AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1098150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1098150 MtrunA17_Chr7g0220111 90.037 271 5 1 1 271 1 249 1.17e-178 491
Msa1098150 MtrunA17_Chr6g0455511 81.250 272 28 4 1 271 1 250 5.36e-158 439
Msa1098150 MtrunA17_Chr3g0122251 59.124 274 79 6 1 270 1 245 1.18e-101 296
Msa1098150 MtrunA17_Chr5g0420091 56.667 240 78 4 1 239 1 215 7.13e-88 260
Msa1098150 MtrunA17_Chr4g0061671 66.471 170 56 1 1 170 1 169 4.57e-76 229
Msa1098150 MtrunA17_Chr8g0351051 46.520 273 122 8 1 271 1 251 8.68e-68 210
Msa1098150 MtrunA17_Chr4g0061691 59.172 169 68 1 1 168 1 169 2.38e-59 188
Msa1098150 MtrunA17_Chr6g0474371 51.099 182 86 2 1 179 1 182 2.74e-54 174
Msa1098150 MtrunA17_Chr8g0377551 50.476 210 71 7 63 270 1 179 4.90e-54 173
Msa1098150 MtrunA17_Chr8g0366231 52.976 168 78 1 1 167 1 168 5.15e-54 175
Msa1098150 MtrunA17_Chr7g0220121 48.045 179 90 2 1 178 1 177 2.13e-49 163
Msa1098150 MtrunA17_Chr1g0204111 49.419 172 84 2 1 170 17 187 3.44e-49 163
Msa1098150 MtrunA17_Chr5g0420081 49.444 180 90 1 1 179 1 180 5.97e-49 162
Msa1098150 MtrunA17_Chr3g0077501 43.860 228 115 8 1 222 1 221 1.12e-47 158
Msa1098150 MtrunA17_Chr4g0057151 50.000 168 82 2 1 167 1 167 5.41e-47 155
Msa1098150 MtrunA17_Chr8g0380021 46.784 171 89 2 1 170 17 186 1.18e-44 151
Msa1098150 MtrunA17_Chr2g0284911 46.199 171 90 2 1 170 16 185 2.12e-43 148
Msa1098150 MtrunA17_Chr8g0351031 47.458 177 80 4 1 170 1 171 2.66e-43 147
Msa1098150 MtrunA17_Chr3g0097101 47.368 171 88 2 1 170 16 185 2.71e-43 147
Msa1098150 MtrunA17_Chr7g0246431 49.112 169 84 2 1 168 1 168 4.25e-43 146
Msa1098150 MtrunA17_Chr2g0279821 44.706 170 93 1 1 170 1 169 5.02e-41 141
Msa1098150 MtrunA17_Chr8g0351041 46.707 167 76 4 1 160 1 161 5.46e-40 136
Msa1098150 MtrunA17_Chr5g0411691 43.713 167 92 2 1 167 1 165 1.09e-38 135
Msa1098150 MtrunA17_Chr4g0049541 42.353 170 97 1 1 170 1 169 2.66e-37 131
Msa1098150 MtrunA17_Chr4g0018421 43.787 169 93 2 1 167 1 169 3.46e-37 130
Msa1098150 MtrunA17_Chr8g0377561 96.721 61 2 0 1 61 1 61 7.27e-36 124
Msa1098150 MtrunA17_Chr1g0164791 40.805 174 96 3 1 168 1 173 2.10e-35 126
Msa1098150 MtrunA17_Chr5g0427401 43.195 169 90 3 1 167 1 165 1.39e-33 122
Msa1098150 MtrunA17_Chr3g0125241 44.828 145 75 2 1 144 26 166 3.36e-33 120
Msa1098150 MtrunA17_Chr7g0246381 80.882 68 13 0 1 68 1 68 4.82e-33 115
Msa1098150 MtrunA17_Chr5g0412271 39.785 186 96 4 1 181 1 175 2.78e-32 118
Msa1098150 MtrunA17_Chr4g0020221 46.988 166 80 4 1 160 1 164 3.84e-32 119
Msa1098150 MtrunA17_Chr5g0412461 41.860 172 90 3 1 167 1 167 1.55e-31 116
Msa1098150 MtrunA17_Chr2g0308251 66.667 75 25 0 1 75 1 75 2.18e-29 106
Msa1098150 MtrunA17_Chr3g0142191 42.405 158 85 3 1 157 1 153 3.45e-29 110
Msa1098150 MtrunA17_Chr1g0159661 39.645 169 93 3 1 168 1 161 7.25e-29 108
Msa1098150 MtrunA17_Chr5g0404951 41.558 154 75 5 1 146 1 147 1.45e-27 106
Msa1098150 MtrunA17_Chr4g0049901 34.389 221 127 6 1 216 27 234 3.77e-27 105
Msa1098150 MtrunA17_Chr1g0173161 78.333 60 13 0 1 60 1 60 3.04e-26 98.6
Msa1098150 MtrunA17_Chr5g0427921 65.000 60 21 0 1 60 1 60 6.11e-24 91.7
Msa1098150 MtrunA17_Chr4g0044071 64.912 57 20 0 1 57 1 57 4.96e-21 85.9
Msa1098150 MtrunA17_Chr5g0425191 66.667 57 19 0 1 57 1 57 1.54e-20 84.0
Msa1098150 MtrunA17_Chr3g0134451 57.143 70 30 0 1 70 1 70 2.01e-20 89.0
Msa1098150 MtrunA17_Chr2g0308271 39.516 124 74 1 57 179 28 151 3.99e-19 83.2
Msa1098150 MtrunA17_Chr1g0166611 80.000 45 9 0 16 60 20 64 1.24e-18 80.1
Msa1098150 MtrunA17_Chr2g0292791 52.174 69 32 1 2 70 9 76 3.85e-17 78.6
Msa1098150 MtrunA17_Chr2g0325971 49.275 69 34 1 2 70 9 76 1.15e-16 77.0
Msa1098150 MtrunA17_Chr1g0208561 50.704 71 32 2 2 70 7 76 1.33e-16 76.6
Msa1098150 MtrunA17_Chr3g0089141 50.704 71 32 2 2 70 7 76 1.57e-16 76.6
Msa1098150 MtrunA17_Chr1g0208581 50.704 71 32 2 2 70 7 76 1.65e-16 76.6
Msa1098150 MtrunA17_Chr3g0099421 52.174 69 32 1 2 70 34 101 3.19e-16 76.3
Msa1098150 MtrunA17_Chr8g0379021 36.364 143 70 6 2 127 12 150 3.35e-16 74.7
Msa1098150 MtrunA17_Chr3g0099411 49.275 69 34 1 2 70 9 76 1.17e-15 73.9
Msa1098150 MtrunA17_Chr8g0355091 49.275 69 34 1 2 70 9 76 1.49e-15 73.9
Msa1098150 MtrunA17_Chr5g0419601 51.429 70 33 1 1 70 8 76 1.71e-15 73.9
Msa1098150 MtrunA17_Chr1g0206701 49.275 69 34 1 2 70 9 76 1.93e-15 73.9
Msa1098150 MtrunA17_Chr1g0206721 49.275 69 34 1 2 70 9 76 2.09e-15 73.6
Msa1098150 MtrunA17_Chr2g0333981 34.043 141 78 4 1 127 11 150 2.70e-15 72.0
Msa1098150 MtrunA17_Chr8g0357771 31.609 174 102 4 1 167 1 164 4.34e-15 71.6
Msa1098150 MtrunA17_Chr1g0149391 50.725 69 33 1 2 70 9 76 4.83e-15 72.8
Msa1098150 MtrunA17_Chr2g0317451 50.725 69 33 1 2 70 9 76 4.88e-15 72.8
Msa1098150 MtrunA17_Chr2g0317481 50.725 69 33 1 2 70 9 76 5.23e-15 72.4
Msa1098150 MtrunA17_Chr1g0187361 47.826 69 35 1 2 70 9 76 6.64e-15 72.4
