Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1093210 | XP_013448091.1 | 81.156 | 467 | 31 | 4 | 11 | 422 | 37 | 501 | 0.0 | 721 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1093210 | sp|Q6NQK2|NAC8_ARATH | 36.028 | 433 | 233 | 11 | 3 | 412 | 27 | 438 | 1.23e-71 | 235 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1093210 | A0A072TZ22 | 81.156 | 467 | 31 | 4 | 11 | 422 | 37 | 501 | 0.0 | 721 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1093210 | TF | NAC |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1093210 | MtrunA17_Chr7g0227071 | 81.156 | 467 | 31 | 4 | 11 | 422 | 37 | 501 | 0.0 | 721 |
| Msa1093210 | MtrunA17_Chr5g0422431 | 37.674 | 430 | 225 | 9 | 6 | 415 | 30 | 436 | 1.13e-83 | 263 |
| Msa1093210 | MtrunA17_Chr1g0198751 | 51.316 | 228 | 101 | 3 | 9 | 228 | 33 | 258 | 1.61e-75 | 243 |
| Msa1093210 | MtrunA17_Chr2g0282871 | 51.961 | 204 | 89 | 3 | 25 | 222 | 48 | 248 | 1.31e-64 | 209 |
| Msa1093210 | MtrunA17_Chr4g0046431 | 58.333 | 168 | 65 | 2 | 25 | 190 | 63 | 227 | 9.75e-63 | 205 |
| Msa1093210 | MtrunA17_Chr4g0040541 | 52.941 | 187 | 88 | 0 | 25 | 211 | 43 | 229 | 3.10e-62 | 202 |
| Msa1093210 | MtrunA17_Chr8g0367761 | 59.146 | 164 | 62 | 2 | 25 | 186 | 63 | 223 | 3.44e-61 | 199 |
| Msa1093210 | MtrunA17_Chr8g0389661 | 56.725 | 171 | 68 | 2 | 26 | 190 | 43 | 213 | 1.05e-58 | 199 |
| Msa1093210 | MtrunA17_Chr2g0324961 | 51.892 | 185 | 88 | 1 | 26 | 210 | 45 | 228 | 2.32e-54 | 182 |
| Msa1093210 | MtrunA17_Chr1g0198741 | 47.518 | 141 | 69 | 2 | 88 | 224 | 10 | 149 | 1.02e-35 | 133 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1093210 | AT1G25580.1 | 36.028 | 433 | 233 | 11 | 3 | 412 | 27 | 438 | 1.26e-72 | 235 |
| Msa1093210 | AT5G14490.2 | 53.571 | 196 | 88 | 3 | 21 | 216 | 46 | 238 | 2.05e-66 | 213 |
| Msa1093210 | AT5G14490.4 | 53.571 | 196 | 88 | 3 | 21 | 216 | 46 | 238 | 2.76e-66 | 215 |
| Msa1093210 | AT5G14490.1 | 53.571 | 196 | 88 | 3 | 21 | 216 | 49 | 241 | 3.14e-66 | 215 |
| Msa1093210 | AT5G14490.3 | 53.571 | 196 | 88 | 3 | 21 | 216 | 49 | 241 | 5.12e-66 | 215 |
| Msa1093210 | AT3G01600.1 | 50.980 | 204 | 92 | 3 | 11 | 214 | 37 | 232 | 2.84e-62 | 205 |
| Msa1093210 | AT4G29230.3 | 55.814 | 172 | 69 | 1 | 26 | 190 | 44 | 215 | 5.56e-61 | 204 |
| Msa1093210 | AT4G28500.1 | 52.273 | 176 | 84 | 0 | 26 | 201 | 55 | 230 | 1.18e-60 | 199 |
| Msa1093210 | AT4G29230.2 | 55.814 | 172 | 69 | 1 | 26 | 190 | 43 | 214 | 1.30e-60 | 205 |
| Msa1093210 | AT4G29230.1 | 55.814 | 172 | 69 | 1 | 26 | 190 | 44 | 215 | 1.30e-60 | 205 |
| Msa1093210 | AT1G28470.1 | 52.151 | 186 | 81 | 3 | 26 | 208 | 73 | 253 | 5.31e-60 | 198 |
| Msa1093210 | AT5G56620.3 | 50.270 | 185 | 78 | 4 | 18 | 190 | 31 | 213 | 3.22e-55 | 188 |
| Msa1093210 | AT5G56620.2 | 50.270 | 185 | 78 | 4 | 18 | 190 | 31 | 213 | 4.28e-55 | 187 |
| Msa1093210 | AT5G56620.1 | 50.270 | 185 | 78 | 4 | 18 | 190 | 31 | 213 | 1.11e-54 | 186 |
Find 119 sgRNAs with CRISPR-Local
Find 343 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCGGTGGATTTGGAGGATT+TGG | 0.165293 | 7_3:+12738709 | None:intergenic |
| TTTCCTGTACGCGGTGGATT+TGG | 0.270486 | 7_3:+12738700 | None:intergenic |
| TGCCCCGCAATTTGATATTC+AGG | 0.273298 | 7_3:-12738075 | Msa1093210:CDS |
| TCCTTCTGATGTGGAAATAT+TGG | 0.291101 | 7_3:-12740228 | Msa1093210:CDS |
| TGCCATGCAATCTGATATTC+AGG | 0.303911 | 7_3:-12738147 | Msa1093210:CDS |
| TGCCCTGCAATCTGATATTC+AGG | 0.315476 | 7_3:-12738003 | Msa1093210:CDS |
| AAATCTCGTCACACAATAAT+AGG | 0.320076 | 7_3:+12737835 | None:intergenic |
| TCCATGTTCTATTATAGCTT+TGG | 0.323257 | 7_3:+12738969 | None:intergenic |
| GATTCTGAATATCAGTTTGC+AGG | 0.324041 | 7_3:+12737937 | None:intergenic |
| GGAATTGGTGAATAGATCTT+TGG | 0.331923 | 7_3:-12737269 | Msa1093210:three_prime_UTR |
| GGATTTGGGTTTGGAGTCCT+TGG | 0.334390 | 7_3:+12738724 | None:intergenic |
| ATTCAAAACAAAAGTCTATA+TGG | 0.334998 | 7_3:+12737306 | None:intergenic |
| AACTGCTGTCCTGGATAAAC+TGG | 0.338862 | 7_3:-12737706 | Msa1093210:CDS |
| CCAGTCAGATTTGTAGGACT+TGG | 0.338941 | 7_3:+12738891 | None:intergenic |
| ACACATCCTGAAAATCTTCC+AGG | 0.345121 | 7_3:-12740107 | Msa1093210:intron |
| TCCTCCAGATTATGATCTTT+CGG | 0.348663 | 7_3:-12737673 | Msa1093210:intron |
| AAAACGCTTCTGGTACAAAA+AGG | 0.355639 | 7_3:+12737479 | None:intergenic |
| CACATACAACTTTGCATGGT+TGG | 0.357647 | 7_3:-12738114 | Msa1093210:CDS |
| ATGGAAAATTCGGATTATTC+CGG | 0.362639 | 7_3:-12737867 | Msa1093210:CDS |
| AGAACTGAACAAAACGCTTC+TGG | 0.370919 | 7_3:+12737469 | None:intergenic |
| TTCATGCAGAATTTGACATT+TGG | 0.373477 | 7_3:-12737565 | Msa1093210:intron |
| GAAGCAAGACACGAGCCTTT+TGG | 0.376999 | 7_3:+12742223 | None:intergenic |
| ATAGAATCAAATACACCATT+TGG | 0.377118 | 7_3:+12737237 | None:intergenic |
| GCAAACTGATATTCAGAATC+AGG | 0.380819 | 7_3:-12737934 | Msa1093210:CDS |
| ACAATGAATGCATATAGTTC+TGG | 0.388883 | 7_3:-12739066 | Msa1093210:CDS |
| AATAGAACATGGAGAACATA+AGG | 0.393301 | 7_3:-12738959 | Msa1093210:CDS |
| TGCATGGCATTTGATTCTAC+AGG | 0.393871 | 7_3:+12738161 | None:intergenic |
| TTTATAGGTGCTAAGAAAGA+TGG | 0.402571 | 7_3:-12739114 | Msa1093210:intron |
| GATCCTGAATATCAAATTGC+GGG | 0.404686 | 7_3:+12738072 | None:intergenic |
| GGATTTGGAGGATTTGGGTT+TGG | 0.408606 | 7_3:+12738715 | None:intergenic |
| CCTTGTTCTCCTTCCAATGT+TGG | 0.412278 | 7_3:+12740140 | None:intergenic |
| CAGTCTTGTGCCAGCGTACA+TGG | 0.417800 | 7_3:+12738998 | None:intergenic |
| TGTCCTGGATAAACTGGAAT+TGG | 0.418051 | 7_3:-12737700 | Msa1093210:CDS |
| GATCCTGAATATCAGATTGC+AGG | 0.419901 | 7_3:+12738000 | None:intergenic |
