGTATTAACCATC+TGG - chr7_3:10671218-10671237 None:intergenic 30.0%
!!! GATTTCTAGTTTTAAGTGTC+TGG - chr7_3:10671260-10671279 None:intergenic 30.0%
AATTAATCATTCACCAATGC+AGG + chr7_3:10671309-10671328 Msa1092830:intron 30.0%
GAAAATCGCAAAACATTTAC+CGG + chr7_3:10671337-10671356 Msa1092830:CDS 30.0%
AAAATCGCAAAACATTTACC+GGG + chr7_3:10671338-10671357 Msa1092830:CDS 30.0%
TTGATTGATCAGAGATTGTA+GGG - chr7_3:10671604-10671623 None:intergenic 30.0%
! AATCAAGTTGTTCTAACTAC+TGG + chr7_3:10671618-10671637 Msa1092830:CDS 30.0%
TATATTGCCAATCATGGTGA+AGG + chr7_3:10666507-10666526 Msa1092830:CDS 35.0%
TCATTGAACTTCATGCTAAG+TGG + chr7_3:10666893-10666912 Msa1092830:CDS 35.0%
CATTGAACTTCATGCTAAGT+GGG + chr7_3:10666894-10666913 Msa1092830:CDS 35.0%
ATTGAACTTCATGCTAAGTG+GGG + chr7_3:10666895-10666914 Msa1092830:CDS 35.0%
ATGAGCTTGTAGTATACTCT+TGG + chr7_3:10667147-10667166 Msa1092830:intron 35.0%
AACTGTCTGTGAAAAGTTTC+AGG + chr7_3:10667565-10667584 Msa1092830:intron 35.0%
CTAGTTTATGAATGTTGGTG+AGG + chr7_3:10667606-10667625 Msa1092830:intron 35.0%
ATATGTTATTCATAGGGTGG+GGG - chr7_3:10667693-10667712 None:intergenic 35.0%
TTTCTTCCGTTCGATATGAT+CGG - chr7_3:10667875-10667894 None:intergenic 35.0%
AATGAGAAGCCTAAAAGAGT+TGG + chr7_3:10667968-10667987 Msa1092830:intron 35.0%
!! CGCTTCTAAAGCCAAAATAT+AGG + chr7_3:10668158-10668177 Msa1092830:intron 35.0%
TAAAGCCAAAATATAGGGTC+AGG + chr7_3:10668164-10668183 Msa1092830:intron 35.0%
! TTTTCTTTGTAGAGGTAGGA+AGG - chr7_3:10668291-10668310 None:intergenic 35.0%
AAAAGGCTTCACAAAGAAGA+TGG + chr7_3:10668496-10668515 Msa1092830:intron 35.0%
AATCCTCTACAACTGCAATA+TGG + chr7_3:10668556-10668575 Msa1092830:intron 35.0%
!! CAATATGGTGTTGCAATTGT+AGG + chr7_3:10668571-10668590 Msa1092830:intron 35.0%
ACAAAAATGAAGTATGGTGG+GGG - chr7_3:10668655-10668674 None:intergenic 35.0%
! CACGAGAAACAACTTTGAAA+AGG - chr7_3:10668732-10668751 None:intergenic 35.0%
CGTTTACATGGCGATTTATA+GGG - chr7_3:10668961-10668980 None:intergenic 35.0%
TCGTTTACATGGCGATTTAT+AGG - chr7_3:10668962-10668981 None:intergenic 35.0%
TAAAAAGAGAGAGAGAGAAC+CGG + chr7_3:10668994-10669013 Msa1092830:intron 35.0%
! CAAAGTTAAGTTAGTTGGTG+GGG - chr7_3:10669067-10669086 None:intergenic 35.0%
GTCAAAGTTAAGTTAGTTGG+TGG - chr7_3:10669069-10669088 None:intergenic 35.0%
! GACAAGTTGAGGTACTATAT+AGG + chr7_3:10669259-10669278 Msa1092830:intron 35.0%
! TATAGGTTTAGGATCCTCAT+AGG + chr7_3:10669276-10669295 Msa1092830:intron 35.0%
