Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1093830 | XP_013448043.1 | 86.354 | 960 | 99 | 7 | 1 | 948 | 152 | 1091 | 0.0 | 1562 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1093830 | sp|F4I8S3|CLSY3_ARATH | 44.669 | 544 | 243 | 18 | 437 | 957 | 668 | 1176 | 3.60e-119 | 402 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1093830 | A0A072U883 | 86.354 | 960 | 99 | 7 | 1 | 948 | 152 | 1091 | 0.0 | 1562 |
Gene ID | Type | Classification |
---|---|---|
Msa1093830 | TR | SNF2 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1093830 | MtrunA17_Chr7g0225791 | 86.354 | 960 | 99 | 7 | 1 | 948 | 118 | 1057 | 0.0 | 1562 |
Msa1093830 | MtrunA17_Chr4g0047081 | 60.000 | 1035 | 218 | 19 | 22 | 960 | 85 | 1019 | 0.0 | 1001 |
Msa1093830 | MtrunA17_Chr7g0233021 | 53.839 | 1016 | 290 | 24 | 19 | 959 | 105 | 1016 | 0.0 | 852 |
Msa1093830 | MtrunA17_Chr7g0233031 | 55.084 | 1013 | 296 | 30 | 25 | 946 | 71 | 1015 | 0.0 | 838 |
Msa1093830 | MtrunA17_Chr7g0233001 | 87.459 | 303 | 38 | 0 | 657 | 959 | 1 | 303 | 0.0 | 566 |
Msa1093830 | MtrunA17_Chr7g0232991 | 61.432 | 433 | 137 | 8 | 539 | 946 | 3 | 430 | 4.29e-168 | 509 |
Msa1093830 | MtrunA17_Chr1g0191141 | 30.660 | 561 | 333 | 13 | 416 | 948 | 343 | 875 | 2.30e-67 | 246 |
Msa1093830 | MtrunA17_Chr3g0114161 | 31.740 | 523 | 307 | 14 | 462 | 952 | 520 | 1024 | 3.17e-63 | 234 |
Msa1093830 | MtrunA17_Chr5g0437621 | 30.934 | 514 | 304 | 13 | 461 | 945 | 583 | 1074 | 4.64e-60 | 225 |
Msa1093830 | MtrunA17_Chr7g0224051 | 30.402 | 523 | 313 | 13 | 455 | 948 | 389 | 889 | 1.65e-59 | 223 |
Msa1093830 | MtrunA17_Chr7g0220951 | 78.632 | 117 | 15 | 1 | 940 | 1046 | 290 | 406 | 7.73e-48 | 181 |
Msa1093830 | MtrunA17_Chr8g0352361 | 26.347 | 501 | 289 | 13 | 462 | 947 | 234 | 669 | 1.06e-45 | 178 |
Msa1093830 | MtrunA17_Chr2g0296421 | 27.559 | 508 | 284 | 14 | 506 | 999 | 432 | 869 | 2.61e-45 | 177 |
Msa1093830 | MtrunA17_Chr6g0456891 | 76.636 | 107 | 15 | 1 | 940 | 1046 | 323 | 419 | 1.86e-43 | 168 |
Msa1093830 | MtrunA17_Chr2g0320781 | 85.333 | 75 | 11 | 0 | 885 | 959 | 1 | 75 | 7.94e-36 | 136 |
Msa1093830 | MtrunA17_Chr2g0307381 | 58.974 | 117 | 37 | 2 | 931 | 1046 | 298 | 404 | 2.00e-34 | 140 |
Msa1093830 | MtrunA17_Chr7g0224021 | 41.228 | 114 | 64 | 2 | 577 | 690 | 1 | 111 | 1.78e-21 | 90.9 |
Msa1093830 | MtrunA17_Chr5g0393461 | 24.926 | 337 | 195 | 11 | 601 | 930 | 178 | 463 | 5.34e-17 | 86.7 |
Msa1093830 | MtrunA17_Chr7g0224031 | 26.471 | 204 | 132 | 5 | 759 | 945 | 30 | 232 | 1.02e-12 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1093830 | AT1G05490.1 | 44.669 | 544 | 243 | 18 | 437 | 957 | 668 | 1176 | 3.66e-120 | 402 |
Msa1093830 | AT3G24340.1 | 42.688 | 506 | 242 | 11 | 457 | 960 | 448 | 907 | 1.41e-113 | 379 |
Msa1093830 | AT5G20420.1 | 32.296 | 514 | 293 | 15 | 462 | 947 | 547 | 1033 | 3.69e-61 | 228 |
Msa1093830 | AT3G42670.2 | 32.692 | 520 | 283 | 18 | 462 | 947 | 541 | 1027 | 1.52e-60 | 226 |
Msa1093830 | AT3G42670.3 | 32.692 | 520 | 283 | 18 | 462 | 947 | 541 | 1027 | 1.52e-60 | 226 |
Msa1093830 | AT3G42670.1 | 32.692 | 520 | 283 | 18 | 462 | 947 | 541 | 1027 | 1.52e-60 | 226 |
Msa1093830 | AT3G42670.4 | 32.375 | 522 | 284 | 18 | 462 | 947 | 541 | 1029 | 3.59e-60 | 225 |
Msa1093830 | AT2G16390.2 | 27.623 | 467 | 249 | 15 | 506 | 953 | 273 | 669 | 6.97e-44 | 173 |
Msa1093830 | AT2G16390.1 | 27.623 | 467 | 249 | 15 | 506 | 953 | 270 | 666 | 1.20e-43 | 172 |
Msa1093830 | AT5G38640.1 | 71.028 | 107 | 21 | 1 | 940 | 1046 | 314 | 410 | 8.81e-42 | 164 |
Msa1093830 | AT2G21450.2 | 28.235 | 510 | 276 | 20 | 461 | 950 | 155 | 594 | 8.91e-41 | 162 |
Msa1093830 | AT2G44070.1 | 80.460 | 87 | 17 | 0 | 960 | 1046 | 8 | 94 | 1.07e-40 | 154 |
Msa1093830 | AT2G21450.1 | 28.235 | 510 | 276 | 20 | 461 | 950 | 148 | 587 | 1.10e-40 | 162 |
Msa1093830 | AT2G21450.3 | 28.817 | 465 | 249 | 17 | 506 | 950 | 94 | 496 | 1.70e-40 | 161 |
Msa1093830 | AT1G48970.1 | 63.793 | 116 | 42 | 0 | 931 | 1046 | 318 | 433 | 2.18e-37 | 150 |
Msa1093830 | AT1G48970.2 | 63.793 | 116 | 42 | 0 | 931 | 1046 | 318 | 433 | 2.61e-37 | 150 |
Msa1093830 | AT3G19210.3 | 24.850 | 334 | 193 | 10 | 603 | 929 | 176 | 458 | 4.92e-16 | 83.6 |
Msa1093830 | AT3G19210.1 | 25.449 | 334 | 191 | 11 | 603 | 929 | 176 | 458 | 5.21e-16 | 84.0 |
Msa1093830 | AT3G32330.1 | 24.211 | 380 | 188 | 13 | 601 | 960 | 17 | 316 | 2.40e-15 | 79.0 |
Msa1093830 | AT3G19210.2 | 25.466 | 322 | 182 | 11 | 603 | 917 | 176 | 446 | 2.82e-15 | 81.3 |
Find 199 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTGGGTTTGCAGTATCTTTC+TGG | 0.124153 | 7_3:-14809585 | Msa1093830:CDS |
TATCTACAGATTGGAAATTT+AGG | 0.126449 | 7_3:-14812059 | Msa1093830:intron |
ATATGACTTCTTTGATTTCT+TGG | 0.141776 | 7_3:+14810856 | None:intergenic |
CTCCATTCCAGAACAATTTC+TGG | 0.174401 | 7_3:-14810780 | Msa1093830:CDS |
TATGGTCAGCCTTGTCTTTC+CGG | 0.181588 | 7_3:+14811281 | None:intergenic |
GAAATCAAAGAAGTCATATT+TGG | 0.244946 | 7_3:-14810852 | Msa1093830:CDS |
CGGAGTTGTGAACCTGTTTC+GGG | 0.246918 | 7_3:-14810652 | Msa1093830:CDS |
TTCAAAGAAACAAGCATTCT+TGG | 0.249693 | 7_3:-14811018 | Msa1093830:CDS |
ATTAGGTTTATCCCTTTCTT+TGG | 0.252160 | 7_3:+14812820 | None:intergenic |
AGCCTTGTCTTTCCGGTTCC+AGG | 0.258151 | 7_3:+14811288 | None:intergenic |
ATGATTTATGTCCCTGCTTA+TGG | 0.263420 | 7_3:+14810683 | None:intergenic |
TAAGGAGAAAGAGAAGAAAA+AGG | 0.268400 | 7_3:-14813116 | Msa1093830:CDS |
TATAAAGTTTGTTTCAAATC+TGG | 0.269020 | 7_3:+14811429 | None:intergenic |
GCGGAGTTGTGAACCTGTTT+CGG | 0.280802 | 7_3:-14810653 | Msa1093830:CDS |
AACAATAATCGGCAAGCATT+TGG | 0.280928 | 7_3:+14811227 | None:intergenic |
AAGAAGGCTTTGAATTCATT+TGG | 0.281224 | 7_3:-14811395 | Msa1093830:CDS |
TGCTCCTTGCTAAATGCTAT+TGG | 0.287940 | 7_3:-14812472 | Msa1093830:CDS |
TTCTCCTTACCATCATTATA+AGG | 0.289539 | 7_3:+14813130 | None:intergenic |