| GCAATTTGATATTCAGGATC+AGG | 0.422075 | 7_3:-12738069 | Msa1093210:CDS |
| TCTATTTACTGACTCTCAAT+TGG | 0.424585 | 7_3:-12737799 | Msa1093210:CDS |
| TGAAACTTCAACTGCTGTCC+TGG | 0.427456 | 7_3:-12737715 | Msa1093210:CDS |
| AACAACTCTGCATGGTTGGC+TGG | 0.431062 | 7_3:-12737903 | Msa1093210:CDS |
| CTGTGTAGGTTTCTAGTGAA+TGG | 0.431292 | 7_3:-12740280 | Msa1093210:intron |
| ATCGCAGGCTATGGAAAATT+CGG | 0.436700 | 7_3:-12737877 | Msa1093210:CDS |
| TTCAACTCTGCATGGTTGGC+TGG | 0.436796 | 7_3:-12738038 | Msa1093210:CDS |
| GCGGTGGATTTGGAGGATTT+GGG | 0.438699 | 7_3:+12738710 | None:intergenic |
| CACATTCAACTCTGCATGGT+TGG | 0.439730 | 7_3:-12738042 | Msa1093210:CDS |
| GACAGTATCCTTGGTTTGAT+AGG | 0.443883 | 7_3:-12737532 | Msa1093210:CDS |
| AAAATGCATCAGTACCATCT+AGG | 0.444254 | 7_3:-12738868 | Msa1093210:CDS |
| CAGGGCAGCTTGCGATTCAC+CGG | 0.446866 | 7_3:+12737956 | None:intergenic |
| AACCACGATGATGAATCTTT+CGG | 0.451588 | 7_3:+12739031 | None:intergenic |
| GCAATCTGATATTCAGGATC+AGG | 0.451964 | 7_3:-12738141 | Msa1093210:CDS |
| CCTGTACGCGGTGGATTTGG+AGG | 0.456268 | 7_3:+12738703 | None:intergenic |
| CACAAACAACTCTGCATGGT+TGG | 0.457938 | 7_3:-12737907 | Msa1093210:CDS |
| TACAACTTTGCATGGTTGGC+TGG | 0.462824 | 7_3:-12738110 | Msa1093210:CDS |
| CGTCTTCATCAGTCCCTAGA+TGG | 0.465866 | 7_3:+12738854 | None:intergenic |
| GTTCGCGATGTTATACTGTC+AGG | 0.467320 | 7_3:+12738751 | None:intergenic |
| GACAACTCTGCATGGTTGGC+CGG | 0.472780 | 7_3:-12737975 | Msa1093210:CDS |
| CTTACCGAAAGATCATAATC+TGG | 0.486131 | 7_3:+12737669 | None:intergenic |
| TAAGGGATTTAAGAAGATCA+TGG | 0.488299 | 7_3:-12738941 | Msa1093210:CDS |
| GTATCCTTGGTTTGATAGGC+GGG | 0.489513 | 7_3:-12737528 | Msa1093210:CDS |
| TGGAACAGTAGGTGGAGCTT+CGG | 0.491877 | 7_3:+12742253 | None:intergenic |
| CATGTACGCTGGCACAAGAC+TGG | 0.493768 | 7_3:-12738997 | Msa1093210:CDS |
| GGCTGGTGAATCGCAGGCTA+TGG | 0.495395 | 7_3:-12737886 | Msa1093210:CDS |
| CGAGGAGTTCATACCAACAT+TGG | 0.496522 | 7_3:-12740153 | Msa1093210:CDS |
| TCTCAAGACGACAGTATCCT+TGG | 0.497503 | 7_3:-12737541 | Msa1093210:CDS |
| TTATGTCAAAGCCATGGAAT+TGG | 0.497867 | 7_3:-12737284 | Msa1093210:three_prime_UTR |
| ATGGTTGGCTGGTGAATCAC+AGG | 0.504683 | 7_3:-12738027 | Msa1093210:CDS |
| CCAAGTCCTACAAATCTGAC+TGG | 0.505991 | 7_3:-12738891 | Msa1093210:CDS |
| CCTCCAAATCCACCGCGTAC+AGG | 0.506008 | 7_3:-12738703 | Msa1093210:CDS |
| GGAAATATTGGAGCATTTAG+CGG | 0.509677 | 7_3:-12740216 | Msa1093210:CDS |
| TATCCAATTCCAGTTTATCC+AGG | 0.513615 | 7_3:+12737697 | None:intergenic |
| GGTTTGATAGGCGGGCTATG+AGG | 0.516375 | 7_3:-12737520 | Msa1093210:exon |
| ATAGAACATGGAGAACATAA+GGG | 0.517209 | 7_3:-12738958 | Msa1093210:CDS |
| CTTTGGTACTGAAATCCAAA+TGG | 0.521041 | 7_3:-12737252 | Msa1093210:three_prime_UTR |
| AAAACACATACAACTTTGCA+TGG | 0.525483 | 7_3:-12738118 | Msa1093210:CDS |
| ACTGATGAAGACGAGAAGAA+TGG | 0.528383 | 7_3:-12738844 | Msa1093210:CDS |
| CTGTTCCAATCCGAACCAAA+AGG | 0.530908 | 7_3:-12742238 | Msa1093210:CDS |
| TTTATGCCGAGGGGAAAGCC+AGG | 0.532538 | 7_3:+12740257 | None:intergenic |
| TTAGCGGCTAAATGTGGTGT+GGG | 0.532638 | 7_3:-12740200 | Msa1093210:CDS |
| TTTGAATTATGTCAAAGCCA+TGG | 0.532847 | 7_3:-12737290 | Msa1093210:three_prime_UTR |
| AAATTCGGATTATTCCGGCT+TGG | 0.537500 | 7_3:-12737862 | Msa1093210:CDS |
| CACTACGAAAACAAAATGAC+AGG | 0.538985 | 7_3:-12737756 | Msa1093210:CDS |
| CAATAATAGGTCATCCAAGC+CGG | 0.539478 | 7_3:+12737848 | None:intergenic |
| TCCAATATTTCCACATCAGA+AGG | 0.541653 | 7_3:+12740227 | None:intergenic |
| TCGTGTCTTGCTTCAGTCAA+CGG | 0.542339 | 7_3:-12742214 | Msa1093210:intron |
| TTATAGGTGCTAAGAAAGAT+GGG | 0.542670 | 7_3:-12739113 | Msa1093210:intron |
| ATGGTTGGCTGGTGAATCAC+AGG | 0.543839 | 7_3:-12738099 | Msa1093210:CDS |
| TAGGTTTCTAGTGAATGGCC+TGG | 0.544927 | 7_3:-12740275 | Msa1093210:CDS |
| AAAGTTTGATCCTTCTGATG+TGG | 0.545313 | 7_3:-12740237 | Msa1093210:CDS |
| TCACGACAACTCTGCATGGT+TGG | 0.547089 | 7_3:-12737979 | Msa1093210:CDS |
| AGATCTATTCACCAATTCCA+TGG | 0.548253 | 7_3:+12737273 | None:intergenic |
| AGTATCCTTGGTTTGATAGG+CGG | 0.559174 | 7_3:-12737529 | Msa1093210:CDS |
| AAATGCATCAGTACCATCTA+GGG | 0.560385 | 7_3:-12738867 | Msa1093210:CDS |
| ATGGTTGGCTGGTGAATCGC+AGG | 0.562987 | 7_3:-12737892 | Msa1093210:CDS |
| CCAACATTGGAAGGAGAACA+AGG | 0.565627 | 7_3:-12740140 | Msa1093210:CDS |
| ATCCTGAATATCAGATTGCA+TGG | 0.571869 | 7_3:+12738145 | None:intergenic |
| TTGGTTCGGATTGGAACAGT+AGG | 0.572044 | 7_3:+12742242 | None:intergenic |
| GTTCGGATTGGAACAGTAGG+TGG | 0.575307 | 7_3:+12742245 | None:intergenic |
| GAATGGCCTGGCTTTCCCCT+CGG | 0.583639 | 7_3:-12740263 | Msa1093210:CDS |
| ATTCTGAATATCAGTTTGCA+GGG | 0.585363 | 7_3:+12737938 | None:intergenic |
| ATCCTGAATATCAGATTGCA+GGG | 0.587600 | 7_3:+12738001 | None:intergenic |
| AGGATCAAACTTTATGCCGA+GGG | 0.591558 | 7_3:+12740247 | None:intergenic |
| GAGTTCATACCAACATTGGA+AGG | 0.612629 | 7_3:-12740149 | Msa1093210:CDS |
| AAGGATCAAACTTTATGCCG+AGG | 0.614282 | 7_3:+12740246 | None:intergenic |
| GAGCATTTAGCGGCTAAATG+TGG | 0.621733 | 7_3:-12740206 | Msa1093210:CDS |
| ACCAAAGCTATAATAGAACA+TGG | 0.626362 | 7_3:-12738970 | Msa1093210:CDS |
| ACAACACATTCAACTCTGCA+TGG | 0.632912 | 7_3:-12738046 | Msa1093210:CDS |
| GCATGGCATTTGATTCTACA+GGG | 0.633182 | 7_3:+12738162 | None:intergenic |
| ATAACACAAACAACTCTGCA+TGG | 0.636499 | 7_3:-12737911 | Msa1093210:CDS |
| TTTAGCGGCTAAATGTGGTG+TGG | 0.639141 | 7_3:-12740201 | Msa1093210:CDS |
| TGATCCTGAATATCAAATTG+CGG | 0.639621 | 7_3:+12738071 | None:intergenic |
| TAACATCGCGAACAAGTCCA+AGG | 0.642484 | 7_3:-12738741 | Msa1093210:CDS |