! ATAGGTTTAGGATCCTCATA+GGG + chr7_3:10669277-10669296 Msa1092830:intron 35.0%
GATATTTGAGAAAGGTAGTC+AGG - chr7_3:10669343-10669362 None:intergenic 35.0%
TTTATCTCTCCATGTAGCAA+AGG + chr7_3:10669954-10669973 Msa1092830:intron 35.0%
AACGGCTAAGAATAAAAGCA+AGG - chr7_3:10670029-10670048 None:intergenic 35.0%
TTATTCTTAGCCGTTGAACA+TGG + chr7_3:10670034-10670053 Msa1092830:intron 35.0%
! CTAGTATTTAAAGCTGCCAA+TGG - chr7_3:10670087-10670106 None:intergenic 35.0%
TCTCAAACGATTCATCATAG+AGG - chr7_3:10670260-10670279 None:intergenic 35.0%
CAATCAGTTGTTGGATTGTA+AGG - chr7_3:10670319-10670338 None:intergenic 35.0%
! CGTCTTTTTCTCCTTAAAAC+TGG + chr7_3:10670343-10670362 Msa1092830:intron 35.0%
! CTTTTTCTCCTTAAAACTGG+AGG + chr7_3:10670346-10670365 Msa1092830:intron 35.0%
! ACAATTGAACCGATTCCATT+AGG - chr7_3:10670439-10670458 None:intergenic 35.0%
ACCAAATAGTTGAACCAATC+CGG + chr7_3:10670503-10670522 Msa1092830:intron 35.0%
!! CGTAGTGTAATTTTAGTGCA+AGG - chr7_3:10670583-10670602 None:intergenic 35.0%
GAGAAAGAAATTGTAGTAGG+TGG - chr7_3:10670679-10670698 None:intergenic 35.0%
GTAAAAGTTATGAATGTGGC+TGG - chr7_3:10670883-10670902 None:intergenic 35.0%
TTTCATCCATATATCGGACA+AGG - chr7_3:10671144-10671163 None:intergenic 35.0%
! GGGTTGTTTCATCCATATAT+CGG - chr7_3:10671150-10671169 None:intergenic 35.0%
ATTTACCGCTTAAAACCAGA+TGG + chr7_3:10671200-10671219 Msa1092830:intron 35.0%
ATGAGATAAAGAACTACTGG+AGG + chr7_3:10671372-10671391 Msa1092830:CDS 35.0%
GTTCAGCAATGTTGGAAATT+TGG - chr7_3:10671508-10671527 None:intergenic 35.0%
! GAGATAATATTGGTGTCCAT+AGG - chr7_3:10671530-10671549 None:intergenic 35.0%
TCCAAAATTCCTTGGTAAGA+GGG - chr7_3:10671557-10671576 None:intergenic 35.0%
TTCCAAAATTCCTTGGTAAG+AGG - chr7_3:10671558-10671577 None:intergenic 35.0%
GAAATGGTTCCAAAATTCCT+TGG - chr7_3:10671565-10671584 None:intergenic 35.0%
! AACTGATGATGAGTTGGAAA+TGG - chr7_3:10671581-10671600 None:intergenic 35.0%
CTTGATTGATCAGAGATTGT+AGG - chr7_3:10671605-10671624 None:intergenic 35.0%
TTGTCACTGCAACTACTAAA+TGG + chr7_3:10671656-10671675 Msa1092830:CDS 35.0%
ACAAGATCCTGATGTACGAA+AGG + chr7_3:10666446-10666465 Msa1092830:CDS 40.0%
CAAGATCCTGATGTACGAAA+GGG + chr7_3:10666447-10666466 Msa1092830:CDS 40.0%
AAGTCTTCTTCCATTGTCCA+AGG - chr7_3:10666474-10666493 None:intergenic 40.0%
ATTACCAGCAGATTTAGCCA+AGG - chr7_3:10666544-10666563 None:intergenic 40.0%
TCGTGCATAAGTGCTTTGTA+TGG + chr7_3:10666653-10666672 Msa1092830:intron 40.0%
AAAGAATGACCTAGCTTGGT+AGG + chr7_3:10666715-10666734 Msa1092830:intron 40.0%
