Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1095390 | XP_024626123.1 | 85.343 | 423 | 45 | 2 | 1 | 423 | 1 | 406 | 0.0 | 717 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1095390 | sp|Q6X7J5|WOX8_ARATH | 52.344 | 128 | 53 | 1 | 1 | 120 | 1 | 128 | 3.70e-39 | 146 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1095390 | U5LKY5 | 85.343 | 423 | 45 | 2 | 1 | 423 | 1 | 406 | 0.0 | 717 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1095390 | TF | HB-WOX |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1095390 | MtrunA17_Chr7g0223471 | 85.343 | 423 | 45 | 2 | 1 | 423 | 1 | 406 | 0.0 | 717 |
| Msa1095390 | MtrunA17_Chr4g0046231 | 51.579 | 380 | 107 | 7 | 66 | 422 | 1 | 326 | 5.37e-102 | 306 |
| Msa1095390 | MtrunA17_Chr2g0283141 | 39.778 | 450 | 199 | 10 | 1 | 422 | 1 | 406 | 9.35e-77 | 245 |
| Msa1095390 | MtrunA17_Chr4g0046241 | 63.694 | 157 | 48 | 1 | 163 | 319 | 1 | 148 | 2.32e-60 | 194 |
| Msa1095390 | MtrunA17_Chr4g0046251 | 65.672 | 67 | 23 | 0 | 356 | 422 | 19 | 85 | 1.04e-24 | 97.1 |
| Msa1095390 | MtrunA17_Chr6g0460691 | 63.333 | 60 | 22 | 0 | 39 | 98 | 24 | 83 | 1.94e-22 | 97.1 |
| Msa1095390 | MtrunA17_Chr7g0254251 | 66.667 | 60 | 20 | 0 | 37 | 96 | 18 | 77 | 2.29e-22 | 96.3 |
| Msa1095390 | MtrunA17_Chr4g0043891 | 45.714 | 70 | 38 | 0 | 42 | 111 | 3 | 72 | 3.83e-17 | 80.9 |
| Msa1095390 | MtrunA17_Chr5g0436661 | 41.250 | 80 | 47 | 0 | 29 | 108 | 15 | 94 | 5.87e-16 | 75.9 |
| Msa1095390 | MtrunA17_Chr8g0392991 | 50.000 | 62 | 31 | 0 | 47 | 108 | 96 | 157 | 7.15e-16 | 78.6 |
| Msa1095390 | MtrunA17_Chr5g0405351 | 48.438 | 64 | 32 | 1 | 47 | 109 | 30 | 93 | 5.42e-15 | 75.5 |
| Msa1095390 | MtrunA17_Chr1g0212511 | 42.857 | 77 | 40 | 1 | 30 | 106 | 72 | 144 | 3.14e-14 | 72.4 |
| Msa1095390 | MtrunA17_Chr4g0031341 | 45.161 | 62 | 34 | 0 | 47 | 108 | 25 | 86 | 1.92e-13 | 70.1 |
| Msa1095390 | MtrunA17_Chr1g0153171 | 46.774 | 62 | 33 | 0 | 47 | 108 | 90 | 151 | 4.12e-13 | 68.6 |
| Msa1095390 | MtrunA17_Chr3g0144021 | 44.444 | 63 | 35 | 0 | 45 | 107 | 80 | 142 | 5.62e-13 | 67.8 |
| Msa1095390 | MtrunA17_Chr7g0238431 | 39.726 | 73 | 44 | 0 | 41 | 113 | 2 | 74 | 2.58e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1095390 | AT5G45980.1 | 52.344 | 128 | 53 | 1 | 1 | 120 | 1 | 128 | 3.77e-40 | 146 |
| Msa1095390 | AT3G03660.1 | 68.519 | 54 | 17 | 0 | 45 | 98 | 31 | 84 | 8.74e-22 | 94.7 |
| Msa1095390 | AT3G03660.2 | 68.519 | 54 | 17 | 0 | 45 | 98 | 31 | 84 | 1.52e-21 | 94.7 |
| Msa1095390 | AT3G03660.4 | 66.102 | 59 | 19 | 1 | 41 | 98 | 26 | 84 | 1.90e-21 | 94.4 |
| Msa1095390 | AT3G03660.3 | 66.102 | 59 | 19 | 1 | 41 | 98 | 26 | 84 | 2.90e-21 | 94.4 |
| Msa1095390 | AT5G17810.3 | 66.667 | 54 | 18 | 0 | 45 | 98 | 19 | 72 | 6.90e-21 | 92.0 |
| Msa1095390 | AT5G17810.1 | 66.667 | 54 | 18 | 0 | 45 | 98 | 19 | 72 | 7.52e-21 | 92.0 |
| Msa1095390 | AT5G17810.2 | 66.667 | 54 | 18 | 0 | 45 | 98 | 19 | 72 | 7.52e-21 | 92.0 |
| Msa1095390 | AT5G05770.1 | 40.000 | 75 | 45 | 0 | 47 | 121 | 29 | 103 | 4.85e-15 | 71.6 |
| Msa1095390 | AT3G18010.1 | 38.384 | 99 | 52 | 2 | 47 | 145 | 76 | 165 | 5.16e-15 | 76.3 |
| Msa1095390 | AT3G11260.1 | 45.312 | 64 | 35 | 0 | 47 | 110 | 24 | 87 | 2.53e-14 | 71.2 |
| Msa1095390 | AT2G17950.1 | 48.438 | 64 | 32 | 1 | 47 | 109 | 38 | 101 | 3.38e-14 | 73.2 |
| Msa1095390 | AT4G35550.1 | 46.032 | 63 | 34 | 0 | 45 | 107 | 97 | 159 | 4.20e-14 | 72.4 |
| Msa1095390 | AT1G46480.2 | 46.774 | 62 | 33 | 0 | 47 | 108 | 90 | 151 | 1.21e-13 | 69.7 |
| Msa1095390 | AT1G20700.2 | 44.444 | 63 | 35 | 0 | 45 | 107 | 31 | 93 | 2.00e-13 | 68.2 |
| Msa1095390 | AT1G20700.1 | 44.444 | 63 | 35 | 0 | 45 | 107 | 93 | 155 | 3.69e-13 | 68.9 |
| Msa1095390 | AT2G33880.2 | 31.210 | 157 | 101 | 2 | 266 | 422 | 229 | 378 | 3.73e-13 | 70.9 |
| Msa1095390 | AT1G20700.3 | 44.444 | 63 | 35 | 0 | 45 | 107 | 93 | 155 | 3.82e-13 | 68.6 |
| Msa1095390 | AT2G33880.1 | 30.573 | 157 | 102 | 2 | 266 | 422 | 229 | 378 | 3.92e-13 | 70.9 |
| Msa1095390 | AT1G46480.1 | 46.774 | 62 | 33 | 0 | 47 | 108 | 90 | 151 | 5.92e-13 | 68.9 |
| Msa1095390 | AT5G59340.1 | 41.935 | 62 | 36 | 0 | 47 | 108 | 14 | 75 | 2.10e-12 | 67.4 |
| Msa1095390 | AT2G28610.1 | 41.176 | 68 | 40 | 0 | 41 | 108 | 2 | 69 | 3.25e-12 | 66.6 |
| Msa1095390 | AT2G01500.1 | 39.241 | 79 | 40 | 1 | 31 | 101 | 37 | 115 | 8.17e-12 | 65.9 |
| Msa1095390 | AT5G46010.1 | 46.154 | 65 | 34 | 1 | 43 | 106 | 50 | 114 | 2.13e-11 | 61.2 |
Find 107 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCATCTTGGCTTTGGTTC+TGG | 0.191744 | 7_3:+18084955 | None:intergenic |