Msa1098150 MtrunA17_Chr8g0376821 52.632 57 27 0 1 57 1 57 9.84e-15 70.5
Msa1098150 MtrunA17_Chr5g0417661 54.717 53 24 0 1 53 56 108 1.66e-14 68.6
Msa1098150 MtrunA17_Chr1g0188671 47.826 69 35 1 2 70 47 114 2.71e-14 71.2
Msa1098150 MtrunA17_Chr1g0169761 52.632 57 27 0 1 57 1 57 2.99e-14 69.3
Msa1098150 MtrunA17_Chr1g0206991 46.377 69 36 1 2 70 9 76 3.87e-14 68.9
Msa1098150 MtrunA17_Chr4g0052061 47.541 61 32 0 1 61 1 61 4.22e-14 68.6
Msa1098150 MtrunA17_Chr5g0422941 49.275 69 34 1 2 70 9 76 4.42e-14 70.1
Msa1098150 MtrunA17_Chr1g0175611 50.877 57 28 0 1 57 1 57 7.24e-14 68.2
Msa1098150 MtrunA17_Chr5g0422421 49.275 69 34 1 2 70 9 76 7.83e-14 69.3
Msa1098150 MtrunA17_Chr1g0180591 49.123 57 29 0 1 57 1 57 1.13e-13 67.8
Msa1098150 MtrunA17_Chr4g0074101 49.123 57 29 0 1 57 1 57 1.73e-13 67.4
Msa1098150 MtrunA17_Chr1g0175601 50.877 57 28 0 1 57 1 57 2.76e-13 66.6
Msa1098150 MtrunA17_Chr2g0300441 46.479 71 35 2 2 70 7 76 4.88e-13 67.0
Msa1098150 MtrunA17_Chr4g0018951 36.232 138 77 6 16 147 26 158 5.52e-13 65.5
Msa1098150 MtrunA17_Chr2g0300421 51.724 58 26 1 2 57 7 64 8.03e-13 65.1
Msa1098150 MtrunA17_Chr4g0060841 50.943 53 26 0 1 53 1 53 9.55e-13 67.4
Msa1098150 MtrunA17_Chr3g0089151 43.478 69 38 1 2 70 9 76 1.19e-12 63.5
Msa1098150 MtrunA17_Chr4g0052081 45.763 59 32 0 1 59 1 59 1.66e-12 64.3
Msa1098150 MtrunA17_Chr3g0119901 41.429 70 40 1 1 70 8 76 2.62e-12 64.3
Msa1098150 MtrunA17_Chr5g0427961 33.645 107 71 0 61 167 4 110 4.21e-12 63.2
Msa1098150 MtrunA17_Chr8g0356071 44.262 61 34 0 1 61 1 61 6.07e-12 62.4
Msa1098150 MtrunA17_Chr3g0085241 41.429 70 40 1 1 70 40 108 7.18e-12 63.9
Msa1098150 MtrunA17_Chr3g0111841 51.852 54 26 0 8 61 2 55 7.39e-11 57.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1098150 AT3G02310.1 67.636 275 60 7 1 271 1 250 1.30e-125 357
Msa1098150 AT5G15800.1 68.116 276 58 6 1 271 1 251 3.45e-118 339
Msa1098150 AT5G15800.2 66.549 284 60 7 1 271 1 262 6.47e-117 336
Msa1098150 AT3G02310.2 83.708 178 28 1 1 177 1 178 3.34e-104 301
Msa1098150 AT1G24260.1 57.401 277 77 6 1 270 1 243 6.27e-97 285
Msa1098150 AT1G24260.2 57.194 278 77 6 1 270 1 244 7.00e-97 285
Msa1098150 AT1G24260.3 55.036 278 69 6 1 270 1 230 2.15e-89 265
Msa1098150 AT2G03710.1 51.103 272 118 4 1 271 1 258 3.21e-85 255
Msa1098150 AT2G03710.2 51.103 272 117 5 1 271 1 257 2.09e-83 251
Msa1098150 AT2G03710.3 66.667 168 55 1 1 167 1 168 4.60e-76 229
Msa1098150 AT2G45650.1 46.739 276 118 7 1 271 1 252 2.42e-68 212
Msa1098150 AT1G69120.2 53.846 169 77 1 1 168 1 169 9.13e-57 182
Msa1098150 AT1G69120.1 53.846 169 77 1 1 168 1 169 5.41e-56 181
Msa1098150 AT1G26310.1 54.971 171 74 1 1 168 1 171 4.00e-55 178
Msa1098150 AT5G60910.1 53.571 168 77 1 1 167 1 168 1.68e-53 174
Msa1098150 AT3G61120.1 51.136 176 84 2 1 176 1 174 8.30e-52 169
Msa1098150 AT4G09960.6 44.231 208 110 5 1 205 2 206 8.87e-50 164
Msa1098150 AT4G09960.1 44.231 208 110 5 1 205 1 205 1.03e-49 164
Msa1098150 AT4G09960.5 44.231 208 110 5 1 205 11 215 1.68e-49 164
Msa1098150 AT4G09960.3 44.231 208 110 5 1 205 27 231 5.09e-49 163
Msa1098150 AT2G45660.1 50.000 172 82 3 1 170 1 170 1.13e-46 155
Msa1098150 AT4G09960.2 52.778 144 64 3 1 142 1 142 2.34e-46 155
Msa1098150 AT4G09960.4 49.367 158 76 3 1 156 96 251 3.16e-46 158
Msa1098150 AT3G30260.1 51.948 154 69 2 1 151 1 152 4.27e-46 155
Msa1098150 AT2G45660.2 50.633 158 74 3 1 156 1 156 9.84e-45 149
Msa1098150 AT3G58780.1 47.093 172 87 3 1 170 16 185 1.92e-44 150
Msa1098150 AT3G58780.5 47.093 172 87 3 1 170 22 191 2.05e-44 151
Msa1098150 AT2G42830.1 49.375 160 75 4 1 157 16 172 7.49e-44 149
Msa1098150 AT4G11880.2 51.282 156 76 0 1 156 1 156 1.44e-43 146
Msa1098150 AT4G11880.3 51.282 156 76 0 1 156 1 156 1.44e-43 146
Msa1098150 AT4G18960.1 46.784 171 87 3 2 170 18 186 3.78e-43 147
Msa1098150 AT2G42830.2 48.734 158 77 3 1 156 16 171 3.95e-43 147
Msa1098150 AT4G22950.2 47.904 167 86 1 1 167 1 166 2.17e-42 143
Msa1098150 AT4G22950.3 42.640 197 107 2 1 197 1 191 3.25e-42 144
Msa1098150 AT4G22950.1 42.640 197 107 2 1 197 1 191 3.25e-42 144
Msa1098150 AT4G11880.4 53.425 146 68 0 1 146 1 146 4.00e-42 144
Msa1098150 AT4G11880.1 53.425 146 68 0 1 146 1 146 4.00e-42 144
Msa1098150 AT3G58780.2 45.930 172 82 3 1 170 16 178 4.92e-42 144
Msa1098150 AT3G58780.4 50.327 153 72 3 1 151 16 166 1.14e-41 144
Msa1098150 AT3G57230.1 46.584 161 84 2 1 161 1 159 8.62e-41 141
Msa1098150 AT3G57230.4 46.584 161 84 2 1 161 1 159 8.62e-41 141
Msa1098150 AT4G37940.1 43.529 170 95 1 1 170 1 169 1.33e-40 140
Msa1098150 AT3G58780.3 41.327 196 88 3 1 170 16 210 2.95e-40 140
Msa1098150 AT5G62165.3 44.944 178 92 3 1 177 1 173 1.55e-39 137
Msa1098150 AT5G62165.1 44.944 178 92 3 1 177 1 173 1.55e-39 137
Msa1098150 AT5G62165.2 44.944 178 92 3 1 177 1 173 1.55e-39 137
