AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1100750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1100750 MtrunA17_Chr7g0217711 90.385 156 15 0 1 156 12 167 1.26e-104 296
Msa1100750 MtrunA17_Chr7g0217721 90.000 160 10 1 1 154 12 171 3.38e-104 301
Msa1100750 MtrunA17_Chr4g0060931 72.297 148 34 1 2 149 11 151 1.24e-72 221
Msa1100750 MtrunA17_Chr6g0453451 71.242 153 37 2 3 155 15 160 1.92e-72 220
Msa1100750 MtrunA17_Chr3g0091921 73.881 134 35 0 2 135 10 143 7.36e-69 210
Msa1100750 MtrunA17_Chr2g0316971 76.923 130 28 1 8 135 23 152 1.64e-67 209
Msa1100750 MtrunA17_Chr6g0461661 70.370 135 38 1 3 135 13 147 8.94e-67 207
Msa1100750 MtrunA17_Chr7g0253011 65.132 152 42 3 2 149 11 155 9.92e-65 202
Msa1100750 MtrunA17_Chr6g0484441 71.654 127 36 0 8 134 5 131 1.40e-64 200
Msa1100750 MtrunA17_Chr3g0144271 68.889 135 39 2 8 139 23 157 9.68e-61 193
Msa1100750 MtrunA17_Chr1g0147421 67.669 133 40 2 8 137 27 159 3.45e-60 190
Msa1100750 MtrunA17_Chr3g0139331 65.909 132 43 1 8 137 11 142 1.36e-59 188
Msa1100750 MtrunA17_Chr3g0113001 84.848 99 9 1 56 154 13 105 3.59e-57 180
Msa1100750 MtrunA17_Chr2g0312321 61.364 132 47 2 5 135 8 136 2.58e-53 171
Msa1100750 MtrunA17_Chr4g0017921 64.341 129 43 1 9 134 9 137 7.29e-52 168
Msa1100750 MtrunA17_Chr4g0056541 59.542 131 50 1 9 136 8 138 7.47e-52 168
Msa1100750 MtrunA17_Chr4g0018391 58.015 131 52 1 9 136 8 138 1.76e-51 167
Msa1100750 MtrunA17_Chr5g0398971 59.091 132 50 2 9 136 8 139 2.67e-51 167
Msa1100750 MtrunA17_Chr1g0183741 54.962 131 57 1 6 134 8 138 1.15e-50 163
Msa1100750 MtrunA17_Chr2g0309331 55.634 142 59 2 5 142 7 148 2.34e-50 164
Msa1100750 MtrunA17_Chr8g0372121 58.140 129 51 1 9 134 7 135 3.30e-50 163
Msa1100750 MtrunA17_Chr5g0405211 53.957 139 61 1 1 136 1 139 1.30e-49 162
Msa1100750 MtrunA17_Chr8g0359921 58.140 129 54 0 5 133 11 139 1.44e-49 162
Msa1100750 MtrunA17_Chr2g0309891 55.944 143 57 2 6 142 4 146 1.76e-49 162
Msa1100750 MtrunA17_Chr8g0346001 54.167 144 63 1 3 143 10 153 2.95e-49 163
Msa1100750 MtrunA17_Chr5g0428991 58.594 128 51 1 7 132 24 151 7.74e-49 166
Msa1100750 MtrunA17_Chr2g0318081 55.639 133 59 0 5 137 13 145 8.03e-49 160
Msa1100750 MtrunA17_Chr3g0124761 56.589 129 55 1 5 133 4 131 1.95e-48 157
Msa1100750 MtrunA17_Chr7g0261411 54.198 131 58 1 6 134 8 138 2.14e-48 157
Msa1100750 MtrunA17_Chr3g0128151 59.843 127 49 1 8 132 22 148 2.27e-48 164
Msa1100750 MtrunA17_Chr6g0481091 58.015 131 53 1 6 134 4 134 3.02e-48 155
Msa1100750 MtrunA17_Chr3g0128111 58.871 124 49 1 11 132 45 168 3.56e-48 155
Msa1100750 MtrunA17_Chr8g0384721 54.861 144 62 2 6 149 5 145 5.93e-48 156