TCATCTGAATGTATTGTAAT+CGG | 0.290335 | 7_3:+14813565 | None:intergenic |
TGCTATGCTTCAGGCATTCC+AGG | 0.294856 | 7_3:-14809532 | Msa1093830:CDS |
ATCTACAGATTGGAAATTTA+GGG | 0.298187 | 7_3:-14812058 | Msa1093830:intron |
CGAAGATTCACAGTTTCATT+AGG | 0.313100 | 7_3:+14812803 | None:intergenic |
AAAACAAGCTTCCCGGGTTA+AGG | 0.313745 | 7_3:-14810537 | Msa1093830:CDS |
CTTTAATGTGGCGGAGGAAT+TGG | 0.314903 | 7_3:-14813080 | Msa1093830:CDS |
TTTGACTTGGGATTTGCATT+TGG | 0.314922 | 7_3:+14812757 | None:intergenic |
TTTGTTTCAAATCTGGAATT+AGG | 0.316184 | 7_3:+14811436 | None:intergenic |
CGAAGTGTTATGGGATGAAT+TGG | 0.316690 | 7_3:-14812282 | Msa1093830:CDS |
TCGACCTCTTTCAATCAGTA+TGG | 0.317320 | 7_3:-14809415 | Msa1093830:CDS |
GGGTGATTATGATGTTAAAA+AGG | 0.321436 | 7_3:-14813671 | Msa1093830:CDS |
AGGAGGAGAACGAAGTGTTA+TGG | 0.324265 | 7_3:-14812292 | Msa1093830:CDS |
CTTGTTGTGTTGCCCGAAAC+AGG | 0.324806 | 7_3:+14810640 | None:intergenic |
CATTGTCTTTGTCTTTGACT+TGG | 0.325025 | 7_3:+14812744 | None:intergenic |
TTTATCCCTTTCTTTGGCTT+TGG | 0.325874 | 7_3:+14812826 | None:intergenic |
GGAATCACGTAAACAGAAAA+TGG | 0.330990 | 7_3:-14812603 | Msa1093830:CDS |
TTAAGCAATCCCGAGTTATC+TGG | 0.334660 | 7_3:-14811132 | Msa1093830:CDS |
CAGAAGCGAATCATCCTTTC+CGG | 0.338463 | 7_3:-14810805 | Msa1093830:CDS |
GGAATCAGCTACAGTTTGTT+TGG | 0.342280 | 7_3:-14810997 | Msa1093830:CDS |
CATCCATGTTGAGAAGAATA+AGG | 0.342559 | 7_3:-14812558 | Msa1093830:CDS |
GAACAGTACTCTGTTGGTTC+TGG | 0.347470 | 7_3:-14813391 | Msa1093830:CDS |
ATCCTTGAAAACAAGCTTCC+CGG | 0.349790 | 7_3:-14810544 | Msa1093830:CDS |
ACATGATGATAATGTTAAAC+AGG | 0.350640 | 7_3:-14813497 | Msa1093830:CDS |
AGTGTGGATGTTGCTGATTC+TGG | 0.353823 | 7_3:-14812701 | Msa1093830:CDS |
TTTCCTTGAATGTGCTCTTT+CGG | 0.353869 | 7_3:-14810389 | Msa1093830:CDS |
CACAGTTGAATCATTCTTCA+TGG | 0.355596 | 7_3:+14812436 | None:intergenic |
GGAGGAGAACGAAGTGTTAT+GGG | 0.356347 | 7_3:-14812291 | Msa1093830:CDS |
GTCTCTCACTAGAGTCTTCT+CGG | 0.362179 | 7_3:+14809482 | None:intergenic |
ATCCACACTTTCATTAGGTT+TGG | 0.370140 | 7_3:+14812715 | None:intergenic |
TCCCGGGTTAAGGGATTGTT+TGG | 0.370330 | 7_3:-14810527 | Msa1093830:CDS |
GCAACATCCACACTTTCATT+AGG | 0.370559 | 7_3:+14812710 | None:intergenic |
CTCGCAATGAAAGCACGGTT+TGG | 0.372307 | 7_3:-14811461 | Msa1093830:CDS |
TTTGTTGATTTGGATGATTA+TGG | 0.376062 | 7_3:-14813280 | Msa1093830:CDS |
TATCTTTCTGGAGATATATC+TGG | 0.376252 | 7_3:-14809573 | Msa1093830:CDS |
GGGAGGATGAATTCAAGAAA+TGG | 0.377896 | 7_3:-14811179 | Msa1093830:CDS |
ATGTCAAGGGTTTAGATGTT+GGG | 0.378265 | 7_3:-14812664 | Msa1093830:CDS |
AGATTTCCCTGTGAAGGTTC+AGG | 0.380692 | 7_3:-14811573 | Msa1093830:CDS |
CTGCTAGTATACTACTAACT+TGG | 0.381021 | 7_3:-14811200 | Msa1093830:CDS |
CAAGAAGCTGAAATTGCTAA+TGG | 0.382622 | 7_3:-14810596 | Msa1093830:CDS |
GCTCCTTGCTAAATGCTATT+GGG | 0.387754 | 7_3:-14812471 | Msa1093830:CDS |
AGCTCAGGCGGTATCGTGTT+AGG | 0.387985 | 7_3:+14810718 | None:intergenic |
GGAAGAAGGGCACCATTTGA+TGG | 0.389443 | 7_3:-14811552 | Msa1093830:CDS |
ACAATAATCGGCAAGCATTT+GGG | 0.393842 | 7_3:+14811228 | None:intergenic |
ACTTTCATTAGGTTTGGCTT+TGG | 0.394092 | 7_3:+14812721 | None:intergenic |
ATTTCTCATGCTCCTGGAAC+CGG | 0.395216 | 7_3:-14811300 | Msa1093830:CDS |
TCGTTGTATTGCTATGCTTC+AGG | 0.397260 | 7_3:-14809541 | Msa1093830:CDS |
ATTGTCTTTGTCTTTGACTT+GGG | 0.400352 | 7_3:+14812745 | None:intergenic |
AATGATGATGATAGTTCTTC+TGG | 0.401364 | 7_3:-14813157 | Msa1093830:CDS |
AAAGCTCCCAGAAATTGTTC+TGG | 0.406710 | 7_3:+14810773 | None:intergenic |
GAAGTGGAGCATTCAGATTA+TGG | 0.408065 | 7_3:-14812968 | Msa1093830:CDS |
AAAGAGGTCGACACTCAATA+AGG | 0.408364 | 7_3:+14809427 | None:intergenic |
TTCTACTACCTTTGAGAAGA+AGG | 0.409816 | 7_3:-14812933 | Msa1093830:CDS |
ATTGTTCTGGAATGGAGTTC+CGG | 0.412671 | 7_3:+14810786 | None:intergenic |
TTCAACTGTGTTCGAGTTCA+AGG | 0.414802 | 7_3:-14812423 | Msa1093830:CDS |
CATCTGAATGTATTGTAATC+GGG | 0.416350 | 7_3:+14813566 | None:intergenic |
TCATCATTGTTTACAGAAGA+AGG | 0.417001 | 7_3:+14812989 | None:intergenic |
CTAGCAGGAGCAACAATAAT+CGG | 0.417540 | 7_3:+14811216 | None:intergenic |
CTTCCGAAAGAGCACATTCA+AGG | 0.417616 | 7_3:+14810386 | None:intergenic |
CCTTCTTCCTGAACCTTCAC+AGG | 0.419132 | 7_3:+14811566 | None:intergenic |
GAAAAGTGTGGTTGGACACT+TGG | 0.428846 | 7_3:-14813592 | Msa1093830:CDS |
TGCATTATTTCTCATGCTCC+TGG | 0.431774 | 7_3:-14811306 | Msa1093830:CDS |
CCTTTGTTCATGTGCACAAA+GGG | 0.432796 | 7_3:-14810570 | Msa1093830:CDS |
TCTGGCTCTCCTTATAATGA+TGG | 0.444439 | 7_3:-14813139 | Msa1093830:CDS |
CCTGTGAAGGTTCAGGAAGA+AGG | 0.452901 | 7_3:-14811566 | Msa1093830:CDS |
AAACAAGCTTCCCGGGTTAA+GGG | 0.454479 | 7_3:-14810536 | Msa1093830:CDS |
TCGCAATGAAAGCACGGTTT+GGG | 0.456370 | 7_3:-14811460 | Msa1093830:CDS |
CATGTCAAGGGTTTAGATGT+TGG | 0.458461 | 7_3:-14812665 | Msa1093830:CDS |
GAAAATGTTTCACTGTTTGA+TGG | 0.459625 | 7_3:-14811528 | Msa1093830:CDS |
CGTAGTCTTTGATGGCATCC+TGG | 0.460241 | 7_3:+14809514 | None:intergenic |
TCCATTCCAGAACAATTTCT+GGG | 0.462331 | 7_3:-14810779 | Msa1093830:CDS |
TCGTGTTCACATCGCGATGA+TGG | 0.467848 | 7_3:+14812002 | None:intergenic |
TGGAACTGCGTAGTCTTTGA+TGG | 0.479690 | 7_3:+14809506 | None:intergenic |
GCAAAAGACCATGGAGGAGG+AGG | 0.480692 | 7_3:-14812309 | Msa1093830:CDS |
GAAAATGTGAAGGAGAGAAA+AGG | 0.487529 | 7_3:-14810946 | Msa1093830:CDS |
GGAGGATGAATTCAAGAAAT+GGG | 0.494983 | 7_3:-14811178 | Msa1093830:CDS |
AGAACGCTTCACTAAGCTTA+AGG | 0.496015 | 7_3:+14810744 | None:intergenic |
CAAGTTAGTAGTATACTAGC+AGG | 0.498458 | 7_3:+14811201 | None:intergenic |
TTCGTTCTCCTCCTCCTCCA+TGG | 0.498689 | 7_3:+14812301 | None:intergenic |
GGTTTGTTAGTTCTAGATGA+AGG | 0.499262 | 7_3:-14810886 | Msa1093830:CDS |
TTCTTAAGGCTCCATATCGA+TGG | 0.511211 | 7_3:+14812344 | None:intergenic |
CTCTCCTTATAATGATGGTA+AGG | 0.512852 | 7_3:-14813134 | Msa1093830:CDS |