AAGAATGACCTAGCTTGGTA+GGG + chr7_3:10666716-10666735 Msa1092830:intron 40.0%
ATATTCCCTCGTCTAACATC+AGG - chr7_3:10666850-10666869 None:intergenic 40.0%
ATGATCAAGAGTTGTTCCTC+AGG - chr7_3:10666877-10666896 None:intergenic 40.0%
! TGAATGTTGGTGAGGTTTGT+TGG + chr7_3:10667614-10667633 Msa1092830:intron 40.0%
! GAATGTTGGTGAGGTTTGTT+GGG + chr7_3:10667615-10667634 Msa1092830:intron 40.0%
AAACTGCCGATCATATCGAA+CGG + chr7_3:10667866-10667885 Msa1092830:intron 40.0%
CATCTGTTGTAGAGGATCAT+TGG + chr7_3:10668086-10668105 Msa1092830:intron 40.0%
CACACCCACCTTATTGAAAA+TGG + chr7_3:10668118-10668137 Msa1092830:intron 40.0%
ACACCATATTGCAGTTGTAG+AGG - chr7_3:10668562-10668581 None:intergenic 40.0%
! CAAAAATGAAGTATGGTGGG+GGG - chr7_3:10668654-10668673 None:intergenic 40.0%
ATCCAATGACCATGACATTG+AGG - chr7_3:10669042-10669061 None:intergenic 40.0%
TAGCTGGTTGTCTATAGGAA+AGG - chr7_3:10669313-10669332 None:intergenic 40.0%
! TGACCCTCTATTTTCCAACT+AGG + chr7_3:10669560-10669579 Msa1092830:intron 40.0%
GTGCCTAGTTGGAAAATAGA+GGG - chr7_3:10669566-10669585 None:intergenic 40.0%
TGTGCCTAGTTGGAAAATAG+AGG - chr7_3:10669567-10669586 None:intergenic 40.0%
ATACAAAACGTGTGCCTAGT+TGG - chr7_3:10669577-10669596 None:intergenic 40.0%
! ACTAGGCACACGTTTTGTAT+AGG + chr7_3:10669577-10669596 Msa1092830:intron 40.0%
AACCAAATGCTTTCTACCTG+AGG + chr7_3:10669867-10669886 Msa1092830:intron 40.0%
!! GCTTGTTTTCCTTTGCTACA+TGG - chr7_3:10669966-10669985 None:intergenic 40.0%
GTATCTGATTGAGAGGTTTG+AGG - chr7_3:10670060-10670079 None:intergenic 40.0%
TCAATCAGATACACTGCCAT+TGG + chr7_3:10670068-10670087 Msa1092830:intron 40.0%
AACCAAATAAACTGATGCGG+AGG - chr7_3:10670146-10670165 None:intergenic 40.0%
TGGTTCAATCGGTTGAACTA+TGG + chr7_3:10670161-10670180 Msa1092830:intron 40.0%
AGACGCTAACAATCAGTTGT+TGG - chr7_3:10670328-10670347 None:intergenic 40.0%
! GTTTGAACCCTCCAGTTTTA+AGG - chr7_3:10670357-10670376 None:intergenic 40.0%
AAACCAACCGATAAACTAGC+CGG + chr7_3:10670463-10670482 Msa1092830:intron 40.0%
!! ACCGGATTGGTTCAACTATT+TGG - chr7_3:10670507-10670526 None:intergenic 40.0%
TAGTGTTGTCAAAACCGGAT+TGG - chr7_3:10670520-10670539 None:intergenic 40.0%
GGTGGCATGGTTATAAATTG+AGG - chr7_3:10670661-10670680 None:intergenic 40.0%
AGAAATTGTAGTAGGTGGCA+TGG - chr7_3:10670674-10670693 None:intergenic 40.0%
TGTGTGCAGTGAGAAAAGTA+AGG - chr7_3:10670834-10670853 None:intergenic 40.0%
TAATCATTCACCAATGCAGG+TGG + chr7_3:10671312-10671331 Msa1092830:intron 40.0%