Msa1100750 MtrunA17_Chr3g0113031 84.884 86 7 1 69 154 1 80 1.37e-47 155
Msa1100750 MtrunA17_Chr5g0433781 57.252 131 54 1 6 134 4 134 1.97e-47 162
Msa1100750 MtrunA17_Chr5g0417791 55.725 131 58 0 6 136 1 131 2.00e-47 154
Msa1100750 MtrunA17_Chr1g0200561 55.906 127 53 1 9 132 20 146 3.75e-47 156
Msa1100750 MtrunA17_Chr3g0130731 56.589 129 55 1 5 133 4 131 3.79e-47 154
Msa1100750 MtrunA17_Chr3g0109821 56.489 131 55 1 6 134 4 134 1.41e-46 160
Msa1100750 MtrunA17_Chr4g0042561 55.385 130 58 0 7 136 8 137 1.62e-46 152
Msa1100750 MtrunA17_Chr4g0047841 56.250 128 54 1 8 133 15 142 1.76e-46 154
Msa1100750 MtrunA17_Chr2g0318101 54.074 135 60 1 4 136 11 145 1.94e-46 154
Msa1100750 MtrunA17_Chr7g0252971 52.055 146 61 1 1 137 1 146 3.62e-46 153
Msa1100750 MtrunA17_Chr7g0263931 53.237 139 63 1 3 139 6 144 8.18e-46 152
Msa1100750 MtrunA17_Chr2g0326361 52.174 138 64 1 8 143 14 151 1.69e-44 148
Msa1100750 MtrunA17_Chr7g0214071 54.815 135 54 3 2 133 9 139 2.21e-44 146
Msa1100750 MtrunA17_Chr8g0361731 53.788 132 58 2 4 133 11 141 5.54e-44 149
Msa1100750 MtrunA17_Chr5g0400461 52.555 137 56 2 6 133 4 140 2.62e-43 145
Msa1100750 MtrunA17_Chr6g0453131 51.049 143 67 2 11 150 18 160 5.24e-43 146
Msa1100750 MtrunA17_Chr4g0054791 51.111 135 61 2 4 133 2 136 7.47e-43 144
Msa1100750 MtrunA17_Chr5g0417001 53.788 132 58 2 4 133 11 141 1.01e-42 145
Msa1100750 MtrunA17_Chr1g0201021 53.077 130 59 1 11 138 22 151 5.50e-42 146
Msa1100750 MtrunA17_Chr8g0364791 50.000 132 64 1 11 140 9 140 4.64e-41 142
Msa1100750 MtrunA17_Chr8g0384201 47.794 136 69 1 7 140 5 140 1.44e-40 142
Msa1100750 MtrunA17_Chr3g0130101 48.592 142 70 2 1 140 1 141 2.75e-40 138
Msa1100750 MtrunA17_Chr1g0197361 51.128 133 62 2 11 140 11 143 3.33e-40 142
Msa1100750 MtrunA17_Chr4g0076731 49.624 133 66 1 11 142 57 189 5.33e-40 139
Msa1100750 MtrunA17_Chr3g0092671 53.968 126 55 2 11 133 8 133 5.98e-40 140
Msa1100750 MtrunA17_Chr1g0197351 54.472 123 54 1 11 131 45 167 5.83e-39 137
Msa1100750 MtrunA17_Chr2g0311661 48.227 141 67 3 1 136 15 154 1.17e-38 132
Msa1100750 MtrunA17_Chr2g0311651 48.921 139 65 3 3 136 18 155 5.77e-38 131
Msa1100750 MtrunA17_Chr8g0345671 55.469 128 51 5 9 131 12 138 7.02e-38 133
Msa1100750 MtrunA17_Chr5g0442771 48.872 133 64 2 4 133 15 146 1.22e-37 130
Msa1100750 MtrunA17_Chr4g0038751 47.143 140 70 2 1 137 9 147 1.36e-36 127
Msa1100750 MtrunA17_Chr8g0345691 51.938 129 56 4 9 132 13 140 2.60e-36 129
Msa1100750 MtrunA17_Chr2g0321741 50.943 106 51 1 27 131 11 116 2.57e-35 125
Msa1100750 MtrunA17_Chr8g0385991 44.444 135 71 2 1 133 7 139 9.90e-34 118