Msa1098150 AT3G57230.2 48.252 143 73 1 1 143 1 142 5.36e-39 133
Msa1098150 AT4G37940.4 42.697 178 97 2 1 178 1 173 4.38e-38 133
Msa1098150 AT2G14210.1 44.311 167 93 0 1 167 1 167 9.79e-38 133
Msa1098150 AT2G14210.2 44.311 167 93 0 1 167 1 167 1.33e-37 132
Msa1098150 AT5G62165.17 46.497 157 82 2 1 156 1 156 1.66e-37 130
Msa1098150 AT5G62165.12 46.497 157 82 2 1 156 1 156 1.66e-37 130
Msa1098150 AT5G62165.11 46.497 157 82 2 1 156 1 156 1.66e-37 130
Msa1098150 AT2G22630.1 41.176 170 99 1 1 170 1 169 9.78e-37 130
Msa1098150 AT2G22630.2 41.176 170 99 1 1 170 1 169 9.78e-37 130
Msa1098150 AT4G37940.3 47.183 142 74 1 1 142 1 141 9.81e-37 129
Msa1098150 AT5G23260.2 42.857 168 93 2 1 167 1 166 2.78e-36 130
Msa1098150 AT5G23260.4 42.857 168 93 2 1 167 17 182 4.53e-36 130
Msa1098150 AT5G51870.1 43.195 169 93 2 1 167 1 168 6.98e-36 127
Msa1098150 AT5G62165.6 46.259 147 77 2 1 146 1 146 1.62e-35 125
Msa1098150 AT5G62165.9 46.259 147 77 2 1 146 1 146 1.62e-35 125
Msa1098150 AT5G62165.7 46.259 147 77 2 1 146 1 146 1.62e-35 125
Msa1098150 AT5G62165.8 46.259 147 77 2 1 146 1 146 1.62e-35 125
Msa1098150 AT5G62165.13 46.259 147 77 2 1 146 1 146 1.62e-35 125
Msa1098150 AT5G51870.4 43.195 169 93 2 1 167 1 168 1.73e-35 127
Msa1098150 AT5G51870.3 43.195 169 93 2 1 167 11 178 1.85e-35 127
Msa1098150 AT5G62165.10 45.223 157 84 2 1 156 1 156 2.28e-35 125
Msa1098150 AT5G62165.4 45.223 157 84 2 1 156 1 156 2.28e-35 125
Msa1098150 AT5G13790.2 49.045 157 76 3 1 157 1 153 4.05e-35 127
Msa1098150 AT5G13790.1 48.408 157 74 2 1 157 1 150 1.13e-34 126
Msa1098150 AT5G65050.3 41.011 178 98 2 1 178 1 171 1.91e-34 123
Msa1098150 AT5G51860.1 41.040 173 99 2 1 171 1 172 3.01e-34 123
Msa1098150 AT5G51860.2 41.243 177 98 3 1 172 1 176 3.03e-34 123
Msa1098150 AT5G65050.5 39.888 178 89 2 1 178 1 160 3.98e-34 122
Msa1098150 AT3G57390.3 44.000 175 89 2 1 167 1 174 4.24e-34 123
Msa1098150 AT5G65050.2 40.659 182 101 2 1 182 1 175 5.19e-34 122
Msa1098150 AT2G22540.3 39.881 168 99 2 1 167 1 167 8.08e-34 123
Msa1098150 AT2G22540.1 39.881 168 99 2 1 167 1 167 8.08e-34 123
Msa1098150 AT3G57390.1 44.000 175 89 2 1 167 1 174 9.54e-34 123
Msa1098150 AT5G10140.4 41.860 172 89 3 1 168 1 165 1.15e-33 121
Msa1098150 AT5G65060.1 39.888 178 100 3 1 178 1 171 2.11e-33 120
Msa1098150 AT1G71692.1 41.143 175 95 1 1 167 1 175 2.73e-33 121
Msa1098150 AT5G51870.2 45.205 146 77 2 1 144 1 145 3.10e-33 119
Msa1098150 AT5G23260.1 42.262 168 89 3 1 167 17 177 4.64e-33 122
Msa1098150 AT5G20240.1 40.828 169 91 3 1 168 1 161 5.79e-33 120
Msa1098150 AT5G51870.5 44.595 148 79 2 1 146 24 170 1.18e-32 119
Msa1098150 AT5G65060.3 41.071 168 92 3 1 168 1 161 1.19e-32 119
Msa1098150 AT5G65060.2 38.764 178 91 3 1 178 1 160 1.61e-32 118
Msa1098150 AT5G10140.2 44.898 147 74 2 1 147 1 140 1.69e-32 117
Msa1098150 AT5G10140.1 44.898 147 74 2 1 147 1 140 1.77e-32 118
Msa1098150 AT5G10140.3 44.898 147 74 2 1 147 1 140 2.01e-32 118
Msa1098150 AT5G65050.1 39.779 181 98 3 1 177 1 174 5.82e-32 116
Msa1098150 AT5G20240.2 45.714 140 71 2 1 139 1 136 7.80e-32 115
Msa1098150 AT5G23260.3 42.857 147 81 2 1 146 1 145 1.23e-31 117
Msa1098150 AT5G65070.1 42.353 170 87 3 1 168 1 161 1.47e-30 113
Msa1098150 AT5G62165.14 70.833 72 20 1 1 72 1 71 6.23e-30 108
Msa1098150 AT4G24540.1 41.520 171 92 3 1 167 1 167 1.02e-29 112
Msa1098150 AT5G65080.3 41.401 157 83 3 1 156 8 156 5.89e-29 109
Msa1098150 AT2G22540.2 36.905 168 99 2 1 167 1 162 1.26e-28 109
Msa1098150 AT3G54340.1 40.127 157 89 2 1 156 1 153 1.51e-27 106
Msa1098150 AT5G65070.2 37.436 195 92 4 1 168 1 192 3.31e-27 105
Msa1098150 AT1G31140.2 42.308 156 73 3 1 146 1 149 2.33e-26 103
Msa1098150 AT1G31140.1 40.816 147 86 1 1 146 1 147 2.42e-26 102
Msa1098150 AT5G65070.4 42.282 149 75 3 1 147 1 140 3.71e-25 97.8
Msa1098150 AT1G77080.11 38.690 168 96 2 1 168 1 161 3.84e-25 98.6
Msa1098150 AT5G65080.2 39.355 155 86 2 1 155 8 154 3.97e-25 99.4
Msa1098150 AT1G77080.4 37.430 179 105 2 1 179 1 172 4.05e-25 99.4
Msa1098150 AT1G77080.5 38.690 168 96 2 1 168 1 161 6.42e-25 98.2
Msa1098150 AT5G65070.5 36.612 183 86 4 1 156 1 180 5.98e-24 96.7
Msa1098150 AT5G65070.3 36.634 202 85 5 1 168 1 193 6.65e-24 97.1
Msa1098150 AT1G77080.8 33.498 203 107 3 1 179 1 199 1.74e-22 92.8
Msa1098150 AT1G77080.2 35.754 179 104 3 1 179 1 168 5.41e-21 88.2
Msa1098150 AT1G77980.1 54.054 74 34 0 1 74 1 74 1.68e-20 89.7
Msa1098150 AT1G22130.1 47.778 90 38 1 1 90 1 81 2.25e-20 89.4
Msa1098150 AT1G77080.12 36.538 156 88 3 1 156 1 145 2.17e-18 80.1
Msa1098150 AT1G69120.3 41.121 107 62 1 63 168 1 107 2.60e-18 81.3
Msa1098150 AT1G77950.3 52.857 70 33 0 1 70 1 70 7.27e-18 81.3
Msa1098150 AT1G77950.2 52.857 70 33 0 1 70 1 70 7.27e-18 81.3
Msa1098150 AT1G77950.1 52.857 70 33 0 1 70 1 70 7.27e-18 81.3
Msa1098150 AT1G77950.4 52.857 70 33 0 1 70 1 70 7.27e-18 81.3