!! ATCTCATTATCGGTTCTTCC+CGG - chr7_3:10671359-10671378 None:intergenic 40.0%
TAAAGAACTACTGGAGGACA+AGG + chr7_3:10671378-10671397 Msa1092830:CDS 40.0%
!! CAGCTTGCTTGATATGCTTT+TGG - chr7_3:10671406-10671425 None:intergenic 40.0%
AACTCTCAATCTCAAGAGCA+AGG + chr7_3:10671428-10671447 Msa1092830:CDS 40.0%
TTCCAACATTGCTGAACCTA+TGG + chr7_3:10671511-10671530 Msa1092830:CDS 40.0%
AGAGGGTGGTGAGATAATAT+TGG - chr7_3:10671540-10671559 None:intergenic 40.0%
AAAATTCCTTGGTAAGAGGG+TGG - chr7_3:10671554-10671573 None:intergenic 40.0%
! ACCCTCTTACCAAGGAATTT+TGG + chr7_3:10671553-10671572 Msa1092830:CDS 40.0%
TTGTTCTAACTACTGGAGCA+TGG + chr7_3:10671625-10671644 Msa1092830:CDS 40.0%
CCAAACACCTTCACCATGAT+TGG - chr7_3:10666517-10666536 None:intergenic 45.0%
!! CCAATCATGGTGAAGGTGTT+TGG + chr7_3:10666514-10666533 Msa1092830:CDS 45.0%
!! TGAAGGTGTTTGGAACTCCT+TGG + chr7_3:10666524-10666543 Msa1092830:CDS 45.0%
AACTCCTTGGCTAAATCTGC+TGG + chr7_3:10666537-10666556 Msa1092830:CDS 45.0%
! TTAAGGTACCCTACCAAGCT+AGG - chr7_3:10666727-10666746 None:intergenic 45.0%
TTCGACCTGATGTTAGACGA+GGG + chr7_3:10666842-10666861 Msa1092830:CDS 45.0%
ACGAGGGAATATTACACCTG+AGG + chr7_3:10666858-10666877 Msa1092830:CDS 45.0%
TTCATGCTAAGTGGGGAAAC+AGG + chr7_3:10666902-10666921 Msa1092830:CDS 45.0%
GCATCGTGTTGTGGTTATAG+AGG - chr7_3:10668067-10668086 None:intergenic 45.0%
ACAACAGATGCATCGTGTTG+TGG - chr7_3:10668076-10668095 None:intergenic 45.0%
ACACGATGCATCTGTTGTAG+AGG + chr7_3:10668078-10668097 Msa1092830:intron 45.0%
! CTCGTCCTGACCCTATATTT+TGG - chr7_3:10668172-10668191 None:intergenic 45.0%
GTACTCGGTTCTCGTTTACA+TGG - chr7_3:10668973-10668992 None:intergenic 45.0%
AGCCTCAATGTCATGGTCAT+TGG + chr7_3:10669037-10669056 Msa1092830:intron 45.0%
TTTGAGAAAGGTAGTCAGGG+TGG - chr7_3:10669339-10669358 None:intergenic 45.0%
!! TGCCTCAGGTAGAAAGCATT+TGG - chr7_3:10669872-10669891 None:intergenic 45.0%
! AGGTTTGAGGCCATGTTCAA+CGG - chr7_3:10670047-10670066 None:intergenic 45.0%
TGGCAGTGTATCTGATTGAG+AGG - chr7_3:10670067-10670086 None:intergenic 45.0%
GACCTCCGCATCAGTTTATT+TGG + chr7_3:10670141-10670160 Msa1092830:intron 45.0%
!! GTTCAAGTTGAAACGGGAAC+CGG - chr7_3:10670485-10670504 None:intergenic 45.0%
TGGGGTAGTGTTGTCAAAAC+CGG - chr7_3:10670525-10670544 None:intergenic 45.0%
TTTAAGTATGCCCGCCCTAA+CGG + chr7_3:10670936-10670955 Msa1092830:intron 45.0%
! TATGCCAACTTGTGCCGTTA+GGG - chr7_3:10670953-10670972 None:intergenic 45.0%