| CAAGACCCACAACTTAATTT+TGG | 0.218741 | 7_3:-18084106 | Msa1095390:CDS |
| CAAGACCCACAACTTAATTT+TGG | 0.218741 | 7_3:-18084202 | Msa1095390:CDS |
| ATGAACTATGGAAGTGTTAA+TGG | 0.219154 | 7_3:-18084394 | Msa1095390:CDS |
| CACCATCCCTGTGTTGAAAA+TGG | 0.220373 | 7_3:+18084900 | None:intergenic |
| GGGTGTGGGTGGTTGTAAAT+TGG | 0.233407 | 7_3:+18084513 | None:intergenic |
| ATGCGAATTTGTTGTGGTTT+TGG | 0.249723 | 7_3:+18084931 | None:intergenic |
| CATAGGTTTAATCACTTATC+TGG | 0.257497 | 7_3:-18084421 | Msa1095390:CDS |
| AAAGGATGCACGAACGTTAA+AGG | 0.277456 | 7_3:+18083498 | None:intergenic |
| AATAAGCATCAACTTGGTTT+TGG | 0.278040 | 7_3:+18084554 | None:intergenic |
| TTATCTGGTTTCATGAACTA+TGG | 0.293987 | 7_3:-18084406 | Msa1095390:CDS |
| CTCAACTCTTCTCTCTTAAC+TGG | 0.309596 | 7_3:-18085842 | Msa1095390:intron |
| AATTAAGTTGTGGGTCTTGC+TGG | 0.313309 | 7_3:+18084110 | None:intergenic |
| AATTAAGTTGTGGGTCTTGC+TGG | 0.313309 | 7_3:+18084206 | None:intergenic |
| TTTGGGTTCCATCTTGGCTT+TGG | 0.347448 | 7_3:+18084949 | None:intergenic |
| TCATCATCGTCATCTTCTTC+TGG | 0.355757 | 7_3:-18084685 | Msa1095390:CDS |
| TTTAACGTTCGTGCATCCTT+TGG | 0.359074 | 7_3:-18083496 | Msa1095390:CDS |
| CGTGAACAATTACAAGAGTT+TGG | 0.359135 | 7_3:-18084847 | Msa1095390:CDS |
| CACGAGCTCATCATGAACTA+TGG | 0.372037 | 7_3:-18084313 | Msa1095390:CDS |
| ATCTTCGTAATTTCCTCCCT+TGG | 0.380246 | 7_3:+18084871 | None:intergenic |
| TACTAAGGACGCCTCATTCA+TGG | 0.386072 | 7_3:-18083533 | Msa1095390:CDS |
| TCCAGTTCTAACCGATGAAT+GGG | 0.405372 | 7_3:-18083440 | Msa1095390:CDS |
| TGTGGTGTTGTCATGGCATT+AGG | 0.415749 | 7_3:+18084442 | None:intergenic |
| ACTGTAATTTCTAACAATAT+CGG | 0.416634 | 7_3:-18084637 | Msa1095390:CDS |
| GGATTCTCCAATGCTAATGA+TGG | 0.428470 | 7_3:-18084616 | Msa1095390:CDS |
| TCAGGATTTGGCGTGGAAGA+TGG | 0.430982 | 7_3:-18083577 | Msa1095390:intron |
| CCCCATTCATCGGTTAGAAC+TGG | 0.431005 | 7_3:+18083439 | None:intergenic |
| GCCTTGAGAATTCCGTTGGT+TGG | 0.439358 | 7_3:+18085865 | None:intergenic |
| TTCGTAATTTCCTCCCTTGG+TGG | 0.441626 | 7_3:+18084874 | None:intergenic |
| GTTGTAAATTGGTTTCAGTC+GGG | 0.445592 | 7_3:+18084524 | None:intergenic |
| CCATGGTGCTACTTATTACC+TGG | 0.446959 | 7_3:-18083395 | Msa1095390:intron |
| AAGGATGCACGAACGTTAAA+GGG | 0.448612 | 7_3:+18083499 | None:intergenic |
| TTAGAAATTACAGTTTCATC+GGG | 0.455420 | 7_3:+18084646 | None:intergenic |
| CTCCAGTTCTAACCGATGAA+TGG | 0.457716 | 7_3:-18083441 | Msa1095390:CDS |
| CGCCTCATTCATGGTTGATG+TGG | 0.462527 | 7_3:-18083524 | Msa1095390:CDS |
| GCAGTTCTCTTTGACTCCTC+TGG | 0.463999 | 7_3:-18083466 | Msa1095390:CDS |
| GCCTCATTCATGGTTGATGT+GGG | 0.464076 | 7_3:-18083523 | Msa1095390:CDS |
| CCTCTTCCTCCGACTACCAT+TGG | 0.468440 | 7_3:-18084037 | Msa1095390:intron |
| CACCATGGTGGAGCGAATCA+AGG | 0.472512 | 7_3:+18083410 | None:intergenic |
| GGTTGTAAATTGGTTTCAGT+CGG | 0.475867 | 7_3:+18084523 | None:intergenic |
| GTTAGAAATTACAGTTTCAT+CGG | 0.477841 | 7_3:+18084645 | None:intergenic |
| TCGTAATTTCCTCCCTTGGT+GGG | 0.478421 | 7_3:+18084875 | None:intergenic |
| CTCCAGAACCAAAGCCAAGA+TGG | 0.487752 | 7_3:-18084957 | Msa1095390:CDS |
| GTGTTTCTCGTTTCTTGTTG+TGG | 0.496273 | 7_3:+18084749 | None:intergenic |
| AATTACAGTTTCATCGGGAG+AGG | 0.500855 | 7_3:+18084651 | None:intergenic |
| TCATTGATATGATTCTCCAC+AGG | 0.502500 | 7_3:+18084475 | None:intergenic |
| CCAATGGTAGTCGGAGGAAG+AGG | 0.504535 | 7_3:+18084037 | None:intergenic |
| ATTCCGTTGGTTGGACGCAT+TGG | 0.507387 | 7_3:+18085874 | None:intergenic |
| CAACACCAAAATTAAGTTGT+GGG | 0.508001 | 7_3:+18084101 | None:intergenic |
| CAACACCAAAATTAAGTTGT+GGG | 0.508001 | 7_3:+18084197 | None:intergenic |
| GACTCTTCTCTTGATCATAT+CGG | 0.515755 | 7_3:+18084260 | None:intergenic |
| AAATATTGTTTAGGTGGAGA+TGG | 0.518896 | 7_3:-18084991 | Msa1095390:intron |
| CACCATCCCATCATTAGCAT+TGG | 0.520729 | 7_3:+18084609 | None:intergenic |
| ATCATATCGGTCATCGATTG+TGG | 0.526068 | 7_3:+18084273 | None:intergenic |
| TTGAAACCAGTAAAAGACAT+TGG | 0.529718 | 7_3:+18084810 | None:intergenic |
| TGAGGCCTTGAGAATTCCGT+TGG | 0.536803 | 7_3:+18085861 | None:intergenic |
| AGGTAAGGGTTGAACCATTG+AGG | 0.538283 | 7_3:+18084366 | None:intergenic |
| TACATGTGAATCGGAGGAAG+AGG | 0.539564 | 7_3:+18084133 | None:intergenic |
| AGAAGATGACGATGATGAGT+TGG | 0.545042 | 7_3:+18084690 | None:intergenic |
| GAAGATGACGATGATGAGTT+GGG | 0.545800 | 7_3:+18084691 | None:intergenic |
| TCGAGAATGCGAATTTGTTG+TGG | 0.549826 | 7_3:+18084925 | None:intergenic |