GGATTGCTTAAATTGTGAAA+CGG | 0.514265 | 7_3:+14811144 | None:intergenic |
ATATGCCTTGAGAAACACTA+TGG | 0.514676 | 7_3:+14811263 | None:intergenic |
TTCTGTAAACAATGATGAAG+TGG | 0.514764 | 7_3:-14812984 | Msa1093830:CDS |
TTCTTGATCTTATCATCAGA+AGG | 0.516557 | 7_3:+14810613 | None:intergenic |
TTCTGATGATGATGTTAAAG+AGG | 0.519113 | 7_3:-14813350 | Msa1093830:CDS |
CCTTTGTGCACATGAACAAA+GGG | 0.519201 | 7_3:+14810571 | None:intergenic |
GCCACCTTCACTGCAAGGAT+CGG | 0.519684 | 7_3:+14811329 | None:intergenic |
AAGATTCTGCTAAAAGCTCC+TGG | 0.520895 | 7_3:-14810907 | Msa1093830:CDS |
TTTCCCATACTGATTGAAAG+AGG | 0.521507 | 7_3:+14809411 | None:intergenic |
TCAAAGCCTTCTTGTTGATG+AGG | 0.523503 | 7_3:+14811405 | None:intergenic |
CACCAAACAATCCCTTAACC+CGG | 0.526676 | 7_3:+14810525 | None:intergenic |
TTGTTGCCAAAGCCAAAGAA+AGG | 0.527606 | 7_3:-14812832 | Msa1093830:CDS |
GTTGATAGATTTCCCTGTGA+AGG | 0.531771 | 7_3:-14811579 | Msa1093830:CDS |
TCCTTGAAAACAAGCTTCCC+GGG | 0.533006 | 7_3:-14810543 | Msa1093830:CDS |
CCCTTTGTTCATGTGCACAA+AGG | 0.533803 | 7_3:-14810571 | Msa1093830:CDS |
TCTTAAGGCTCCATATCGAT+GGG | 0.534642 | 7_3:+14812345 | None:intergenic |
CCCTTTGTGCACATGAACAA+AGG | 0.536847 | 7_3:+14810570 | None:intergenic |
CAAATATATCTCACCACTAG+TGG | 0.541968 | 7_3:-14811916 | Msa1093830:intron |
AACAAAGCAAGAAATGATGA+AGG | 0.542456 | 7_3:-14812624 | Msa1093830:CDS |
TCTACTACCTTTGAGAAGAA+GGG | 0.545851 | 7_3:-14812932 | Msa1093830:CDS |
TCTCTCACTAGAGTCTTCTC+GGG | 0.549362 | 7_3:+14809483 | None:intergenic |
ATCGATATGGAGCCTTAAGA+AGG | 0.554457 | 7_3:-14812342 | Msa1093830:CDS |
AGAAGAACCCTTCTTCTCAA+AGG | 0.556039 | 7_3:+14812925 | None:intergenic |
CTGTGAAGGTTCAGGAAGAA+GGG | 0.557066 | 7_3:-14811565 | Msa1093830:CDS |
GGTGATGAGAAGATGTTTGA+GGG | 0.558428 | 7_3:-14813691 | None:intergenic |
GGCGAGTTTGATGCTGAAGA+TGG | 0.558636 | 7_3:-14813628 | Msa1093830:CDS |
ACAAGATACACAGCCACCGC+TGG | 0.559727 | 7_3:-14812384 | Msa1093830:CDS |
TGTCAAGGGTTTAGATGTTG+GGG | 0.561243 | 7_3:-14812663 | Msa1093830:CDS |
AATGCCGATCCTTGCAGTGA+AGG | 0.561759 | 7_3:-14811333 | Msa1093830:CDS |
ATGTTCTTTACCAGATAACT+CGG | 0.563939 | 7_3:+14811122 | None:intergenic |
TCCCAGAAATTGTTCTGGAA+TGG | 0.564172 | 7_3:+14810778 | None:intergenic |
TTATATCCTCATCAACAAGA+AGG | 0.564538 | 7_3:-14811411 | Msa1093830:CDS |
TGTTGCCAAAGCCAAAGAAA+GGG | 0.565572 | 7_3:-14812831 | Msa1093830:CDS |
TCAGATGAAGAACACTCTGT+TGG | 0.567956 | 7_3:-14813550 | Msa1093830:CDS |
GATGAATAATGAGGAGGTGA+AGG | 0.568372 | 7_3:-14813020 | Msa1093830:CDS |
ACAGCCACCGCTGGTTTCTG+TGG | 0.569330 | 7_3:-14812375 | Msa1093830:CDS |
CGACCTCTTTCAATCAGTAT+GGG | 0.569730 | 7_3:-14809414 | Msa1093830:CDS |
AAAATACTTTAATGTGGCGG+AGG | 0.573273 | 7_3:-14813086 | Msa1093830:CDS |
AGAATCTGACGCTGTATCCA+TGG | 0.574662 | 7_3:-14812246 | Msa1093830:intron |
TTTCTCTCGCAATGAAAGCA+CGG | 0.576491 | 7_3:-14811466 | Msa1093830:CDS |
TGCAAAGTATTGTGTACTTG+CGG | 0.576517 | 7_3:-14811780 | Msa1093830:CDS |
GCACATTCAAGGAAAATCGA+TGG | 0.581694 | 7_3:+14810397 | None:intergenic |
TGGTGATGAGAAGATGTTTG+AGG | 0.582093 | 7_3:-14813692 | None:intergenic |
AATCGGCAAGCATTTGGGAA+AGG | 0.584307 | 7_3:+14811233 | None:intergenic |
TCTGATGATGATGTTAAAGA+GGG | 0.584384 | 7_3:-14813349 | Msa1093830:CDS |
AAGGAATCTATTGATAACAA+TGG | 0.584387 | 7_3:-14812539 | Msa1093830:CDS |
GATGAAGAACAGTACTCTGT+TGG | 0.587952 | 7_3:-14813397 | Msa1093830:CDS |
TGTTTGGTGACTTTGAAAGC+AGG | 0.588078 | 7_3:-14810511 | Msa1093830:CDS |
TCAAAGAAGTCATATTTGGA+AGG | 0.589347 | 7_3:-14810848 | Msa1093830:CDS |
TGCTAGTATACTACTAACTT+GGG | 0.589951 | 7_3:-14811199 | Msa1093830:CDS |
ATTCCTTATTCTTCTCAACA+TGG | 0.589956 | 7_3:+14812555 | None:intergenic |
ATGCAGCCACCTTCACTGCA+AGG | 0.591972 | 7_3:+14811324 | None:intergenic |
TTGTCGAAGAAAAGTGTGGT+TGG | 0.591983 | 7_3:-14813600 | Msa1093830:CDS |
CTTCTTCCTGAACCTTCACA+GGG | 0.592137 | 7_3:+14811567 | None:intergenic |
CAGAAAATGGTGGAGAACAA+AGG | 0.597147 | 7_3:-14812590 | Msa1093830:CDS |
CTCACTAGAGTCTTCTCGGG+TGG | 0.600071 | 7_3:+14809486 | None:intergenic |
GATATGGAGCCTTAAGAAGG+TGG | 0.601574 | 7_3:-14812339 | Msa1093830:CDS |
TCTTGATCTTATCATCAGAA+GGG | 0.604374 | 7_3:+14810614 | None:intergenic |
TGTCCCAATAGCATTTAGCA+AGG | 0.610427 | 7_3:+14812468 | None:intergenic |
TGTTCTTTACCAGATAACTC+GGG | 0.610730 | 7_3:+14811123 | None:intergenic |
TCTGGAATGGAGTTCCGGAA+AGG | 0.615617 | 7_3:+14810791 | None:intergenic |
ATTCAAGGAAAATCGATGGA+TGG | 0.616212 | 7_3:+14810401 | None:intergenic |
AGCCAAACCTAATGAAAGTG+TGG | 0.619641 | 7_3:-14812717 | Msa1093830:CDS |
GCCGATCCTTGCAGTGAAGG+TGG | 0.620537 | 7_3:-14811330 | Msa1093830:CDS |
GTGTTCGAGTTCAAGGAGGA+TGG | 0.621068 | 7_3:-14812416 | Msa1093830:CDS |
AATTTCTGAGATGAATAATG+AGG | 0.624856 | 7_3:-14813029 | Msa1093830:CDS |
GGTGTATATTGCAAATTGTG+TGG | 0.625204 | 7_3:-14811957 | Msa1093830:CDS |
AGTGCAAAAGACCATGGAGG+AGG | 0.626765 | 7_3:-14812312 | Msa1093830:CDS |
TTCTGAGATGAATAATGAGG+AGG | 0.627686 | 7_3:-14813026 | Msa1093830:CDS |
CTTAAGGCTCCATATCGATG+GGG | 0.628906 | 7_3:+14812346 | None:intergenic |
GATGTTGCTGATTCTGGTGA+AGG | 0.634235 | 7_3:-14812695 | Msa1093830:CDS |
GCTGACCATAGTGTTTCTCA+AGG | 0.634254 | 7_3:-14811268 | Msa1093830:CDS |
CATGATGATAATGTTAAACA+GGG | 0.634393 | 7_3:-14813496 | Msa1093830:CDS |
GAAGGAAAAGAGCATGTCAA+GGG | 0.635208 | 7_3:-14812677 | Msa1093830:CDS |
GAAACCGTGCTTACCACTAG+TGG | 0.644506 | 7_3:+14811903 | None:intergenic |
ATCACGTAAACAGAAAATGG+TGG | 0.644933 | 7_3:-14812600 | Msa1093830:CDS |
ATATTGCAAATTGTGTGGTG+TGG | 0.649175 | 7_3:-14811952 | Msa1093830:CDS |
GAATTCAAGAAATGGGACAT+CGG | 0.650153 | 7_3:-14811171 | Msa1093830:CDS |
ACCAAACAATCCCTTAACCC+GGG | 0.651938 | 7_3:+14810526 | None:intergenic |
TGAAGGAAAAGAGCATGTCA+AGG | 0.653775 | 7_3:-14812678 | Msa1093830:CDS |
CTCCTGGAACCGGAAAGACA+AGG | 0.656255 | 7_3:-14811290 | Msa1093830:CDS |