Msa1098150 AT4G37435.1 59.649 57 23 0 1 57 1 57 1.78e-16 75.9
Msa1098150 AT1G01530.1 31.606 193 117 5 1 186 6 190 6.12e-16 75.9
Msa1098150 AT2G03060.3 37.143 105 57 2 1 104 1 97 2.04e-15 75.9
Msa1098150 AT2G03060.7 37.143 105 57 2 1 104 1 97 2.04e-15 75.9
Msa1098150 AT2G03060.1 37.143 105 57 2 1 104 1 97 2.04e-15 75.9
Msa1098150 AT2G03060.2 37.143 105 57 2 1 104 1 97 2.41e-15 75.5
Msa1098150 AT5G60910.2 39.623 106 63 1 63 167 1 106 5.99e-15 71.6
Msa1098150 AT1G65360.1 43.421 76 42 1 1 76 6 80 6.55e-15 72.4
Msa1098150 AT1G18750.4 52.632 57 27 0 1 57 1 57 2.21e-14 72.8
Msa1098150 AT1G18750.1 52.632 57 27 0 1 57 1 57 2.57e-14 72.4
Msa1098150 AT1G18750.3 52.632 57 27 0 1 57 1 57 3.17e-14 72.4
Msa1098150 AT4G36590.1 53.333 60 28 0 2 61 7 66 9.96e-14 69.7
Msa1098150 AT5G60440.1 46.377 69 36 1 2 70 7 74 1.51e-13 69.7
Msa1098150 AT1G69540.1 30.769 156 86 5 1 156 1 134 2.54e-13 69.3
Msa1098150 AT1G69540.2 30.769 156 86 5 1 156 1 134 3.75e-13 68.9
Msa1098150 AT1G72350.1 46.377 69 34 1 2 70 43 108 4.84e-13 67.4
Msa1098150 AT2G24840.1 45.714 70 37 1 1 70 62 130 8.38e-13 67.0
Msa1098150 AT3G66656.1 47.368 57 30 0 1 57 1 57 1.21e-12 65.1
Msa1098150 AT3G04100.1 43.836 73 40 1 2 74 14 85 1.26e-12 65.9
Msa1098150 AT2G34440.1 45.614 57 31 0 1 57 1 57 1.93e-12 64.7
Msa1098150 AT1G29962.1 50.000 60 30 0 2 61 8 67 1.51e-11 62.4
Msa1098150 AT1G47760.1 45.614 57 31 0 1 57 1 57 2.51e-11 61.6

Find 42 sgRNAs with CRISPR-Local

Find 214 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCTTGCAGTTCTGATTAT+AGG 0.195661 7_3:-24674239 Msa1098150:intron
TGATTGCCGGTAGTGATTTC+TGG 0.210695 7_3:+24674991 None:intergenic
AATAGCTACCTCGAGTTCTT+TGG 0.302335 7_3:+24677291 None:intergenic
ATTAGCTGATCTTCAAAATA+AGG 0.323444 7_3:-24675863 Msa1098150:intron
CAGCACCATAACTGCACTTC+TGG 0.351179 7_3:+24677332 None:intergenic
TCAAGATCTTTAGAACTTAG+TGG 0.370725 7_3:+24676779 None:intergenic
TGAGCAGCTTGAACGGCAAT+TGG 0.374852 7_3:-24676759 Msa1098150:CDS
GCAATCCTACATTGCAGATT+GGG 0.382564 7_3:-24674889 Msa1098150:intron
CAAGTGAATGGATTTGTTCC+TGG 0.418508 7_3:-24674165 Msa1098150:CDS
GAAATCACTACCGGCAATCA+TGG 0.422655 7_3:-24674988 Msa1098150:CDS
TCAGAGCTTCTTCCAGCAGC+TGG 0.423930 7_3:-24674915 Msa1098150:CDS
ACATTTGCAAAGAGAAGAAA+TGG 0.428741 7_3:-24679153 Msa1098150:CDS
GCATGCTCAAAACTCTTGAT+AGG 0.431018 7_3:-24677357 Msa1098150:CDS
TGCAATCCTACATTGCAGAT+TGG 0.436020 7_3:-24674890 Msa1098150:CDS
GAGGAAGAGTTGAGTTGAAG+AGG 0.453499 7_3:-24679203 Msa1098150:CDS
ATATTGCATGCTTTGATCAC+CGG 0.459468 7_3:+24674961 None:intergenic
GGTGATCAAAGCATGCAATA+TGG 0.460751 7_3:-24674959 Msa1098150:CDS
GTTTCAGCTTCAAGTATTCA+CGG 0.476057 7_3:+24676958 None:intergenic
AGGTACCAGAAGTGCAGTTA+TGG 0.477506 7_3:-24677337 Msa1098150:CDS
TTCTGTTCTTTGTGATGCTG+AGG 0.481866 7_3:-24679106 Msa1098150:CDS
TAGGATTGCAATCCAGCTGC+TGG 0.491957 7_3:+24674903 None:intergenic
CAAGCTCAACAACAAGTGAA+TGG 0.495301 7_3:-24674177 Msa1098150:CDS
AAACAGATCCTTGTCAATCA+AGG 0.503683 7_3:-24675738 Msa1098150:intron
TATTACCCAATCTGCAATGT+AGG 0.507401 7_3:+24674884 None:intergenic
CTCAATTATAGCATCCATCC+AGG 0.520557 7_3:+24674147 None:intergenic
CTTATCATCTTCTCTACTCG+TGG 0.542095 7_3:-24679078 Msa1098150:CDS
CGGAATGCAATTTAAAACAA+TGG 0.546473 7_3:-24675535 Msa1098150:intron
GCTACCTCGAGTTCTTTGGC+AGG 0.552441 7_3:+24677295 None:intergenic
TACCGGCAATCATGGGAAGC+CGG 0.557302 7_3:-24674980 Msa1098150:CDS
AAATCACTACCGGCAATCAT+GGG 0.563137 7_3:-24674987 Msa1098150:CDS
AAGATCTTGAGCAGCTTGAA+CGG 0.572971 7_3:-24676766 Msa1098150:CDS
TTTGCAGACACAATTCATGC+TGG 0.573767 7_3:-24675890 Msa1098150:intron
TCAATTCCAGAAATCACTAC+CGG 0.578564 7_3:-24674997 Msa1098150:CDS
TTTGTTACAGGAGCATATGT+TGG 0.585707 7_3:-24675768 Msa1098150:intron
TGAATGGATTTGTTCCTGGA+TGG 0.588184 7_3:-24674161 Msa1098150:CDS
GCCGCAGTTGTGGTTGTGAG+CGG 0.614257 7_3:-24675555 Msa1098150:CDS
TGTGTTTACCTTGATTGACA+AGG 0.630709 7_3:+24675730 None:intergenic
TTATGTTGCAGCCGCAGTTG+TGG 0.634810 7_3:-24675565 Msa1098150:CDS
GAAGCAAGTGAGATCAACAA+AGG 0.667780 7_3:-24676726 Msa1098150:intron
TCCGCTCACAACCACAACTG+CGG 0.669067 7_3:+24675554 None:intergenic
CAAACCTGCCAAAGAACTCG+AGG 0.673053 7_3:-24677299 Msa1098150:intron
AAAATCTTCAAAGAACACAG+AGG 0.732334 7_3:-24676926 Msa1098150:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAATTATTAATAAAAATA+AGG - chr7_3:24675514-24675533 Msa1098150:intron 0.0%
!! AATATATATTTATATACTTC+TGG - chr7_3:24675058-24675077 Msa1098150:intron 10.0%
!! TCTATTGTAAATAAATATTA+AGG - chr7_3:24675312-24675331 Msa1098150:intron 10.0%
!!! TTGATTAATGTTTTAAAAAA+CGG - chr7_3:24678726-24678745 Msa1098150:intron 10.0%
!! AAAAATCAAATCAAAATTCA+TGG + chr7_3:24674569-24674588 None:intergenic 15.0%
!!! ATTTTACTAGATCTTTTTTT+TGG + chr7_3:24674667-24674686 None:intergenic 15.0%
!!! TAAAATGAGTGTATTTTATA+CGG + chr7_3:24676163-24676182 None:intergenic 15.0%