Msa1100750 MtrunA17_Chr3g0131911 43.066 137 72 2 1 133 7 141 1.27e-32 115
Msa1100750 MtrunA17_Chr2g0321631 46.565 131 63 4 9 132 5 135 4.68e-32 114
Msa1100750 MtrunA17_Chr3g0113011 88.889 54 6 0 1 54 12 65 1.18e-31 108
Msa1100750 MtrunA17_Chr8g0345711 46.923 130 63 4 8 132 12 140 1.70e-31 111
Msa1100750 MtrunA17_Chr4g0026141 45.038 131 66 3 8 132 5 135 2.98e-31 112
Msa1100750 MtrunA17_Chr3g0113041 88.889 54 6 0 1 54 12 65 9.43e-30 103
Msa1100750 MtrunA17_Chr8g0345731 44.697 132 66 4 8 132 24 155 2.09e-29 105
Msa1100750 MtrunA17_Chr8g0345701 45.455 143 56 7 9 132 8 147 2.00e-28 103
Msa1100750 MtrunA17_Chr7g0266701 43.182 132 68 4 8 132 4 135 3.24e-27 102
Msa1100750 MtrunA17_Chr8g0345721 38.462 156 61 5 10 131 37 191 4.11e-26 98.2
Msa1100750 MtrunA17_Chr8g0345741 46.218 119 58 5 19 132 2 119 2.78e-25 94.7
Msa1100750 MtrunA17_Chr4g0050701 37.500 128 70 2 8 133 11 130 3.69e-24 92.8
Msa1100750 MtrunA17_Chr7g0243371 52.564 78 35 1 61 136 17 94 5.42e-24 90.1
Msa1100750 MtrunA17_Chr7g0251661 34.328 134 82 5 1 131 3 133 9.91e-19 77.8
Msa1100750 MtrunA17_Chr8g0384351 38.168 131 65 4 6 136 8 122 1.95e-17 75.1
Msa1100750 MtrunA17_Chr7g0251651 34.109 129 79 5 6 131 16 141 2.52e-16 72.4
Msa1100750 MtrunA17_Chr3g0130321 32.237 152 89 4 4 153 3 142 1.06e-15 70.9
Msa1100750 MtrunA17_Chr4g0040541 31.757 148 83 4 3 133 43 189 4.14e-14 67.8
Msa1100750 MtrunA17_Chr8g0367761 31.333 150 86 4 3 136 63 211 1.46e-12 63.2
Msa1100750 MtrunA17_Chr7g0251671 30.303 132 86 4 3 131 5 133 2.60e-12 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1100750 AT5G61430.1 72.973 148 33 1 2 149 10 150 3.03e-73 223
Msa1100750 AT3G29035.1 75.373 134 33 0 2 135 18 151 2.27e-70 215
Msa1100750 AT5G07680.1 71.127 142 40 1 2 143 11 151 3.37e-69 212
Msa1100750 AT5G39610.1 74.627 134 34 0 2 135 14 147 3.47e-68 208
Msa1100750 AT5G07680.2 73.529 136 35 1 8 143 3 137 4.32e-68 209
Msa1100750 AT5G18270.1 72.180 133 36 1 4 135 17 149 9.58e-66 204
Msa1100750 AT5G18270.2 72.180 133 36 1 4 135 17 149 1.28e-65 203
Msa1100750 AT3G18400.1 71.094 128 37 0 8 135 5 132 8.72e-65 201
Msa1100750 AT5G53950.1 73.077 130 33 1 8 135 17 146 3.13e-64 201
Msa1100750 AT3G04060.1 68.889 135 41 1 2 135 14 148 1.79e-63 198
Msa1100750 AT3G15170.1 69.343 137 39 2 1 135 14 149 6.17e-62 193
Msa1100750 AT2G24430.2 67.647 136 42 1 4 137 12 147 6.48e-62 193
Msa1100750 AT2G24430.1 67.647 136 42 1 4 137 12 147 6.48e-62 193
Msa1100750 AT1G76420.1 65.693 137 45 1 2 136 16 152 4.55e-61 192
Msa1100750 AT1G56010.2 52.703 148 64 2 5 151 16 158 9.17e-53 170
Msa1100750 AT3G12977.1 52.985 134 63 0 5 138 15 148 1.01e-52 169