| CGACTGAAGACCATGTACGC+TGG | 0.649864 | 7_3:-12739008 | Msa1093210:CDS |
| ACCGAAAGATCATAATCTGG+AGG | 0.651380 | 7_3:+12737672 | None:intergenic |
| AACTCCTCGATAAACATGTG+AGG | 0.657869 | 7_3:+12740167 | None:intergenic |
| AGGATCACGACAACTCTGCA+TGG | 0.659418 | 7_3:-12737983 | Msa1093210:CDS |
| CGCCGAAAGATTCATCATCG+TGG | 0.681320 | 7_3:-12739033 | Msa1093210:CDS |
| AAAGCCTCACATGTTTATCG+AGG | 0.687510 | 7_3:-12740171 | Msa1093210:CDS |
| ATCCTGAATATCAAATTGCG+GGG | 0.687588 | 7_3:+12738073 | None:intergenic |
| TAGCGGCTAAATGTGGTGTG+GGG | 0.695454 | 7_3:-12740199 | Msa1093210:CDS |
| ATAGCCCGCCTATCAAACCA+AGG | 0.702047 | 7_3:+12737524 | None:intergenic |
| GGATCAAACTTTATGCCGAG+GGG | 0.712709 | 7_3:+12740248 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTTTTTTTGACTTT+TGG | - | chr7_3:12737879-12737898 | Msa1093210:CDS | 10.0% |
| !!! | TTTTATTTTTTTTGACTTTT+GGG | - | chr7_3:12737880-12737899 | Msa1093210:CDS | 10.0% |
| !!! | TTGTTTATTAATTTTTTTAC+TGG | - | chr7_3:12740966-12740985 | Msa1093210:intron | 10.0% |
| !!! | AATGTTATTTTTCTTTTATT+TGG | - | chr7_3:12742049-12742068 | Msa1093210:intron | 10.0% |
| !! | AAAAATACACAACAAAAAAT+GGG | + | chr7_3:12737623-12737642 | None:intergenic | 15.0% |
| !!! | AATGCAATTTTTTTTTCTTT+TGG | - | chr7_3:12737652-12737671 | Msa1093210:intron | 15.0% |
| !!! | TTTATTTTTTTTGACTTTTG+GGG | - | chr7_3:12737881-12737900 | Msa1093210:CDS | 15.0% |
| !! | AAATAAAGGAATTTACAATT+TGG | - | chr7_3:12737981-12738000 | Msa1093210:CDS | 15.0% |
| !! | AATAAAGGAATTTACAATTT+GGG | - | chr7_3:12737982-12738001 | Msa1093210:CDS | 15.0% |
| !! | CTCAAAATGAATAAAAAAAA+GGG | + | chr7_3:12738906-12738925 | None:intergenic | 15.0% |
| !! | ACTCAAAATGAATAAAAAAA+AGG | + | chr7_3:12738907-12738926 | None:intergenic | 15.0% |
| !!! | TGTTTTTATGTAGTATAAAT+TGG | + | chr7_3:12739402-12739421 | None:intergenic | 15.0% |
| !! | CCTTAACTTATAAAATATTA+TGG | + | chr7_3:12739993-12740012 | None:intergenic | 15.0% |
| !!! | CCATAATATTTTATAAGTTA+AGG | - | chr7_3:12739990-12740009 | Msa1093210:intron | 15.0% |
| !!! | TATTATCTGTTTTGTTTTAT+AGG | - | chr7_3:12740340-12740359 | Msa1093210:intron | 15.0% |
| !!! | AACTTTAAATTTTATGAACT+AGG | - | chr7_3:12741271-12741290 | Msa1093210:intron | 15.0% |
| !! | AAATCTAAAAAATGAAGTAT+GGG | + | chr7_3:12741849-12741868 | None:intergenic | 15.0% |
| !! | AAAATCTAAAAAATGAAGTA+TGG | + | chr7_3:12741850-12741869 | None:intergenic | 15.0% |
| !! | GAAAAATACACAACAAAAAA+TGG | + | chr7_3:12737624-12737643 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTTTTGGATGTTT+TGG | - | chr7_3:12737661-12737680 | Msa1093210:intron | 20.0% |
| !!! | ATGATGGAAATGATTTATTT+TGG | - | chr7_3:12737924-12737943 | Msa1093210:CDS | 20.0% |
| !!! | TTTTGGCTTTTTTCTATATA+TGG | - | chr7_3:12737941-12737960 | Msa1093210:CDS | 20.0% |
| !!! | ATATATGGAATGATATTTTG+TGG | - | chr7_3:12737956-12737975 | Msa1093210:CDS | 20.0% |
| !!! | TATATGGAATGATATTTTGT+GGG | - | chr7_3:12737957-12737976 | Msa1093210:CDS | 20.0% |
| !! | ATAAAGGAATTTACAATTTG+GGG | - | chr7_3:12737983-12738002 | Msa1093210:CDS | 20.0% |
| !! | TTATTTAAACCTTTCATATG+TGG | + | chr7_3:12738137-12738156 | None:intergenic | 20.0% |
| !! | CATATGAAAGGTTTAAATAA+AGG | - | chr7_3:12738137-12738156 | Msa1093210:CDS | 20.0% |
| !!! | GTTAGTTATAGATTTTATGT+TGG | - | chr7_3:12738335-12738354 | Msa1093210:intron | 20.0% |
| !! | TTTATGTAGTATAAATTGGA+CGG | + | chr7_3:12739398-12739417 | None:intergenic | 20.0% |
| !! | TCTAATCATTAAGAAGAATT+TGG | - | chr7_3:12739672-12739691 | Msa1093210:intron | 20.0% |
| !! | ATAAGACATTATCTATTGTT+TGG | - | chr7_3:12739734-12739753 | Msa1093210:intron | 20.0% |
| !! | AAAAATCTTGAAAGTGATAA+GGG | - | chr7_3:12739822-12739841 | Msa1093210:intron | 20.0% |
| !! | TGAATGCATATAGTAAATAA+GGG | - | chr7_3:12740240-12740259 | Msa1093210:CDS | 20.0% |
| !!! | AGTAAAAACAGTGTTATTTT+TGG | + | chr7_3:12740936-12740955 | None:intergenic | 20.0% |
| !! | ATTCAAAACAAAAGTCTATA+TGG | + | chr7_3:12742166-12742185 | None:intergenic | 20.0% |
| !! | CGTTTCTTTGATTTCAATAA+TGG | - | chr7_3:12737525-12737544 | Msa1093210:CDS | 25.0% |
| !! | GATATTTTGTGGGTAAATAA+AGG | - | chr7_3:12737967-12737986 | Msa1093210:CDS | 25.0% |
| ! | TAAAGGAATTTACAATTTGG+GGG | - | chr7_3:12737984-12738003 | Msa1093210:CDS | 25.0% |
| ! | TATTTGTTTATTTGTCTAGC+AGG | - | chr7_3:12738521-12738540 | Msa1093210:intron | 25.0% |
| ! | ATTTGTTTATTTGTCTAGCA+GGG | - | chr7_3:12738522-12738541 | Msa1093210:intron | 25.0% |
| ! | TGAATAAAAAAAAGGGCAAA+GGG | + | chr7_3:12738899-12738918 | None:intergenic | 25.0% |
| ! | ATGAATAAAAAAAAGGGCAA+AGG | + | chr7_3:12738900-12738919 | None:intergenic | 25.0% |
| ! | ATTCTTGAAAAAGTTTAGCA+TGG | - | chr7_3:12739116-12739135 | Msa1093210:intron | 25.0% |
| ! | TTCTTGAAAAAGTTTAGCAT+GGG | - | chr7_3:12739117-12739136 | Msa1093210:intron | 25.0% |
| !!! | TATGAACTGACTGTTTTAAA+CGG | - | chr7_3:12739576-12739595 | Msa1093210:intron | 25.0% |
| !! | CACATGTAATTTGTAACTAT+GGG | + | chr7_3:12739627-12739646 | None:intergenic | 25.0% |
| !! | TCACATGTAATTTGTAACTA+TGG | + | chr7_3:12739628-12739647 | None:intergenic | 25.0% |
| ! | TAGTTACAAATTACATGTGA+AGG | - | chr7_3:12739628-12739647 | Msa1093210:intron | 25.0% |
| ! | AGTTACAAATTACATGTGAA+GGG | - | chr7_3:12739629-12739648 | Msa1093210:intron | 25.0% |
| ! | ATAAATAACAACCAAAGCAT+TGG | + | chr7_3:12739790-12739809 | None:intergenic | 25.0% |
| ! | CAAAAATCTTGAAAGTGATA+AGG | - | chr7_3:12739821-12739840 | Msa1093210:intron | 25.0% |
| ! | ACATTAGACTAATATGCAAT+GGG | + | chr7_3:12739884-12739903 | None:intergenic | 25.0% |
