AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1094360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1094360 MtrunA17_Chr6g0481041 64.110 730 190 12 1 662 1 726 0.0 879
Msa1094360 MtrunA17_Chr7g0224451 85.931 462 40 5 15 469 1 444 0.0 807
Msa1094360 MtrunA17_Chr7g0224481 86.246 349 32 3 15 357 1 339 0.0 616
Msa1094360 MtrunA17_Chr8g0350321 44.789 710 309 16 25 661 109 808 0.0 569
Msa1094360 MtrunA17_Chr7g0246631 44.413 698 309 16 31 661 91 776 0.0 555
Msa1094360 MtrunA17_Chr7g0224491 89.836 305 22 2 360 663 1 297 0.0 550
Msa1094360 MtrunA17_Chr2g0322731 44.978 687 305 14 29 660 98 766 0.0 545
Msa1094360 MtrunA17_Chr4g0024351 43.121 705 334 15 11 660 38 730 0.0 533
Msa1094360 MtrunA17_Chr5g0410711 42.351 706 336 15 20 659 78 778 2.20e-176 522
Msa1094360 MtrunA17_Chr1g0203671 41.785 706 327 18 29 659 93 789 8.31e-174 515
Msa1094360 MtrunA17_Chr2g0331581 36.858 662 368 12 36 661 144 791 7.61e-154 464
Msa1094360 MtrunA17_Chr6g0472471 37.677 706 344 16 36 659 74 765 2.47e-141 431
Msa1094360 MtrunA17_Chr5g0394111 36.692 665 320 19 38 659 40 646 3.32e-126 388
Msa1094360 MtrunA17_Chr2g0292731 39.484 504 270 10 178 659 58 548 3.45e-106 333
Msa1094360 MtrunA17_Chr2g0292741 39.279 499 273 9 178 659 50 535 1.07e-103 326
Msa1094360 MtrunA17_Chr2g0292761 35.467 578 307 18 110 659 1 540 3.71e-88 285
Msa1094360 MtrunA17_Chr7g0224461 88.983 118 13 0 546 663 1 118 6.79e-66 212
Msa1094360 MtrunA17_Chr7g0224431 65.839 161 14 2 207 367 1 120 4.00e-61 199
Msa1094360 MtrunA17_Chr5g0419821 47.945 146 62 3 8 142 14 156 3.90e-33 125
Msa1094360 MtrunA17_Chr2g0319671 33.054 239 134 6 176 409 51 268 3.18e-30 121
Msa1094360 MtrunA17_Chr2g0304191 44.030 134 73 2 192 324 1 133 3.49e-26 104
Msa1094360 MtrunA17_Chr2g0319691 44.068 118 51 4 298 409 1 109 6.20e-22 92.8
Msa1094360 MtrunA17_Chr2g0319681 28.151 238 137 7 443 659 1 225 5.33e-20 90.1
Msa1094360 MtrunA17_Chr3g0140351 21.708 691 370 27 37 629 23 640 8.77e-20 94.4
Msa1094360 MtrunA17_Chr4g0028991 21.221 721 397 27 1 629 7 648 8.03e-18 87.8
Msa1094360 MtrunA17_Chr2g0319701 27.826 230 138 7 447 659 5 223 2.28e-15 76.3
Msa1094360 MtrunA17_Chr1g0205981 30.286 175 87 5 86 227 1 173 3.88e-13 68.9
Msa1094360 MtrunA17_Chr7g0217111 31.633 98 67 0 16 113 62 159 8.07e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1094360 AT1G73360.1 52.292 698 256 14 30 662 31 716 0.0 665
Msa1094360 AT1G17920.2 52.326 688 242 18 34 662 24 684 0.0 641
Msa1094360 AT1G17920.1 52.326 688 242 18 34 662 24 684 0.0 641
Msa1094360 AT4G04890.2 46.143 687 303 17 31 661 62 737 0.0 565
Msa1094360 AT4G04890.1 46.143 687 303 17 31 661 62 737 0.0 565
Msa1094360 AT4G21750.2 44.648 710 302 16 31 661 62 759 0.0 546
Msa1094360 AT4G21750.1 44.648 710 302 16 31 661 62 759 0.0 546
Msa1094360 AT4G21750.3 44.648 710 302 16 31 661 62 759 0.0 546
Msa1094360 AT4G21750.4 44.648 710 302 16 31 661 62 759 0.0 546
Msa1094360 AT1G05230.3 42.939 694 317 15 20 661 50 716 0.0 533
Msa1094360 AT1G05230.8 42.816 696 317 16 20 661 50 718 1.01e-179 528
Msa1094360 AT1G05230.4 42.816 696 317 16 20 661 50 718 1.01e-179 528
Msa1094360 AT1G05230.9 42.816 696 317 16 20 661 50 718 1.01e-179 528
Msa1094360 AT1G05230.10 42.816 696 317 16 20 661 50 718 1.01e-179 528
Msa1094360 AT1G05230.7 42.816 696 317 16 20 661 50 718 1.01e-179 528
Msa1094360 AT1G05230.11 42.816 696 317 16 20 661 50 718 1.01e-179 528
Msa1094360 AT1G05230.2 42.816 696 317 16 20 661 50 718 1.01e-179 528
Msa1094360 AT1G05230.6 42.816 696 317 16 20 661 50 718 1.01e-179 528
Msa1094360 AT1G05230.5 42.816 696 317 16 20 661 50 718 1.01e-179 528
Msa1094360 AT1G05230.1 42.816 696 317 16 20 661 50 718 1.01e-179 528
Msa1094360 AT4G00730.1 43.650 685 314 14 31 661 134 800 8.29e-177 523
Msa1094360 AT3G61150.1 41.573 712 333 16 24 661 103 805 2.45e-176 523
Msa1094360 AT5G52170.2 40.988 688 336 17 13 662 31 686 6.43e-155 463
Msa1094360 AT5G52170.3 41.219 689 328 19 13 662 31 681 7.23e-155 463
Msa1094360 AT5G52170.1 41.219 689 328 19 13 662 31 681 7.23e-155 463
Msa1094360 AT1G05230.12 41.918 563 271 11 20 537 50 601 4.17e-144 433
Msa1094360 AT3G03260.1 38.008 713 345 16 20 662 12 697 5.35e-144 436
Msa1094360 AT1G79840.3 37.444 665 365 16 27 659 39 684 3.80e-142 431
Msa1094360 AT1G79840.6 37.444 665 365 16 27 659 39 684 3.80e-142 431
Msa1094360 AT5G46880.3 39.246 716 328 20 31 659 111 806 6.08e-142 434
Msa1094360 AT5G46880.1 39.246 716 328 20 31 659 111 806 6.08e-142 434
Msa1094360 AT5G46880.2 39.246 716 328 20 31 659 111 806 6.08e-142 434
Msa1094360 AT1G79840.1 37.444 665 365 16 27 659 97 742 1.16e-141 431
Msa1094360 AT1G79840.2 37.444 665 365 16 27 659 126 771 7.53e-141 430
Msa1094360 AT4G17710.1 40.402 646 338 18 31 659 88 703 1.15e-135 414
Msa1094360 AT2G32370.1 36.011 697 364 17 18 661 55 722 1.54e-129 399
Msa1094360 AT5G17320.1 36.364 726 356 17 20 661 14 717 1.33e-127 394
Msa1094360 AT1G79840.4 37.899 533 298 11 27 535 97 620 8.80e-121 374