!!! AATTAATAGTGTTGATATAT+TGG + chr7_3:24676506-24676525 None:intergenic 15.0%
!! GTAAATTATTAGAATGAATT+AGG + chr7_3:24677050-24677069 None:intergenic 15.0%
!! AATTAATAAAGCAACTTATT+TGG - chr7_3:24677546-24677565 Msa1098150:intron 15.0%
!! ATTAATAAAGCAACTTATTT+GGG - chr7_3:24677547-24677566 Msa1098150:intron 15.0%
!!! AACAATAGCTTAAATTTTTT+AGG + chr7_3:24677575-24677594 None:intergenic 15.0%
!!! TGATTTTCTCAAATTATTAA+CGG + chr7_3:24677996-24678015 None:intergenic 15.0%
!! TTTAGTATAATTATATGTGT+TGG - chr7_3:24678021-24678040 Msa1098150:intron 15.0%
!!! TTAAATTTGAAACTTTATCT+TGG + chr7_3:24678658-24678677 None:intergenic 15.0%
!! TCAAAACATATATATAAAGA+TGG + chr7_3:24679093-24679112 None:intergenic 15.0%
!!! ACTGTCTTTGTTTTATTTTT+GGG - chr7_3:24674760-24674779 Msa1098150:intron 20.0%
!!! ATTAATTTCCATGTTTTCTT+TGG - chr7_3:24674907-24674926 Msa1098150:CDS 20.0%
!!! AATTAAGTTGTTTATCTTTC+TGG - chr7_3:24674964-24674983 Msa1098150:CDS 20.0%
!! TTAATAAATGCATTACTCTA+TGG + chr7_3:24675034-24675053 None:intergenic 20.0%
!! TGTAAATAAATATTAAGGCT+AGG - chr7_3:24675317-24675336 Msa1098150:intron 20.0%
!! TTCAAGATTTATTCATTTGA+TGG - chr7_3:24675658-24675677 Msa1098150:intron 20.0%
!! AGATATGTATTCAAATATCA+GGG + chr7_3:24676115-24676134 None:intergenic 20.0%
!!! CAATATTTCAGAAATCTTTT+AGG - chr7_3:24676547-24676566 Msa1098150:intron 20.0%
!! TAGAACTTTCTTAATTAACA+TGG - chr7_3:24676679-24676698 Msa1098150:intron 20.0%
!!! TCATTTTCTCAAATTTTTAC+TGG + chr7_3:24676834-24676853 None:intergenic 20.0%
!!! GTATAACTTCAATTTTTCTT+AGG - chr7_3:24677112-24677131 Msa1098150:intron 20.0%
!! TGTACAAGAAATATCTATTA+TGG - chr7_3:24677913-24677932 Msa1098150:intron 20.0%
!!! AAAGAAAAGAAACTTTTAGA+TGG - chr7_3:24678255-24678274 Msa1098150:intron 20.0%
!! TTATCTATTTATTTGTCATC+TGG + chr7_3:24678831-24678850 None:intergenic 20.0%
!!! GAAAGCAATGTTTTAAAAAT+TGG + chr7_3:24679048-24679067 None:intergenic 20.0%
! TTGTACATGATCTAGTAAAA+TGG - chr7_3:24674638-24674657 Msa1098150:intron 25.0%
!!! GACTGTCTTTGTTTTATTTT+TGG - chr7_3:24674759-24674778 Msa1098150:intron 25.0%
!!! CTGTCTTTGTTTTATTTTTG+GGG - chr7_3:24674761-24674780 Msa1098150:intron 25.0%
!!! TGTCTTTGTTTTATTTTTGG+GGG - chr7_3:24674762-24674781 Msa1098150:intron 25.0%
! AAGCAATGTTTCAATGAAAA+AGG + chr7_3:24674810-24674829 None:intergenic 25.0%
! TCAATGAATTCAAGAATTCA+AGG + chr7_3:24675243-24675262 None:intergenic 25.0%
! TTTATAAGTCTTTCAATCCA+TGG - chr7_3:24675354-24675373 Msa1098150:intron 25.0%
!!! AAAAAAACCTTTGTTTTCCA+TGG + chr7_3:24675374-24675393 None:intergenic 25.0%
! GTTATTGTTGTATCAATTTC+TGG - chr7_3:24675454-24675473 Msa1098150:intron 25.0%
! AAAATAAGGAATTTCGAAAC+TGG - chr7_3:24675528-24675547 Msa1098150:intron 25.0%
! TTTATTCATTTGATGGAATC+TGG - chr7_3:24675665-24675684 Msa1098150:intron 25.0%
! TTATTCATTTGATGGAATCT+GGG - chr7_3:24675666-24675685 Msa1098150:intron 25.0%
! GTGCATCATAAAAAATGTAA+AGG + chr7_3:24675756-24675775 None:intergenic 25.0%
! GCACAAGAATGTTATTAAAA+TGG - chr7_3:24675772-24675791 Msa1098150:intron 25.0%
! GTTATTAAAATGGCACAATA+TGG - chr7_3:24675782-24675801 Msa1098150:intron 25.0%
! CCGTTAACTTAAATTGTTAA+CGG + chr7_3:24675839-24675858 None:intergenic 25.0%
!! CCGTTAACAATTTAAGTTAA+CGG - chr7_3:24675836-24675855 Msa1098150:intron 25.0%
!!! TTTGACATAGTTTTTTTTCC+TGG - chr7_3:24675970-24675989 Msa1098150:intron 25.0%
!! ATATCAGGGTTGATTATAAA+TGG + chr7_3:24676101-24676120 None:intergenic 25.0%
! CAGATATGTATTCAAATATC+AGG + chr7_3:24676116-24676135 None:intergenic 25.0%
! AGGATTCATCATAGTAAATT+GGG + chr7_3:24677030-24677049 None:intergenic 25.0%
! TAGGATTCATCATAGTAAAT+TGG + chr7_3:24677031-24677050 None:intergenic 25.0%
!! TCAATTTTTCTTAGGTCATT+TGG - chr7_3:24677120-24677139 Msa1098150:intron 25.0%
! ATGGTTCATATACGATATAT+TGG - chr7_3:24677171-24677190 Msa1098150:intron 25.0%
!! CTTACGATTGATAATAAGAT+TGG - chr7_3:24677257-24677276 Msa1098150:intron 25.0%
! AATGTTATTGTGACTCTTAT+TGG - chr7_3:24677423-24677442 Msa1098150:intron 25.0%
!!! TATTTTGAAGATCAGCTAAT+TGG + chr7_3:24677499-24677518 None:intergenic 25.0%
! ATTAGCTGATCTTCAAAATA+AGG - chr7_3:24677499-24677518 Msa1098150:intron 25.0%
!!! TTAAGCTATTGTTTTGTTAC+AGG - chr7_3:24677582-24677601 Msa1098150:intron 25.0%
!!! CTCATATTTGTTTTGAATTG+TGG - chr7_3:24677680-24677699 Msa1098150:intron 25.0%
!! TGCATTTTCTTGCAATATAA+AGG + chr7_3:24677724-24677743 None:intergenic 25.0%
!!! GCTGCAACATAATTTTTTTT+AGG + chr7_3:24677789-24677808 None:intergenic 25.0%
!! CAGTCAAATATATTTTCAGA+AGG + chr7_3:24678322-24678341 None:intergenic 25.0%
! AGAAATGATCGATGAAATTT+AGG - chr7_3:24678584-24678603 Msa1098150:intron 25.0%
ACATTTGCAAAGAGAAGAAA+TGG - chr7_3:24674209-24674228 Msa1098150:CDS 30.0%
CAAGTACATGTAGATCTAAT+AGG + chr7_3:24674431-24674450 None:intergenic 30.0%