| ! | AACATTAGACTAATATGCAA+TGG | + | chr7_3:12739885-12739904 | None:intergenic | 25.0% |
| ! | GTGAATGCATATAGTAAATA+AGG | - | chr7_3:12740239-12740258 | Msa1093210:CDS | 25.0% |
| ! | GAATGCATATAGTAAATAAG+GGG | - | chr7_3:12740241-12740260 | Msa1093210:CDS | 25.0% |
| ! | AAACAGAGAAAAGTGAAAAA+AGG | - | chr7_3:12741011-12741030 | Msa1093210:intron | 25.0% |
| ! | TGTAATTAAGATTTGAAGAC+AGG | - | chr7_3:12741043-12741062 | Msa1093210:intron | 25.0% |
| !!! | AACTACTTTTATCTTCTATG+AGG | + | chr7_3:12741118-12741137 | None:intergenic | 25.0% |
| !!! | TAGTTACATGCAGTTTTTTT+TGG | - | chr7_3:12742105-12742124 | Msa1093210:intron | 25.0% |
| !!! | GCAGTTTTTTTTGGTTAAAT+TGG | - | chr7_3:12742114-12742133 | Msa1093210:intron | 25.0% |
| !!! | TTTTTTGGTTAAATTGGCTT+TGG | - | chr7_3:12742120-12742139 | Msa1093210:intron | 25.0% |
| ! | ATAGAATCAAATACACCATT+TGG | + | chr7_3:12742235-12742254 | None:intergenic | 25.0% |
| TTCCATAGCAAACATTACAT+AGG | - | chr7_3:12737350-12737369 | Msa1093210:three_prime_UTR | 30.0% | |
| AAAGAGATAGAGAGAGAAAA+TGG | - | chr7_3:12737430-12737449 | Msa1093210:three_prime_UTR | 30.0% | |
| ! | CTTTGATTTCAATAATGGCT+AGG | - | chr7_3:12737530-12737549 | Msa1093210:CDS | 30.0% |
| !!! | AGTTTTTTTTCTCCTTCGTT+AGG | - | chr7_3:12737717-12737736 | Msa1093210:CDS | 30.0% |
| !!! | GTTTTTTTTCTCCTTCGTTA+GGG | - | chr7_3:12737718-12737737 | Msa1093210:CDS | 30.0% |
| GTATTGTCAATTGTGTAGTA+GGG | - | chr7_3:12737824-12737843 | Msa1093210:CDS | 30.0% | |
| ATTTACAATTTGGGGGTTTA+TGG | - | chr7_3:12737991-12738010 | Msa1093210:CDS | 30.0% | |
| TTTACAATTTGGGGGTTTAT+GGG | - | chr7_3:12737992-12738011 | Msa1093210:CDS | 30.0% | |
| ! | AAATTTGGCCCTTGTATTTT+TGG | - | chr7_3:12738277-12738296 | Msa1093210:intron | 30.0% |
| GAAAACCACCAAAAATACAA+GGG | + | chr7_3:12738288-12738307 | None:intergenic | 30.0% | |
| AGAAAACCACCAAAAATACA+AGG | + | chr7_3:12738289-12738308 | None:intergenic | 30.0% | |
| GAATGGCTAATTAACATAAG+AGG | - | chr7_3:12738544-12738563 | Msa1093210:intron | 30.0% | |
| !!! | CGTCATATTCATTTTGAGTT+CGG | - | chr7_3:12738700-12738719 | Msa1093210:CDS | 30.0% |
| !!! | GTCATATTCATTTTGAGTTC+GGG | - | chr7_3:12738701-12738720 | Msa1093210:CDS | 30.0% |
| !!! | TCATATTCATTTTGAGTTCG+GGG | - | chr7_3:12738702-12738721 | Msa1093210:CDS | 30.0% |
| AAAAATGCAGGTATAGGAAT+TGG | + | chr7_3:12739031-12739050 | None:intergenic | 30.0% | |
| CAAAAGAAAAATGCAGGTAT+AGG | + | chr7_3:12739037-12739056 | None:intergenic | 30.0% | |
| ! | TACCTGCATTTTTCTTTTGT+TGG | - | chr7_3:12739038-12739057 | Msa1093210:CDS | 30.0% |
| TTCCAACAAAAGAAAAATGC+AGG | + | chr7_3:12739043-12739062 | None:intergenic | 30.0% | |
| ! | TCAAGTTTTTAATGTGCTTG+TGG | - | chr7_3:12739075-12739094 | Msa1093210:CDS | 30.0% |
| ATCAAATACAATGGACAAAG+TGG | + | chr7_3:12739429-12739448 | None:intergenic | 30.0% | |
| AGCTCAGTAATCAAATACAA+TGG | + | chr7_3:12739438-12739457 | None:intergenic | 30.0% | |
| ATTGTATTTGATTACTGAGC+TGG | - | chr7_3:12739437-12739456 | Msa1093210:intron | 30.0% | |
| ATTAGGTACAGTTATTCACA+AGG | + | chr7_3:12739761-12739780 | None:intergenic | 30.0% | |
| CATTAGACTAATATGCAATG+GGG | + | chr7_3:12739883-12739902 | None:intergenic | 30.0% | |
| CATAATGTAACTGACATTCT+TGG | - | chr7_3:12740029-12740048 | Msa1093210:intron | 30.0% | |
| TGACATGTATTTCTTGAAGT+GGG | + | chr7_3:12740063-12740082 | None:intergenic | 30.0% | |
| ATGACATGTATTTCTTGAAG+TGG | + | chr7_3:12740064-12740083 | None:intergenic | 30.0% | |
| ACTGAGGAAAATAAATACAG+TGG | - | chr7_3:12740107-12740126 | Msa1093210:intron | 30.0% | |
| !! | ATGACATTTGCTGATCTTTT+AGG | - | chr7_3:12740173-12740192 | Msa1093210:CDS | 30.0% |
| !! | TTTTAGGTGCTAAGAAACAT+GGG | - | chr7_3:12740189-12740208 | Msa1093210:CDS | 30.0% |
| TTTATAGGTGCTAAGAAAGA+TGG | - | chr7_3:12740355-12740374 | Msa1093210:intron | 30.0% | |
| TTATAGGTGCTAAGAAAGAT+GGG | - | chr7_3:12740356-12740375 | Msa1093210:intron | 30.0% | |
| ACAATGAATGCATATAGTTC+TGG | - | chr7_3:12740403-12740422 | Msa1093210:intron | 30.0% | |
| ACCAAAGCTATAATAGAACA+TGG | - | chr7_3:12740499-12740518 | Msa1093210:intron | 30.0% | |
| TCCATGTTCTATTATAGCTT+TGG | + | chr7_3:12740503-12740522 | None:intergenic | 30.0% | |
| AATAGAACATGGAGAACATA+AGG | - | chr7_3:12740510-12740529 | Msa1093210:intron | 30.0% | |
| ATAGAACATGGAGAACATAA+GGG | - | chr7_3:12740511-12740530 | Msa1093210:intron | 30.0% | |
| TAAGGGATTTAAGAAGATCA+TGG | - | chr7_3:12740528-12740547 | Msa1093210:intron | 30.0% | |
| GAAAAATGAAGAGAAAGCAA+TGG | - | chr7_3:12740687-12740706 | Msa1093210:intron | 30.0% | |
| TAAGATTTGAAGACAGGAAT+TGG | - | chr7_3:12741049-12741068 | Msa1093210:intron | 30.0% | |
| TTCTATGAGGTGGAATAATA+AGG | + | chr7_3:12741105-12741124 | None:intergenic | 30.0% | |
| ! | TACTTTTATCTTCTATGAGG+TGG | + | chr7_3:12741115-12741134 | None:intergenic | 30.0% |
| ! | TGATGTAACTGTTTTACTCT+TGG | - | chr7_3:12741193-12741212 | Msa1093210:intron | 30.0% |
| AAAACACATACAACTTTGCA+TGG | - | chr7_3:12741351-12741370 | Msa1093210:intron | 30.0% | |
| TGATCCTGAATATCAAATTG+CGG | + | chr7_3:12741401-12741420 | None:intergenic | 30.0% | |
| ATTCTGAATATCAGTTTGCA+GGG | + | chr7_3:12741534-12741553 | None:intergenic | 30.0% | |
| ATGGAAAATTCGGATTATTC+CGG | - | chr7_3:12741602-12741621 | Msa1093210:intron | 30.0% | |
| AAATCTCGTCACACAATAAT+AGG | + | chr7_3:12741637-12741656 | None:intergenic | 30.0% | |
| !! | TCTATTTACTGACTCTCAAT+TGG | - | chr7_3:12741670-12741689 | Msa1093210:intron | 30.0% |
| AAGCCTCTAATTATGGTTAT+TGG | - | chr7_3:12741820-12741839 | Msa1093210:intron | 30.0% | |
| CAACCAATAACCATAATTAG+AGG | + | chr7_3:12741826-12741845 | None:intergenic | 30.0% | |