Msa1094360 AT1G34650.1 35.653 704 354 13 38 661 23 707 1.11e-114 360
Msa1094360 AT4G00730.2 44.289 429 195 8 31 422 134 555 1.20e-111 348
Msa1094360 AT3G03260.2 38.692 535 273 11 20 507 12 538 8.35e-110 342
Msa1094360 AT4G25530.1 33.680 674 383 16 26 660 35 683 5.47e-104 331
Msa1094360 AT1G79840.5 41.089 404 214 10 27 415 97 491 3.26e-95 303
Msa1094360 AT5G07260.1 27.220 518 313 18 97 588 10 489 8.49e-43 162
Msa1094360 AT5G07260.2 26.744 516 313 17 97 588 10 484 1.62e-42 162
Msa1094360 AT5G60690.1 23.954 526 299 21 17 503 8 471 1.18e-19 94.4
Msa1094360 AT1G52150.1 21.538 715 408 31 37 660 20 672 2.08e-16 84.0
Msa1094360 AT1G52150.2 21.508 716 408 31 37 660 20 673 2.25e-16 84.0
Msa1094360 AT1G52150.3 21.399 715 409 30 37 660 20 672 2.53e-16 83.6
Msa1094360 AT1G30490.1 21.083 702 411 26 14 629 1 645 4.44e-15 79.7
Msa1094360 AT2G34710.1 21.586 454 279 15 37 464 28 430 3.54e-14 76.6
Msa1094360 AT4G26920.1 26.016 246 156 11 192 429 72 299 1.98e-11 67.4

Find 118 sgRNAs with CRISPR-Local

Find 271 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTTTGGTTGAAATGTTTA+TGG 0.116059 7_3:-15931028 Msa1094360:CDS
CCAATTGTTAATGGACTTAT+TGG 0.149364 7_3:-15928317 Msa1094360:CDS
TGGAAACTAATGAGCCTTTA+TGG 0.155056 7_3:-15931194 Msa1094360:CDS
AACAGTTGCATTTCAAATTA+TGG 0.161793 7_3:-15928372 Msa1094360:CDS
TAACTGCATTTCCGTGTTTA+AGG 0.200891 7_3:-15929211 Msa1094360:intron
GAGTCTGTTCCAATTGTTAA+TGG 0.231563 7_3:-15928326 Msa1094360:CDS
CTTGCTTATCTTATGGATTC+AGG 0.246109 7_3:-15930185 Msa1094360:CDS
ATCCTACTAAGATCAAATTT+TGG 0.254513 7_3:-15932304 Msa1094360:CDS
AGAAGCTTCGATGCGAATAT+TGG 0.259862 7_3:+15931083 None:intergenic
CATTCTCTTCTATGAGTATA+CGG 0.271618 7_3:+15932104 None:intergenic
TGAAAAGCTTGCTTATCTTA+TGG 0.274578 7_3:-15930192 Msa1094360:CDS
AACAATGATCCTCCAATGTT+TGG 0.280132 7_3:+15928395 None:intergenic
TGTTTCTTCTAAGAGACTTA+TGG 0.294415 7_3:-15932982 Msa1094360:CDS
ATTTGCCATTAGGCATGTTT+TGG 0.302182 7_3:+15930458 None:intergenic
CCTAGGGAACATTGTTTCAT+AGG 0.302491 7_3:+15931128 None:intergenic
ACCTGCTGGTCTCTCTAATA+AGG 0.317654 7_3:-15931274 Msa1094360:CDS
AGGAAGTAAAATTCTCTAAT+AGG 0.322633 7_3:+15930601 None:intergenic
CGAGGCCTTCGTCTTCCTTC+CGG 0.332723 7_3:-15930490 Msa1094360:CDS
ATTACCTTGGATTTGCCATT+AGG 0.342697 7_3:+15930448 None:intergenic
ATCAATAGTGGAGTTGCATT+TGG 0.344218 7_3:-15930251 Msa1094360:CDS
ACTCTTACGCTTCAAGCCTT+TGG 0.345673 7_3:+15932877 None:intergenic
CTTATGGATTCAGGCCATTC+CGG 0.351380 7_3:-15930176 Msa1094360:CDS
TTTGCCATTGTCACAATAGT+TGG 0.352656 7_3:+15930880 None:intergenic
GTGTTTGATTTCATCCATAA+AGG 0.361237 7_3:+15931180 None:intergenic
CAAGGAGGTAATAGTGATAA+TGG 0.367284 7_3:-15928443 Msa1094360:CDS
TTGATGAACTTCCTGGTAAA+AGG 0.375379 7_3:+15931319 None:intergenic
GAAGCAAAATGTTTGTTATG+AGG 0.381185 7_3:+15930520 None:intergenic
ACAATGATCCTCCAATGTTT+GGG 0.386821 7_3:+15928396 None:intergenic
AAGAAATTGAACACAGTTTG+TGG 0.389284 7_3:+15929739 None:intergenic
CCAATAAGTCCATTAACAAT+TGG 0.391204 7_3:+15928317 None:intergenic
TTCATTATTGATGAATCAAC+AGG 0.391966 7_3:+15928548 None:intergenic
ATCGAAGCTTCTAGAAATTC+TGG 0.400503 7_3:-15931072 Msa1094360:CDS
GAAGCTTCGATGCGAATATT+GGG 0.405652 7_3:+15931084 None:intergenic
GCAGGTTGGTAAGGAACATT+TGG 0.407059 7_3:+15931291 None:intergenic
GGCAATGTTGATGAACTTCC+TGG 0.408593 7_3:+15931312 None:intergenic
TCTAAGTGGTTCTTTGCAAT+TGG 0.413268 7_3:-15930821 Msa1094360:intron
TTTCTTCTGATACTCATAAG+AGG 0.424848 7_3:-15932938 Msa1094360:CDS
GGTTTCGCAATTACTTCTGA+TGG 0.425225 7_3:-15928488 Msa1094360:CDS
ATGCATCAGCTAGTCATAGA+TGG 0.431673 7_3:-15929858 Msa1094360:CDS
GCGCTTAGCACCTCACCATT+AGG 0.435182 7_3:+15929790 None:intergenic
AACACGGAAATGCAGTTACC+TGG 0.445852 7_3:+15929216 None:intergenic
ATCATGGTCCTCTTTCCATC+AGG 0.446341 7_3:+15929925 None:intergenic
TACATTCAATTACTACCATC+AGG 0.449951 7_3:-15928509 Msa1094360:CDS
GAAAGTTGTGTGGACTCATC+AGG 0.456149 7_3:-15928590 Msa1094360:CDS
GAGAGACCAGCAGGTTGGTA+AGG 0.458220 7_3:+15931282 None:intergenic
CCTTTGTGTTAGCTTCATCA+TGG 0.462487 7_3:+15929909 None:intergenic
GGAACAGACTCCATGTTAGA+TGG 0.463514 7_3:+15928338 None:intergenic
CAAAATGATAATAATATTCA+AGG 0.464579 7_3:-15928461 Msa1094360:CDS
ACATTGTTTCATAGGTTTCA+AGG 0.467987 7_3:+15931136 None:intergenic
AACCAAAATTTGATCTTAGT+AGG 0.469554 7_3:+15932302 None:intergenic
TTCATCCAAAACATGCCTAA+TGG 0.470312 7_3:-15930463 Msa1094360:CDS
TACTGTAAACAATTTGAGAA+AGG 0.478598 7_3:-15930574 Msa1094360:CDS
TAAGCGCATCTACTACCATT+TGG 0.483607 7_3:-15929774 Msa1094360:CDS
CTCTTGAACATCATTACCAT+TGG 0.494619 7_3:+15929266 None:intergenic
AACACAGTTTGTGGAGGGAG+AGG 0.500511 7_3:+15929748 None:intergenic
TCCTTATTAGAGAGACCAGC+AGG 0.504163 7_3:+15931273 None:intergenic
GTAAACAATTTGAGAAAGGA+TGG 0.505133 7_3:-15930570 Msa1094360:CDS
CCTATGAAACAATGTTCCCT+AGG 0.505913 7_3:-15931128 Msa1094360:CDS
ATAGCAAATGTTTCGCGCCC+AGG 0.511234 7_3:-15929234 Msa1094360:CDS