| GCTAGGCCAATGTTTGTTCG+AGG | 0.550853 | 7_3:+18085913 | None:intergenic |
| TGTTAATGGAAGCTCCTCAA+TGG | 0.556181 | 7_3:-18084380 | Msa1095390:CDS |
| TTACAAGAGTTTGGTCAAGT+TGG | 0.556243 | 7_3:-18084838 | Msa1095390:CDS |
| TCTTGCTGGTACATGTGAAT+CGG | 0.558464 | 7_3:+18084124 | None:intergenic |
| CATTGATATGATTCTCCACA+GGG | 0.560599 | 7_3:+18084476 | None:intergenic |
| ACCATGGTGGAGCGAATCAA+GGG | 0.565239 | 7_3:+18083411 | None:intergenic |
| CCCCACATCAACCATGAATG+AGG | 0.565657 | 7_3:+18083522 | None:intergenic |
| GTAGACTTCTTGAACATGCT+AGG | 0.571860 | 7_3:+18085896 | None:intergenic |
| TGGCTTCCTCGAACAAACAT+TGG | 0.573120 | 7_3:-18085919 | Msa1095390:CDS |
| CGAGAAACACAACAAAACTC+TGG | 0.574956 | 7_3:-18084736 | Msa1095390:CDS |
| GCAACACCAAAATTAAGTTG+TGG | 0.576573 | 7_3:+18084100 | None:intergenic |
| GCAACACCAAAATTAAGTTG+TGG | 0.576573 | 7_3:+18084196 | None:intergenic |
| TTTGTTTGCTTCTAGACTTG+CGG | 0.582777 | 7_3:+18084785 | None:intergenic |
| AAACCTATGTGGTGTTGTCA+TGG | 0.586615 | 7_3:+18084435 | None:intergenic |
| AAGGGTAGCACCCCATTCAT+CGG | 0.587182 | 7_3:+18083429 | None:intergenic |
| TTGTAAATTGGTTTCAGTCG+GGG | 0.588784 | 7_3:+18084525 | None:intergenic |
| GATTCTCCAATGCTAATGAT+GGG | 0.589822 | 7_3:-18084615 | Msa1095390:CDS |
| AAAATGTACTGTGATTACTA+AGG | 0.592453 | 7_3:-18083548 | Msa1095390:CDS |
| CTCCAATGCTAATGATGGGA+TGG | 0.594670 | 7_3:-18084611 | Msa1095390:CDS |
| TTGGTTCACCGAGACTGCGG+GGG | 0.602191 | 7_3:+18084573 | None:intergenic |
| TCCAACCAACGGAATTCTCA+AGG | 0.602756 | 7_3:-18085866 | Msa1095390:CDS |
| GAGAACTGCTCGATCTCCAA+AGG | 0.604797 | 7_3:+18083480 | None:intergenic |
| CTACCAATGCGTCCAACCAA+CGG | 0.608541 | 7_3:-18085877 | Msa1095390:CDS |
| GATAAGTGATTAAACCTATG+TGG | 0.608582 | 7_3:+18084424 | None:intergenic |
| TGTGAAAATAAGCATCAACT+TGG | 0.611249 | 7_3:+18084548 | None:intergenic |
| TGATCAAGAGAAGAGTCAAG+AGG | 0.611568 | 7_3:-18084254 | Msa1095390:CDS |
| ACCCTTGATTCGCTCCACCA+TGG | 0.616014 | 7_3:-18083412 | Msa1095390:CDS |
| TGCTGGTACATGTGAATCGG+AGG | 0.618843 | 7_3:+18084127 | None:intergenic |
| TTTGGTTCACCGAGACTGCG+GGG | 0.623412 | 7_3:+18084572 | None:intergenic |
| GATGGTGAACCCACCAAGGG+AGG | 0.632998 | 7_3:-18084884 | Msa1095390:CDS |
| CAGTTAAGAGAGAAGAGTTG+AGG | 0.637407 | 7_3:+18085843 | None:intergenic |
| ATGCCATGACAACACCACAT+AGG | 0.641572 | 7_3:-18084438 | Msa1095390:CDS |
| ACAGGTGCACCAATGGTAGT+CGG | 0.643930 | 7_3:+18084028 | None:intergenic |
| ATTTGGCGTGGAAGATGGAG+CGG | 0.645210 | 7_3:-18083572 | Msa1095390:CDS |
| CAGGGATGGTGAACCCACCA+AGG | 0.647061 | 7_3:-18084888 | Msa1095390:CDS |
| GGTAATAAGTAGCACCATGG+TGG | 0.650858 | 7_3:+18083398 | None:intergenic |
| CAATGCTAATGATGGGATGG+TGG | 0.652306 | 7_3:-18084608 | Msa1095390:CDS |
| CCTCATTCATGGTTGATGTG+GGG | 0.657797 | 7_3:-18083522 | Msa1095390:CDS |
| ATGAGCTCGTGATTAACTAG+AGG | 0.662842 | 7_3:+18084325 | None:intergenic |
| AGGGATGGTGAACCCACCAA+GGG | 0.665906 | 7_3:-18084887 | Msa1095390:CDS |
| CCAGTTCTAACCGATGAATG+GGG | 0.682383 | 7_3:-18083439 | Msa1095390:CDS |
| GGTTAGAACTGGAGTACCAG+AGG | 0.692890 | 7_3:+18083450 | None:intergenic |
| GCGTTTGTCAGGATTTGGCG+TGG | 0.696978 | 7_3:-18083584 | Msa1095390:intron |
| CCAGGTAATAAGTAGCACCA+TGG | 0.700447 | 7_3:+18083395 | None:intergenic |
| GGTGCACCAATGGTAGTCGG+AGG | 0.701339 | 7_3:+18084031 | None:intergenic |
| GATGACGATGATGAGTTGGG+TGG | 0.712576 | 7_3:+18084694 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATAATAATAATAAGTAGA+GGG | + | chr7_3:18082396-18082415 | None:intergenic | 10.0% |
| !! | ATAATAATAATAATAAGTAG+AGG | + | chr7_3:18082397-18082416 | None:intergenic | 10.0% |
| !!! | TAATATTTCTTTAAAACAAT+TGG | + | chr7_3:18082925-18082944 | None:intergenic | 10.0% |
| !! | TATATGACTATTTATTTAAT+TGG | - | chr7_3:18084964-18084983 | Msa1095390:CDS | 10.0% |
| !! | TAAAAAACATATTTACTTAT+TGG | + | chr7_3:18085196-18085215 | None:intergenic | 10.0% |
| !! | TATAGAAATATCATAATACT+CGG | - | chr7_3:18083109-18083128 | Msa1095390:intron | 15.0% |
| !!! | ACTTTTAACAAATATTGTTT+AGG | - | chr7_3:18083199-18083218 | Msa1095390:intron | 15.0% |
| !!! | TATTTTGTTTTTTCTTTTTC+AGG | - | chr7_3:18085912-18085931 | Msa1095390:CDS | 15.0% |
| !! | CAAAATAACTTAAATTGATG+TGG | - | chr7_3:18082514-18082533 | Msa1095390:intron | 20.0% |
| !!! | AATTTTAAATCGATTCGTTT+AGG | + | chr7_3:18082619-18082638 | None:intergenic | 20.0% |
| !! | TTAAAATATAATTGCTCGAT+CGG | + | chr7_3:18082728-18082747 | None:intergenic | 20.0% |