| TTCATGCAGAATTTGACATT+TGG | - | chr7_3:12741904-12741923 | Msa1093210:intron | 30.0% | |
| ! | TGGTGTATTTTGTTCTTCTA+TGG | - | chr7_3:12742140-12742159 | Msa1093210:intron | 30.0% |
| TTTGAATTATGTCAAAGCCA+TGG | - | chr7_3:12742179-12742198 | Msa1093210:intron | 30.0% | |
| ! | GACCTATGTAATGTTTGCTA+TGG | + | chr7_3:12737355-12737374 | None:intergenic | 35.0% |
| AGTTGAACTATCCAGTTTCT+CGG | - | chr7_3:12737786-12737805 | Msa1093210:CDS | 35.0% | |
| GGTATTGTCAATTGTGTAGT+AGG | - | chr7_3:12737823-12737842 | Msa1093210:CDS | 35.0% | |
| TACTGATGGTCAATGAATGA+TGG | - | chr7_3:12737908-12737927 | Msa1093210:CDS | 35.0% | |
| GACATTGACATTGCAGAAAA+TGG | - | chr7_3:12738031-12738050 | Msa1093210:CDS | 35.0% | |
| GATAATGTTGCAGCATCAAT+TGG | - | chr7_3:12738070-12738089 | Msa1093210:CDS | 35.0% | |
| !! | CAATGACCTCTAAAATATCG+CGG | + | chr7_3:12738170-12738189 | None:intergenic | 35.0% |
| !! | CGATATTTTAGAGGTCATTG+TGG | - | chr7_3:12738170-12738189 | Msa1093210:CDS | 35.0% |
| ! | AACTGATTCATCCTCAATCA+TGG | + | chr7_3:12738203-12738222 | None:intergenic | 35.0% |
| GAATCAGTTGTATTGCAATG+TGG | - | chr7_3:12738214-12738233 | Msa1093210:intron | 35.0% | |
| TGTAGCAATCTTTGGTATAG+TGG | + | chr7_3:12738244-12738263 | None:intergenic | 35.0% | |
| CTATACCAAAGATTGCTACA+CGG | - | chr7_3:12738244-12738263 | Msa1093210:intron | 35.0% | |
| TTTATTTGTCTAGCAGGGAA+TGG | - | chr7_3:12738527-12738546 | Msa1093210:intron | 35.0% | |
| TCTATACGAGAATGACAGTT+TGG | + | chr7_3:12738646-12738665 | None:intergenic | 35.0% | |
| !!! | CATATTCATTTTGAGTTCGG+GGG | - | chr7_3:12738703-12738722 | Msa1093210:CDS | 35.0% |
| !!! | ATATTCATTTTGAGTTCGGG+GGG | - | chr7_3:12738704-12738723 | Msa1093210:CDS | 35.0% |
| TCAAAATATGCACCAGAAAC+AGG | - | chr7_3:12738941-12738960 | Msa1093210:CDS | 35.0% | |
| ! | GCTTCAAATTTTCCTGTTTC+TGG | + | chr7_3:12738956-12738975 | None:intergenic | 35.0% |
| GCAAAGTCAATAGAAACATG+AGG | + | chr7_3:12739001-12739020 | None:intergenic | 35.0% | |
| !!! | AATGTTGTTTTTGCCTGTGT+AGG | - | chr7_3:12739175-12739194 | Msa1093210:intron | 35.0% |
| AAAGTTTGATCCTTCTGATG+TGG | - | chr7_3:12739232-12739251 | Msa1093210:intron | 35.0% | |
| TCCTTCTGATGTGGAAATAT+TGG | - | chr7_3:12739241-12739260 | Msa1093210:intron | 35.0% | |
| TCCAATATTTCCACATCAGA+AGG | + | chr7_3:12739245-12739264 | None:intergenic | 35.0% | |
| ! | GGAAATATTGGAGCATTTAG+CGG | - | chr7_3:12739253-12739272 | Msa1093210:intron | 35.0% |
| AGCTGGTAAAATGAATTGAG+TGG | - | chr7_3:12739454-12739473 | Msa1093210:intron | 35.0% | |
| AGAACATACACATCCTGAAA+TGG | - | chr7_3:12739477-12739496 | Msa1093210:intron | 35.0% | |
| CAAAAACATTCCTCCATTTC+AGG | + | chr7_3:12739493-12739512 | None:intergenic | 35.0% | |
| !! | CAAAGCATTGGTCTATCATT+AGG | + | chr7_3:12739778-12739797 | None:intergenic | 35.0% |
| CTAATGATAGACCAATGCTT+TGG | - | chr7_3:12739776-12739795 | Msa1093210:intron | 35.0% | |
| ATCTTGAAAGTGATAAGGGA+TGG | - | chr7_3:12739826-12739845 | Msa1093210:intron | 35.0% | |
| ATTGATATCTGCCAGAAAGT+TGG | - | chr7_3:12739955-12739974 | Msa1093210:intron | 35.0% | |
| GACATGTATTTCTTGAAGTG+GGG | + | chr7_3:12740062-12740081 | None:intergenic | 35.0% | |
| CAAGAAATACATGTCATGCT+CGG | - | chr7_3:12740067-12740086 | Msa1093210:intron | 35.0% | |
| !! | CTTTTAGGTGCTAAGAAACA+TGG | - | chr7_3:12740188-12740207 | Msa1093210:CDS | 35.0% |
| TTTAGGTGCTAAGAAACATG+GGG | - | chr7_3:12740190-12740209 | Msa1093210:CDS | 35.0% | |
| TAAGGGGTTTAAGAAGATCA+TGG | - | chr7_3:12740257-12740276 | Msa1093210:CDS | 35.0% | |
| AACCACGATGATGAATCTTT+CGG | + | chr7_3:12740441-12740460 | None:intergenic | 35.0% | |
| ! | CATTTTCCAGTCAGATTTGT+AGG | + | chr7_3:12740587-12740606 | None:intergenic | 35.0% |
| AAAATGCATCAGTACCATCT+AGG | - | chr7_3:12740601-12740620 | Msa1093210:intron | 35.0% | |
| AAATGCATCAGTACCATCTA+GGG | - | chr7_3:12740602-12740621 | Msa1093210:intron | 35.0% | |
| ! | ACAGGAAAATGTGTTGACAA+TGG | - | chr7_3:12740784-12740803 | Msa1093210:intron | 35.0% |
| ! | GTAACAATCTATGCTGCTTA+TGG | - | chr7_3:12740848-12740867 | Msa1093210:intron | 35.0% |
| AGATAGAACAGAAACCAAAC+TGG | - | chr7_3:12741079-12741098 | Msa1093210:intron | 35.0% | |
| ATCCTGAATATCAGATTGCA+TGG | + | chr7_3:12741327-12741346 | None:intergenic | 35.0% | |
| ATCCTGAATATCAAATTGCG+GGG | + | chr7_3:12741399-12741418 | None:intergenic | 35.0% | |
| GATCCTGAATATCAAATTGC+GGG | + | chr7_3:12741400-12741419 | None:intergenic | 35.0% | |
| GCAATTTGATATTCAGGATC+AGG | - | chr7_3:12741400-12741419 | Msa1093210:intron | 35.0% | |
| ATCCTGAATATCAGATTGCA+GGG | + | chr7_3:12741327-12741346 | None:intergenic | 35.0% | |
| GATTCTGAATATCAGTTTGC+AGG | + | chr7_3:12741535-12741554 | None:intergenic | 35.0% | |
| GCAAACTGATATTCAGAATC+AGG | - | chr7_3:12741535-12741554 | Msa1093210:intron | 35.0% | |
| ATAACACAAACAACTCTGCA+TGG | - | chr7_3:12741558-12741577 | Msa1093210:intron | 35.0% | |
| CACTACGAAAACAAAATGAC+AGG | - | chr7_3:12741713-12741732 | Msa1093210:intron | 35.0% | |
| TATCCAATTCCAGTTTATCC+AGG | + | chr7_3:12741775-12741794 | None:intergenic | 35.0% | |
| TCCTCCAGATTATGATCTTT+CGG | - | chr7_3:12741796-12741815 | Msa1093210:intron | 35.0% | |
| CTTACCGAAAGATCATAATC+TGG | + | chr7_3:12741803-12741822 | None:intergenic | 35.0% | |
| TTTCGGTAAGCCTCTAATTA+TGG | - | chr7_3:12741813-12741832 | Msa1093210:intron | 35.0% | |
| AAAACGCTTCTGGTACAAAA+AGG | + | chr7_3:12741993-12742012 | None:intergenic | 35.0% | |
| TTATGTCAAAGCCATGGAAT+TGG | - | chr7_3:12742185-12742204 | Msa1093210:intron | 35.0% | |
| AGATCTATTCACCAATTCCA+TGG | + | chr7_3:12742199-12742218 | None:intergenic | 35.0% | |