TTTAACTGATTATTAACCCT+AGG 0.515861 7_3:+15931111 None:intergenic
TAGTCGAATGTACTTTCCAA+TGG 0.529852 7_3:-15929282 Msa1094360:CDS
TGTCATGAATGCCTCGACTT+TGG 0.538376 7_3:-15931043 Msa1094360:CDS
GTGAGGAAGAGTCAGCCTAA+TGG 0.540825 7_3:-15929805 Msa1094360:CDS
TTAACTGATTATTAACCCTA+GGG 0.546265 7_3:+15931112 None:intergenic
TTTGATCTTAGTAGGATCCA+TGG 0.546590 7_3:+15932310 None:intergenic
TCAGTGATTTCATCACCTGA+TGG 0.552751 7_3:-15929940 Msa1094360:intron
AGTTATATCTTCTCGAACGA+AGG 0.555948 7_3:-15930848 Msa1094360:CDS
AATGTTCCTTACCAACCTGC+TGG 0.559665 7_3:-15931288 Msa1094360:CDS
GCTACCTCCTTCGATATGAC+CGG 0.559982 7_3:+15930157 None:intergenic
TGGATGAAATCAAACACTGA+TGG 0.561407 7_3:-15931174 Msa1094360:CDS
CTCATTCAAAGTTGATAATG+TGG 0.562410 7_3:+15929834 None:intergenic
ATATCTTCTCGAACGAAGGA+TGG 0.565148 7_3:-15930844 Msa1094360:CDS
ATTTCCAACTATTGTGACAA+TGG 0.566424 7_3:-15930884 Msa1094360:CDS
AGCTCAAACCCAAACATTGG+AGG 0.568422 7_3:-15928404 Msa1094360:CDS
GAAGTAATTGCGAAACCTGA+TGG 0.568742 7_3:+15928494 None:intergenic
GATGAAGCTAACACAAAGGA+TGG 0.568765 7_3:-15929905 Msa1094360:CDS
GAATAGAAGGACTCAGATGA+AGG 0.569088 7_3:-15932276 Msa1094360:intron
CAATGGTAATGATGTTCAAG+AGG 0.572359 7_3:-15929265 Msa1094360:CDS
ACAAGCTCAAACCCAAACAT+TGG 0.579839 7_3:-15928407 Msa1094360:CDS
GGCCATTCCGGTCATATCGA+AGG 0.579973 7_3:-15930164 Msa1094360:CDS
CTCCTTCGATATGACCGGAA+TGG 0.582084 7_3:+15930162 None:intergenic
GATCTGAGAATATAGCTATG+AGG 0.582816 7_3:-15932072 Msa1094360:CDS
TTTCATCACCTGATGGAAAG+AGG 0.584897 7_3:-15929933 Msa1094360:CDS
TGAAAATGCAATGCAAGAGC+TGG 0.585649 7_3:-15931226 Msa1094360:CDS
ACAAAGGTTGCAGTTAGGCA+AGG 0.593066 7_3:-15932339 Msa1094360:CDS
CTATGAAACAATGTTCCCTA+GGG 0.595217 7_3:-15931127 Msa1094360:CDS
TGGAGGGAGAGGTAGCCAAA+TGG 0.596344 7_3:+15929759 None:intergenic
CATGCCTAATGGCAAATCCA+AGG 0.600402 7_3:-15930452 Msa1094360:intron
ATACCAATAAGGAACTACAT+AGG 0.600755 7_3:+15928257 None:intergenic
GGTAGTAATTGAATGTATGA+AGG 0.601567 7_3:+15928515 None:intergenic
TACTTGGATTGAACATGTTG+AGG 0.602638 7_3:-15930315 Msa1094360:CDS
CGAACGAAGGATGGTCTAAG+TGG 0.602970 7_3:-15930835 Msa1094360:CDS
CAAATTGTTTACAGTAACGT+AGG 0.603339 7_3:+15930581 None:intergenic
TAAACAATTTGAGAAAGGAT+GGG 0.603561 7_3:-15930569 Msa1094360:CDS
AATTGAACACAGTTTGTGGA+GGG 0.607093 7_3:+15929743 None:intergenic
AAATGCTCGACTCAAAGAAG+AGG 0.608954 7_3:-15931993 Msa1094360:intron
AATTCTCTAATAGGAACAAG+TGG 0.613864 7_3:+15930610 None:intergenic
GTTAGGCAAGGAATTAGCCA+TGG 0.615783 7_3:-15932327 Msa1094360:CDS
GGATCTGATCAGCAGTGTGA+CGG 0.618661 7_3:+15932898 None:intergenic
TATTAGAGAGACCAGCAGGT+TGG 0.619511 7_3:+15931277 None:intergenic
AAATTGAACACAGTTTGTGG+AGG 0.620718 7_3:+15929742 None:intergenic
CTTATGGAGCATCACAGTGA+AGG 0.621938 7_3:-15932966 Msa1094360:CDS
CTTATGGAGCATCACAGTGA+AGG 0.621938 7_3:-15933008 Msa1094360:CDS
GAGTAGTTTACCATCTAACA+TGG 0.623707 7_3:-15928348 Msa1094360:CDS
ACACTGCTGATCAGATCCAA+AGG 0.630792 7_3:-15932893 Msa1094360:CDS
GGACTCATCAGGTTCACTTG+TGG 0.637914 7_3:-15928579 Msa1094360:CDS
AAACATTTCAACCAAAGTCG+AGG 0.640163 7_3:+15931032 None:intergenic
ACACGGAAATGCAGTTACCT+GGG 0.640174 7_3:+15929217 None:intergenic
GAAGAGTCAGCCTAATGGTG+AGG 0.665543 7_3:-15929800 Msa1094360:CDS
CATTCCGGTCATATCGAAGG+AGG 0.675235 7_3:-15930161 Msa1094360:intron
GATACTACAAGAAAGTTGTG+TGG 0.680749 7_3:-15928600 Msa1094360:CDS
AATGATAATAATATTCAAGG+AGG 0.684472 7_3:-15928458 Msa1094360:CDS
GAACTTCCTGGTAAAAGGTG+TGG 0.687398 7_3:+15931324 None:intergenic
AGAATGTCTTACCTTAAACA+CGG 0.688574 7_3:+15929200 None:intergenic
CTTTGAATGAGATTATTGTG+AGG 0.708508 7_3:-15929822 Msa1094360:CDS
AGCAACCGGAAGGAAGACGA+AGG 0.713060 7_3:+15930485 None:intergenic
CCATGATGAAGCTAACACAA+AGG 0.718830 7_3:-15929909 Msa1094360:CDS
TGATTCATCAATAATGAACG+AGG 0.729923 7_3:-15928543 Msa1094360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAAATAAATAAATAAA+GGG + chr7_3:15928459-15928478 None:intergenic 0.0%
!! ATAAATAAATAAATAAATAA+AGG + chr7_3:15928460-15928479 None:intergenic 0.0%
!!! TGTTTTTTTAAATCATATTA+GGG - chr7_3:15929033-15929052 Msa1094360:intron 10.0%
!!! TTTAAAAACATTTTTTTTTC+TGG + chr7_3:15929513-15929532 None:intergenic 10.0%
!! AAAAAAAAAAAAAGTTTGTA+TGG - chr7_3:15929592-15929611 Msa1094360:intron 10.0%
!!! TTAAATATAGTTTAAAATTG+CGG - chr7_3:15929665-15929684 Msa1094360:intron 10.0%
!!! TAAAAGAATTTTAGAAATTA+AGG + chr7_3:15929778-15929797 None:intergenic 10.0%
!!! TCTTGTATATTTTAATTTAT+AGG - chr7_3:15930937-15930956 Msa1094360:intron 10.0%
!!! GTGTTTTTTTAAATCATATT+AGG - chr7_3:15929032-15929051 Msa1094360:intron 15.0%
!!! AGATTGTGAATTAATTTTAT+AGG - chr7_3:15929627-15929646 Msa1094360:intron 15.0%
!!! TATATTTTACCATAATAGAA+AGG + chr7_3:15929703-15929722 None:intergenic 15.0%
!! TTTCTATTATGGTAAAATAT+AGG - chr7_3:15929702-15929721 Msa1094360:intron 15.0%
!! ATTTATGTGGTAAATTAAAA+TGG - chr7_3:15929861-15929880 Msa1094360:CDS 15.0%
!!! ATTTTAGATTTATTTTTGTG+TGG - chr7_3:15930521-15930540 Msa1094360:CDS 15.0%