TCATCTAGAACTAACAAACC+AGG | 0.659449 | 7_3:+14810889 | None:intergenic |
GAGGTGAAAAGTGATGAAAG+TGG | 0.660634 | 7_3:-14813649 | Msa1093830:CDS |
CTTTGTTCATGTGCACAAAG+GGG | 0.661128 | 7_3:-14810569 | Msa1093830:CDS |
TTAAGGCTCCATATCGATGG+GGG | 0.662701 | 7_3:+14812347 | None:intergenic |
GTCTCCACAGAAACCAGCGG+TGG | 0.663008 | 7_3:+14812371 | None:intergenic |
TGGGCGAAAATACTTTAATG+TGG | 0.666297 | 7_3:-14813092 | Msa1093830:CDS |
GCGAAAATACTTTAATGTGG+CGG | 0.667240 | 7_3:-14813089 | Msa1093830:CDS |
CTTTCTGGAGATATATCTGG+CGG | 0.667519 | 7_3:-14809570 | Msa1093830:CDS |
TAGTATACTACTAACTTGGG+AGG | 0.670120 | 7_3:-14811196 | Msa1093830:CDS |
TCTGACTCAGACAATGTCAG+AGG | 0.674157 | 7_3:+14809351 | None:intergenic |
GTCAAGGGTTTAGATGTTGG+GGG | 0.682955 | 7_3:-14812662 | Msa1093830:CDS |
AACTGTGTTCGAGTTCAAGG+AGG | 0.688944 | 7_3:-14812420 | Msa1093830:CDS |
GGTGTCTCCACAGAAACCAG+CGG | 0.690925 | 7_3:+14812368 | None:intergenic |
TGGTAAAGAACATGCTGATG+CGG | 0.695876 | 7_3:-14811112 | Msa1093830:CDS |
AGAAAATGAGACTAGCGATG+AGG | 0.704273 | 7_3:-14813215 | Msa1093830:CDS |
AACTTTGTCGAAGAAAAGTG+TGG | 0.706660 | 7_3:-14813604 | Msa1093830:CDS |
AGCATAATATTAATGAAACG+CGG | 0.743459 | 7_3:-14811062 | Msa1093830:CDS |
GAGACGAATGATAAACACAG+TGG | 0.750714 | 7_3:-14813052 | Msa1093830:CDS |
AAAAGTGCAAAAGACCATGG+AGG | 0.766977 | 7_3:-14812315 | Msa1093830:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTGATTTATGTAAAATAAAT+TGG | - | chr7_3:14811146-14811165 | Msa1093830:CDS | 10.0% |
!! | NNNNNNNNNTAAGATAATGA+AGG | - | chr7_3:14812807-14812826 | Msa1093830:CDS | 10.0% |
!!! | AGATATTTTTTTTGTAGATT+TGG | - | chr7_3:14809586-14809605 | Msa1093830:CDS | 15.0% |
!! | AAACTTAAATGTTCTTAAAA+TGG | + | chr7_3:14810810-14810829 | None:intergenic | 15.0% |
!!! | AATTTTAATTTGTGAACTAT+AGG | - | chr7_3:14810844-14810863 | Msa1093830:CDS | 15.0% |
!! | TAAATTGATTAGAGATTAAA+AGG | - | chr7_3:14812934-14812953 | Msa1093830:CDS | 15.0% |
!! | AAATTGATTAGAGATTAAAA+GGG | - | chr7_3:14812935-14812954 | Msa1093830:CDS | 15.0% |
!!! | AGATGATTTTTTTGTTGATT+TGG | - | chr7_3:14809733-14809752 | Msa1093830:intron | 20.0% |
!! | TTATCAACATATATATCACA+AGG | + | chr7_3:14811382-14811401 | None:intergenic | 20.0% |
!!! | TATAAAGTTTGTTTCAAATC+TGG | + | chr7_3:14811597-14811616 | None:intergenic | 20.0% |
!! | TTATAAGAATATGAGATAAG+AGG | - | chr7_3:14812861-14812880 | Msa1093830:CDS | 20.0% |
!! | ATTAGTTACAATAGAGTTTA+AGG | - | chr7_3:14812885-14812904 | Msa1093830:CDS | 20.0% |
!! | AGTTTAAGGAGAATTTAATT+AGG | - | chr7_3:14812899-14812918 | Msa1093830:CDS | 20.0% |
!! | GTTTAAGGAGAATTTAATTA+GGG | - | chr7_3:14812900-14812919 | Msa1093830:CDS | 20.0% |
!! | AGAGATTATCTTGTATAAAT+TGG | - | chr7_3:14813011-14813030 | Msa1093830:CDS | 20.0% |
!! | ATTGATCATTGTAAAATTTG+TGG | - | chr7_3:14813060-14813079 | Msa1093830:CDS | 20.0% |
! | TGATTATGATGTTAAAAAGG+AGG | - | chr7_3:14809355-14809374 | Msa1093830:CDS | 25.0% |
! | TCATCTGAATGTATTGTAAT+CGG | + | chr7_3:14809461-14809480 | None:intergenic | 25.0% |
!! | ACATGATGATAATGTTAAAC+AGG | - | chr7_3:14809526-14809545 | Msa1093830:CDS | 25.0% |
!! | CATGATGATAATGTTAAACA+GGG | - | chr7_3:14809527-14809546 | Msa1093830:CDS | 25.0% |
!!! | TTTGTTGATTTGGATGATTA+TGG | - | chr7_3:14809743-14809762 | Msa1093830:intron | 25.0% |
!!! | AATTTCTGAGATGAATAATG+AGG | - | chr7_3:14809994-14810013 | Msa1093830:intron | 25.0% |
!! | AAGGAATCTATTGATAACAA+TGG | - | chr7_3:14810484-14810503 | Msa1093830:CDS | 25.0% |
! | CTTAAATGTTCTTAAAATGG+AGG | + | chr7_3:14810807-14810826 | None:intergenic | 25.0% |
! | TATCTACAGATTGGAAATTT+AGG | - | chr7_3:14810964-14810983 | Msa1093830:CDS | 25.0% |
! | ATCTACAGATTGGAAATTTA+GGG | - | chr7_3:14810965-14810984 | Msa1093830:CDS | 25.0% |
! | GAAGCTACAAAAATAAAAAG+CGG | - | chr7_3:14810994-14811013 | Msa1093830:CDS | 25.0% |
!!! | ATTGGTTACTTTTCTGATTT+TGG | - | chr7_3:14811164-14811183 | Msa1093830:CDS | 25.0% |
! | TTGGAACATAACACTATATT+TGG | - | chr7_3:14811281-14811300 | Msa1093830:CDS | 25.0% |
!! | GTGATATATATGTTGATAAG+AGG | - | chr7_3:14811383-14811402 | Msa1093830:CDS | 25.0% |
!! | TTTGTTTCAAATCTGGAATT+AGG | + | chr7_3:14811590-14811609 | None:intergenic | 25.0% |
! | TGAATTCATTTGGAAAAACT+TGG | - | chr7_3:14811638-14811657 | Msa1093830:intron | 25.0% |
! | AGCATAATATTAATGAAACG+CGG | - | chr7_3:14811961-14811980 | Msa1093830:CDS | 25.0% |
!!! | TTTCATGCTTTTTCTTATCT+TGG | + | chr7_3:14812061-14812080 | None:intergenic | 25.0% |
!! | ATATGACTTCTTTGATTTCT+TGG | + | chr7_3:14812170-14812189 | None:intergenic | 25.0% |
! | GAAATCAAAGAAGTCATATT+TGG | - | chr7_3:14812171-14812190 | Msa1093830:intron | 25.0% |
! | GACATAAATCATCTAAAAAG+CGG | - | chr7_3:14812351-14812370 | Msa1093830:CDS | 25.0% |
! | TGAAGGAGTTTATTAGAATA+TGG | - | chr7_3:14812824-14812843 | Msa1093830:CDS | 25.0% |
! | GAAGGAGTTTATTAGAATAT+GGG | - | chr7_3:14812825-14812844 | Msa1093830:CDS | 25.0% |
! | GATTATCTTGTATAAATTGG+AGG | - | chr7_3:14813014-14813033 | Msa1093830:CDS | 25.0% |
!! | ATAGAGTCTTTAAGCTTTTA+CGG | - | chr7_3:14813110-14813129 | Msa1093830:CDS | 25.0% |
! | TGACATCCAAATACAAAATA+AGG | - | chr7_3:14813224-14813243 | Msa1093830:CDS | 25.0% |
!!! | GATACACCTTATTTTGTATT+TGG | + | chr7_3:14813233-14813252 | None:intergenic | 25.0% |
! | ATACAAAATAAGGTGTATCT+AGG | - | chr7_3:14813234-14813253 | Msa1093830:CDS | 25.0% |
! | ACACAAGTTTAATAACAGTT+TGG | + | chr7_3:14813298-14813317 | None:intergenic | 25.0% |
!! | TTAAACTTGTGTTTTCTCTA+TGG | - | chr7_3:14813306-14813325 | Msa1093830:CDS | 25.0% |
!! | AGAAGAAAGTATATCCAAAA+GGG | + | chr7_3:14813392-14813411 | None:intergenic | 25.0% |
!! | TAGAAGAAAGTATATCCAAA+AGG | + | chr7_3:14813393-14813412 | None:intergenic | 25.0% |
GGGTGATTATGATGTTAAAA+AGG | - | chr7_3:14809352-14809371 | Msa1093830:CDS | 30.0% | |
CATCTGAATGTATTGTAATC+GGG | + | chr7_3:14809460-14809479 | None:intergenic | 30.0% | |