Msa1100750 AT1G12260.2 58.779 131 51 1 9 136 8 138 2.23e-51 167
Msa1100750 AT4G10350.1 62.791 129 45 1 9 134 10 138 2.37e-51 167
Msa1100750 AT2G46770.1 56.429 140 58 1 3 139 11 150 2.44e-51 167
Msa1100750 AT1G12260.1 59.690 129 49 1 9 134 8 136 4.59e-51 167
Msa1100750 AT1G62700.1 58.519 135 53 1 3 134 2 136 7.04e-51 167
Msa1100750 AT1G62700.2 58.519 135 53 1 3 134 2 136 7.04e-51 167
Msa1100750 AT1G33280.1 57.664 137 55 1 1 134 1 137 5.51e-50 162
Msa1100750 AT4G36160.1 54.745 137 59 1 3 136 5 141 5.95e-50 164
Msa1100750 AT4G36160.3 54.745 137 59 1 3 136 5 141 5.95e-50 164
Msa1100750 AT4G36160.2 54.745 137 59 1 3 136 9 145 7.41e-50 164
Msa1100750 AT4G35580.1 51.250 160 66 3 8 155 9 168 1.09e-49 166
Msa1100750 AT4G35580.2 51.250 160 66 3 8 155 9 168 1.43e-49 167
Msa1100750 AT4G35580.3 51.250 160 66 3 8 155 9 168 1.57e-49 166
Msa1100750 AT2G18060.3 54.412 136 59 1 4 136 5 140 2.05e-49 162
Msa1100750 AT2G18060.1 54.412 136 59 1 4 136 5 140 2.05e-49 162
Msa1100750 AT1G33060.1 59.843 127 49 1 8 132 24 150 2.89e-49 167
Msa1100750 AT1G33060.2 59.843 127 49 1 8 132 24 150 3.01e-49 167
Msa1100750 AT1G71930.2 52.174 138 63 1 5 139 6 143 3.15e-49 161
Msa1100750 AT1G71930.1 52.174 138 63 1 5 139 6 143 3.15e-49 161
Msa1100750 AT4G27410.2 54.412 136 62 0 5 140 11 146 3.49e-49 160
Msa1100750 AT5G61430.2 79.787 94 12 1 56 149 1 87 4.49e-49 159
Msa1100750 AT3G61910.1 53.237 139 62 1 3 138 6 144 7.12e-49 160
Msa1100750 AT5G66300.1 54.887 133 57 1 2 131 6 138 8.19e-49 159
Msa1100750 AT5G08790.1 58.140 129 53 1 5 133 4 131 1.06e-48 158
Msa1100750 AT3G15500.1 55.814 129 57 0 5 133 11 139 1.48e-48 159
Msa1100750 AT5G62380.2 56.061 132 55 1 6 134 5 136 1.81e-48 160
Msa1100750 AT5G62380.1 56.061 132 55 1 6 134 5 136 1.81e-48 160
Msa1100750 AT1G77450.1 57.031 128 54 1 6 133 8 134 2.48e-48 157
Msa1100750 AT1G52890.1 56.589 129 56 0 5 133 11 139 2.74e-48 158
Msa1100750 AT3G17730.1 57.252 131 54 1 6 134 4 134 4.70e-48 155
Msa1100750 AT1G32770.1 54.286 140 61 1 3 139 11 150 7.28e-48 158
Msa1100750 AT1G01720.1 55.725 131 57 1 3 133 2 131 7.98e-48 156
Msa1100750 AT1G61110.1 56.391 133 57 1 8 139 16 148 2.05e-47 156
Msa1100750 AT2G27300.1 55.039 129 56 2 8 135 15 142 3.21e-47 156
Msa1100750 AT5G63790.1 57.364 129 54 1 5 133 47 174 4.68e-47 155
Msa1100750 AT3G04070.2 53.741 147 62 2 2 143 4 149 5.94e-47 155
Msa1100750 AT5G63790.2 57.364 129 54 1 5 133 57 184 5.98e-47 155
Msa1100750 AT1G65910.1 55.725 131 56 1 6 134 4 134 8.85e-47 160
Msa1100750 AT3G04070.1 53.741 147 62 2 2 143 4 149 9.85e-47 155
Msa1100750 AT3G49530.2 54.815 135 58 2 8 139 13 147 1.56e-46 156