!!! CAATAATATTTTTAGATGTA+TGG - chr7_3:15930624-15930643 Msa1094360:CDS 15.0%
!!! ATTTTAATTTATAGGTTACT+TGG - chr7_3:15930945-15930964 Msa1094360:intron 15.0%
!! TATAAAAATGTTATCAATAG+TGG - chr7_3:15931013-15931032 Msa1094360:intron 15.0%
!! ATAATAATAATAATTGAGTC+TGG + chr7_3:15931617-15931636 None:intergenic 15.0%
!! ATAAAAAAACAAATAAATGG+AGG + chr7_3:15932103-15932122 None:intergenic 15.0%
!! CAAAATGATAATAATATTCA+AGG - chr7_3:15932815-15932834 Msa1094360:intron 15.0%
!! TATTTATTTATACGACACTT+AGG - chr7_3:15928469-15928488 Msa1094360:CDS 20.0%
!!! TAATACATGCACAATTTTAA+TGG - chr7_3:15929365-15929384 Msa1094360:intron 20.0%
!! AAATCTAAACTAACATTCTA+AGG + chr7_3:15929454-15929473 None:intergenic 20.0%
!!! AGATTTTGTAGTTTTCTTTT+TGG - chr7_3:15929468-15929487 Msa1094360:intron 20.0%
!!! GATTTTGTAGTTTTCTTTTT+GGG - chr7_3:15929469-15929488 Msa1094360:intron 20.0%
!!! ATTTTGCTTTTATTGAAACT+TGG + chr7_3:15929556-15929575 None:intergenic 20.0%
!!! TGTTGTATTTTGTATTTATG+TGG - chr7_3:15929848-15929867 Msa1094360:CDS 20.0%
!! CAATTAAAAGTTAATTACCT+TGG + chr7_3:15930844-15930863 None:intergenic 20.0%
!!! ACTATAAAATCTCATTTTGT+TGG - chr7_3:15930867-15930886 Msa1094360:CDS 20.0%
!!! TTTTATAAAGCATATGAACT+GGG + chr7_3:15931000-15931019 None:intergenic 20.0%
!!! TTTTTATAAAGCATATGAAC+TGG + chr7_3:15931001-15931020 None:intergenic 20.0%
!!! TCACAATATAAATGTTTTAG+AGG - chr7_3:15931175-15931194 Msa1094360:CDS 20.0%
!! TAGATATAATACAATAAGCA+GGG + chr7_3:15931860-15931879 None:intergenic 20.0%
!! ATAGATATAATACAATAAGC+AGG + chr7_3:15931861-15931880 None:intergenic 20.0%
!!! TAGTTGTTTCTATTGAAAAT+GGG + chr7_3:15932279-15932298 None:intergenic 20.0%
!!! TTAGTTGTTTCTATTGAAAA+TGG + chr7_3:15932280-15932299 None:intergenic 20.0%
!!! TTAGAAAAACTCTTTTTTGT+CGG + chr7_3:15932353-15932372 None:intergenic 20.0%
!!! ACGAAAATTTTCTGTTTTTA+TGG + chr7_3:15932579-15932598 None:intergenic 20.0%
!!! TAAAAACAGAAAATTTTCGT+CGG - chr7_3:15932579-15932598 Msa1094360:intron 20.0%
!!! TTTTGTTAATCTGCAAATAT+AGG - chr7_3:15932625-15932644 Msa1094360:intron 20.0%
!! TTTGTTAATCTGCAAATATA+GGG - chr7_3:15932626-15932645 Msa1094360:intron 20.0%
!! AATGATAATAATATTCAAGG+AGG - chr7_3:15932818-15932837 Msa1094360:intron 20.0%
!!! CTATTTGTTTTTGACACTTT+TGG - chr7_3:15928671-15928690 Msa1094360:intron 25.0%
!! ATCCTACTAAGATCAAATTT+TGG - chr7_3:15928972-15928991 Msa1094360:intron 25.0%
! AACCAAAATTTGATCTTAGT+AGG + chr7_3:15928977-15928996 None:intergenic 25.0%
!!! AATTTTGGTTTCAGAATAGA+AGG - chr7_3:15928987-15929006 Msa1094360:intron 25.0%
!!! TGTTTTAGTCTTTTAGACAT+GGG - chr7_3:15929065-15929084 Msa1094360:intron 25.0%
!! GCTGCAAATAACATTTTTAA+GGG + chr7_3:15929234-15929253 None:intergenic 25.0%
!! TGCTGCAAATAACATTTTTA+AGG + chr7_3:15929235-15929254 None:intergenic 25.0%
!!! TTTTTTTTCTGGTACAAAAG+AGG + chr7_3:15929502-15929521 None:intergenic 25.0%
!!! TTTTATTGAAACTTGGTAGT+TGG + chr7_3:15929549-15929568 None:intergenic 25.0%
! CAATGTAAACCTTTCTATTA+TGG - chr7_3:15929691-15929710 Msa1094360:intron 25.0%
! TTGTAGTTAAAATGTTGTTG+CGG - chr7_3:15929749-15929768 Msa1094360:CDS 25.0%
!!! GTAAACATGGTTTTAAATTG+CGG + chr7_3:15929825-15929844 None:intergenic 25.0%
! AAATACAACACATGTAAACA+TGG + chr7_3:15929838-15929857 None:intergenic 25.0%
! TTAACTGATTATTAACCCTA+GGG + chr7_3:15930167-15930186 None:intergenic 25.0%
! TTTAACTGATTATTAACCCT+AGG + chr7_3:15930168-15930187 None:intergenic 25.0%
! AGGAAGTAAAATTCTCTAAT+AGG + chr7_3:15930678-15930697 None:intergenic 25.0%
! TACTGTAAACAATTTGAGAA+AGG - chr7_3:15930702-15930721 Msa1094360:intron 25.0%
! TAAACAATTTGAGAAAGGAT+GGG - chr7_3:15930707-15930726 Msa1094360:intron 25.0%
! ATCAAGTATTTAACAAACCT+GGG + chr7_3:15931583-15931602 None:intergenic 25.0%
! TAATAATAATTGAGTCTGGA+GGG + chr7_3:15931613-15931632 None:intergenic 25.0%
! ATAATAATAATTGAGTCTGG+AGG + chr7_3:15931614-15931633 None:intergenic 25.0%
!! TATCTTTGAAAAATGTGAAG+CGG - chr7_3:15931760-15931779 Msa1094360:intron 25.0%
! TGAAATACCTTAGAGTTAAA+AGG - chr7_3:15931936-15931955 Msa1094360:intron 25.0%
!!! AAGAAAACCTTTTAACTCTA+AGG + chr7_3:15931946-15931965 None:intergenic 25.0%
!!! TAGATAGAGAGACTTATTTT+AGG + chr7_3:15932200-15932219 None:intergenic 25.0%
!! GAGTTCACAAATTTTAAATG+TGG + chr7_3:15932536-15932555 None:intergenic 25.0%
! TTCATTATTGATGAATCAAC+AGG + chr7_3:15932731-15932750 None:intergenic 25.0%
! AACAGTTGCATTTCAAATTA+TGG - chr7_3:15932904-15932923 Msa1094360:CDS 25.0%
! TGTTTCTTCTAAGAGACTTA+TGG - chr7_3:15928294-15928313 Msa1094360:CDS 30.0%
TTTCTTCTGATACTCATAAG+AGG - chr7_3:15928338-15928357 Msa1094360:CDS 30.0%
GCATGCAATGTTATGATATA+CGG - chr7_3:15928491-15928510 Msa1094360:CDS 30.0%
CAATGTTATGATATACGGAT+GGG - chr7_3:15928496-15928515 Msa1094360:CDS 30.0%
GCTTCTATATAGAGTTCAAA+GGG - chr7_3:15928693-15928712 Msa1094360:intron 30.0%
AATGTTGTGTTTACGAAGAT+TGG - chr7_3:15928751-15928770 Msa1094360:intron 30.0%