| !!! | TTGTTTTATTGTATACACTA+CGG | - | chr7_3:18082863-18082882 | Msa1095390:intron | 20.0% |
| !! | AAACTACAATATGAACTATA+TGG | + | chr7_3:18082955-18082974 | None:intergenic | 20.0% |
| !! | TTTAACAAATATTGTTTAGG+TGG | - | chr7_3:18083202-18083221 | Msa1095390:intron | 20.0% |
| !! | ACTGTAATTTCTAACAATAT+CGG | - | chr7_3:18083562-18083581 | Msa1095390:CDS | 20.0% |
| !!! | AACTTAGTTTGAATTTTAGT+TGG | - | chr7_3:18084314-18084333 | Msa1095390:CDS | 20.0% |
| !! | TAAACAAAGCAAATGTTATA+AGG | + | chr7_3:18084841-18084860 | None:intergenic | 20.0% |
| !! | GTTCAATATTAATTGTATGT+TGG | + | chr7_3:18085060-18085079 | None:intergenic | 20.0% |
| !! | TATTAGAAAACATATCTTGA+GGG | + | chr7_3:18085623-18085642 | None:intergenic | 20.0% |
| !! | TATAACATGTCTTTATTCAA+TGG | - | chr7_3:18085655-18085674 | Msa1095390:intron | 20.0% |
| !!! | TTCCAAACACAATTTTTTTT+TGG | - | chr7_3:18085817-18085836 | Msa1095390:intron | 20.0% |
| !! | AAACTAATTTAAGAAAATGC+AGG | + | chr7_3:18085850-18085869 | None:intergenic | 20.0% |
| !! | TGAGTTTATAGACATTGATT+TGG | + | chr7_3:18082484-18082503 | None:intergenic | 25.0% |
| !!! | TTAGGTTTTTTTTCCATGTT+GGG | + | chr7_3:18082601-18082620 | None:intergenic | 25.0% |
| !!! | TTTAGGTTTTTTTTCCATGT+TGG | + | chr7_3:18082602-18082621 | None:intergenic | 25.0% |
| ! | AAATTTGATCTATACTCGTT+TGG | - | chr7_3:18082663-18082682 | Msa1095390:intron | 25.0% |
| ! | AATTTGATCTATACTCGTTT+GGG | - | chr7_3:18082664-18082683 | Msa1095390:intron | 25.0% |
| ! | TTAGAAATTACAGTTTCATC+GGG | + | chr7_3:18083556-18083575 | None:intergenic | 25.0% |
| ! | GTTAGAAATTACAGTTTCAT+CGG | + | chr7_3:18083557-18083576 | None:intergenic | 25.0% |
| ! | ATGAACTATGGAAGTAAAAA+TGG | - | chr7_3:18083898-18083917 | Msa1095390:intron | 25.0% |
| !!! | TTTTTGTTGTTTTATCCATC+TGG | + | chr7_3:18084415-18084434 | None:intergenic | 25.0% |
| !! | TACCTGGAACTTTAAATTTT+GGG | + | chr7_3:18084491-18084510 | None:intergenic | 25.0% |
| !! | ATACCTGGAACTTTAAATTT+TGG | + | chr7_3:18084492-18084511 | None:intergenic | 25.0% |
| ! | TAATAAAACGAAATCATACC+TGG | + | chr7_3:18084507-18084526 | None:intergenic | 25.0% |
| !!! | TTTCGTTTTATTATATCCCA+CGG | - | chr7_3:18084514-18084533 | Msa1095390:CDS | 25.0% |
| ! | AAAATGTACTGTGATTACTA+AGG | - | chr7_3:18084651-18084670 | Msa1095390:CDS | 25.0% |
| ! | ACCAGTGTATATGATTATAA+GGG | - | chr7_3:18084873-18084892 | Msa1095390:CDS | 25.0% |
| !! | TCACATGACAATAATTTTAC+CGG | + | chr7_3:18084912-18084931 | None:intergenic | 25.0% |
| !! | AAAGAAGTGTGTTAAAAAGT+AGG | - | chr7_3:18085147-18085166 | Msa1095390:intron | 25.0% |
| ! | ATTTATAACAATGCTTGCAA+TGG | + | chr7_3:18085240-18085259 | None:intergenic | 25.0% |
| !!! | TTTTTAGGATTTCACAGTTT+TGG | - | chr7_3:18085559-18085578 | Msa1095390:intron | 25.0% |
| ! | TAATGAATAATGAGTGCTTT+AGG | - | chr7_3:18085594-18085613 | Msa1095390:intron | 25.0% |
| ! | AATGAATAATGAGTGCTTTA+GGG | - | chr7_3:18085595-18085614 | Msa1095390:intron | 25.0% |
| ! | GTATTAGAAAACATATCTTG+AGG | + | chr7_3:18085624-18085643 | None:intergenic | 25.0% |
| ! | GACATGTTATAATTGTATAG+CGG | + | chr7_3:18085646-18085665 | None:intergenic | 25.0% |
| ! | TGCCAAAAAAAAATTGTGTT+TGG | + | chr7_3:18085822-18085841 | None:intergenic | 25.0% |
| !!! | TGATGTGGTTTTTTCAATGT+CGG | - | chr7_3:18082529-18082548 | Msa1095390:intron | 30.0% |
| !!! | TAGGTTTTTTTTCCATGTTG+GGG | + | chr7_3:18082600-18082619 | None:intergenic | 30.0% |
| AAATATTGTTTAGGTGGAGA+TGG | - | chr7_3:18083208-18083227 | Msa1095390:intron | 30.0% | |
| TTGAAACCAGTAAAAGACAT+TGG | + | chr7_3:18083392-18083411 | None:intergenic | 30.0% | |
| ! | AATAAGCATCAACTTGGTTT+TGG | + | chr7_3:18083648-18083667 | None:intergenic | 30.0% |
| TGTGAAAATAAGCATCAACT+TGG | + | chr7_3:18083654-18083673 | None:intergenic | 30.0% | |
| GATAAGTGATTAAACCTATG+TGG | + | chr7_3:18083778-18083797 | None:intergenic | 30.0% | |
| CATAGGTTTAATCACTTATC+TGG | - | chr7_3:18083778-18083797 | Msa1095390:intron | 30.0% | |
| ! | TTATCTGGTTTCATGAACTA+TGG | - | chr7_3:18083793-18083812 | Msa1095390:intron | 30.0% |
| !! | ATGAACTATGGAAGTGTTAA+TGG | - | chr7_3:18083805-18083824 | Msa1095390:intron | 30.0% |
| ! | TCAACATTTTGTTGAGGTAA+GGG | + | chr7_3:18083850-18083869 | None:intergenic | 30.0% |
| ! | ATCAACATTTTGTTGAGGTA+AGG | + | chr7_3:18083851-18083870 | None:intergenic | 30.0% |
| ! | CAACACCAAAATTAAGTTGT+GGG | + | chr7_3:18084005-18084024 | None:intergenic | 30.0% |
| ! | CAACACCAAAATTAAGTTGT+GGG | + | chr7_3:18084005-18084024 | None:intergenic | 30.0% |