Msa1100750 AT3G03200.1 58.015 131 53 1 6 134 4 134 1.59e-46 157
Msa1100750 AT3G49530.1 54.815 135 58 2 8 139 13 147 4.89e-46 156
Msa1100750 AT1G79580.3 55.970 134 55 2 5 134 14 147 5.38e-46 154
Msa1100750 AT1G79580.5 55.970 134 55 2 5 134 14 147 5.38e-46 154
Msa1100750 AT1G79580.4 55.970 134 55 2 5 134 14 147 5.38e-46 154
Msa1100750 AT1G79580.2 55.970 134 55 2 5 134 14 147 5.38e-46 154
Msa1100750 AT1G79580.1 55.970 134 55 2 5 134 14 147 5.38e-46 154
Msa1100750 AT5G17260.1 56.489 131 55 1 6 134 4 134 7.78e-46 155
Msa1100750 AT1G54330.1 57.692 130 53 1 6 133 4 133 8.02e-46 152
Msa1100750 AT5G39820.1 51.701 147 68 2 4 148 17 162 9.88e-46 152
Msa1100750 AT1G69490.1 56.349 126 55 0 8 133 9 134 2.51e-45 149
Msa1100750 AT4G27410.3 48.366 153 62 1 5 140 11 163 1.13e-44 149
Msa1100750 AT5G24590.2 56.250 128 53 2 8 132 13 140 1.42e-44 152
Msa1100750 AT5G04410.1 56.154 130 55 1 11 138 12 141 1.56e-44 154
Msa1100750 AT4G28530.1 49.315 146 56 2 7 134 9 154 2.39e-44 149
Msa1100750 AT5G46590.2 52.206 136 62 2 8 140 6 141 3.22e-44 147
Msa1100750 AT3G10480.2 59.200 125 49 1 11 133 30 154 4.05e-44 150
Msa1100750 AT3G10490.1 57.600 125 51 1 11 133 30 154 4.09e-44 145
Msa1100750 AT3G10480.1 59.200 125 49 1 11 133 30 154 4.17e-44 150
Msa1100750 AT5G46590.1 52.206 136 62 2 8 140 6 141 4.33e-44 147
Msa1100750 AT3G10500.1 54.615 130 57 1 11 138 12 141 4.43e-44 152
Msa1100750 AT1G26870.1 54.962 131 56 2 4 132 13 142 6.09e-44 149
Msa1100750 AT2G33480.1 54.688 128 55 1 6 133 13 137 6.86e-44 145
Msa1100750 AT2G33480.2 54.688 128 55 1 6 133 13 137 7.66e-44 145
Msa1100750 AT5G13180.1 51.111 135 61 2 1 133 7 138 1.74e-43 144
Msa1100750 AT3G15510.1 55.738 122 52 1 14 133 23 144 2.28e-43 147
Msa1100750 AT3G10490.2 57.600 125 51 1 11 133 30 154 9.12e-43 147
Msa1100750 AT5G22290.1 49.254 134 66 2 8 140 22 154 2.10e-42 144
Msa1100750 AT2G43000.1 47.692 130 68 0 11 140 21 150 5.94e-42 141
Msa1100750 AT3G44290.2 50.758 132 63 2 8 138 15 145 1.27e-41 139
Msa1100750 AT2G02450.1 51.128 133 64 1 11 142 54 186 1.43e-41 142
Msa1100750 AT2G02450.2 51.128 133 64 1 11 142 54 186 1.83e-41 143
Msa1100750 AT4G17980.1 53.077 130 57 2 8 133 6 135 2.43e-41 139
Msa1100750 AT4G17980.2 53.077 130 57 2 8 133 6 135 8.17e-41 138
Msa1100750 AT3G44290.1 50.758 132 63 2 8 138 15 145 1.47e-40 139
Msa1100750 AT5G09330.5 46.377 138 72 1 5 140 3 140 2.76e-40 141
Msa1100750 AT5G09330.2 46.377 138 72 1 5 140 3 140 2.76e-40 141
Msa1100750 AT5G09330.4 46.377 138 72 1 5 140 3 140 2.76e-40 141
Msa1100750 AT5G09330.3 46.377 138 72 1 5 140 3 140 2.76e-40 141