ATGTTGTGTTTACGAAGATT+GGG - chr7_3:15928752-15928771 Msa1094360:intron 30.0%
CATATCCTGATGAAAAACAA+AGG - chr7_3:15928921-15928940 Msa1094360:intron 30.0%
!!! GTGTTTTAGTCTTTTAGACA+TGG - chr7_3:15929064-15929083 Msa1094360:intron 30.0%
GATTTCACAATGATTCTTTG+TGG - chr7_3:15929106-15929125 Msa1094360:intron 30.0%
! ACAATGATTCTTTGTGGTTT+TGG - chr7_3:15929112-15929131 Msa1094360:intron 30.0%
CATTCTCTTCTATGAGTATA+CGG + chr7_3:15929175-15929194 None:intergenic 30.0%
! ACACAATTCTTTTGCATTAG+TGG + chr7_3:15929332-15929351 None:intergenic 30.0%
AAGAGAATATTGTGCATGTA+TGG + chr7_3:15929406-15929425 None:intergenic 30.0%
AAGGAAAAATCACTCATGTT+TGG - chr7_3:15930021-15930040 Msa1094360:intron 30.0%
! GTGTTTGATTTCATCCATAA+AGG + chr7_3:15930099-15930118 None:intergenic 30.0%
ACATTGTTTCATAGGTTTCA+AGG + chr7_3:15930143-15930162 None:intergenic 30.0%
GACTTTGGTTGAAATGTTTA+TGG - chr7_3:15930248-15930267 Msa1094360:CDS 30.0%
AAAGAGTAAGAAGTTCTTAC+AGG + chr7_3:15930276-15930295 None:intergenic 30.0%
!! GATTGATTTTGTAGAACAAG+TGG - chr7_3:15930361-15930380 Msa1094360:intron 30.0%
ATTTCCAACTATTGTGACAA+TGG - chr7_3:15930392-15930411 Msa1094360:intron 30.0%
ATTCAATGTGCAAGAGAAAT+TGG + chr7_3:15930593-15930612 None:intergenic 30.0%
AATTCTCTAATAGGAACAAG+TGG + chr7_3:15930669-15930688 None:intergenic 30.0%
CAAATTGTTTACAGTAACGT+AGG + chr7_3:15930698-15930717 None:intergenic 30.0%
GTAAACAATTTGAGAAAGGA+TGG - chr7_3:15930706-15930725 Msa1094360:intron 30.0%
!! GAAGCAAAATGTTTGTTATG+AGG + chr7_3:15930759-15930778 None:intergenic 30.0%
! TGAAAAGCTTGCTTATCTTA+TGG - chr7_3:15931084-15931103 Msa1094360:CDS 30.0%
GGAGGTAGCTATATAATTTA+TGG - chr7_3:15931133-15931152 Msa1094360:CDS 30.0%
ATGGTTTCAAATTGTAGTTG+CGG - chr7_3:15931152-15931171 Msa1094360:CDS 30.0%
TTGTAATGTAACCACAATTG+TGG - chr7_3:15931201-15931220 Msa1094360:CDS 30.0%
!! CTCATTCAAAGTTGATAATG+TGG + chr7_3:15931445-15931464 None:intergenic 30.0%
CTTTGAATGAGATTATTGTG+AGG - chr7_3:15931454-15931473 Msa1094360:intron 30.0%
AAGAAATTGAACACAGTTTG+TGG + chr7_3:15931540-15931559 None:intergenic 30.0%
GATCAAGTATTTAACAAACC+TGG + chr7_3:15931584-15931603 None:intergenic 30.0%
CATATTAAGAGGTGAAATTC+TGG + chr7_3:15931804-15931823 None:intergenic 30.0%
CCTCACTTATTCATATTAAG+AGG + chr7_3:15931815-15931834 None:intergenic 30.0%
CCTCTTAATATGAATAAGTG+AGG - chr7_3:15931812-15931831 Msa1094360:intron 30.0%
GGATTTATGAGTTCAAACTT+TGG - chr7_3:15931833-15931852 Msa1094360:intron 30.0%
AGAATGTCTTACCTTAAACA+CGG + chr7_3:15932079-15932098 None:intergenic 30.0%
AAATGGTATAAGGTCCTAAA+TGG + chr7_3:15932401-15932420 None:intergenic 30.0%
GAGTTACTCTAAATGGTATA+AGG + chr7_3:15932411-15932430 None:intergenic 30.0%
TCTGTTAGAGTTACTCTAAA+TGG + chr7_3:15932418-15932437 None:intergenic 30.0%
TTATGGTTTAAGTAGTCTAG+TGG + chr7_3:15932562-15932581 None:intergenic 30.0%
! AGAAAATTTTCGTCGGATTT+TGG - chr7_3:15932586-15932605 Msa1094360:intron 30.0%
TGATTCATCAATAATGAACG+AGG - chr7_3:15932733-15932752 Msa1094360:intron 30.0%
GGTAGTAATTGAATGTATGA+AGG + chr7_3:15932764-15932783 None:intergenic 30.0%
TACATTCAATTACTACCATC+AGG - chr7_3:15932767-15932786 Msa1094360:intron 30.0%
CCAATAAGTCCATTAACAAT+TGG + chr7_3:15932962-15932981 None:intergenic 30.0%
!! CCAATTGTTAATGGACTTAT+TGG - chr7_3:15932959-15932978 Msa1094360:CDS 30.0%
GCAATGTTATGATATACGGA+TGG - chr7_3:15928495-15928514 Msa1094360:CDS 35.0%
GGCTTCTATATAGAGTTCAA+AGG - chr7_3:15928692-15928711 Msa1094360:intron 35.0%
ACAACAATGTCATGACTCAT+AGG - chr7_3:15928722-15928741 Msa1094360:intron 35.0%
CTTCGTAAACACAACATTCA+TGG + chr7_3:15928749-15928768 None:intergenic 35.0%
TGCAATTCAAAAAGACCTGA+CGG - chr7_3:15928777-15928796 Msa1094360:intron 35.0%
!!! TGCAACCTTTGTTTTTCATC+AGG + chr7_3:15928929-15928948 None:intergenic 35.0%
GAAAAACAAAGGTTGCAGTT+AGG - chr7_3:15928932-15928951 Msa1094360:intron 35.0%
TTTGATCTTAGTAGGATCCA+TGG + chr7_3:15928969-15928988 None:intergenic 35.0%
GATCTGAGAATATAGCTATG+AGG - chr7_3:15929204-15929223 Msa1094360:intron 35.0%
TACAATATCAACCGCATCAA+GGG + chr7_3:15929734-15929753 None:intergenic 35.0%
TTGATGAACTTCCTGGTAAA+AGG + chr7_3:15929960-15929979 None:intergenic 35.0%
TGGAAACTAATGAGCCTTTA+TGG - chr7_3:15930082-15930101 Msa1094360:intron 35.0%
TGGATGAAATCAAACACTGA+TGG - chr7_3:15930102-15930121 Msa1094360:intron 35.0%
CTATGAAACAATGTTCCCTA+GGG - chr7_3:15930149-15930168 Msa1094360:intron 35.0%
! ATCGAAGCTTCTAGAAATTC+TGG - chr7_3:15930204-15930223 Msa1094360:CDS 35.0%
AAACATTTCAACCAAAGTCG+AGG + chr7_3:15930247-15930266 None:intergenic 35.0%
! GATTTTGTAGAACAAGTGGA+TGG - chr7_3:15930365-15930384 Msa1094360:intron 35.0%
TTTGCCATTGTCACAATAGT+TGG + chr7_3:15930399-15930418 None:intergenic 35.0%
AGTTATATCTTCTCGAACGA+AGG - chr7_3:15930428-15930447 Msa1094360:intron 35.0%
TCTAAGTGGTTCTTTGCAAT+TGG - chr7_3:15930455-15930474 Msa1094360:CDS 35.0%
! CATTTTGCTTCGAAATTTCG+AGG - chr7_3:15930768-15930787 Msa1094360:intron 35.0%
TTCATCCAAAACATGCCTAA+TGG - chr7_3:15930813-15930832 Msa1094360:intron 35.0%