| !! | TGACGTTGATGATCAATAAT+GGG | + | chr7_3:18084210-18084229 | None:intergenic | 30.0% |
| !! | TTGACGTTGATGATCAATAA+TGG | + | chr7_3:18084211-18084230 | None:intergenic | 30.0% |
| ATTATTGATCATCAACGTCA+AGG | - | chr7_3:18084210-18084229 | Msa1095390:CDS | 30.0% | |
| AGAAGGTAAGTAAAGTGTAA+TGG | + | chr7_3:18084351-18084370 | None:intergenic | 30.0% | |
| CACCAGTGTATATGATTATA+AGG | - | chr7_3:18084872-18084891 | Msa1095390:CDS | 30.0% | |
| TCCCTTATAATCATATACAC+TGG | + | chr7_3:18084877-18084896 | None:intergenic | 30.0% | |
| ! | AAAAGTCACGGGTTAAATTT+CGG | - | chr7_3:18084935-18084954 | Msa1095390:CDS | 30.0% |
| ! | GTAAAACAGTTTGACGATTT+TGG | - | chr7_3:18085121-18085140 | Msa1095390:intron | 30.0% |
| ATAGTCGCTTACCATAAAAA+TGG | + | chr7_3:18085452-18085471 | None:intergenic | 30.0% | |
| TAATCATATCACAACTCAAG+TGG | - | chr7_3:18085527-18085546 | Msa1095390:intron | 30.0% | |
| AATCATATCACAACTCAAGT+GGG | - | chr7_3:18085528-18085547 | Msa1095390:intron | 30.0% | |
| ! | AAGTGGGTGTCTATATTTTT+AGG | - | chr7_3:18085544-18085563 | Msa1095390:intron | 30.0% |
| !!! | GATGTGGTTTTTTCAATGTC+GGG | - | chr7_3:18082530-18082549 | Msa1095390:intron | 35.0% |
| !!! | ATGTGGTTTTTTCAATGTCG+GGG | - | chr7_3:18082531-18082550 | Msa1095390:intron | 35.0% |
| ! | ACACTACGGATTATAAACCA+AGG | - | chr7_3:18082877-18082896 | Msa1095390:intron | 35.0% |
| TTATCTTCATCTGTTTGCCT+TGG | + | chr7_3:18082897-18082916 | None:intergenic | 35.0% | |
| !!! | TGCGAATTTGTTGTGGTTTT+GGG | + | chr7_3:18083270-18083289 | None:intergenic | 35.0% |
| !!! | ATGCGAATTTGTTGTGGTTT+TGG | + | chr7_3:18083271-18083290 | None:intergenic | 35.0% |
| CGTGAACAATTACAAGAGTT+TGG | - | chr7_3:18083352-18083371 | Msa1095390:intron | 35.0% | |
| TTACAAGAGTTTGGTCAAGT+TGG | - | chr7_3:18083361-18083380 | Msa1095390:intron | 35.0% | |
| TTTGTTTGCTTCTAGACTTG+CGG | + | chr7_3:18083417-18083436 | None:intergenic | 35.0% | |
| GATTCTCCAATGCTAATGAT+GGG | - | chr7_3:18083584-18083603 | Msa1095390:intron | 35.0% | |
| ! | TTGTAAATTGGTTTCAGTCG+GGG | + | chr7_3:18083677-18083696 | None:intergenic | 35.0% |
| ! | GTTGTAAATTGGTTTCAGTC+GGG | + | chr7_3:18083678-18083697 | None:intergenic | 35.0% |
| ! | GGTTGTAAATTGGTTTCAGT+CGG | + | chr7_3:18083679-18083698 | None:intergenic | 35.0% |
| CATTGATATGATTCTCCACA+GGG | + | chr7_3:18083726-18083745 | None:intergenic | 35.0% | |
| TCATTGATATGATTCTCCAC+AGG | + | chr7_3:18083727-18083746 | None:intergenic | 35.0% | |
| ! | GGTACATCAACATTTTGTTG+AGG | + | chr7_3:18083856-18083875 | None:intergenic | 35.0% |
| GACTCTTCTCTTGATCATAT+CGG | + | chr7_3:18083942-18083961 | None:intergenic | 35.0% | |
| ! | CAAGACCCACAACTTAATTT+TGG | - | chr7_3:18083997-18084016 | Msa1095390:intron | 35.0% |
| ! | GCAACACCAAAATTAAGTTG+TGG | + | chr7_3:18084006-18084025 | None:intergenic | 35.0% |
| ! | CAAGACCCACAACTTAATTT+TGG | - | chr7_3:18083997-18084016 | Msa1095390:intron | 35.0% |
| ! | GCAACACCAAAATTAAGTTG+TGG | + | chr7_3:18084006-18084025 | None:intergenic | 35.0% |
| ! | TGATGATCAATAATGGGGAA+TGG | + | chr7_3:18084204-18084223 | None:intergenic | 35.0% |
| !! | GACGTTGATGATCAATAATG+GGG | + | chr7_3:18084209-18084228 | None:intergenic | 35.0% |
| ! | CACCCAAAATTTAAAGTTCC+AGG | - | chr7_3:18084486-18084505 | Msa1095390:CDS | 35.0% |
| ! | TTTTCTTTTGTGCGTTTGTC+AGG | - | chr7_3:18084604-18084623 | Msa1095390:CDS | 35.0% |
| TATAAGGAAAAATACGCACC+AGG | + | chr7_3:18084825-18084844 | None:intergenic | 35.0% | |
| GTCATGTGACTAAAAAGTCA+CGG | - | chr7_3:18084923-18084942 | Msa1095390:CDS | 35.0% | |
| TCATGTGACTAAAAAGTCAC+GGG | - | chr7_3:18084924-18084943 | Msa1095390:CDS | 35.0% | |
| TATCTCTCTTGTTAGTGTAG+TGG | + | chr7_3:18085093-18085112 | None:intergenic | 35.0% | |
| ATGCTTGCAATGGAATAAGA+GGG | + | chr7_3:18085230-18085249 | None:intergenic | 35.0% | |
| AATGCTTGCAATGGAATAAG+AGG | + | chr7_3:18085231-18085250 | None:intergenic | 35.0% | |
| AACAATGACTTTCCCATAGT+CGG | + | chr7_3:18085372-18085391 | None:intergenic | 35.0% | |
| CATTGTTCACACATAACACA+TGG | - | chr7_3:18085385-18085404 | Msa1095390:intron | 35.0% | |
| TTCACACATAACACATGGAT+TGG | - | chr7_3:18085390-18085409 | Msa1095390:intron | 35.0% | |
| TCACACATAACACATGGATT+GGG | - | chr7_3:18085391-18085410 | Msa1095390:intron | 35.0% | |
| !! | TGCACATGCATCCATTTTTA+TGG | - | chr7_3:18085438-18085457 | Msa1095390:intron | 35.0% |
| AGATCGTTGTATTGAGTAGT+TGG | + | chr7_3:18085478-18085497 | None:intergenic | 35.0% | |
| CATTGCGATGTCTAAAAACA+CGG | + | chr7_3:18085507-18085526 | None:intergenic | 35.0% | |