AAATGTTTATGTCCCTTGTA+CGG - chr7_3:24674711-24674730 Msa1098150:intron 30.0%
! ATGAACTTTTTGCAGAAAGA+GGG - chr7_3:24675103-24675122 Msa1098150:intron 30.0%
GGGCTATTAGATAATAGATA+GGG - chr7_3:24675130-24675149 Msa1098150:intron 30.0%
TTTCAATCCATGGAAAACAA+AGG - chr7_3:24675364-24675383 Msa1098150:intron 30.0%
TGCACTTTCTACAATTGTAA+TGG - chr7_3:24675725-24675744 Msa1098150:intron 30.0%
TTGAATTTAACCACATGTGT+CGG - chr7_3:24675865-24675884 Msa1098150:CDS 30.0%
! AGTGTATTTTATACGGTGTT+GGG + chr7_3:24676156-24676175 None:intergenic 30.0%
AAAATCTTCAAAGAACACAG+AGG - chr7_3:24676436-24676455 Msa1098150:intron 30.0%
!! AAATCTTTTAGGTGAAGACT+TGG - chr7_3:24676558-24676577 Msa1098150:intron 30.0%
!! AATCTTTTAGGTGAAGACTT+GGG - chr7_3:24676559-24676578 Msa1098150:intron 30.0%
!! TCAAGATCTTTAGAACTTAG+TGG + chr7_3:24676586-24676605 None:intergenic 30.0%
! TGTTTGATTTCAACATGTGT+CGG + chr7_3:24676913-24676932 None:intergenic 30.0%
GGATTCATCATAGTAAATTG+GGG + chr7_3:24677029-24677048 None:intergenic 30.0%
TACAAAGATGACAGAAAAAG+TGG + chr7_3:24677095-24677114 None:intergenic 30.0%
TTCATGATTTGAATCTCGTT+TGG - chr7_3:24677308-24677327 Msa1098150:CDS 30.0%
AAGAAACTAAATTGAGCTAC+TGG + chr7_3:24677344-24677363 None:intergenic 30.0%
AGAGTCACAATAACATTCAA+GGG + chr7_3:24677420-24677439 None:intergenic 30.0%
AAGAGTCACAATAACATTCA+AGG + chr7_3:24677421-24677440 None:intergenic 30.0%
ATTGGTTACATTGAACTGTT+TGG - chr7_3:24677441-24677460 Msa1098150:intron 30.0%
GAGATGAATATCATGTATAC+TGG + chr7_3:24677663-24677682 None:intergenic 30.0%
! CGGAATGCAATTTAAAACAA+TGG - chr7_3:24677827-24677846 Msa1098150:intron 30.0%
TCTCAAATTATTAACGGTGT+AGG + chr7_3:24677990-24678009 None:intergenic 30.0%
CTAAGACCAATTCTAAATTG+TGG + chr7_3:24678135-24678154 None:intergenic 30.0%
!! TGACTGTAATTTGTTTCAGT+TGG - chr7_3:24678336-24678355 Msa1098150:intron 30.0%
AACCTCTTCGTAATAATTTG+TGG - chr7_3:24678514-24678533 Msa1098150:intron 30.0%
! CAGTTTATTACAGGTTGAAA+CGG + chr7_3:24678926-24678945 None:intergenic 30.0%
TTTCAACCTGTAATAAACTG+TGG - chr7_3:24678926-24678945 Msa1098150:intron 30.0%
ATTGAACCACAGTTTATTAC+AGG + chr7_3:24678935-24678954 None:intergenic 30.0%
CAACCTGACTACATTATAAT+TGG - chr7_3:24678961-24678980 Msa1098150:intron 30.0%
GATCCAATTATAATGTAGTC+AGG + chr7_3:24678967-24678986 None:intergenic 30.0%
!! GAACAAGTTGGTTTACTATT+TGG + chr7_3:24678993-24679012 None:intergenic 30.0%
ATAATCAGAACTGCAAGATA+GGG + chr7_3:24679123-24679142 None:intergenic 30.0%
TATAATCAGAACTGCAAGAT+AGG + chr7_3:24679124-24679143 None:intergenic 30.0%
! TATCTTGCAGTTCTGATTAT+AGG - chr7_3:24679123-24679142 Msa1098150:CDS 30.0%
ACCAAAAAGTAACCGTACAA+GGG + chr7_3:24674726-24674745 None:intergenic 35.0%
AACCAAAAAGTAACCGTACA+AGG + chr7_3:24674727-24674746 None:intergenic 35.0%
!!! TTGGGGGTGTTTTTGATATT+AGG - chr7_3:24674778-24674797 Msa1098150:intron 35.0%
!! TTTTCTTTGGAAGCTTGGTT+AGG - chr7_3:24674920-24674939 Msa1098150:CDS 35.0%
! GATGAACTTTTTGCAGAAAG+AGG - chr7_3:24675102-24675121 Msa1098150:intron 35.0%
! TGAACTTTTTGCAGAAAGAG+GGG - chr7_3:24675104-24675123 Msa1098150:intron 35.0%
GGGGCTATTAGATAATAGAT+AGG - chr7_3:24675129-24675148 Msa1098150:intron 35.0%
TTGAAATCTGTTGATGTTGC+TGG - chr7_3:24675264-24675283 Msa1098150:intron 35.0%
TAAGGAATTTCGAAACTGGT+AGG - chr7_3:24675532-24675551 Msa1098150:intron 35.0%
! ATATACATTGAAGGTGTGTC+AGG + chr7_3:24675911-24675930 None:intergenic 35.0%
! ATTTTCTTTGTAGCAAGCAC+CGG + chr7_3:24675937-24675956 None:intergenic 35.0%
! GAGTGTATTTTATACGGTGT+TGG + chr7_3:24676157-24676176 None:intergenic 35.0%
!! TACACTCATTTTAGTGCGTT+CGG - chr7_3:24676170-24676189 Msa1098150:intron 35.0%
ATCAGAAACCGTATAGAATG+TGG - chr7_3:24676226-24676245 Msa1098150:intron 35.0%
TGACATCAAACAACGTATTC+CGG + chr7_3:24676252-24676271 None:intergenic 35.0%
GTTTCAGCTTCAAGTATTCA+CGG + chr7_3:24676407-24676426 None:intergenic 35.0%
!! ATCTTTTAGGTGAAGACTTG+GGG - chr7_3:24676560-24676579 Msa1098150:intron 35.0%
GAGTTGCATTCTCTAATCAA+AGG + chr7_3:24676938-24676957 None:intergenic 35.0%
! ACGATTCAGAAAAGTGTACT+CGG - chr7_3:24677284-24677303 Msa1098150:intron 35.0%
TCACAATAACATTCAAGGGA+AGG + chr7_3:24677416-24677435 None:intergenic 35.0%
! TTTGTTACAGGAGCATATGT+TGG - chr7_3:24677594-24677613 Msa1098150:intron 35.0%
AAACAGATCCTTGTCAATCA+AGG - chr7_3:24677624-24677643 Msa1098150:intron 35.0%
TGTGTTTACCTTGATTGACA+AGG + chr7_3:24677635-24677654 None:intergenic 35.0%
! CCTAATCTTCTTCTAGCTAT+GGG + chr7_3:24677858-24677877 None:intergenic 35.0%
! ACCTAATCTTCTTCTAGCTA+TGG + chr7_3:24677859-24677878 None:intergenic 35.0%
GTATGATGGTTTATGAAGCA+CGG + chr7_3:24678088-24678107 None:intergenic 35.0%
! TACGGACCACAATTTAGAAT+TGG - chr7_3:24678126-24678145 Msa1098150:intron 35.0%
!! CTGTAATTTGTTTCAGTTGG+AGG - chr7_3:24678339-24678358 Msa1098150:intron 35.0%