! ATTTGCCATTAGGCATGTTT+TGG + chr7_3:15930821-15930840 None:intergenic 35.0%
ATTACCTTGGATTTGCCATT+AGG + chr7_3:15930831-15930850 None:intergenic 35.0%
TACTTGGATTGAACATGTTG+AGG - chr7_3:15930961-15930980 Msa1094360:intron 35.0%
! ATCAATAGTGGAGTTGCATT+TGG - chr7_3:15931025-15931044 Msa1094360:CDS 35.0%
! TTGCATTTGGAGCTGAAAAA+TGG - chr7_3:15931038-15931057 Msa1094360:CDS 35.0%
CTTGCTTATCTTATGGATTC+AGG - chr7_3:15931091-15931110 Msa1094360:CDS 35.0%
ACAATTGTGGCTACATTTGT+CGG - chr7_3:15931214-15931233 Msa1094360:CDS 35.0%
! GGTATTTTACCGCAAGATAA+AGG - chr7_3:15931235-15931254 Msa1094360:CDS 35.0%
TTCTTGTCTTGATCTAAGTG+TGG - chr7_3:15931299-15931318 Msa1094360:CDS 35.0%
CTTGATCTAAGTGTGGTTAT+TGG - chr7_3:15931306-15931325 Msa1094360:CDS 35.0%
AATTGAACACAGTTTGTGGA+GGG + chr7_3:15931536-15931555 None:intergenic 35.0%
AAATTGAACACAGTTTGTGG+AGG + chr7_3:15931537-15931556 None:intergenic 35.0%
TAGTCGAATGTACTTTCCAA+TGG - chr7_3:15931994-15932013 Msa1094360:CDS 35.0%
CTCTTGAACATCATTACCAT+TGG + chr7_3:15932013-15932032 None:intergenic 35.0%
! CAATGGTAATGATGTTCAAG+AGG - chr7_3:15932011-15932030 Msa1094360:CDS 35.0%
TAACTGCATTTCCGTGTTTA+AGG - chr7_3:15932065-15932084 Msa1094360:CDS 35.0%
CTCGTTAAAAGAGTCCATTT+AGG - chr7_3:15932384-15932403 Msa1094360:intron 35.0%
TAACAATTAAGCCAAGCTCA+CGG + chr7_3:15932456-15932475 None:intergenic 35.0%
TGAGCTTGGCTTAATTGTTA+GGG - chr7_3:15932456-15932475 Msa1094360:intron 35.0%
GACGTTGCATAATATATGCA+GGG - chr7_3:15932478-15932497 Msa1094360:intron 35.0%
GATACTACAAGAAAGTTGTG+TGG - chr7_3:15932676-15932695 Msa1094360:intron 35.0%
CAAGGAGGTAATAGTGATAA+TGG - chr7_3:15932833-15932852 Msa1094360:intron 35.0%
ACAATGATCCTCCAATGTTT+GGG + chr7_3:15932883-15932902 None:intergenic 35.0%
AACAATGATCCTCCAATGTT+TGG + chr7_3:15932884-15932903 None:intergenic 35.0%
GAGTAGTTTACCATCTAACA+TGG - chr7_3:15932928-15932947 Msa1094360:CDS 35.0%
GAGTCTGTTCCAATTGTTAA+TGG - chr7_3:15932950-15932969 Msa1094360:CDS 35.0%
! TCAAAGCAGCTTTTATGTGT+TGG + chr7_3:15932994-15933013 None:intergenic 35.0%
TACGAGGAAACATGTATGTG+TGG - chr7_3:15928519-15928538 Msa1094360:CDS 40.0%
CATGTATGTGTGGATTTGAC+CGG - chr7_3:15928529-15928548 Msa1094360:CDS 40.0%
ATGTATGTGTGGATTTGACC+GGG - chr7_3:15928530-15928549 Msa1094360:CDS 40.0%
! TTTTACCACTCGTGGGATTA+GGG - chr7_3:15928553-15928572 Msa1094360:CDS 40.0%
! ATTAGGGGACATGGCTTTTA+CGG - chr7_3:15928569-15928588 Msa1094360:CDS 40.0%
AGAACACGCTTTCTCATGTT+TGG + chr7_3:15928630-15928649 None:intergenic 40.0%
GAATAGAAGGACTCAGATGA+AGG - chr7_3:15929000-15929019 Msa1094360:intron 40.0%
AAATGCTCGACTCAAAGAAG+AGG - chr7_3:15929283-15929302 Msa1094360:intron 40.0%
!! ATTCTAAGGCATGCAAGTGT+CGG + chr7_3:15929440-15929459 None:intergenic 40.0%
ATAGGAAAATGCCCTTGATG+CGG - chr7_3:15929720-15929739 Msa1094360:CDS 40.0%
CTACAATATCAACCGCATCA+AGG + chr7_3:15929735-15929754 None:intergenic 40.0%
TGAAAATGCAATGCAAGAGC+TGG - chr7_3:15930050-15930069 Msa1094360:intron 40.0%
CCTAGGGAACATTGTTTCAT+AGG + chr7_3:15930151-15930170 None:intergenic 40.0%
CCTATGAAACAATGTTCCCT+AGG - chr7_3:15930148-15930167 Msa1094360:intron 40.0%
GAAGCTTCGATGCGAATATT+GGG + chr7_3:15930195-15930214 None:intergenic 40.0%
AGAAGCTTCGATGCGAATAT+TGG + chr7_3:15930196-15930215 None:intergenic 40.0%
ATATCTTCTCGAACGAAGGA+TGG - chr7_3:15930432-15930451 Msa1094360:intron 40.0%
!! CATGTTTTGGATGAAGCAAC+CGG + chr7_3:15930808-15930827 None:intergenic 40.0%
GACAAATGTAGCCACAATTG+TGG + chr7_3:15931215-15931234 None:intergenic 40.0%
GTGTGTGAACCTTTATCTTG+CGG + chr7_3:15931247-15931266 None:intergenic 40.0%
TCAGTGATTTCATCACCTGA+TGG - chr7_3:15931336-15931355 Msa1094360:CDS 40.0%
TTTCATCACCTGATGGAAAG+AGG - chr7_3:15931343-15931362 Msa1094360:CDS 40.0%
! CCTTTGTGTTAGCTTCATCA+TGG + chr7_3:15931370-15931389 None:intergenic 40.0%
CCATGATGAAGCTAACACAA+AGG - chr7_3:15931367-15931386 Msa1094360:CDS 40.0%
GATGAAGCTAACACAAAGGA+TGG - chr7_3:15931371-15931390 Msa1094360:CDS 40.0%
ATGCATCAGCTAGTCATAGA+TGG - chr7_3:15931418-15931437 Msa1094360:intron 40.0%
TAAGCGCATCTACTACCATT+TGG - chr7_3:15931502-15931521 Msa1094360:intron 40.0%
CGATGAAAGAAAAAGATCCC+AGG - chr7_3:15931563-15931582 Msa1094360:intron 40.0%
AGTACATTCGCTAGTACATG+CGG + chr7_3:15932251-15932270 None:intergenic 40.0%
AACAATTAAGCCAAGCTCAC+GGG + chr7_3:15932455-15932474 None:intergenic 40.0%
GTGAGCTTGGCTTAATTGTT+AGG - chr7_3:15932455-15932474 Msa1094360:intron 40.0%
GGACGTTGCATAATATATGC+AGG - chr7_3:15932477-15932496 Msa1094360:intron 40.0%
GGTTTAAGTAGTCTAGTGGT+TGG + chr7_3:15932558-15932577 None:intergenic 40.0%
GAAGTAATTGCGAAACCTGA+TGG + chr7_3:15932785-15932804 None:intergenic 40.0%
GGTTTCGCAATTACTTCTGA+TGG - chr7_3:15932788-15932807 Msa1094360:intron 40.0%
ACAAGCTCAAACCCAAACAT+TGG - chr7_3:15932869-15932888 Msa1094360:intron 40.0%
! CTTATGGAGCATCACAGTGA+AGG - chr7_3:15928310-15928329 Msa1094360:CDS 45.0%
ACACTGCTGATCAGATCCAA+AGG - chr7_3:15928383-15928402 Msa1094360:CDS 45.0%