Msa1100750 AT5G09330.1 46.377 138 72 1 5 140 3 140 2.76e-40 141
Msa1100750 AT1G32510.1 48.276 145 66 2 8 143 6 150 1.57e-39 135
Msa1100750 AT5G64060.1 44.928 138 74 1 5 140 3 140 4.28e-39 135
Msa1100750 AT1G52880.1 53.543 127 55 1 14 136 23 149 9.84e-39 134
Msa1100750 AT1G34190.1 49.254 134 66 1 11 142 19 152 1.35e-38 137
Msa1100750 AT3G10480.3 47.468 158 48 1 11 133 30 187 2.16e-38 137
Msa1100750 AT1G34180.3 49.254 134 66 1 11 142 19 152 5.39e-38 134
Msa1100750 AT1G34180.1 49.254 134 66 1 11 142 19 152 1.44e-37 135
Msa1100750 AT2G17040.1 47.287 129 65 1 11 136 9 137 1.64e-36 127
Msa1100750 AT1G34180.4 45.205 146 66 1 11 142 19 164 3.64e-36 130
Msa1100750 AT1G34180.2 45.205 146 66 1 11 142 19 164 8.36e-36 130
Msa1100750 AT3G12910.1 48.175 137 64 4 2 133 16 150 1.59e-35 125
Msa1100750 AT3G12977.2 61.628 86 33 0 53 138 10 95 8.18e-35 121
Msa1100750 AT1G56010.1 59.375 96 34 1 56 151 1 91 1.53e-34 121
Msa1100750 AT4G10350.2 67.059 85 25 1 53 134 7 91 1.03e-33 120
Msa1100750 AT1G32870.2 51.538 130 59 2 11 138 13 140 1.39e-33 124
Msa1100750 AT1G32870.3 51.538 130 59 2 11 138 49 176 1.64e-33 124
Msa1100750 AT1G32870.1 52.800 125 55 2 11 133 13 135 1.67e-33 123
Msa1100750 AT5G04395.1 44.138 145 65 2 8 136 28 172 7.09e-32 112
Msa1100750 AT2G33480.3 63.014 73 27 0 61 133 8 80 2.35e-28 104
Msa1100750 AT4G28530.2 46.296 108 42 1 7 98 9 116 4.68e-28 106
Msa1100750 AT4G01550.1 44.776 134 68 4 6 133 2 135 2.69e-27 105
Msa1100750 AT5G22380.1 41.860 129 68 4 10 131 7 135 7.84e-27 101
Msa1100750 AT1G02230.1 45.385 130 61 6 9 131 4 130 5.94e-26 101
Msa1100750 AT3G44350.2 40.541 148 80 6 10 149 7 154 6.05e-26 99.0
Msa1100750 AT3G44350.1 40.876 137 74 5 10 139 7 143 6.47e-26 96.7
Msa1100750 AT3G04420.2 40.157 127 72 2 9 131 4 130 1.58e-25 99.0
Msa1100750 AT3G04420.1 40.157 127 72 2 9 131 4 130 2.25e-25 99.4
Msa1100750 AT4G01520.1 40.000 135 74 5 6 133 2 136 2.71e-25 98.6
Msa1100750 AT4G01540.4 41.221 131 70 5 10 133 6 136 1.76e-24 97.8
Msa1100750 AT4G01540.2 41.221 131 70 5 10 133 6 136 2.32e-24 97.8
Msa1100750 AT4G01540.1 41.221 131 70 5 10 133 6 136 4.08e-24 97.4
Msa1100750 AT4G01540.3 41.221 131 70 5 10 133 6 136 5.06e-24 96.7
Msa1100750 AT1G01010.1 36.842 152 70 6 10 147 5 144 2.48e-22 92.0
Msa1100750 AT3G10490.4 75.472 53 13 0 81 133 2 54 3.89e-22 90.9
Msa1100750 AT3G10490.3 75.472 53 13 0 81 133 2 54 3.89e-22 90.9
Msa1100750 AT5G64530.2 35.385 130 70 3 6 133 1 118 1.66e-21 85.5
Msa1100750 AT1G02220.1 37.795 127 72 3 9 131 4 127 3.51e-21 88.6
Msa1100750 AT5G64530.1 35.385 130 70 3 6 133 1 118 7.90e-21 84.3