TCAATTCCAGAAATCACTAC+CGG - chr7_3:24678365-24678384 Msa1098150:intron 35.0%
ATATTGCATGCTTTGATCAC+CGG + chr7_3:24678404-24678423 None:intergenic 35.0%
TATTACCCAATCTGCAATGT+AGG + chr7_3:24678481-24678500 None:intergenic 35.0%
AGCCACAAATTATTACGAAG+AGG + chr7_3:24678519-24678538 None:intergenic 35.0%
AAACTTTAACAGATGTCCCA+AGG - chr7_3:24678676-24678695 Msa1098150:intron 35.0%
AAATGCTAACAAGTGTCCTT+GGG + chr7_3:24678695-24678714 None:intergenic 35.0%
TCACTCACTCATTTGATCTT+TGG + chr7_3:24678753-24678772 None:intergenic 35.0%
CAATTGAACCAATTACCTAG+AGG + chr7_3:24678778-24678797 None:intergenic 35.0%
! CTCTAGGTAATTGGTTCAAT+TGG - chr7_3:24678776-24678795 Msa1098150:intron 35.0%
! TTTGTCATCTGGTTCAACTT+TGG + chr7_3:24678820-24678839 None:intergenic 35.0%
CCGATTTAATTGGTTGAACT+GGG + chr7_3:24679015-24679034 None:intergenic 35.0%
CCCAGTTCAACCAATTAAAT+CGG - chr7_3:24679012-24679031 Msa1098150:intron 35.0%
! ACCGATTTAATTGGTTGAAC+TGG + chr7_3:24679016-24679035 None:intergenic 35.0%
! ATCGAACTGACCGATTTAAT+TGG + chr7_3:24679025-24679044 None:intergenic 35.0%
TTCTGTTCTTTGTGATGCTG+AGG - chr7_3:24674256-24674275 Msa1098150:intron 40.0%
CTTATCATCTTCTCTACTCG+TGG - chr7_3:24674284-24674303 Msa1098150:intron 40.0%
!!! TCCCTTGTACGGTTACTTTT+TGG - chr7_3:24674722-24674741 Msa1098150:intron 40.0%
CCAAGCTTCCAAAGAAAACA+TGG + chr7_3:24674918-24674937 None:intergenic 40.0%
!! CCATGTTTTCTTTGGAAGCT+TGG - chr7_3:24674915-24674934 Msa1098150:CDS 40.0%
TGCATTACTCTATGGTTCAG+AGG + chr7_3:24675026-24675045 None:intergenic 40.0%
! TTTTTGCAGAAAGAGGGGAA+GGG - chr7_3:24675109-24675128 Msa1098150:intron 40.0%
CACCTTCAATGTATATCGTC+CGG - chr7_3:24675915-24675934 Msa1098150:intron 40.0%
GCATGCTCAAAACTCTTGAT+AGG - chr7_3:24676005-24676024 Msa1098150:intron 40.0%
AATAGCTACCTCGAGTTCTT+TGG + chr7_3:24676074-24676093 None:intergenic 40.0%
TATTCCGGCCACATTCTATA+CGG + chr7_3:24676237-24676256 None:intergenic 40.0%
AAGATCTTGAGCAGCTTGAA+CGG - chr7_3:24676596-24676615 Msa1098150:intron 40.0%
GAAGCAAGTGAGATCAACAA+AGG - chr7_3:24676636-24676655 Msa1098150:intron 40.0%
TGTCAGTAACATGTTGCTGT+TGG - chr7_3:24676884-24676903 Msa1098150:intron 40.0%
AGGGAAGGAGCTATTACATA+AGG + chr7_3:24677401-24677420 None:intergenic 40.0%
TTTGCAGACACAATTCATGC+TGG - chr7_3:24677472-24677491 Msa1098150:intron 40.0%
TTGTGGCTGTTGTTATGCTA+CGG - chr7_3:24677697-24677716 Msa1098150:intron 40.0%
CCCATAGCTAGAAGAAGATT+AGG - chr7_3:24677855-24677874 Msa1098150:intron 40.0%
CAATTACGGTTGCTGTATGA+TGG + chr7_3:24678102-24678121 None:intergenic 40.0%
AGCAACCGTAATTGCAGTTA+CGG - chr7_3:24678108-24678127 Msa1098150:intron 40.0%
AAATCACTACCGGCAATCAT+GGG - chr7_3:24678375-24678394 Msa1098150:intron 40.0%
GGTGATCAAAGCATGCAATA+TGG - chr7_3:24678403-24678422 Msa1098150:intron 40.0%
TGCAATCCTACATTGCAGAT+TGG - chr7_3:24678472-24678491 Msa1098150:intron 40.0%
GCAATCCTACATTGCAGATT+GGG - chr7_3:24678473-24678492 Msa1098150:intron 40.0%
TCATGCTAACAAGTGTTCTC+AGG - chr7_3:24678538-24678557 Msa1098150:intron 40.0%
CATGCTAACAAGTGTTCTCA+GGG - chr7_3:24678539-24678558 Msa1098150:intron 40.0%
CAAATGCTAACAAGTGTCCT+TGG + chr7_3:24678696-24678715 None:intergenic 40.0%
! TACAGGTTGAAACGGTTCAA+CGG + chr7_3:24678918-24678937 None:intergenic 40.0%
CAAGCTCAACAACAAGTGAA+TGG - chr7_3:24679185-24679204 Msa1098150:CDS 40.0%
! CAAGTGAATGGATTTGTTCC+TGG - chr7_3:24679197-24679216 Msa1098150:CDS 40.0%
! TGAATGGATTTGTTCCTGGA+TGG - chr7_3:24679201-24679220 Msa1098150:CDS 40.0%
!! GAGGAAGAGTTGAGTTGAAG+AGG - chr7_3:24674159-24674178 Msa1098150:CDS 45.0%
CTTGGTTAGGTGACTCTTGA+TGG - chr7_3:24674933-24674952 Msa1098150:CDS 45.0%
! CTTTTTGCAGAAAGAGGGGA+AGG - chr7_3:24675108-24675127 Msa1098150:intron 45.0%
! TTTTGCAGAAAGAGGGGAAG+GGG - chr7_3:24675110-24675129 Msa1098150:intron 45.0%
CACCGGACGATATACATTGA+AGG + chr7_3:24675920-24675939 None:intergenic 45.0%
!!! GCATGCTGTTTTGACAAACC+AGG + chr7_3:24675991-24676010 None:intergenic 45.0%
! AGGTACCAGAAGTGCAGTTA+TGG - chr7_3:24676025-24676044 Msa1098150:intron 45.0%
GAAACCGTATAGAATGTGGC+CGG - chr7_3:24676230-24676249 Msa1098150:intron 45.0%
ATGTGTCTCTAGCGTGTATC+TGG - chr7_3:24676960-24676979 Msa1098150:CDS 45.0%
AGTCGATGCAGATGAAATCG+CGG - chr7_3:24677743-24677762 Msa1098150:intron 45.0%
!! ATATGTGTTGGTGTCGTGTC+CGG - chr7_3:24678033-24678052 Msa1098150:intron 45.0%
TATGAAGCACGGACACTACT+CGG + chr7_3:24678077-24678096 None:intergenic 45.0%
GTGGTCCGTAACTGCAATTA+CGG + chr7_3:24678116-24678135 None:intergenic 45.0%
TGATTGCCGGTAGTGATTTC+TGG + chr7_3:24678374-24678393 None:intergenic 45.0%
GAAATCACTACCGGCAATCA+TGG - chr7_3:24678374-24678393 Msa1098150:intron 45.0%
! TGTTCTCAGGGCACTTGTTA+AGG - chr7_3:24678551-24678570 Msa1098150:intron 45.0%
AATGAGTGAGTGAGACCTCT+AGG - chr7_3:24678760-24678779 Msa1098150:intron 45.0%
GAGTGAGACCTCTAGGTAAT+TGG - chr7_3:24678767-24678786 Msa1098150:intron 45.0%