ACTCTTACGCTTCAAGCCTT+TGG + chr7_3:15928402-15928421 None:intergenic 45.0%
ATGATATACGGATGGGTACG+AGG - chr7_3:15928503-15928522 Msa1094360:CDS 45.0%
! GTTTTACCACTCGTGGGATT+AGG - chr7_3:15928552-15928571 Msa1094360:CDS 45.0%
TTTACCACTCGTGGGATTAG+GGG - chr7_3:15928554-15928573 Msa1094360:CDS 45.0%
ACAAAGGTTGCAGTTAGGCA+AGG - chr7_3:15928937-15928956 Msa1094360:intron 45.0%
GTTAGGCAAGGAATTAGCCA+TGG - chr7_3:15928949-15928968 Msa1094360:intron 45.0%
GAACTTCCTGGTAAAAGGTG+TGG + chr7_3:15929955-15929974 None:intergenic 45.0%
! GGCAATGTTGATGAACTTCC+TGG + chr7_3:15929967-15929986 None:intergenic 45.0%
!! GCAGGTTGGTAAGGAACATT+TGG + chr7_3:15929988-15930007 None:intergenic 45.0%
AATGTTCCTTACCAACCTGC+TGG - chr7_3:15929988-15930007 Msa1094360:intron 45.0%
TATTAGAGAGACCAGCAGGT+TGG + chr7_3:15930002-15930021 None:intergenic 45.0%
! ACCTGCTGGTCTCTCTAATA+AGG - chr7_3:15930002-15930021 Msa1094360:intron 45.0%
TCCTTATTAGAGAGACCAGC+AGG + chr7_3:15930006-15930025 None:intergenic 45.0%
!!! GCAAGAGCTGGTTTTGCTTA+TGG - chr7_3:15930062-15930081 Msa1094360:intron 45.0%
TGTCATGAATGCCTCGACTT+TGG - chr7_3:15930233-15930252 Msa1094360:CDS 45.0%
! TTTTGGATGAAGCAACCGGA+AGG + chr7_3:15930804-15930823 None:intergenic 45.0%
CATGCCTAATGGCAAATCCA+AGG - chr7_3:15930824-15930843 Msa1094360:CDS 45.0%
CTTATGGATTCAGGCCATTC+CGG - chr7_3:15931100-15931119 Msa1094360:CDS 45.0%
ATCATGGTCCTCTTTCCATC+AGG + chr7_3:15931354-15931373 None:intergenic 45.0%
ACACGGAAATGCAGTTACCT+GGG + chr7_3:15932062-15932081 None:intergenic 45.0%
AACACGGAAATGCAGTTACC+TGG + chr7_3:15932063-15932082 None:intergenic 45.0%
CAGGAATGGGGGAAACAAAA+TGG + chr7_3:15932130-15932149 None:intergenic 45.0%
!! TTTTGTTTCCCCCATTCCTG+AGG - chr7_3:15932130-15932149 Msa1094360:CDS 45.0%
TTTGTTTCCCCCATTCCTGA+GGG - chr7_3:15932131-15932150 Msa1094360:intron 45.0%
ACAATTAAGCCAAGCTCACG+GGG + chr7_3:15932454-15932473 None:intergenic 45.0%
AGGGATCAAAGTTCGAATCC+CGG - chr7_3:15932497-15932516 Msa1094360:intron 45.0%
ATGTGGAGAAGTGAGATGTC+CGG + chr7_3:15932519-15932538 None:intergenic 45.0%
GAAAGTTGTGTGGACTCATC+AGG - chr7_3:15932686-15932705 Msa1094360:intron 45.0%
AGCTCAAACCCAAACATTGG+AGG - chr7_3:15932872-15932891 Msa1094360:intron 45.0%
GGAACAGACTCCATGTTAGA+TGG + chr7_3:15932941-15932960 None:intergenic 45.0%
!!! ACTTTTTTATTTTATTTTTT+AGG - chr7_3:15928882-15928901 Msa1094360:intron 5.0%
!!! CTTTTTTATTTTATTTTTTA+GGG - chr7_3:15928883-15928902 Msa1094360:intron 5.0%
!! TAAATAAAAAAACAAATAAA+TGG + chr7_3:15932106-15932125 None:intergenic 5.0%
GGATCTGATCAGCAGTGTGA+CGG + chr7_3:15928381-15928400 None:intergenic 50.0%
ATCCCACGAGTGGTAAAACC+CGG + chr7_3:15928551-15928570 None:intergenic 50.0%
! TCACTGCCACACCTTTTACC+AGG - chr7_3:15929946-15929965 Msa1094360:intron 50.0%
CGAACGAAGGATGGTCTAAG+TGG - chr7_3:15930441-15930460 Msa1094360:intron 50.0%
CTCCTTCGATATGACCGGAA+TGG + chr7_3:15931117-15931136 None:intergenic 50.0%
CATTCCGGTCATATCGAAGG+AGG - chr7_3:15931115-15931134 Msa1094360:CDS 50.0%
GCTACCTCCTTCGATATGAC+CGG + chr7_3:15931122-15931141 None:intergenic 50.0%
GTGAGGAAGAGTCAGCCTAA+TGG - chr7_3:15931471-15931490 Msa1094360:intron 50.0%
GAAGAGTCAGCCTAATGGTG+AGG - chr7_3:15931476-15931495 Msa1094360:intron 50.0%
AACACAGTTTGTGGAGGGAG+AGG + chr7_3:15931531-15931550 None:intergenic 50.0%
ATAGCAAATGTTTCGCGCCC+AGG - chr7_3:15932042-15932061 Msa1094360:CDS 50.0%
TGAAGGACACCCTCAGGAAT+GGG + chr7_3:15932143-15932162 None:intergenic 50.0%
CTACGTCACAGTTGAGCTGA+AGG + chr7_3:15932160-15932179 None:intergenic 50.0%
TCAGCTCAACTGTGACGTAG+AGG - chr7_3:15932160-15932179 Msa1094360:intron 50.0%
TGTGGAGAAGTGAGATGTCC+GGG + chr7_3:15932518-15932537 None:intergenic 50.0%
GGACTCATCAGGTTCACTTG+TGG - chr7_3:15932697-15932716 Msa1094360:intron 50.0%
! TGACCGGGTTTTACCACTCG+TGG - chr7_3:15928545-15928564 Msa1094360:CDS 55.0%
! GACCGGGTTTTACCACTCGT+GGG - chr7_3:15928546-15928565 Msa1094360:CDS 55.0%
ATGTCCCCTAATCCCACGAG+TGG + chr7_3:15928561-15928580 None:intergenic 55.0%
ACTCGTGGGATTAGGGGACA+TGG - chr7_3:15928560-15928579 Msa1094360:CDS 55.0%
TGACAACAAGCTGCACCGTC+AGG + chr7_3:15928795-15928814 None:intergenic 55.0%
!! GAGAGACCAGCAGGTTGGTA+AGG + chr7_3:15929997-15930016 None:intergenic 55.0%
AGCAACCGGAAGGAAGACGA+AGG + chr7_3:15930794-15930813 None:intergenic 55.0%
GGCCATTCCGGTCATATCGA+AGG - chr7_3:15931112-15931131 Msa1094360:CDS 55.0%
GCGCTTAGCACCTCACCATT+AGG + chr7_3:15931489-15931508 None:intergenic 55.0%
TGGAGGGAGAGGTAGCCAAA+TGG + chr7_3:15931520-15931539 None:intergenic 55.0%
AAGGACACCCTCAGGAATGG+GGG + chr7_3:15932141-15932160 None:intergenic 55.0%
GAAGGACACCCTCAGGAATG+GGG + chr7_3:15932142-15932161 None:intergenic 55.0%
CTGAAGGACACCCTCAGGAA+TGG + chr7_3:15932144-15932163 None:intergenic 55.0%
TTGAGCTGAAGGACACCCTC+AGG + chr7_3:15932149-15932168 None:intergenic 55.0%
CGAGGCCTTCGTCTTCCTTC+CGG - chr7_3:15930786-15930805 Msa1094360:intron 60.0%