Msa1100750 AT1G02250.1 38.462 130 70 4 9 131 4 130 1.19e-20 87.0
Msa1100750 AT2G18060.2 66.667 51 17 0 86 136 2 52 1.02e-19 83.2
Msa1100750 AT5G22290.2 59.259 54 22 0 87 140 2 55 1.39e-18 79.7
Msa1100750 AT3G56530.1 31.618 136 90 2 4 136 48 183 1.89e-18 80.5
Msa1100750 AT2G43000.2 47.222 72 38 0 69 140 1 72 2.33e-18 78.2
Msa1100750 AT5G14000.2 33.333 135 86 2 3 135 10 142 8.37e-18 75.9
Msa1100750 AT5G14000.1 33.333 135 86 2 3 135 10 142 5.98e-17 74.7
Msa1100750 AT3G55210.1 31.250 144 85 3 8 137 11 154 1.61e-16 74.7
Msa1100750 AT3G04430.1 36.364 132 70 4 14 132 6 136 1.33e-15 70.9
Msa1100750 AT5G50820.1 30.464 151 89 5 1 145 10 150 2.10e-15 70.5
Msa1100750 AT4G28500.1 33.333 144 76 5 8 133 59 200 1.06e-12 64.3
Msa1100750 AT1G28470.1 30.986 142 81 4 8 133 77 217 4.46e-12 62.8

Find 41 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAAGGGAAATTCATTAAT+TGG 0.105364 7_3:-31108232 Msa1100750:CDS
TTATTTAGAGATGGCTAAAA+TGG 0.245081 7_3:-31108371 Msa1100750:intron
GGTCAAATTTCCTGTTGGTT+GGG 0.351990 7_3:-31109368 Msa1100750:CDS
ACAAGGGAAATTCATTAATT+GGG 0.364746 7_3:-31108231 Msa1100750:CDS
GAGCTACTAATGCTGGCTAT+TGG 0.387868 7_3:-31108282 Msa1100750:CDS
GCCAGCATTAGTAGCTCTAT+TGG 0.388516 7_3:+31108288 None:intergenic
GCTGGCTATTGGAAAGCAAC+GGG 0.412908 7_3:-31108271 Msa1100750:CDS
TATTGGTCCTTTGACCAGTT+GGG 0.417126 7_3:+31108305 None:intergenic
AAATCAATACCTTGTTAAGA+AGG 0.419367 7_3:-31109317 Msa1100750:CDS
GTCAAATTTCCTGTTGGTTG+GGG 0.422199 7_3:-31109367 Msa1100750:CDS
TTTATAAGCTCTTCATCGGT+TGG 0.438123 7_3:+31109337 None:intergenic
CTATTGGTCCTTTGACCAGT+TGG 0.441493 7_3:+31108304 None:intergenic
GGAAAGAATCCCCAACCAAC+AGG 0.474042 7_3:+31109358 None:intergenic
AGGTCAAATTTCCTGTTGGT+TGG 0.481996 7_3:-31109369 Msa1100750:CDS
TATTTAGAGATGGCTAAAAT+GGG 0.486414 7_3:-31108370 Msa1100750:intron
ACCAATAGAGCTACTAATGC+TGG 0.495849 7_3:-31108289 Msa1100750:CDS
TTGATTTATAAGCTCTTCAT+CGG 0.497039 7_3:+31109333 None:intergenic
TTACCATTCCATGCGTGGAT+AGG 0.529914 7_3:+31108083 None:intergenic
GAAAAGGTCAAATTTCCTGT+TGG 0.532681 7_3:-31109373 Msa1100750:CDS
AGGGACAGAAAATACCCAAC+TGG 0.538414 7_3:-31108319 Msa1100750:CDS
TGCTGGCTATTGGAAAGCAA+CGG 0.539232 7_3:-31108272 Msa1100750:CDS
TGCGTGGATAGGTTGTGCTC+AGG 0.549718 7_3:+31108094 None:intergenic
CAACCTATCCACGCATGGAA+TGG 0.557142 7_3:-31108086 Msa1100750:intron
AGAGTGAGTTTCCCTCCAAT+CGG 0.564192 7_3:+31108134 None:intergenic
AATTCACCTGGCAAATCCCA+TGG 0.572720 7_3:+31109235 None:intergenic
CAATATTACCATTCCATGCG+TGG 0.574955 7_3:+31108078 None:intergenic
GGTCATGCATGAATACCGAT+TGG 0.588791 7_3:-31108149 Msa1100750:CDS