! | TTCTGATGATGATGTTAAAG+AGG | - | chr7_3:14809673-14809692 | Msa1093830:intron | 30.0% |
! | TCTGATGATGATGTTAAAGA+GGG | - | chr7_3:14809674-14809693 | Msa1093830:intron | 30.0% |
! | CTCATTTTCTTCACTTTCAT+CGG | + | chr7_3:14809798-14809817 | None:intergenic | 30.0% |
! | AATGATGATGATAGTTCTTC+TGG | - | chr7_3:14809866-14809885 | Msa1093830:intron | 30.0% |
TTCTCCTTACCATCATTATA+AGG | + | chr7_3:14809896-14809915 | None:intergenic | 30.0% | |
TAAGGAGAAAGAGAAGAAAA+AGG | - | chr7_3:14809907-14809926 | Msa1093830:intron | 30.0% | |
AAGGAGAAAGAGAAGAAAAA+GGG | - | chr7_3:14809908-14809927 | Msa1093830:intron | 30.0% | |
TCATCATTGTTTACAGAAGA+AGG | + | chr7_3:14810037-14810056 | None:intergenic | 30.0% | |
TTCTGTAAACAATGATGAAG+TGG | - | chr7_3:14810039-14810058 | Msa1093830:intron | 30.0% | |
GAAACAAAAAGCAAAAAGTG+TGG | - | chr7_3:14810144-14810163 | Msa1093830:intron | 30.0% | |
ATTAGGTTTATCCCTTTCTT+TGG | + | chr7_3:14810206-14810225 | None:intergenic | 30.0% | |
! | ATTGTCTTTGTCTTTGACTT+GGG | + | chr7_3:14810281-14810300 | None:intergenic | 30.0% |
AACAAAGCAAGAAATGATGA+AGG | - | chr7_3:14810399-14810418 | Msa1093830:CDS | 30.0% | |
ATTCCTTATTCTTCTCAACA+TGG | + | chr7_3:14810471-14810490 | None:intergenic | 30.0% | |
AACAAGCATGCAAAATATCA+GGG | + | chr7_3:14811409-14811428 | None:intergenic | 30.0% | |
AAACAAGCATGCAAAATATC+AGG | + | chr7_3:14811410-14811429 | None:intergenic | 30.0% | |
! | GAAACATTTTCTCCATCAAA+TGG | + | chr7_3:14811486-14811505 | None:intergenic | 30.0% |
GAAAATGTTTCACTGTTTGA+TGG | - | chr7_3:14811495-14811514 | Msa1093830:CDS | 30.0% | |
TTATATCCTCATCAACAAGA+AGG | - | chr7_3:14811612-14811631 | Msa1093830:intron | 30.0% | |
!! | AAGAAGGCTTTGAATTCATT+TGG | - | chr7_3:14811628-14811647 | Msa1093830:intron | 30.0% |
TGCTAGTATACTACTAACTT+GGG | - | chr7_3:14811824-14811843 | Msa1093830:intron | 30.0% | |
GGATTGCTTAAATTGTGAAA+CGG | + | chr7_3:14811882-14811901 | None:intergenic | 30.0% | |
ATGTTCTTTACCAGATAACT+CGG | + | chr7_3:14811904-14811923 | None:intergenic | 30.0% | |
TTCAAAGAAACAAGCATTCT+TGG | - | chr7_3:14812005-14812024 | Msa1093830:CDS | 30.0% | |
! | GAAAAAGCATGAAAATGTGA+AGG | - | chr7_3:14812067-14812086 | Msa1093830:intron | 30.0% |
TCAAAGAAGTCATATTTGGA+AGG | - | chr7_3:14812175-14812194 | Msa1093830:intron | 30.0% | |
! | AAAAAGTTTTTGCCATAAGC+AGG | - | chr7_3:14812328-14812347 | Msa1093830:CDS | 30.0% |
! | AAAAGTTTTTGCCATAAGCA+GGG | - | chr7_3:14812329-14812348 | Msa1093830:CDS | 30.0% |
TCTTGATCTTATCATCAGAA+GGG | + | chr7_3:14812412-14812431 | None:intergenic | 30.0% | |
TTCTTGATCTTATCATCAGA+AGG | + | chr7_3:14812413-14812432 | None:intergenic | 30.0% | |
! | TATTAGAATATGGGTTACGA+TGG | - | chr7_3:14812834-14812853 | Msa1093830:CDS | 30.0% |
! | ATTAGAATATGGGTTACGAT+GGG | - | chr7_3:14812835-14812854 | Msa1093830:CDS | 30.0% |
TAGAGATTAAAAGGGCAAAA+AGG | - | chr7_3:14812943-14812962 | Msa1093830:CDS | 30.0% | |
AGAGATTAAAAGGGCAAAAA+GGG | - | chr7_3:14812944-14812963 | Msa1093830:CDS | 30.0% | |
!! | TTGTATAAATTGGAGGTGTT+GGG | - | chr7_3:14813021-14813040 | Msa1093830:CDS | 30.0% |
! | TAGAGTCTTTAAGCTTTTAC+GGG | - | chr7_3:14813111-14813130 | Msa1093830:CDS | 30.0% |
TTGATATTGTGCAATAGAAG+AGG | + | chr7_3:14813161-14813180 | None:intergenic | 30.0% | |
TACCTATTGTGTATACATGA+AGG | - | chr7_3:14813263-14813282 | Msa1093830:CDS | 30.0% | |
ACCTATTGTGTATACATGAA+GGG | - | chr7_3:14813264-14813283 | Msa1093830:CDS | 30.0% | |
GGATATACTTTCTTCTAACA+CGG | - | chr7_3:14813396-14813415 | Msa1093830:CDS | 30.0% | |
! | TATCTTTCTGGAGATATATC+TGG | - | chr7_3:14813450-14813469 | Msa1093830:CDS | 30.0% |
AACTTTGTCGAAGAAAAGTG+TGG | - | chr7_3:14809419-14809438 | Msa1093830:CDS | 35.0% | |
GTTAAACAGGGAGAAAAAAG+TGG | - | chr7_3:14809539-14809558 | Msa1093830:CDS | 35.0% | |
CTCTCCTTATAATGATGGTA+AGG | - | chr7_3:14809889-14809908 | Msa1093830:intron | 35.0% | |
AGAAAGAGAAGAAAAAGGGT+GGG | - | chr7_3:14809912-14809931 | Msa1093830:intron | 35.0% | |
TGGGCGAAAATACTTTAATG+TGG | - | chr7_3:14809931-14809950 | Msa1093830:intron | 35.0% | |
GCGAAAATACTTTAATGTGG+CGG | - | chr7_3:14809934-14809953 | Msa1093830:intron | 35.0% | |
AAAATACTTTAATGTGGCGG+AGG | - | chr7_3:14809937-14809956 | Msa1093830:intron | 35.0% | |
!! | TTCTGAGATGAATAATGAGG+AGG | - | chr7_3:14809997-14810016 | Msa1093830:intron | 35.0% |
! | TTCTACTACCTTTGAGAAGA+AGG | - | chr7_3:14810090-14810109 | Msa1093830:intron | 35.0% |
! | TCTACTACCTTTGAGAAGAA+GGG | - | chr7_3:14810091-14810110 | Msa1093830:intron | 35.0% |
! | TTTATCCCTTTCTTTGGCTT+TGG | + | chr7_3:14810200-14810219 | None:intergenic | 35.0% |
CGAAGATTCACAGTTTCATT+AGG | + | chr7_3:14810223-14810242 | None:intergenic | 35.0% | |
!! | TTTGACTTGGGATTTGCATT+TGG | + | chr7_3:14810269-14810288 | None:intergenic | 35.0% |
CATTGTCTTTGTCTTTGACT+TGG | + | chr7_3:14810282-14810301 | None:intergenic | 35.0% | |
! | ACTTTCATTAGGTTTGGCTT+TGG | + | chr7_3:14810305-14810324 | None:intergenic | 35.0% |
ATCCACACTTTCATTAGGTT+TGG | + | chr7_3:14810311-14810330 | None:intergenic | 35.0% | |
ATGTCAAGGGTTTAGATGTT+GGG | - | chr7_3:14810359-14810378 | Msa1093830:intron | 35.0% | |
GGAATCACGTAAACAGAAAA+TGG | - | chr7_3:14810420-14810439 | Msa1093830:CDS | 35.0% | |
ATCACGTAAACAGAAAATGG+TGG | - | chr7_3:14810423-14810442 | Msa1093830:CDS | 35.0% | |
CATCCATGTTGAGAAGAATA+AGG | - | chr7_3:14810465-14810484 | Msa1093830:CDS | 35.0% | |
! | AAGCACACATTTTATGCAGA+AGG | - | chr7_3:14810525-14810544 | Msa1093830:CDS | 35.0% |
CACAGTTGAATCATTCTTCA+TGG | + | chr7_3:14810590-14810609 | None:intergenic | 35.0% | |
CTTAAAATGGAGGATTACCA+TGG | + | chr7_3:14810797-14810816 | None:intergenic | 35.0% | |
! | GTGTGTTACTATCTACAGAT+TGG | - | chr7_3:14810955-14810974 | Msa1093830:CDS | 35.0% |
GGTGTATATTGCAAATTGTG+TGG | - | chr7_3:14811066-14811085 | Msa1093830:CDS | 35.0% | |