| GGAATTGGTGAATAGATCTT+TGG | - | chr7_3:12742200-12742219 | Msa1093210:intron | 35.0% | |
| ! | CTTTGGTACTGAAATCCAAA+TGG | - | chr7_3:12742217-12742236 | Msa1093210:CDS | 35.0% |
| !! | TGTTTGCTATGGAAGAGCTT+CGG | + | chr7_3:12737344-12737363 | None:intergenic | 40.0% |
| AACTGTTCAAACCCTAACGA+AGG | + | chr7_3:12737732-12737751 | None:intergenic | 40.0% | |
| !! | AGTTCAACTGGTTTGAGCTA+AGG | + | chr7_3:12737775-12737794 | None:intergenic | 40.0% |
| GAGAAACTGGATAGTTCAAC+TGG | + | chr7_3:12737787-12737806 | None:intergenic | 40.0% | |
| GTTGAACTATCCAGTTTCTC+GGG | - | chr7_3:12737787-12737806 | Msa1093210:CDS | 40.0% | |
| !!! | ACTTTTGGGGTTTGTACTGA+TGG | - | chr7_3:12737894-12737913 | Msa1093210:CDS | 40.0% |
| ATCTCAGCACCACATATGAA+AGG | - | chr7_3:12738125-12738144 | Msa1093210:CDS | 40.0% | |
| !! | GTGGCTTTAAACCATGATTG+AGG | - | chr7_3:12738189-12738208 | Msa1093210:intron | 40.0% |
| AAGGGCCAAATTTCAGATTG+CGG | + | chr7_3:12738270-12738289 | None:intergenic | 40.0% | |
| !!! | TTTGGCCCTTGTATTTTTGG+TGG | - | chr7_3:12738280-12738299 | Msa1093210:intron | 40.0% |
| GTATTGAAGAACTGATGCAC+TGG | + | chr7_3:12738383-12738402 | None:intergenic | 40.0% | |
| !!! | TATTCATTTTGAGTTCGGGG+GGG | - | chr7_3:12738705-12738724 | Msa1093210:CDS | 40.0% |
| GTTGTTGTCATGTGACTGAA+AGG | - | chr7_3:12738750-12738769 | Msa1093210:CDS | 40.0% | |
| AACAGCCTCTTGTGTTAAAC+AGG | - | chr7_3:12738793-12738812 | Msa1093210:CDS | 40.0% | |
| ACAGCCTCTTGTGTTAAACA+GGG | - | chr7_3:12738794-12738813 | Msa1093210:CDS | 40.0% | |
| CTTACCCTGTTTAACACAAG+AGG | + | chr7_3:12738801-12738820 | None:intergenic | 40.0% | |
| CTCTTGTGTTAAACAGGGTA+AGG | - | chr7_3:12738799-12738818 | Msa1093210:CDS | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr7_3:12738825-12738844 | Msa1093210:CDS | 40.0% | |
| CATTCACTAGAAACCTACAC+AGG | + | chr7_3:12739191-12739210 | None:intergenic | 40.0% | |
| !! | CTGTGTAGGTTTCTAGTGAA+TGG | - | chr7_3:12739189-12739208 | Msa1093210:intron | 40.0% |
| AGGATCAAACTTTATGCCGA+GGG | + | chr7_3:12739225-12739244 | None:intergenic | 40.0% | |
| AAGGATCAAACTTTATGCCG+AGG | + | chr7_3:12739226-12739245 | None:intergenic | 40.0% | |
| AAAGCCTCACATGTTTATCG+AGG | - | chr7_3:12739298-12739317 | Msa1093210:intron | 40.0% | |
| AACTCCTCGATAAACATGTG+AGG | + | chr7_3:12739305-12739324 | None:intergenic | 40.0% | |
| GAGTTCATACCAACATTGGA+AGG | - | chr7_3:12739320-12739339 | Msa1093210:intron | 40.0% | |
| ACACATCCTGAAAATCTTCC+AGG | - | chr7_3:12739362-12739381 | Msa1093210:intron | 40.0% | |
| ! | TTCTCACCTGGAAGATTTTC+AGG | + | chr7_3:12739371-12739390 | None:intergenic | 40.0% |
| ACATACACATCCTGAAATGG+AGG | - | chr7_3:12739480-12739499 | Msa1093210:intron | 40.0% | |
| GGGAAACTAAAGCAAACTAC+AGG | - | chr7_3:12739649-12739668 | Msa1093210:intron | 40.0% | |
| GTACATTGTGTCCAACTTTC+TGG | + | chr7_3:12739969-12739988 | None:intergenic | 40.0% | |
| TTAGGTGCTAAGAAACATGG+GGG | - | chr7_3:12740191-12740210 | Msa1093210:CDS | 40.0% | |
| ACTGATGAAGACGAGAAGAA+TGG | - | chr7_3:12740625-12740644 | Msa1093210:intron | 40.0% | |
| ! | TCAACACATTTTCCTGTACG+CGG | + | chr7_3:12740781-12740800 | None:intergenic | 40.0% |
| TTGTTACACACCTCTGCAAA+TGG | + | chr7_3:12740835-12740854 | None:intergenic | 40.0% | |
| GTGGAATAATAAGGCCAGTT+TGG | + | chr7_3:12741096-12741115 | None:intergenic | 40.0% | |
| GCATGGCATTTGATTCTACA+GGG | + | chr7_3:12741310-12741329 | None:intergenic | 40.0% | |
| TGCATGGCATTTGATTCTAC+AGG | + | chr7_3:12741311-12741330 | None:intergenic | 40.0% | |
| TGCCATGCAATCTGATATTC+AGG | - | chr7_3:12741322-12741341 | Msa1093210:intron | 40.0% | |
| GCAATCTGATATTCAGGATC+AGG | - | chr7_3:12741328-12741347 | Msa1093210:intron | 40.0% | |
| CACATACAACTTTGCATGGT+TGG | - | chr7_3:12741355-12741374 | Msa1093210:intron | 40.0% | |
| ACAACACATTCAACTCTGCA+TGG | - | chr7_3:12741423-12741442 | Msa1093210:intron | 40.0% | |
| GATCCTGAATATCAGATTGC+AGG | + | chr7_3:12741328-12741347 | None:intergenic | 40.0% | |
| ATCGCAGGCTATGGAAAATT+CGG | - | chr7_3:12741592-12741611 | Msa1093210:intron | 40.0% | |
| AAATTCGGATTATTCCGGCT+TGG | - | chr7_3:12741607-12741626 | Msa1093210:intron | 40.0% | |
| CAATAATAGGTCATCCAAGC+CGG | + | chr7_3:12741624-12741643 | None:intergenic | 40.0% | |
| TGTCCTGGATAAACTGGAAT+TGG | - | chr7_3:12741769-12741788 | Msa1093210:intron | 40.0% | |
| ACCGAAAGATCATAATCTGG+AGG | + | chr7_3:12741800-12741819 | None:intergenic | 40.0% | |
| CACATAGCATGTCAGTAACT+TGG | + | chr7_3:12741874-12741893 | None:intergenic | 40.0% | |
| ! | GACAGTATCCTTGGTTTGAT+AGG | - | chr7_3:12741937-12741956 | Msa1093210:intron | 40.0% |
| ! | AGTATCCTTGGTTTGATAGG+CGG | - | chr7_3:12741940-12741959 | Msa1093210:intron | 40.0% |
| AGAACTGAACAAAACGCTTC+TGG | + | chr7_3:12742003-12742022 | None:intergenic | 40.0% | |
| !! | TTGGTTCGGATTGGAACAGT+AGG | + | chr7_3:12737230-12737249 | None:intergenic | 45.0% |
| CTGTTCCAATCCGAACCAAA+AGG | - | chr7_3:12737231-12737250 | Msa1093210:three_prime_UTR | 45.0% | |
| !! | AAGACACGAGCCTTTTGGTT+CGG | + | chr7_3:12737244-12737263 | None:intergenic | 45.0% |
| TCGTGTCTTGCTTCAGTCAA+CGG | - | chr7_3:12737255-12737274 | Msa1093210:three_prime_UTR | 45.0% | |
| ! | AGAGCGAGTTCAGTGTTGTT+CGG | + | chr7_3:12737472-12737491 | None:intergenic | 45.0% |
| ! | CTATCCAGTTTCTCGGGTTT+TGG | - | chr7_3:12737793-12737812 | Msa1093210:CDS | 45.0% |
| TTCACCAAAACCCGAGAAAC+TGG | + | chr7_3:12737800-12737819 | None:intergenic | 45.0% | |
| !! | TTCTCGGGTTTTGGTGAATG+TGG | - | chr7_3:12737802-12737821 | Msa1093210:CDS | 45.0% |
| TTGTGTAGTAGGGAGTGACA+TGG | - | chr7_3:12737834-12737853 | Msa1093210:CDS | 45.0% | |