| TAGGATCAGTTAAGTCAAAC+TGG | + | chr7_3:18085739-18085758 | None:intergenic | 35.0% | |
| GCTACTACTATACTATCAAG+AGG | - | chr7_3:18085788-18085807 | Msa1095390:intron | 35.0% | |
| GTAGACTTCTTGAACATGCT+AGG | + | chr7_3:18082306-18082325 | None:intergenic | 40.0% | |
| CAGTTAAGAGAGAAGAGTTG+AGG | + | chr7_3:18082359-18082378 | None:intergenic | 40.0% | |
| CTCAACTCTTCTCTCTTAAC+TGG | - | chr7_3:18082357-18082376 | Msa1095390:intron | 40.0% | |
| !!! | TGTGGTTTTTTCAATGTCGG+GGG | - | chr7_3:18082532-18082551 | Msa1095390:intron | 40.0% |
| !! | TCGAGAATGCGAATTTGTTG+TGG | + | chr7_3:18083277-18083296 | None:intergenic | 40.0% |
| !! | TCGAAGCCATTTTCAACACA+GGG | - | chr7_3:18083293-18083312 | Msa1095390:intron | 40.0% |
| ATCTTCGTAATTTCCTCCCT+TGG | + | chr7_3:18083331-18083350 | None:intergenic | 40.0% | |
| ! | GTGATGCCAATGTCTTTTAC+TGG | - | chr7_3:18083383-18083402 | Msa1095390:intron | 40.0% |
| GTGTTTCTCGTTTCTTGTTG+TGG | + | chr7_3:18083453-18083472 | None:intergenic | 40.0% | |
| CGAGAAACACAACAAAACTC+TGG | - | chr7_3:18083463-18083482 | Msa1095390:CDS | 40.0% | |
| GAAGATGACGATGATGAGTT+GGG | + | chr7_3:18083511-18083530 | None:intergenic | 40.0% | |
| AGAAGATGACGATGATGAGT+TGG | + | chr7_3:18083512-18083531 | None:intergenic | 40.0% | |
| TCATCATCGTCATCTTCTTC+TGG | - | chr7_3:18083514-18083533 | Msa1095390:CDS | 40.0% | |
| AATTACAGTTTCATCGGGAG+AGG | + | chr7_3:18083551-18083570 | None:intergenic | 40.0% | |
| GGATTCTCCAATGCTAATGA+TGG | - | chr7_3:18083583-18083602 | Msa1095390:intron | 40.0% | |
| ! | AAAGAGAAAAATGGGGGTGT+GGG | + | chr7_3:18083703-18083722 | None:intergenic | 40.0% |
| ACAGGGAAAGAGAAAAATGG+GGG | + | chr7_3:18083709-18083728 | None:intergenic | 40.0% | |
| CACAGGGAAAGAGAAAAATG+GGG | + | chr7_3:18083710-18083729 | None:intergenic | 40.0% | |
| CCACAGGGAAAGAGAAAAAT+GGG | + | chr7_3:18083711-18083730 | None:intergenic | 40.0% | |
| TCCACAGGGAAAGAGAAAAA+TGG | + | chr7_3:18083712-18083731 | None:intergenic | 40.0% | |
| !! | AAACCTATGTGGTGTTGTCA+TGG | + | chr7_3:18083767-18083786 | None:intergenic | 40.0% |
| TGTTAATGGAAGCTCCTCAA+TGG | - | chr7_3:18083819-18083838 | Msa1095390:intron | 40.0% | |
| ATGAGCTCGTGATTAACTAG+AGG | + | chr7_3:18083877-18083896 | None:intergenic | 40.0% | |
| ! | ATCATATCGGTCATCGATTG+TGG | + | chr7_3:18083929-18083948 | None:intergenic | 40.0% |
| TGATCAAGAGAAGAGTCAAG+AGG | - | chr7_3:18083945-18083964 | Msa1095390:intron | 40.0% | |
| ! | AATTAAGTTGTGGGTCTTGC+TGG | + | chr7_3:18083996-18084015 | None:intergenic | 40.0% |
| TCTTGCTGGTACATGTGAAT+CGG | + | chr7_3:18083982-18084001 | None:intergenic | 40.0% | |
| ! | AATTAAGTTGTGGGTCTTGC+TGG | + | chr7_3:18083996-18084015 | None:intergenic | 40.0% |
| !! | TCCATCTGGTTCTCAAAAAG+CGG | + | chr7_3:18084401-18084420 | None:intergenic | 40.0% |
| TTTGTGCGTTTGTCAGGATT+TGG | - | chr7_3:18084610-18084629 | Msa1095390:CDS | 40.0% | |
| AAGGATGCACGAACGTTAAA+GGG | + | chr7_3:18084703-18084722 | None:intergenic | 40.0% | |
| AAAGGATGCACGAACGTTAA+AGG | + | chr7_3:18084704-18084723 | None:intergenic | 40.0% | |
| TTTAACGTTCGTGCATCCTT+TGG | - | chr7_3:18084703-18084722 | Msa1095390:CDS | 40.0% | |
| ! | TCCAGTTCTAACCGATGAAT+GGG | - | chr7_3:18084759-18084778 | Msa1095390:CDS | 40.0% |
| ! | ATAATTTTACCGGTGCGTCA+AGG | + | chr7_3:18084902-18084921 | None:intergenic | 40.0% |
| ! | TCACGGGTTAAATTTCGGAA+AGG | - | chr7_3:18084940-18084959 | Msa1095390:CDS | 40.0% |
| TAAAACAAGACGTGCAAAGC+AGG | - | chr7_3:18085027-18085046 | Msa1095390:intron | 40.0% | |
| TACTTATTGGAGCAGTGATG+TGG | + | chr7_3:18085183-18085202 | None:intergenic | 40.0% | |
| GTAGCTAGGTATGTATAAGG+AGG | + | chr7_3:18085350-18085369 | None:intergenic | 40.0% | |
| TCGGTAGCTAGGTATGTATA+AGG | + | chr7_3:18085353-18085372 | None:intergenic | 40.0% | |
| ! | CACACATAACACATGGATTG+GGG | - | chr7_3:18085392-18085411 | Msa1095390:intron | 40.0% |
| !! | ACACATAACACATGGATTGG+GGG | - | chr7_3:18085393-18085412 | Msa1095390:intron | 40.0% |
| ATCCAAATGTGCAAATGTCG+TGG | + | chr7_3:18085768-18085787 | None:intergenic | 40.0% | |
| TGGCTTCCTCGAACAAACAT+TGG | - | chr7_3:18082280-18082299 | Msa1095390:intron | 45.0% | |
| TCCAACCAACGGAATTCTCA+AGG | - | chr7_3:18082333-18082352 | Msa1095390:intron | 45.0% | |
| TCGAGTTTATGTCCCCAACA+TGG | - | chr7_3:18082585-18082604 | Msa1095390:intron | 45.0% | |
| !! | TTCCATCTTGGCTTTGGTTC+TGG | + | chr7_3:18083247-18083266 | None:intergenic | 45.0% |
| ! | TTTGGGTTCCATCTTGGCTT+TGG | + | chr7_3:18083253-18083272 | None:intergenic | 45.0% |