ATATTGCAAATTGTGTGGTG+TGG | - | chr7_3:14811071-14811090 | Msa1093830:CDS | 35.0% | |
CAAATATATCTCACCACTAG+TGG | - | chr7_3:14811107-14811126 | Msa1093830:CDS | 35.0% | |
CTGCATAATGCAATCAAAAG+TGG | + | chr7_3:14811215-14811234 | None:intergenic | 35.0% | |
!! | TGCAAAGTATTGTGTACTTG+CGG | - | chr7_3:14811243-14811262 | Msa1093830:CDS | 35.0% |
TTCATTTGGAAAAACTTGGC+AGG | - | chr7_3:14811642-14811661 | Msa1093830:intron | 35.0% | |
ATATGCCTTGAGAAACACTA+TGG | + | chr7_3:14811763-14811782 | None:intergenic | 35.0% | |
ACAATAATCGGCAAGCATTT+GGG | + | chr7_3:14811798-14811817 | None:intergenic | 35.0% | |
AACAATAATCGGCAAGCATT+TGG | + | chr7_3:14811799-14811818 | None:intergenic | 35.0% | |
CAAGTTAGTAGTATACTAGC+AGG | + | chr7_3:14811825-14811844 | None:intergenic | 35.0% | |
CTGCTAGTATACTACTAACT+TGG | - | chr7_3:14811823-14811842 | Msa1093830:intron | 35.0% | |
TAGTATACTACTAACTTGGG+AGG | - | chr7_3:14811827-14811846 | Msa1093830:intron | 35.0% | |
GGAGGATGAATTCAAGAAAT+GGG | - | chr7_3:14811845-14811864 | Msa1093830:intron | 35.0% | |
GAATTCAAGAAATGGGACAT+CGG | - | chr7_3:14811852-14811871 | Msa1093830:intron | 35.0% | |
TGTTCTTTACCAGATAACTC+GGG | + | chr7_3:14811903-14811922 | None:intergenic | 35.0% | |
GGATGACAAAAATGATTTCG+TGG | - | chr7_3:14811982-14812001 | Msa1093830:CDS | 35.0% | |
GAAAATGTGAAGGAGAGAAA+AGG | - | chr7_3:14812077-14812096 | Msa1093830:intron | 35.0% | |
! | TCATCTAGAACTAACAAACC+AGG | + | chr7_3:14812137-14812156 | None:intergenic | 35.0% |
!! | GGTTTGTTAGTTCTAGATGA+AGG | - | chr7_3:14812137-14812156 | Msa1093830:intron | 35.0% |
TCCATTCCAGAACAATTTCT+GGG | - | chr7_3:14812244-14812263 | Msa1093830:intron | 35.0% | |
!!! | CAAAAACTTTTTAGCTCAGG+CGG | + | chr7_3:14812320-14812339 | None:intergenic | 35.0% |
!!! | TGGCAAAAACTTTTTAGCTC+AGG | + | chr7_3:14812323-14812342 | None:intergenic | 35.0% |
ATGATTTATGTCCCTGCTTA+TGG | + | chr7_3:14812343-14812362 | None:intergenic | 35.0% | |
CAAGAAGCTGAAATTGCTAA+TGG | - | chr7_3:14812427-14812446 | Msa1093830:CDS | 35.0% | |
ATTCAAGGAAAATCGATGGA+TGG | + | chr7_3:14812625-14812644 | None:intergenic | 35.0% | |
TTTCCTTGAATGTGCTCTTT+CGG | - | chr7_3:14812634-14812653 | Msa1093830:CDS | 35.0% | |
! | CTTGTATAAATTGGAGGTGT+TGG | - | chr7_3:14813020-14813039 | Msa1093830:CDS | 35.0% |
AACTTTCAGATCGTAAAGGA+CGG | + | chr7_3:14813187-14813206 | None:intergenic | 35.0% | |
TCTGAACTTTCAGATCGTAA+AGG | + | chr7_3:14813191-14813210 | None:intergenic | 35.0% | |
AAAGTTCAGAAGTCTGTTCT+AGG | - | chr7_3:14813201-14813220 | Msa1093830:CDS | 35.0% | |
AATAAGGTGTATCTAGGTCT+AGG | - | chr7_3:14813240-14813259 | Msa1093830:CDS | 35.0% | |
TCCCTTCATGTATACACAAT+AGG | + | chr7_3:14813268-14813287 | None:intergenic | 35.0% | |
!! | TGTTTGTTGTGATTATCAGG+TGG | - | chr7_3:14813419-14813438 | Msa1093830:CDS | 35.0% |
!! | GTTTGTTGTGATTATCAGGT+GGG | - | chr7_3:14813420-14813439 | Msa1093830:CDS | 35.0% |
! | TTTCCCATACTGATTGAAAG+AGG | + | chr7_3:14813615-14813634 | None:intergenic | 35.0% |
GAGGTGAAAAGTGATGAAAG+TGG | - | chr7_3:14809374-14809393 | Msa1093830:CDS | 40.0% | |
! | TTGTCGAAGAAAAGTGTGGT+TGG | - | chr7_3:14809423-14809442 | Msa1093830:CDS | 40.0% |
TCAGATGAAGAACACTCTGT+TGG | - | chr7_3:14809473-14809492 | Msa1093830:CDS | 40.0% | |
AAACAGGGAGAAAAAAGTGG+AGG | - | chr7_3:14809542-14809561 | Msa1093830:CDS | 40.0% | |
GATGAAGAACAGTACTCTGT+TGG | - | chr7_3:14809626-14809645 | Msa1093830:intron | 40.0% | |
GTTAAAGAGGGAGCAAAAAG+TGG | - | chr7_3:14809686-14809705 | Msa1093830:intron | 40.0% | |
AGAAAATGAGACTAGCGATG+AGG | - | chr7_3:14809808-14809827 | Msa1093830:intron | 40.0% | |
!! | TCTGGCTCTCCTTATAATGA+TGG | - | chr7_3:14809884-14809903 | Msa1093830:intron | 40.0% |
GAGAAAGAGAAGAAAAAGGG+TGG | - | chr7_3:14809911-14809930 | Msa1093830:intron | 40.0% | |
GAGACGAATGATAAACACAG+TGG | - | chr7_3:14809971-14809990 | Msa1093830:intron | 40.0% | |
GATGAATAATGAGGAGGTGA+AGG | - | chr7_3:14810003-14810022 | Msa1093830:intron | 40.0% | |
! | GAAGTGGAGCATTCAGATTA+TGG | - | chr7_3:14810055-14810074 | Msa1093830:intron | 40.0% |
AGAAGAACCCTTCTTCTCAA+AGG | + | chr7_3:14810101-14810120 | None:intergenic | 40.0% | |
TTGTTGCCAAAGCCAAAGAA+AGG | - | chr7_3:14810191-14810210 | Msa1093830:intron | 40.0% | |
TGTTGCCAAAGCCAAAGAAA+GGG | - | chr7_3:14810192-14810211 | Msa1093830:intron | 40.0% | |
AGCCAAACCTAATGAAAGTG+TGG | - | chr7_3:14810306-14810325 | Msa1093830:intron | 40.0% | |
GCAACATCCACACTTTCATT+AGG | + | chr7_3:14810316-14810335 | None:intergenic | 40.0% | |
! | TGAAGGAAAAGAGCATGTCA+AGG | - | chr7_3:14810345-14810364 | Msa1093830:intron | 40.0% |
! | GAAGGAAAAGAGCATGTCAA+GGG | - | chr7_3:14810346-14810365 | Msa1093830:intron | 40.0% |
CATGTCAAGGGTTTAGATGT+TGG | - | chr7_3:14810358-14810377 | Msa1093830:intron | 40.0% | |
TGTCAAGGGTTTAGATGTTG+GGG | - | chr7_3:14810360-14810379 | Msa1093830:intron | 40.0% | |
! | CAGAAAATGGTGGAGAACAA+AGG | - | chr7_3:14810433-14810452 | Msa1093830:CDS | 40.0% |
TGCTCCTTGCTAAATGCTAT+TGG | - | chr7_3:14810551-14810570 | Msa1093830:CDS | 40.0% | |
GCTCCTTGCTAAATGCTATT+GGG | - | chr7_3:14810552-14810571 | Msa1093830:CDS | 40.0% | |
TGTCCCAATAGCATTTAGCA+AGG | + | chr7_3:14810558-14810577 | None:intergenic | 40.0% | |
! | TTCAACTGTGTTCGAGTTCA+AGG | - | chr7_3:14810600-14810619 | Msa1093830:CDS | 40.0% |
TCTTAAGGCTCCATATCGAT+GGG | + | chr7_3:14810681-14810700 | None:intergenic | 40.0% | |
TTCTTAAGGCTCCATATCGA+TGG | + | chr7_3:14810682-14810701 | None:intergenic | 40.0% | |
ATCGATATGGAGCCTTAAGA+AGG | - | chr7_3:14810681-14810700 | Msa1093830:CDS | 40.0% | |
!!! | GCACTTTTTCCACCTTCTTA+AGG | + | chr7_3:14810696-14810715 | None:intergenic | 40.0% |
! | GGAAAAAGTGCAAAAGACCA+TGG | - | chr7_3:14810705-14810724 | Msa1093830:CDS | 40.0% |
! | AAAAGTGCAAAAGACCATGG+AGG | - | chr7_3:14810708-14810727 | Msa1093830:CDS | 40.0% |
! | CGAAGTGTTATGGGATGAAT+TGG | - | chr7_3:14810741-14810760 | Msa1093830:CDS | 40.0% |