TGTCGTCGACCCCGTGAGCT+TGG - chr7_3:15932442-15932461 Msa1094360:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 15928271 15933027 15928271 ID=Msa1094360;Name=Msa1094360
chr7_3 mRNA 15928271 15933027 15928271 ID=Msa1094360-mRNA-1;Parent=Msa1094360;Name=Msa1094360-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|1|1|10|0|663
chr7_3 exon 15932885 15933027 15932885 ID=Msa1094360-mRNA-1:exon:3581;Parent=Msa1094360-mRNA-1
chr7_3 exon 15932277 15932394 15932277 ID=Msa1094360-mRNA-1:exon:3580;Parent=Msa1094360-mRNA-1
chr7_3 exon 15931994 15932149 15931994 ID=Msa1094360-mRNA-1:exon:3579;Parent=Msa1094360-mRNA-1
chr7_3 exon 15931023 15931394 15931023 ID=Msa1094360-mRNA-1:exon:3578;Parent=Msa1094360-mRNA-1
chr7_3 exon 15930822 15930923 15930822 ID=Msa1094360-mRNA-1:exon:3577;Parent=Msa1094360-mRNA-1
chr7_3 exon 15930453 15930659 15930453 ID=Msa1094360-mRNA-1:exon:3576;Parent=Msa1094360-mRNA-1
chr7_3 exon 15930162 15930339 15930162 ID=Msa1094360-mRNA-1:exon:3575;Parent=Msa1094360-mRNA-1
chr7_3 exon 15929714 15929958 15929714 ID=Msa1094360-mRNA-1:exon:3574;Parent=Msa1094360-mRNA-1
chr7_3 exon 15929212 15929301 15929212 ID=Msa1094360-mRNA-1:exon:3573;Parent=Msa1094360-mRNA-1
chr7_3 exon 15928271 15928651 15928271 ID=Msa1094360-mRNA-1:exon:3572;Parent=Msa1094360-mRNA-1
chr7_3 CDS 15932885 15933027 15932885 ID=Msa1094360-mRNA-1:cds;Parent=Msa1094360-mRNA-1
chr7_3 CDS 15932277 15932394 15932277 ID=Msa1094360-mRNA-1:cds;Parent=Msa1094360-mRNA-1
chr7_3 CDS 15931994 15932149 15931994 ID=Msa1094360-mRNA-1:cds;Parent=Msa1094360-mRNA-1
chr7_3 CDS 15931023 15931394 15931023 ID=Msa1094360-mRNA-1:cds;Parent=Msa1094360-mRNA-1
chr7_3 CDS 15930822 15930923 15930822 ID=Msa1094360-mRNA-1:cds;Parent=Msa1094360-mRNA-1
chr7_3 CDS 15930453 15930659 15930453 ID=Msa1094360-mRNA-1:cds;Parent=Msa1094360-mRNA-1
chr7_3 CDS 15930162 15930339 15930162 ID=Msa1094360-mRNA-1:cds;Parent=Msa1094360-mRNA-1
chr7_3 CDS 15929714 15929958 15929714 ID=Msa1094360-mRNA-1:cds;Parent=Msa1094360-mRNA-1
chr7_3 CDS 15929212 15929301 15929212 ID=Msa1094360-mRNA-1:cds;Parent=Msa1094360-mRNA-1
chr7_3 CDS 15928271 15928651 15928271 ID=Msa1094360-mRNA-1:cds;Parent=Msa1094360-mRNA-1
Gene Sequence

>Msa1094360

ATGGAGCATCACAGTGAAGGAAGTGTTTCTTCTAAGAGACTTATGGAGCATCACAGTGAAGGAAGTGTTTCTTCTGATACTCATAAGAGGAAGAAACGTCGTTGCAACCGTCACACTGCTGATCAGATCCAAAGGCTTGAAGCGGTGTTTAAGACATGTTCATATCCTGATGAAAAACAAAGGTTGCAGTTAGGCAAGGAATTAGCCATGGATCCTACTAAGATCAAATTTTGGTTTCAGAATAGAAGGACTCAGATGAAGACACAACAAGAAAGAGATGATAACCGTATACTCATAGAAGAGAATGATAAAATAAGATCTGAGAATATAGCTATGAGGCAAGCCCTTAAAAATGTTATTTGCAGCACTTGTGATGAACAAAAGTTGAGAATTGAAAATGCTCGACTCAAAGAAGAGCTTGTTAGAGTATCTAGCATTGCAGCTAGATACACTAGAAAATCACTGCCACACCTTTTACCAGGAAGTTCATCAACATTGCCAAATGTTCCTTACCAACCTGCTGGTCTCTCTAATAAGGAAAAATCACTCATGTTTGGCATTGCTGAAAATGCAATGCAAGAGCTGGTTTTGCTTATGGAAACTAATGAGCCTTTATGGATGAAATCAAACACTGATGGAAGAGATACTCTTAACCTTGAAACCTATGAAACAATGTTCCCTAGGGTTAATAATCAGTTAAAGAATCCCAATATTCGCATCGAAGCTTCTAGAAATTCTGGTGATGTTGTCATGAATGCCTCGACTTTGGTTGAAATGTTTATGGATCCTAACAAGTGGATGGAGCTATTTCCAACTATTGTGACAATGGCAAAGACTATTGAAGTTATATCTTCTCGAACGAAGGATGGTCTAAGTGGTTCTTTGCAATTGATGTATGGAGAGTTGCAAGTGCTTTCACCACTTGTTCCTATTAGAGAATTTTACTTCCTACGTTACTGTAAACAATTTGAGAAAGGATGGGCAATAGTTGATGTTTCGTATGAATTTCCTCATAACAAACATTTTGCTTCGAAATTTCGAGGCCTTCGTCTTCCTTCCGGTTGCTTCATCCAAAACATGCCTAATGGCAAATCCAAGGTTACTTGGATTGAACATGTTGAGGTTGAAGACAGAAACCCAGTTCATATGCTTTATAAAAATGTTATCAATAGTGGAGTTGCATTTGGAGCTGAAAAATGGCTCACTACACTTCAAAGAATGTGTGAAAAGCTTGCTTATCTTATGGATTCAGGCCATTCCGGTCATATCGAAGGAGTGATTTCATCACCTGATGGAAAGAGGACCATGATGAAGCTAACACAAAGGATGGTAACTAATTTCTGTGAAAGTATAAATGCATCAGCTAGTCATAGATGGACCACATTATCAACTTTGAATGAGATTATTGTGAGGAAGAGTCAGCCTAATGGTGAGGTGCTAAGCGCATCTACTACCATTTGGCTACCTCTCCCTCCACAAACTGTGTTCAATTTCTTGAACGATGAAAGAAAAAGATCCCAGTCGAATGTACTTTCCAATGGTAATGATGTTCAAGAGGTTGTTCATATAGCAAATGTTTCGCGCCCAGGTAACTGCATTTCCGTGTTTAAGGGTTTCAACACAAGTAACAACAACATGTTGATACTACAAGAAAGTTGTGTGGACTCATCAGGTTCACTTGTGGTGTCTTGTCCTGTTGATTCATCAATAATGAACGAGGTAGATCCTTCATACATTCAATTACTACCATCAGGTTTCGCAATTACTTCTGATGGAAAGCAAAATGATAATAATATTCAAGGAGGTAATAGTGATAATGGTGATGTTGCATCAACAAGCTCAAACCCAAACATTGGAGGATCATTGTTAACAGTTGCATTTCAAATTATGGTGAGTAGTTTACCATCTAACATGGAGTCTGTTCCAATTGTTAATGGACTTATTGGTAAGACTGTCCAACACATAAAAGCTGCTTTGAATTGTCCTATGTAG
Protein sequence

>Msa1094360

MEHHSEGSVSSKRLMEHHSEGSVSSDTHKRKKRRCNRHTADQIQRLEAVFKTCSYPDEKQRLQLGKELAMDPTKIKFWFQNRRTQMKTQQERDDNRILIEENDKIRSENIAMRQALKNVICSTCDEQKLRIENARLKEELVRVSSIAARYTRKSLPHLLPGSSSTLPNVPYQPAGLSNKEKSLMFGIAENAMQELVLLMETNEPLWMKSNTDGRDTLNLETYETMFPRVNNQLKNPNIRIEASRNSGDVVMNASTLVEMFMDPNKWMELFPTIVTMAKTIEVISSRTKDGLSGSLQLMYGELQVLSPLVPIREFYFLRYCKQFEKGWAIVDVSYEFPHNKHFASKFRGLRLPSGCFIQNMPNGKSKVTWIEHVEVEDRNPVHMLYKNVINSGVAFGAEKWLTTLQRMCEKLAYLMDSGHSGHIEGVISSPDGKRTMMKLTQRMVTNFCESINASASHRWTTLSTLNEIIVRKSQPNGEVLSASTTIWLPLPPQTVFNFLNDERKRSQSNVLSNGNDVQEVVHIANVSRPGNCISVFKGFNTSNNNMLILQESCVDSSGSLVVSCPVDSSIMNEVDPSYIQLLPSGFAITSDGKQNDNNIQGGNSDNGDVASTSSNPNIGGSLLTVAFQIMVSSLPSNMESVPIVNGLIGKTVQHIKAALNCPM*