| !!! | TGTGGTTTTGGGTTCCATCT+TGG | + | chr7_3:18083259-18083278 | None:intergenic | 45.0% |
| !! | CTCGAAGCCATTTTCAACAC+AGG | - | chr7_3:18083292-18083311 | Msa1095390:intron | 45.0% |
| !! | AGCCATTTTCAACACAGGGA+TGG | - | chr7_3:18083297-18083316 | Msa1095390:intron | 45.0% |
| CACCATCCCTGTGTTGAAAA+TGG | + | chr7_3:18083302-18083321 | None:intergenic | 45.0% | |
| TCGTAATTTCCTCCCTTGGT+GGG | + | chr7_3:18083327-18083346 | None:intergenic | 45.0% | |
| TTCGTAATTTCCTCCCTTGG+TGG | + | chr7_3:18083328-18083347 | None:intergenic | 45.0% | |
| ! | CTCCAATGCTAATGATGGGA+TGG | - | chr7_3:18083588-18083607 | Msa1095390:intron | 45.0% |
| CACCATCCCATCATTAGCAT+TGG | + | chr7_3:18083593-18083612 | None:intergenic | 45.0% | |
| ! | CAATGCTAATGATGGGATGG+TGG | - | chr7_3:18083591-18083610 | Msa1095390:intron | 45.0% |
| GAAAGAGAAAAATGGGGGTG+TGG | + | chr7_3:18083704-18083723 | None:intergenic | 45.0% | |
| !! | CCCATTTTTCTCTTTCCCTG+TGG | - | chr7_3:18083708-18083727 | Msa1095390:intron | 45.0% |
| !! | TGTGGTGTTGTCATGGCATT+AGG | + | chr7_3:18083760-18083779 | None:intergenic | 45.0% |
| ATGCCATGACAACACCACAT+AGG | - | chr7_3:18083761-18083780 | Msa1095390:intron | 45.0% | |
| AGGTAAGGGTTGAACCATTG+AGG | + | chr7_3:18083836-18083855 | None:intergenic | 45.0% | |
| CACGAGCTCATCATGAACTA+TGG | - | chr7_3:18083886-18083905 | Msa1095390:intron | 45.0% | |
| TACATGTGAATCGGAGGAAG+AGG | + | chr7_3:18084069-18084088 | None:intergenic | 45.0% | |
| ! | TCGCGTTTGGCTTAATCAGA+AGG | + | chr7_3:18084368-18084387 | None:intergenic | 45.0% |
| TTCATCTCTCGCATGCAACT+TGG | + | chr7_3:18084584-18084603 | None:intergenic | 45.0% | |
| TACTAAGGACGCCTCATTCA+TGG | - | chr7_3:18084666-18084685 | Msa1095390:CDS | 45.0% | |
| ! | GCCTCATTCATGGTTGATGT+GGG | - | chr7_3:18084676-18084695 | Msa1095390:CDS | 45.0% |
| ! | CCTCATTCATGGTTGATGTG+GGG | - | chr7_3:18084677-18084696 | Msa1095390:CDS | 45.0% |
| ! | CTCCAGTTCTAACCGATGAA+TGG | - | chr7_3:18084758-18084777 | Msa1095390:CDS | 45.0% |
| ! | CCAGTTCTAACCGATGAATG+GGG | - | chr7_3:18084760-18084779 | Msa1095390:CDS | 45.0% |
| GGTAATAAGTAGCACCATGG+TGG | + | chr7_3:18084804-18084823 | None:intergenic | 45.0% | |
| CCAGGTAATAAGTAGCACCA+TGG | + | chr7_3:18084807-18084826 | None:intergenic | 45.0% | |
| !! | CCATGGTGCTACTTATTACC+TGG | - | chr7_3:18084804-18084823 | Msa1095390:CDS | 45.0% |
| ! | ACATACCTAGCTACCGACTA+TGG | - | chr7_3:18085356-18085375 | Msa1095390:intron | 45.0% |
| ! | CATACCTAGCTACCGACTAT+GGG | - | chr7_3:18085357-18085376 | Msa1095390:intron | 45.0% |
| !! | CACATAACACATGGATTGGG+GGG | - | chr7_3:18085394-18085413 | Msa1095390:intron | 45.0% |
| TTGGGGGGATTTCTCATAGT+TGG | - | chr7_3:18085409-18085428 | Msa1095390:intron | 45.0% | |
| AATAACCACGCTTTAGCACC+TGG | - | chr7_3:18085684-18085703 | Msa1095390:intron | 45.0% | |
| AAATGTGCAAATGTCGTGGC+AGG | + | chr7_3:18085764-18085783 | None:intergenic | 45.0% | |
| TGCCACGACATTTGCACATT+TGG | - | chr7_3:18085763-18085782 | Msa1095390:intron | 45.0% | |
| !!! | ATATATTTGTAATTTTTTAA+GGG | + | chr7_3:18084463-18084482 | None:intergenic | 5.0% |
| !!! | TATATATTTGTAATTTTTTA+AGG | + | chr7_3:18084464-18084483 | None:intergenic | 5.0% |
| !!! | TACATATATTAATTTAATTT+TGG | + | chr7_3:18085320-18085339 | None:intergenic | 5.0% |
| GCTAGGCCAATGTTTGTTCG+AGG | + | chr7_3:18082289-18082308 | None:intergenic | 50.0% | |
| CTACCAATGCGTCCAACCAA+CGG | - | chr7_3:18082322-18082341 | Msa1095390:intron | 50.0% | |
| ! | ATTCCGTTGGTTGGACGCAT+TGG | + | chr7_3:18082328-18082347 | None:intergenic | 50.0% |
| GCCTTGAGAATTCCGTTGGT+TGG | + | chr7_3:18082337-18082356 | None:intergenic | 50.0% | |
| TGAGGCCTTGAGAATTCCGT+TGG | + | chr7_3:18082341-18082360 | None:intergenic | 50.0% | |
| CTCCAGAACCAAAGCCAAGA+TGG | - | chr7_3:18083242-18083261 | Msa1095390:intron | 50.0% | |
| ! | GATGACGATGATGAGTTGGG+TGG | + | chr7_3:18083508-18083527 | None:intergenic | 50.0% |
| TTCTAATTCCCCCGCAGTCT+CGG | - | chr7_3:18083618-18083637 | Msa1095390:intron | 50.0% | |
| !!! | TTTTGGTTCACCGAGACTGC+GGG | + | chr7_3:18083631-18083650 | None:intergenic | 50.0% |
| !!! | GTTTTGGTTCACCGAGACTG+CGG | + | chr7_3:18083632-18083651 | None:intergenic | 50.0% |
| GGGTGTGGGTGGTTGTAAAT+TGG | + | chr7_3:18083689-18083708 | None:intergenic | 50.0% | |
| TGCTGGTACATGTGAATCGG+AGG | + | chr7_3:18084075-18084094 | None:intergenic | 50.0% | |
| ACAGGTGCACCAATGGTAGT+CGG | + | chr7_3:18084174-18084193 | None:intergenic | 50.0% | |
| AACAGCAACAGGTGCACCAA+TGG | + | chr7_3:18084181-18084200 | None:intergenic | 50.0% | |