TGGTTGAACTGGGAACAAGT+TGG + chr7_3:24679005-24679024 None:intergenic 45.0%
!! ATAAAAAAAAATTCAAATTT+AGG + chr7_3:24677153-24677172 None:intergenic 5.0%
!!! TAAATTTGAATTTTTTTTTA+TGG - chr7_3:24677152-24677171 Msa1098150:intron 5.0%
!! ATATATAATTTATTAAACTA+AGG + chr7_3:24678158-24678177 None:intergenic 5.0%
! GATGTTGCTGGAAAGTGTGC+TGG - chr7_3:24675276-24675295 Msa1098150:intron 50.0%
TGACATGACACCGACACATG+TGG + chr7_3:24675878-24675897 None:intergenic 50.0%
CAGCACCATAACTGCACTTC+TGG + chr7_3:24676033-24676052 None:intergenic 50.0%
CAAACCTGCCAAAGAACTCG+AGG - chr7_3:24676063-24676082 Msa1098150:intron 50.0%
TGAGCAGCTTGAACGGCAAT+TGG - chr7_3:24676603-24676622 Msa1098150:intron 50.0%
TTATGTTGCAGCCGCAGTTG+TGG - chr7_3:24677797-24677816 Msa1098150:intron 50.0%
TAGGATTGCAATCCAGCTGC+TGG + chr7_3:24678462-24678481 None:intergenic 50.0%
GCTACCTCGAGTTCTTTGGC+AGG + chr7_3:24676070-24676089 None:intergenic 55.0%
TCCGCTCACAACCACAACTG+CGG + chr7_3:24677811-24677830 None:intergenic 55.0%
TACTCGGACAAGGTGTGTCC+CGG + chr7_3:24678061-24678080 None:intergenic 55.0%
TACCGGCAATCATGGGAAGC+CGG - chr7_3:24678382-24678401 Msa1098150:intron 55.0%
TCAGAGCTTCTTCCAGCAGC+TGG - chr7_3:24678447-24678466 Msa1098150:intron 55.0%
GCCGCAGTTGTGGTTGTGAG+CGG - chr7_3:24677807-24677826 Msa1098150:intron 60.0%
GCACGGACACTACTCGGACA+AGG + chr7_3:24678071-24678090 None:intergenic 60.0%
!! CACCGGCTTCCCATGATTGC+CGG + chr7_3:24678387-24678406 None:intergenic 60.0%
!! GTTGGTGTCGTGTCCGGCAC+CGG - chr7_3:24678039-24678058 Msa1098150:intron 65.0%
!! TTGGTGTCGTGTCCGGCACC+GGG - chr7_3:24678040-24678059 Msa1098150:intron 65.0%
GACAAGGTGTGTCCCGGTGC+CGG + chr7_3:24678055-24678074 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 24674152 24679232 24674152 ID=Msa1098150;Name=Msa1098150
chr7_3 mRNA 24674152 24679232 24674152 ID=Msa1098150-mRNA-1;Parent=Msa1098150;Name=Msa1098150-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|0.88|1|1|9|0|271
chr7_3 exon 24679048 24679232 24679048 ID=Msa1098150-mRNA-1:exon:5352;Parent=Msa1098150-mRNA-1
chr7_3 exon 24677300 24677378 24677300 ID=Msa1098150-mRNA-1:exon:5351;Parent=Msa1098150-mRNA-1
chr7_3 exon 24676927 24676988 24676927 ID=Msa1098150-mRNA-1:exon:5350;Parent=Msa1098150-mRNA-1
chr7_3 exon 24676727 24676826 24676727 ID=Msa1098150-mRNA-1:exon:5349;Parent=Msa1098150-mRNA-1
chr7_3 exon 24675864 24675905 24675864 ID=Msa1098150-mRNA-1:exon:5348;Parent=Msa1098150-mRNA-1
chr7_3 exon 24675739 24675780 24675739 ID=Msa1098150-mRNA-1:exon:5347;Parent=Msa1098150-mRNA-1
chr7_3 exon 24675536 24675601 24675536 ID=Msa1098150-mRNA-1:exon:5346;Parent=Msa1098150-mRNA-1
chr7_3 exon 24674890 24675029 24674890 ID=Msa1098150-mRNA-1:exon:5345;Parent=Msa1098150-mRNA-1
chr7_3 exon 24674152 24674251 24674152 ID=Msa1098150-mRNA-1:exon:5344;Parent=Msa1098150-mRNA-1
chr7_3 CDS 24679048 24679232 24679048 ID=Msa1098150-mRNA-1:cds;Parent=Msa1098150-mRNA-1
chr7_3 CDS 24677300 24677378 24677300 ID=Msa1098150-mRNA-1:cds;Parent=Msa1098150-mRNA-1
chr7_3 CDS 24676927 24676988 24676927 ID=Msa1098150-mRNA-1:cds;Parent=Msa1098150-mRNA-1
chr7_3 CDS 24676727 24676826 24676727 ID=Msa1098150-mRNA-1:cds;Parent=Msa1098150-mRNA-1
chr7_3 CDS 24675864 24675905 24675864 ID=Msa1098150-mRNA-1:cds;Parent=Msa1098150-mRNA-1
chr7_3 CDS 24675739 24675780 24675739 ID=Msa1098150-mRNA-1:cds;Parent=Msa1098150-mRNA-1
chr7_3 CDS 24675536 24675601 24675536 ID=Msa1098150-mRNA-1:cds;Parent=Msa1098150-mRNA-1
chr7_3 CDS 24674890 24675029 24674890 ID=Msa1098150-mRNA-1:cds;Parent=Msa1098150-mRNA-1
chr7_3 CDS 24674152 24674251 24674152 ID=Msa1098150-mRNA-1:cds;Parent=Msa1098150-mRNA-1
Gene Sequence

>Msa1098150

ATGGGAAGAGGAAGAGTTGAGTTGAAGAGGATAGAGAACAAGATAAACAGACAAGTTACATTTGCAAAGAGAAGAAATGGTCTTCTTAAGAAAGCTTATGAACTTTCTGTTCTTTGTGATGCTGAGGTTGCTCTTATCATCTTCTCTACTCGTGGAAAGCTTTATGAATTTTGTAGCACATCTAACATGCTCAAAACTCTTGATAGGTACCAGAAGTGCAGTTATGGTGCTGTAGAAGTTAGCAAACCTGCCAAAGAACTCGAGAGCAGCTACCGTGAATACTTGAAGCTGAAACAAAGATTTGAAAATCTTCAAAGAACACAGAGAAATCTTTTAGGTGAAGACTTGGGGCCACTAAGTTCTAAAGATCTTGAGCAGCTTGAACGGCAATTGGATTCATCTCTGAAGCAAGTGAGATCAACAAAGACACAATTCATGCTGGACCAATTAGCTGATCTTCAAAATAAGGAGCATATGTTGGTTGAAGCAAACAGATCCTTGTCAATCAAGAGACCTAAAAAAAATTATGTTGCAGCCGCAGTTGTGGTTGTGAGCGGAATGCAATTTAAAACAATGTTGGAGGAAATCAATTCCAGAAATCACTACCGGCAATCATGGGAAGCCGGTGATCAAAGCATGCAATATGGTGATCAGCAGAATGCTCACTCTCAGAGCTTCTTCCAGCAGCTGGATTGCAATCCTACATTGCAGATTGGTTCTGATTATAGGTACAACAATGTAGCTTCAGATCAGATAGCTTCAACAAGTCAAGCTCAACAACAAGTGAATGGATTTGTTCCTGGATGGATGCTATAA
Protein sequence

>Msa1098150

MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGKLYEFCSTSNMLKTLDRYQKCSYGAVEVSKPAKELESSYREYLKLKQRFENLQRTQRNLLGEDLGPLSSKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLSIKRPKKNYVAAAVVVVSGMQFKTMLEEINSRNHYRQSWEAGDQSMQYGDQQNAHSQSFFQQLDCNPTLQIGSDYRYNNVASDQIASTSQAQQQVNGFVPGWML*