! TTATGCCAACTTGTGCCGTT+AGG - chr7_3:10670954-10670973 None:intergenic 45.0%
AGTCGTCCTTGTCCGATATA+TGG + chr7_3:10671135-10671154 Msa1092830:intron 45.0%
GTCCATAGGTTCAGCAATGT+TGG - chr7_3:10671516-10671535 None:intergenic 45.0%
! GTAGGGAACTGATGATGAGT+TGG - chr7_3:10671587-10671606 None:intergenic 45.0%
!!! TATAAATTTCTTATTTTTAT+TGG - chr7_3:10667641-10667660 None:intergenic 5.0%
!!! TTTTTTTTATTATTTAAGAA+AGG - chr7_3:10668876-10668895 None:intergenic 5.0%
!!! TAAATATATATATTTTTGAA+CGG - chr7_3:10669379-10669398 None:intergenic 5.0%
!!! AAAAATAGTTATTTTTAATA+TGG - chr7_3:10669402-10669421 None:intergenic 5.0%
!!! TTTATTTTTTTTATAAGAAA+AGG - chr7_3:10669619-10669638 None:intergenic 5.0%
CAAGGTCCCTTTCGTACATC+AGG - chr7_3:10666456-10666475 None:intergenic 50.0%
CTGATGTACGAAAGGGACCT+TGG + chr7_3:10666454-10666473 Msa1092830:CDS 50.0%
ACGAAAGGGACCTTGGACAA+TGG + chr7_3:10666461-10666480 Msa1092830:CDS 50.0%
CCGAAGTCTGCAACTCTTTC+CGG - chr7_3:10666809-10666828 None:intergenic 50.0%
CCGGAAAGAGTTGCAGACTT+CGG + chr7_3:10666806-10666825 Msa1092830:CDS 50.0%
GAAAGAGTTGCAGACTTCGG+TGG + chr7_3:10666809-10666828 Msa1092830:CDS 50.0%
CTTCGACCTGATGTTAGACG+AGG + chr7_3:10666841-10666860 Msa1092830:CDS 50.0%
!! GGCTTTAGAAGCGACATGCA+AGG - chr7_3:10668151-10668170 None:intergenic 50.0%
! AAATGAAGTATGGTGGGGGG+TGG - chr7_3:10668651-10668670 None:intergenic 50.0%
TAGGAGCAGCCTCAATGTCA+TGG + chr7_3:10669030-10669049 Msa1092830:intron 50.0%
AGGAACAAGTACGCCCTATG+AGG - chr7_3:10669293-10669312 None:intergenic 50.0%
GGAGCTAGCTGGTTGTCTAT+AGG - chr7_3:10669318-10669337 None:intergenic 50.0%
CTTTCTACCTGAGGCATGCA+TGG + chr7_3:10669876-10669895 Msa1092830:intron 50.0%
GATTTCTCCATGCATGCCTC+AGG - chr7_3:10669886-10669905 None:intergenic 50.0%
!! GAACCGGCTAGTTTATCGGT+TGG - chr7_3:10670469-10670488 None:intergenic 50.0%
!! ACGGGAACCGGCTAGTTTAT+CGG - chr7_3:10670473-10670492 None:intergenic 50.0%
GAATGTGGCTGGGTTTGTGA+TGG - chr7_3:10670872-10670891 None:intergenic 50.0%
! CGATTTTCGACCACCTGCAT+TGG - chr7_3:10671325-10671344 None:intergenic 50.0%
ATCTCACCACCCTCTTACCA+AGG + chr7_3:10671545-10671564 Msa1092830:CDS 50.0%
GTGGGGGGTGAGAACTCTAG+TGG - chr7_3:10668619-10668638 None:intergenic 60.0%
! TGAAGTATGGTGGGGGGTGG+TGG - chr7_3:10668648-10668667 None:intergenic 60.0%
GTAGTCAGGGTGGAGCTAGC+TGG - chr7_3:10669329-10669348 None:intergenic 60.0%
! CCAACTTGTGCCGTTAGGGC+GGG - chr7_3:10670949-10670968 None:intergenic 60.0%
! GCCAACTTGTGCCGTTAGGG+CGG - chr7_3:10670950-10670969 None:intergenic 60.0%