| ATGGGGAATGGAACAGCAAC+AGG | + | chr7_3:18084192-18084211 | None:intergenic | 50.0% | |
| !! | CGGCTTGGTAATTTCGCGTT+TGG | + | chr7_3:18084381-18084400 | None:intergenic | 50.0% |
| ! | CTGGTTCTCAAAAAGCGGCT+TGG | + | chr7_3:18084396-18084415 | None:intergenic | 50.0% |
| !!! | GCCGCTTTTTGAGAACCAGA+TGG | - | chr7_3:18084397-18084416 | Msa1095390:CDS | 50.0% |
| TCAGGATTTGGCGTGGAAGA+TGG | - | chr7_3:18084622-18084641 | Msa1095390:CDS | 50.0% | |
| ATTTGGCGTGGAAGATGGAG+CGG | - | chr7_3:18084627-18084646 | Msa1095390:CDS | 50.0% | |
| ! | CGCCTCATTCATGGTTGATG+TGG | - | chr7_3:18084675-18084694 | Msa1095390:CDS | 50.0% |
| CCCCACATCAACCATGAATG+AGG | + | chr7_3:18084680-18084699 | None:intergenic | 50.0% | |
| GAGAACTGCTCGATCTCCAA+AGG | + | chr7_3:18084722-18084741 | None:intergenic | 50.0% | |
| GCAGTTCTCTTTGACTCCTC+TGG | - | chr7_3:18084733-18084752 | Msa1095390:CDS | 50.0% | |
| ! | GGTTAGAACTGGAGTACCAG+AGG | + | chr7_3:18084752-18084771 | None:intergenic | 50.0% |
| ! | CCCCATTCATCGGTTAGAAC+TGG | + | chr7_3:18084763-18084782 | None:intergenic | 50.0% |
| AAGGGTAGCACCCCATTCAT+CGG | + | chr7_3:18084773-18084792 | None:intergenic | 50.0% | |
| ! | ACCATGGTGGAGCGAATCAA+GGG | + | chr7_3:18084791-18084810 | None:intergenic | 50.0% |
| CTTTCCCATAGTCGGTAGCT+AGG | + | chr7_3:18085364-18085383 | None:intergenic | 50.0% | |
| TTGTACCAGGTGCTAAAGCG+TGG | + | chr7_3:18085692-18085711 | None:intergenic | 50.0% | |
| AGGGATGGTGAACCCACCAA+GGG | - | chr7_3:18083312-18083331 | Msa1095390:intron | 55.0% | |
| ! | TTTGGTTCACCGAGACTGCG+GGG | + | chr7_3:18083630-18083649 | None:intergenic | 55.0% |
| ! | GAGAAAAATGGGGGTGTGGG+TGG | + | chr7_3:18083700-18083719 | None:intergenic | 55.0% |
| CCAATGGTAGTCGGAGGAAG+AGG | + | chr7_3:18084165-18084184 | None:intergenic | 55.0% | |
| CCTCTTCCTCCGACTACCAT+TGG | - | chr7_3:18084162-18084181 | Msa1095390:CDS | 55.0% | |
| GCGTTTGTCAGGATTTGGCG+TGG | - | chr7_3:18084615-18084634 | Msa1095390:CDS | 55.0% | |
| ! | ACCCTTGATTCGCTCCACCA+TGG | - | chr7_3:18084787-18084806 | Msa1095390:CDS | 55.0% |
| ! | CACCATGGTGGAGCGAATCA+AGG | + | chr7_3:18084792-18084811 | None:intergenic | 55.0% |
| TAAGGGAAGCCTTGACGCAC+CGG | - | chr7_3:18084890-18084909 | Msa1095390:CDS | 55.0% | |
| !! | TGGTGCTTGCTGTTGCACCA+GGG | + | chr7_3:18085719-18085738 | None:intergenic | 55.0% |
| CAGGGATGGTGAACCCACCA+AGG | - | chr7_3:18083311-18083330 | Msa1095390:intron | 60.0% | |
| GATGGTGAACCCACCAAGGG+AGG | - | chr7_3:18083315-18083334 | Msa1095390:intron | 60.0% | |
| TTGGTTCACCGAGACTGCGG+GGG | + | chr7_3:18083629-18083648 | None:intergenic | 60.0% | |
| GGTGCACCAATGGTAGTCGG+AGG | + | chr7_3:18084171-18084190 | None:intergenic | 60.0% | |
| !! | GGTGCTTGCTGTTGCACCAG+GGG | + | chr7_3:18085718-18085737 | None:intergenic | 60.0% |
| !! | CTGGTGCTTGCTGTTGCACC+AGG | + | chr7_3:18085720-18085739 | None:intergenic | 60.0% |
| GCAAATGTCGTGGCAGGCGT+AGG | + | chr7_3:18085758-18085777 | None:intergenic | 60.0% | |
| TGCGCATTGCACGCGTCCGT+GGG | + | chr7_3:18084533-18084552 | None:intergenic | 65.0% | |
| TTGCGCATTGCACGCGTCCG+TGG | + | chr7_3:18084534-18084553 | None:intergenic | 65.0% | |
| GCACCTGGTACAACTGCCCC+TGG | - | chr7_3:18085699-18085718 | Msa1095390:intron | 65.0% | |
| GCACCAGGGGCAGTTGTACC+AGG | + | chr7_3:18085705-18085724 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 18082279 | 18085942 | 18082279 | ID=Msa1095390;Name=Msa1095390 |
| chr7_3 | mRNA | 18082279 | 18085942 | 18082279 | ID=Msa1095390-mRNA-1;Parent=Msa1095390;Name=Msa1095390-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|0.75|1|1|4|0|423 |
| chr7_3 | exon | 18085843 | 18085942 | 18085843 | ID=Msa1095390-mRNA-1:exon:3959;Parent=Msa1095390-mRNA-1 |
| chr7_3 | exon | 18084038 | 18085000 | 18084038 | ID=Msa1095390-mRNA-1:exon:3958;Parent=Msa1095390-mRNA-1 |
| chr7_3 | exon | 18083396 | 18083595 | 18083396 | ID=Msa1095390-mRNA-1:exon:3957;Parent=Msa1095390-mRNA-1 |
| chr7_3 | exon | 18082279 | 18082287 | 18082279 | ID=Msa1095390-mRNA-1:exon:3956;Parent=Msa1095390-mRNA-1 |
| chr7_3 | CDS | 18085843 | 18085942 | 18085843 | ID=Msa1095390-mRNA-1:cds;Parent=Msa1095390-mRNA-1 |
| chr7_3 | CDS | 18084038 | 18085000 | 18084038 | ID=Msa1095390-mRNA-1:cds;Parent=Msa1095390-mRNA-1 |
| chr7_3 | CDS | 18083396 | 18083595 | 18083396 | ID=Msa1095390-mRNA-1:cds;Parent=Msa1095390-mRNA-1 |
| chr7_3 | CDS | 18082279 | 18082287 | 18082279 | ID=Msa1095390-mRNA-1:cds;Parent=Msa1095390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