! | ACTTTTCTCGACGAAGAGAT+TGG | - | chr7_3:14811045-14811064 | Msa1093830:CDS | 40.0% |
! | GTTGATAGATTTCCCTGTGA+AGG | - | chr7_3:14811444-14811463 | Msa1093830:CDS | 40.0% |
TTTCTCTCGCAATGAAAGCA+CGG | - | chr7_3:14811557-14811576 | Msa1093830:CDS | 40.0% | |
TCAAAGCCTTCTTGTTGATG+AGG | + | chr7_3:14811621-14811640 | None:intergenic | 40.0% | |
! | TGCATTATTTCTCATGCTCC+TGG | - | chr7_3:14811717-14811736 | Msa1093830:intron | 40.0% |
CTAGCAGGAGCAACAATAAT+CGG | + | chr7_3:14811810-14811829 | None:intergenic | 40.0% | |
GGGAGGATGAATTCAAGAAA+TGG | - | chr7_3:14811844-14811863 | Msa1093830:intron | 40.0% | |
TTAAGCAATCCCGAGTTATC+TGG | - | chr7_3:14811891-14811910 | Msa1093830:intron | 40.0% | |
TGGTAAAGAACATGCTGATG+CGG | - | chr7_3:14811911-14811930 | Msa1093830:intron | 40.0% | |
! | GGAATCAGCTACAGTTTGTT+TGG | - | chr7_3:14812026-14812045 | Msa1093830:CDS | 40.0% |
AAGATTCTGCTAAAAGCTCC+TGG | - | chr7_3:14812116-14812135 | Msa1093830:intron | 40.0% | |
!! | ATTGTTCTGGAATGGAGTTC+CGG | + | chr7_3:14812240-14812259 | None:intergenic | 40.0% |
CTCCATTCCAGAACAATTTC+TGG | - | chr7_3:14812243-14812262 | Msa1093830:intron | 40.0% | |
!! | TCCCAGAAATTGTTCTGGAA+TGG | + | chr7_3:14812248-14812267 | None:intergenic | 40.0% |
AAAGCTCCCAGAAATTGTTC+TGG | + | chr7_3:14812253-14812272 | None:intergenic | 40.0% | |
AGAACGCTTCACTAAGCTTA+AGG | + | chr7_3:14812282-14812301 | None:intergenic | 40.0% | |
CCTTTGTGCACATGAACAAA+GGG | + | chr7_3:14812455-14812474 | None:intergenic | 40.0% | |
CCTTTGTTCATGTGCACAAA+GGG | - | chr7_3:14812453-14812472 | Msa1093830:CDS | 40.0% | |
CTTTGTTCATGTGCACAAAG+GGG | - | chr7_3:14812454-14812473 | Msa1093830:CDS | 40.0% | |
ATCCTTGAAAACAAGCTTCC+CGG | - | chr7_3:14812479-14812498 | Msa1093830:CDS | 40.0% | |
! | TGTTTGGTGACTTTGAAAGC+AGG | - | chr7_3:14812512-14812531 | Msa1093830:CDS | 40.0% |
GCACATTCAAGGAAAATCGA+TGG | + | chr7_3:14812629-14812648 | None:intergenic | 40.0% | |
AATCAATTTCCCTGCGTATG+CGG | + | chr7_3:14812991-14813010 | None:intergenic | 40.0% | |
AGAGTAGTGACTCTATTGTG+AGG | - | chr7_3:14813085-14813104 | Msa1093830:CDS | 40.0% | |
ATTCGCAGAACAATTGAAGC+GGG | + | chr7_3:14813365-14813384 | None:intergenic | 40.0% | |
CATTCGCAGAACAATTGAAG+CGG | + | chr7_3:14813366-14813385 | None:intergenic | 40.0% | |
GCTTCAATTGTTCTGCGAAT+GGG | - | chr7_3:14813365-14813384 | Msa1093830:CDS | 40.0% | |
!! | CGGTGTTTGTTGTGATTATC+AGG | - | chr7_3:14813416-14813435 | Msa1093830:CDS | 40.0% |
! | CTTTCTGGAGATATATCTGG+CGG | - | chr7_3:14813453-14813472 | Msa1093830:CDS | 40.0% |
TCGTTGTATTGCTATGCTTC+AGG | - | chr7_3:14813482-14813501 | Msa1093830:CDS | 40.0% | |
AAAGAGGTCGACACTCAATA+AGG | + | chr7_3:14813599-14813618 | None:intergenic | 40.0% | |
TCGACCTCTTTCAATCAGTA+TGG | - | chr7_3:14813608-14813627 | Msa1093830:CDS | 40.0% | |
CGACCTCTTTCAATCAGTAT+GGG | - | chr7_3:14813609-14813628 | Msa1093830:CDS | 40.0% | |
! | GAAAAGTGTGGTTGGACACT+TGG | - | chr7_3:14809431-14809450 | Msa1093830:CDS | 45.0% |
!! | GAACAGTACTCTGTTGGTTC+TGG | - | chr7_3:14809632-14809651 | Msa1093830:intron | 45.0% |
AAAGAGGGAGCAAAAAGTGG+AGG | - | chr7_3:14809689-14809708 | Msa1093830:intron | 45.0% | |
! | CTTTAATGTGGCGGAGGAAT+TGG | - | chr7_3:14809943-14809962 | Msa1093830:intron | 45.0% |
!! | AGTGTGGATGTTGCTGATTC+TGG | - | chr7_3:14810322-14810341 | Msa1093830:intron | 45.0% |
!! | GATGTTGCTGATTCTGGTGA+AGG | - | chr7_3:14810328-14810347 | Msa1093830:intron | 45.0% |
GTCAAGGGTTTAGATGTTGG+GGG | - | chr7_3:14810361-14810380 | Msa1093830:intron | 45.0% | |
AGATGTTGGGGGAGTTTCTT+TGG | - | chr7_3:14810372-14810391 | Msa1093830:intron | 45.0% | |
! | AACTGTGTTCGAGTTCAAGG+AGG | - | chr7_3:14810603-14810622 | Msa1093830:CDS | 45.0% |
TTAAGGCTCCATATCGATGG+GGG | + | chr7_3:14810679-14810698 | None:intergenic | 45.0% | |
CTTAAGGCTCCATATCGATG+GGG | + | chr7_3:14810680-14810699 | None:intergenic | 45.0% | |
GATATGGAGCCTTAAGAAGG+TGG | - | chr7_3:14810684-14810703 | Msa1093830:CDS | 45.0% | |
! | AGGAGGAGAACGAAGTGTTA+TGG | - | chr7_3:14810731-14810750 | Msa1093830:CDS | 45.0% |
! | GGAGGAGAACGAAGTGTTAT+GGG | - | chr7_3:14810732-14810751 | Msa1093830:CDS | 45.0% |
AGAATCTGACGCTGTATCCA+TGG | - | chr7_3:14810777-14810796 | Msa1093830:CDS | 45.0% | |
GCGGCTAAAGCAGTACTATT+TGG | - | chr7_3:14811262-14811281 | Msa1093830:CDS | 45.0% | |
!!! | GCTTGTTTTGCACATGACAC+AGG | - | chr7_3:14811422-14811441 | Msa1093830:CDS | 45.0% |
AGATTTCCCTGTGAAGGTTC+AGG | - | chr7_3:14811450-14811469 | Msa1093830:CDS | 45.0% | |
CTTCTTCCTGAACCTTCACA+GGG | + | chr7_3:14811459-14811478 | None:intergenic | 45.0% | |
CTGTGAAGGTTCAGGAAGAA+GGG | - | chr7_3:14811458-14811477 | Msa1093830:CDS | 45.0% | |
! | TCGCAATGAAAGCACGGTTT+GGG | - | chr7_3:14811563-14811582 | Msa1093830:CDS | 45.0% |
ATTTCTCATGCTCCTGGAAC+CGG | - | chr7_3:14811723-14811742 | Msa1093830:intron | 45.0% | |
! | TATGGTCAGCCTTGTCTTTC+CGG | + | chr7_3:14811745-14811764 | None:intergenic | 45.0% |
GCTGACCATAGTGTTTCTCA+AGG | - | chr7_3:14811755-14811774 | Msa1093830:intron | 45.0% | |
AATCGGCAAGCATTTGGGAA+AGG | + | chr7_3:14811793-14811812 | None:intergenic | 45.0% | |
CAGAAGCGAATCATCCTTTC+CGG | - | chr7_3:14812218-14812237 | Msa1093830:intron | 45.0% | |
CCCTTTGTTCATGTGCACAA+AGG | - | chr7_3:14812452-14812471 | Msa1093830:CDS | 45.0% | |
CCCTTTGTGCACATGAACAA+AGG | + | chr7_3:14812456-14812475 | None:intergenic | 45.0% | |
TCCTTGAAAACAAGCTTCCC+GGG | - | chr7_3:14812480-14812499 | Msa1093830:CDS | 45.0% | |
AAAACAAGCTTCCCGGGTTA+AGG | - | chr7_3:14812486-14812505 | Msa1093830:CDS | 45.0% | |
AAACAAGCTTCCCGGGTTAA+GGG | - | chr7_3:14812487-14812506 | Msa1093830:CDS | 45.0% | |
ACCAAACAATCCCTTAACCC+GGG | + | chr7_3:14812500-14812519 | None:intergenic | 45.0% | |
CACCAAACAATCCCTTAACC+CGG | + | chr7_3:14812501-14812520 | None:intergenic | 45.0% | |