! GTATGGTGGGGGGTGGTGGT+GGG - chr7_3:10668644-10668663 None:intergenic 65.0%
! AGTATGGTGGGGGGTGGTGG+TGG - chr7_3:10668645-10668664 None:intergenic 65.0%
CCCGCCCTAACGGCACAAGT+TGG + chr7_3:10670946-10670965 Msa1092830:intron 65.0%
!! GGGTGGTGGTGGGAGGTGGG+GGG - chr7_3:10668634-10668653 None:intergenic 75.0%
!! GGGGTGGTGGTGGGAGGTGG+GGG - chr7_3:10668635-10668654 None:intergenic 75.0%
!! GGGGGTGGTGGTGGGAGGTG+GGG - chr7_3:10668636-10668655 None:intergenic 75.0%
!! GGGGGGTGGTGGTGGGAGGT+GGG - chr7_3:10668637-10668656 None:intergenic 75.0%
!! TGGGGGGTGGTGGTGGGAGG+TGG - chr7_3:10668638-10668657 None:intergenic 75.0%
!! TGGTGGGGGGTGGTGGTGGG+AGG - chr7_3:10668641-10668660 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 10666420 10671685 10666420 ID=Msa1092830;Name=Msa1092830
chr7_3 mRNA 10666420 10671685 10666420 ID=Msa1092830-mRNA-1;Parent=Msa1092830;Name=Msa1092830-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|1|1|1|3|0|207
chr7_3 exon 10666420 10666558 10666420 ID=Msa1092830-mRNA-1:exon:2798;Parent=Msa1092830-mRNA-1
chr7_3 exon 10666794 10666923 10666794 ID=Msa1092830-mRNA-1:exon:2799;Parent=Msa1092830-mRNA-1
chr7_3 exon 10671331 10671685 10671331 ID=Msa1092830-mRNA-1:exon:2800;Parent=Msa1092830-mRNA-1
chr7_3 CDS 10666420 10666558 10666420 ID=Msa1092830-mRNA-1:cds;Parent=Msa1092830-mRNA-1
chr7_3 CDS 10666794 10666923 10666794 ID=Msa1092830-mRNA-1:cds;Parent=Msa1092830-mRNA-1
chr7_3 CDS 10671331 10671685 10671331 ID=Msa1092830-mRNA-1:cds;Parent=Msa1092830-mRNA-1
Gene Sequence

>Msa1092830

ATGGACAAAAAAGAGTGCAGTTCTTCACAAGATCCTGATGTACGAAAGGGACCTTGGACAATGGAAGAAGACTTGATCTTGATCAACTATATTGCCAATCATGGTGAAGGTGTTTGGAACTCCTTGGCTAAATCTGCTGGTCTTAAACGTACCGGAAAGAGTTGCAGACTTCGGTGGCTAAACTATCTTCGACCTGATGTTAGACGAGGGAATATTACACCTGAGGAACAACTCTTGATCATTGAACTTCATGCTAAGTGGGGAAACAGGTGGTCGAAAATCGCAAAACATTTACCGGGAAGAACCGATAATGAGATAAAGAACTACTGGAGGACAAGGATCCAAAAGCATATCAAGCAAGCTGAGAACTCTCAATCTCAAGAGCAAGGTTCTGATATTCAAATAAATGATGATAATAATAATCAATGTATAGGAAGCACAAGCCAAATTTCCAACATTGCTGAACCTATGGACACCAATATTATCTCACCACCCTCTTACCAAGGAATTTTGGAACCATTTCCAACTCATCATCAGTTCCCTACAATCTCTGATCAATCAAGTTGTTCTAACTACTGGAGCATGGAAGATCTCTTGTCACTGCAACTACTAAATGGTGATTAA
Protein sequence

>Msa1092830

MDKKECSSSQDPDVRKGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIIELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKHIKQAENSQSQEQGSDIQINDDNNNQCIGSTSQISNIAEPMDTNIISPPSYQGILEPFPTHHQFPTISDQSSCSNYWSMEDLLSLQLLNGD*