| !! | ACGTGACCGCGATATTTTAG+AGG | - | chr7_3:12738161-12738180 | Msa1093210:CDS | 45.0% |
| GCTTAAAAAGACGTCTGCTG+AGG | + | chr7_3:12738431-12738450 | None:intergenic | 45.0% | |
| CTCTTCAGCTGATCAGATCA+AGG | - | chr7_3:12738597-12738616 | Msa1093210:intron | 45.0% | |
| GCTGATCAGATCAAGGATTG+CGG | - | chr7_3:12738604-12738623 | Msa1093210:intron | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | - | chr7_3:12738756-12738775 | Msa1093210:CDS | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | - | chr7_3:12738757-12738776 | Msa1093210:CDS | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr7_3:12738821-12738840 | Msa1093210:CDS | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr7_3:12738824-12738843 | Msa1093210:CDS | 45.0% | |
| !! | TAGGTTTCTAGTGAATGGCC+TGG | - | chr7_3:12739194-12739213 | Msa1093210:intron | 45.0% |
| GGATCAAACTTTATGCCGAG+GGG | + | chr7_3:12739224-12739243 | None:intergenic | 45.0% | |
| GAGCATTTAGCGGCTAAATG+TGG | - | chr7_3:12739263-12739282 | Msa1093210:intron | 45.0% | |
| TTTAGCGGCTAAATGTGGTG+TGG | - | chr7_3:12739268-12739287 | Msa1093210:intron | 45.0% | |
| TTAGCGGCTAAATGTGGTGT+GGG | - | chr7_3:12739269-12739288 | Msa1093210:intron | 45.0% | |
| CGAGGAGTTCATACCAACAT+TGG | - | chr7_3:12739316-12739335 | Msa1093210:intron | 45.0% | |
| CCTTGTTCTCCTTCCAATGT+TGG | + | chr7_3:12739332-12739351 | None:intergenic | 45.0% | |
| CCAACATTGGAAGGAGAACA+AGG | - | chr7_3:12739329-12739348 | Msa1093210:intron | 45.0% | |
| ATGGTCTCTAGTCTGTGGAA+TGG | - | chr7_3:12739845-12739864 | Msa1093210:intron | 45.0% | |
| TGGTCTCTAGTCTGTGGAAT+GGG | - | chr7_3:12739846-12739865 | Msa1093210:intron | 45.0% | |
| CTTCTGCATACAGCACACAA+TGG | - | chr7_3:12739911-12739930 | Msa1093210:intron | 45.0% | |
| ATTTCTTGAAGTGGGGAGCA+AGG | + | chr7_3:12740055-12740074 | None:intergenic | 45.0% | |
| TGCTCGGTACTCTTTGTTGA+TGG | - | chr7_3:12740083-12740102 | Msa1093210:intron | 45.0% | |
| GCTCGGTACTCTTTGTTGAT+GGG | - | chr7_3:12740084-12740103 | Msa1093210:intron | 45.0% | |
| ! | ACTCTTTGTTGATGGGACTG+AGG | - | chr7_3:12740091-12740110 | Msa1093210:intron | 45.0% |
| CCAGTCAGATTTGTAGGACT+TGG | + | chr7_3:12740581-12740600 | None:intergenic | 45.0% | |
| CCAAGTCCTACAAATCTGAC+TGG | - | chr7_3:12740578-12740597 | Msa1093210:intron | 45.0% | |
| GTTCGCGATGTTATACTGTC+AGG | + | chr7_3:12740721-12740740 | None:intergenic | 45.0% | |
| TAACATCGCGAACAAGTCCA+AGG | - | chr7_3:12740728-12740747 | Msa1093210:intron | 45.0% | |
| ! | GGATTTGGAGGATTTGGGTT+TGG | + | chr7_3:12740757-12740776 | None:intergenic | 45.0% |
| ! | TTCACTGTTGCCATTTGCAG+AGG | - | chr7_3:12740822-12740841 | Msa1093210:intron | 45.0% |
| TACAACTTTGCATGGTTGGC+TGG | - | chr7_3:12741359-12741378 | Msa1093210:intron | 45.0% | |
| TGCCCCGCAATTTGATATTC+AGG | - | chr7_3:12741394-12741413 | Msa1093210:intron | 45.0% | |
| CACATTCAACTCTGCATGGT+TGG | - | chr7_3:12741427-12741446 | Msa1093210:intron | 45.0% | |
| TGCCCTGCAATCTGATATTC+AGG | - | chr7_3:12741466-12741485 | Msa1093210:intron | 45.0% | |
| CACAAACAACTCTGCATGGT+TGG | - | chr7_3:12741562-12741581 | Msa1093210:intron | 45.0% | |
| TGAAACTTCAACTGCTGTCC+TGG | - | chr7_3:12741754-12741773 | Msa1093210:intron | 45.0% | |
| AACTGCTGTCCTGGATAAAC+TGG | - | chr7_3:12741763-12741782 | Msa1093210:intron | 45.0% | |
| TCTCAAGACGACAGTATCCT+TGG | - | chr7_3:12741928-12741947 | Msa1093210:intron | 45.0% | |
| ! | GTATCCTTGGTTTGATAGGC+GGG | - | chr7_3:12741941-12741960 | Msa1093210:intron | 45.0% |
| TGGAACAGTAGGTGGAGCTT+CGG | + | chr7_3:12737219-12737238 | None:intergenic | 50.0% | |
| ! | GTTCGGATTGGAACAGTAGG+TGG | + | chr7_3:12737227-12737246 | None:intergenic | 50.0% |
| !!! | ACGAGCCTTTTGGTTCGGAT+TGG | + | chr7_3:12737239-12737258 | None:intergenic | 50.0% |
| ! | GAAGCAAGACACGAGCCTTT+TGG | + | chr7_3:12737249-12737268 | None:intergenic | 50.0% |
| GTCTTGCTTCAGTCAACGGT+AGG | - | chr7_3:12737259-12737278 | Msa1093210:three_prime_UTR | 50.0% | |
| !! | AACGAGCCTGTGGTTTGGTT+GGG | + | chr7_3:12737285-12737304 | None:intergenic | 50.0% |
| GAAATGAAGGAACGAGCCTG+TGG | + | chr7_3:12737295-12737314 | None:intergenic | 50.0% | |
| GCTTCGGGGAGAAGAAATGA+AGG | + | chr7_3:12737308-12737327 | None:intergenic | 50.0% | |
| ATTTCTTCTCCCCGAAGCAC+AGG | - | chr7_3:12737310-12737329 | Msa1093210:three_prime_UTR | 50.0% | |
| GACACAGTGTGTGTATGAGC+GGG | + | chr7_3:12737384-12737403 | None:intergenic | 50.0% | |
| CGACACAGTGTGTGTATGAG+CGG | + | chr7_3:12737385-12737404 | None:intergenic | 50.0% | |
| ! | CACGGCCGCAATCTGAAATT+TGG | - | chr7_3:12738262-12738281 | Msa1093210:intron | 50.0% |
| AAGGTCACGGGTTCAAGTCT+TGG | - | chr7_3:12738769-12738788 | Msa1093210:CDS | 50.0% | |
| AAAAAGGGCAAAGGGCAACC+CGG | + | chr7_3:12738891-12738910 | None:intergenic | 50.0% | |
| TAGCGGCTAAATGTGGTGTG+GGG | - | chr7_3:12739270-12739289 | Msa1093210:intron | 50.0% | |
| TTGGACGGAGAATTCTCACC+TGG | + | chr7_3:12739383-12739402 | None:intergenic | 50.0% | |
| AAGGGATGGTCTCTAGTCTG+TGG | - | chr7_3:12739840-12739859 | Msa1093210:intron | 50.0% | |
| GGTCTCTAGTCTGTGGAATG+GGG | - | chr7_3:12739847-12739866 | Msa1093210:intron | 50.0% | |
| CGCCGAAAGATTCATCATCG+TGG | - | chr7_3:12740436-12740455 | Msa1093210:intron | 50.0% | |
| CGTCTTCATCAGTCCCTAGA+TGG | + | chr7_3:12740618-12740637 | None:intergenic | 50.0% | |
| ! | GGATTTGGGTTTGGAGTCCT+TGG | + | chr7_3:12740748-12740767 | None:intergenic | 50.0% |
| ! | GCGGTGGATTTGGAGGATTT+GGG | + | chr7_3:12740762-12740781 | None:intergenic | 50.0% |
| ! | TTTCCTGTACGCGGTGGATT+TGG | + | chr7_3:12740772-12740791 | None:intergenic | 50.0% |