! | CTTCCGAAAGAGCACATTCA+AGG | + | chr7_3:14812640-14812659 | None:intergenic | 45.0% |
AGAAGAATCTGCTCTCGACA+AGG | - | chr7_3:14812661-14812680 | Msa1093830:CDS | 45.0% | |
ATCAATTTCCCTGCGTATGC+GGG | + | chr7_3:14812990-14813009 | None:intergenic | 45.0% | |
CGCTTCAATTGTTCTGCGAA+TGG | - | chr7_3:14813364-14813383 | Msa1093830:CDS | 45.0% | |
GTGGGTTTGCAGTATCTTTC+TGG | - | chr7_3:14813438-14813457 | Msa1093830:CDS | 45.0% | |
TGGAACTGCGTAGTCTTTGA+TGG | + | chr7_3:14813520-14813539 | None:intergenic | 45.0% | |
TCTCTCACTAGAGTCTTCTC+GGG | + | chr7_3:14813543-14813562 | None:intergenic | 45.0% | |
GTCTCTCACTAGAGTCTTCT+CGG | + | chr7_3:14813544-14813563 | None:intergenic | 45.0% | |
TCTGACTCAGACAATGTCAG+AGG | + | chr7_3:14813675-14813694 | None:intergenic | 45.0% | |
GGCGAGTTTGATGCTGAAGA+TGG | - | chr7_3:14809395-14809414 | Msa1093830:CDS | 50.0% | |
CAGGGAGAAAAAAGTGGAGG+AGG | - | chr7_3:14809545-14809564 | Msa1093830:CDS | 50.0% | |
GGAGCAAAAAGTGGAGGAAG+CGG | - | chr7_3:14809695-14809714 | Msa1093830:intron | 50.0% | |
! | GTGTTCGAGTTCAAGGAGGA+TGG | - | chr7_3:14810607-14810626 | Msa1093830:CDS | 50.0% |
AGTGCAAAAGACCATGGAGG+AGG | - | chr7_3:14810711-14810730 | Msa1093830:CDS | 50.0% | |
TCGTGTTCACATCGCGATGA+TGG | + | chr7_3:14811024-14811043 | None:intergenic | 50.0% | |
CTCACCACTAGTGGTAAGCA+CGG | - | chr7_3:14811116-14811135 | Msa1093830:CDS | 50.0% | |
GAAACCGTGCTTACCACTAG+TGG | + | chr7_3:14811123-14811142 | None:intergenic | 50.0% | |
CCTTCTTCCTGAACCTTCAC+AGG | + | chr7_3:14811460-14811479 | None:intergenic | 50.0% | |
CCTGTGAAGGTTCAGGAAGA+AGG | - | chr7_3:14811457-14811476 | Msa1093830:CDS | 50.0% | |
!! | GGAAGAAGGGCACCATTTGA+TGG | - | chr7_3:14811471-14811490 | Msa1093830:CDS | 50.0% |
! | CTCGCAATGAAAGCACGGTT+TGG | - | chr7_3:14811562-14811581 | Msa1093830:CDS | 50.0% |
AATGCCGATCCTTGCAGTGA+AGG | - | chr7_3:14811690-14811709 | Msa1093830:intron | 50.0% | |
! | TCTGGAATGGAGTTCCGGAA+AGG | + | chr7_3:14812235-14812254 | None:intergenic | 50.0% |
GCGGAGTTGTGAACCTGTTT+CGG | - | chr7_3:14812370-14812389 | Msa1093830:CDS | 50.0% | |
CGGAGTTGTGAACCTGTTTC+GGG | - | chr7_3:14812371-14812390 | Msa1093830:CDS | 50.0% | |
! | CTTGTTGTGTTGCCCGAAAC+AGG | + | chr7_3:14812386-14812405 | None:intergenic | 50.0% |
!! | ACCCGGGAAGCTTGTTTTCA+AGG | + | chr7_3:14812484-14812503 | None:intergenic | 50.0% |
TCCCGGGTTAAGGGATTGTT+TGG | - | chr7_3:14812496-14812515 | Msa1093830:CDS | 50.0% | |
TGCTCTCGACAAGGATCATC+TGG | - | chr7_3:14812670-14812689 | Msa1093830:CDS | 50.0% | |
AAAGGGCAAAAAGGGCAACC+CGG | - | chr7_3:14812952-14812971 | Msa1093830:CDS | 50.0% | |
! | TTCTGCGAATGGGTCCCTTT+TGG | - | chr7_3:14813375-14813394 | Msa1093830:CDS | 50.0% |
TGCTATGCTTCAGGCATTCC+AGG | - | chr7_3:14813491-14813510 | Msa1093830:CDS | 50.0% | |
! | CGTAGTCTTTGATGGCATCC+TGG | + | chr7_3:14813512-14813531 | None:intergenic | 50.0% |
ACAAGATACACAGCCACCGC+TGG | - | chr7_3:14810639-14810658 | Msa1093830:CDS | 55.0% | |
GGTGTCTCCACAGAAACCAG+CGG | + | chr7_3:14810658-14810677 | None:intergenic | 55.0% | |
TGGAGACACCCCCATCGATA+TGG | - | chr7_3:14810668-14810687 | Msa1093830:CDS | 55.0% | |
GCAAAAGACCATGGAGGAGG+AGG | - | chr7_3:14810714-14810733 | Msa1093830:CDS | 55.0% | |
TTCGTTCTCCTCCTCCTCCA+TGG | + | chr7_3:14810725-14810744 | None:intergenic | 55.0% | |
GCCACCTTCACTGCAAGGAT+CGG | + | chr7_3:14811697-14811716 | None:intergenic | 55.0% | |
ATGCAGCCACCTTCACTGCA+AGG | + | chr7_3:14811702-14811721 | None:intergenic | 55.0% | |
CTCCTGGAACCGGAAAGACA+AGG | - | chr7_3:14811733-14811752 | Msa1093830:intron | 55.0% | |
! | AGCCTTGTCTTTCCGGTTCC+AGG | + | chr7_3:14811738-14811757 | None:intergenic | 55.0% |
AGCTCAGGCGGTATCGTGTT+AGG | + | chr7_3:14812308-14812327 | None:intergenic | 55.0% | |
! | ATGCGGGAGCTTTAGTGCAC+CGG | + | chr7_3:14812974-14812993 | None:intergenic | 55.0% |
ACTAAAGCTCCCGCATACGC+AGG | - | chr7_3:14812978-14812997 | Msa1093830:CDS | 55.0% | |
CTAAAGCTCCCGCATACGCA+GGG | - | chr7_3:14812979-14812998 | Msa1093830:CDS | 55.0% | |
!! | GGAGGTGTTGGGAGTCAGAA+AGG | - | chr7_3:14813032-14813051 | Msa1093830:CDS | 55.0% |
CTCACTAGAGTCTTCTCGGG+TGG | + | chr7_3:14813540-14813559 | None:intergenic | 55.0% | |
!! | ACAGCCACCGCTGGTTTCTG+TGG | - | chr7_3:14810648-14810667 | Msa1093830:CDS | 60.0% |
GTCTCCACAGAAACCAGCGG+TGG | + | chr7_3:14810655-14810674 | None:intergenic | 60.0% | |
GCCGATCCTTGCAGTGAAGG+TGG | - | chr7_3:14811693-14811712 | Msa1093830:intron | 60.0% | |
! | TGCGGGAGCTTTAGTGCACC+GGG | + | chr7_3:14812973-14812992 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 14809344 | 14813701 | 14809344 | ID=Msa1093830;Name=Msa1093830 |
chr7_3 | mRNA | 14809344 | 14813701 | 14809344 | ID=Msa1093830-mRNA-1;Parent=Msa1093830;Name=Msa1093830-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|0.6|1|1|5|0|1046 |
chr7_3 | exon | 14812247 | 14813701 | 14812247 | ID=Msa1093830-mRNA-1:exon:3369;Parent=Msa1093830-mRNA-1 |
chr7_3 | exon | 14811917 | 14812072 | 14811917 | ID=Msa1093830-mRNA-1:exon:3368;Parent=Msa1093830-mRNA-1 |
chr7_3 | exon | 14811772 | 14811810 | 14811772 | ID=Msa1093830-mRNA-1:exon:3367;Parent=Msa1093830-mRNA-1 |
chr7_3 | exon | 14810375 | 14811601 | 14810375 | ID=Msa1093830-mRNA-1:exon:3366;Parent=Msa1093830-mRNA-1 |
chr7_3 | exon | 14809344 | 14809607 | 14809344 | ID=Msa1093830-mRNA-1:exon:3365;Parent=Msa1093830-mRNA-1 |
chr7_3 | CDS | 14812247 | 14813701 | 14812247 | ID=Msa1093830-mRNA-1:cds;Parent=Msa1093830-mRNA-1 |
chr7_3 | CDS | 14811917 | 14812072 | 14811917 | ID=Msa1093830-mRNA-1:cds;Parent=Msa1093830-mRNA-1 |
chr7_3 | CDS | 14811772 | 14811810 | 14811772 | ID=Msa1093830-mRNA-1:cds;Parent=Msa1093830-mRNA-1 |
chr7_3 | CDS | 14810375 | 14811601 | 14810375 | ID=Msa1093830-mRNA-1:cds;Parent=Msa1093830-mRNA-1 |
chr7_3 | CDS | 14809344 | 14809607 | 14809344 | ID=Msa1093830-mRNA-1:cds;Parent=Msa1093830-mRNA-1 |
Gene Sequence |
Protein sequence |