| ! | ACACATTTTCCTGTACGCGG+TGG | + | chr7_3:12740778-12740797 | None:intergenic | 50.0% |
| ! | ATGGTTGGCTGGTGAATCAC+AGG | - | chr7_3:12741370-12741389 | Msa1093210:intron | 50.0% |
| TTCAACTCTGCATGGTTGGC+TGG | - | chr7_3:12741431-12741450 | Msa1093210:intron | 50.0% | |
| ! | ATGGTTGGCTGGTGAATCAC+AGG | - | chr7_3:12741370-12741389 | Msa1093210:intron | 50.0% |
| AGGATCACGACAACTCTGCA+TGG | - | chr7_3:12741486-12741505 | Msa1093210:intron | 50.0% | |
| TCACGACAACTCTGCATGGT+TGG | - | chr7_3:12741490-12741509 | Msa1093210:intron | 50.0% | |
| AACAACTCTGCATGGTTGGC+TGG | - | chr7_3:12741566-12741585 | Msa1093210:intron | 50.0% | |
| ATAGCCCGCCTATCAAACCA+AGG | + | chr7_3:12741948-12741967 | None:intergenic | 50.0% | |
| !! | GAACGAGCCTGTGGTTTGGT+TGG | + | chr7_3:12737286-12737305 | None:intergenic | 55.0% |
| GAAGGAACGAGCCTGTGGTT+TGG | + | chr7_3:12737290-12737309 | None:intergenic | 55.0% | |
| TTCTCCCCGAAGCACAGGTT+CGG | - | chr7_3:12737315-12737334 | Msa1093210:three_prime_UTR | 55.0% | |
| GTTTCCGAACCTGTGCTTCG+GGG | + | chr7_3:12737322-12737341 | None:intergenic | 55.0% | |
| GGTTTCCGAACCTGTGCTTC+GGG | + | chr7_3:12737323-12737342 | None:intergenic | 55.0% | |
| CGGTTTCCGAACCTGTGCTT+CGG | + | chr7_3:12737324-12737343 | None:intergenic | 55.0% | |
| TGCGGCCGTGTAGCAATCTT+TGG | + | chr7_3:12738252-12738271 | None:intergenic | 55.0% | |
| TGAGTTCGGGGGGGTAACTT+TGG | - | chr7_3:12738714-12738733 | Msa1093210:CDS | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | + | chr7_3:12738864-12738883 | None:intergenic | 55.0% | |
| ACTAGAGCTCCCGCATATGC+AGG | + | chr7_3:12738865-12738884 | None:intergenic | 55.0% | |
| TTTATGCCGAGGGGAAAGCC+AGG | + | chr7_3:12739215-12739234 | None:intergenic | 55.0% | |
| CGACTGAAGACCATGTACGC+TGG | - | chr7_3:12740461-12740480 | Msa1093210:intron | 55.0% | |
| ! | CAGTCTTGTGCCAGCGTACA+TGG | + | chr7_3:12740474-12740493 | None:intergenic | 55.0% |
| CATGTACGCTGGCACAAGAC+TGG | - | chr7_3:12740472-12740491 | Msa1093210:intron | 55.0% | |
| ! | CGCGGTGGATTTGGAGGATT+TGG | + | chr7_3:12740763-12740782 | None:intergenic | 55.0% |
| GACAACTCTGCATGGTTGGC+CGG | - | chr7_3:12741494-12741513 | Msa1093210:intron | 55.0% | |
| ! | ATGGTTGGCTGGTGAATCGC+AGG | - | chr7_3:12741577-12741596 | Msa1093210:intron | 55.0% |
| !! | GGTTTGATAGGCGGGCTATG+AGG | - | chr7_3:12741949-12741968 | Msa1093210:intron | 55.0% |
| GGTAGGCCCAACCAAACCAC+AGG | - | chr7_3:12737276-12737295 | Msa1093210:three_prime_UTR | 60.0% | |
| GGGGGTAACTTTGGCGCAAC+TGG | - | chr7_3:12738723-12738742 | Msa1093210:CDS | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr7_3:12738837-12738856 | Msa1093210:CDS | 60.0% |
| CATATGCAGGGTCCGGGAAG+GGG | + | chr7_3:12738852-12738871 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | + | chr7_3:12738853-12738872 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | - | chr7_3:12738852-12738871 | Msa1093210:CDS | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | - | chr7_3:12738853-12738872 | Msa1093210:CDS | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | - | chr7_3:12738869-12738888 | Msa1093210:CDS | 60.0% |
| ! | GAATGGCCTGGCTTTCCCCT+CGG | - | chr7_3:12739206-12739225 | Msa1093210:intron | 60.0% |
| ! | CCTGTACGCGGTGGATTTGG+AGG | + | chr7_3:12740769-12740788 | None:intergenic | 60.0% |
| CCTCCAAATCCACCGCGTAC+AGG | - | chr7_3:12740766-12740785 | Msa1093210:intron | 60.0% | |
| CAGGGCAGCTTGCGATTCAC+CGG | + | chr7_3:12741516-12741535 | None:intergenic | 60.0% | |
| GGCTGGTGAATCGCAGGCTA+TGG | - | chr7_3:12741583-12741602 | Msa1093210:intron | 60.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr7_3:12738839-12738858 | None:intergenic | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | + | chr7_3:12738854-12738873 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | + | chr7_3:12738858-12738877 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | + | chr7_3:12738859-12738878 | None:intergenic | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | - | chr7_3:12738870-12738889 | Msa1093210:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 12737211 | 12742280 | 12737211 | ID=Msa1093210;Name=Msa1093210 |
| chr7_3 | mRNA | 12737211 | 12742280 | 12737211 | ID=Msa1093210-mRNA-1;Parent=Msa1093210;Name=Msa1093210-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.5|0.4|0.8|1|1|5|311|422 |
| chr7_3 | exon | 12737211 | 12737578 | 12737211 | ID=Msa1093210-mRNA-1:exon:2999;Parent=Msa1093210-mRNA-1 |
| chr7_3 | exon | 12737674 | 12738198 | 12737674 | ID=Msa1093210-mRNA-1:exon:2998;Parent=Msa1093210-mRNA-1 |
| chr7_3 | exon | 12738696 | 12739129 | 12738696 | ID=Msa1093210-mRNA-1:exon:2997;Parent=Msa1093210-mRNA-1 |
| chr7_3 | exon | 12740108 | 12740294 | 12740108 | ID=Msa1093210-mRNA-1:exon:2996;Parent=Msa1093210-mRNA-1 |
| chr7_3 | exon | 12742215 | 12742280 | 12742215 | ID=Msa1093210-mRNA-1:exon:2995;Parent=Msa1093210-mRNA-1 |
| chr7_3 | CDS | 12742215 | 12742280 | 12742215 | ID=Msa1093210-mRNA-1:cds;Parent=Msa1093210-mRNA-1 |
| chr7_3 | CDS | 12740108 | 12740294 | 12740108 | ID=Msa1093210-mRNA-1:cds;Parent=Msa1093210-mRNA-1 |
| chr7_3 | CDS | 12738696 | 12739129 | 12738696 | ID=Msa1093210-mRNA-1:cds;Parent=Msa1093210-mRNA-1 |
| chr7_3 | CDS | 12737674 | 12738198 | 12737674 | ID=Msa1093210-mRNA-1:cds;Parent=Msa1093210-mRNA-1 |
| chr7_3 | CDS | 12737522 | 12737578 | 12737522 | ID=Msa1093210-mRNA-1:cds;Parent=Msa1093210-mRNA-1 |
| chr7_3 | three_prime_UTR | 12737211 | 12737521 | 12737211 | ID=Msa1093210-mRNA-1:three_prime_utr;Parent=Msa1093210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