CATGCATGAATACCGATTGG+AGG 0.592763 7_3:-31108146 Msa1100750:CDS
CTAAAATGGGAGAAACAGAA+TGG 0.594315 7_3:-31108357 Msa1100750:CDS
GAAAATACCCAACTGGTCAA+AGG 0.598845 7_3:-31108312 Msa1100750:CDS
GTATTCATGCATGACCCAGT+TGG 0.607268 7_3:+31108156 None:intergenic
ATGCATGAATACCGATTGGA+GGG 0.612532 7_3:-31108145 Msa1100750:CDS
TGTCATCAACCTTCTTAACA+AGG 0.615528 7_3:+31109308 None:intergenic
TGTGAACCATGGGATTTGCC+AGG 0.615720 7_3:-31109241 Msa1100750:intron
GAAAGACAAAGAGATTTACA+AGG 0.634963 7_3:-31108248 Msa1100750:CDS
GAGCACAACCTATCCACGCA+TGG 0.636675 7_3:-31108091 Msa1100750:CDS
TATGAATAAGTGTGAACCAT+GGG 0.641317 7_3:-31109251 Msa1100750:CDS
AAAGACAAAGAGATTTACAA+GGG 0.672892 7_3:-31108247 Msa1100750:CDS
ATATGAATAAGTGTGAACCA+TGG 0.681966 7_3:-31109252 Msa1100750:CDS
CTGGCTATTGGAAAGCAACG+GGG 0.700603 7_3:-31108270 Msa1100750:CDS
TACATAGGAAGAGCTCCGAG+CGG 0.756904 7_3:-31108187 Msa1100750:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAAAAGTTACTTTTATTA+TGG + chr7_3:31107741-31107760 None:intergenic 10.0%
!!! GTGAATTTAATGTTTTTTAT+AGG - chr7_3:31106270-31106289 Msa1100750:intron 15.0%
!! AAAAAGAAAGAAAAACAATT+TGG - chr7_3:31106735-31106754 Msa1100750:intron 15.0%
!! TAAAATAACTAAATTTAACC+CGG + chr7_3:31106997-31107016 None:intergenic 15.0%
!!! TTTTTTTCTTTATTTAGAGA+TGG - chr7_3:31107109-31107128 Msa1100750:intron 15.0%
!!! TATTTTTTTTTTCAAAAGCA+CGG + chr7_3:31107549-31107568 None:intergenic 15.0%
!!! AGTTTACTTTATTTAGAAAA+AGG + chr7_3:31107702-31107721 None:intergenic 15.0%
!!! TTACTTTAAAAGTTTTCTAA+AGG - chr7_3:31108792-31108811 Msa1100750:intron 15.0%
!! ATAAGTTTATAAATTGTACA+AGG + chr7_3:31108931-31108950 None:intergenic 15.0%
!! TAAAAATGGTATTTAGATAT+GGG + chr7_3:31109247-31109266 None:intergenic 15.0%
!! TTAAAAATGGTATTTAGATA+TGG + chr7_3:31109248-31109267 None:intergenic 15.0%
!! TAAAAAACATTAAATTCACC+TGG + chr7_3:31106269-31106288 None:intergenic 20.0%
!! ATGATATTATATTAGTAGTC+TGG - chr7_3:31106313-31106332 Msa1100750:intron 20.0%
!!! AAGAAAGCATAATTAAGTTA+TGG + chr7_3:31107088-31107107 None:intergenic 20.0%
!! AACATATCTTAGTAAATGTT+TGG + chr7_3:31107625-31107644 None:intergenic 20.0%
!! TTACAAACAAAATTTCATGT+TGG - chr7_3:31108493-31108512 Msa1100750:intron 20.0%
!!! AATTTATCTATTTCGTTTTG+TGG - chr7_3:31108533-31108552 Msa1100750:intron 20.0%
!! AGATAATACAAATATGTTCA+CGG - chr7_3:31108873-31108892 Msa1100750:intron 20.0%
!! AAACTCTCTATAATATCTAA+AGG - chr7_3:31109042-31109061 Msa1100750:intron 20.0%
!! AACTCTCTATAATATCTAAA+GGG - chr7_3:31109043-31109062 Msa1100750:intron 20.0%
!! ATATGTGTGTGTATTAAAAA+TGG + chr7_3:31109261-31109280 None:intergenic 20.0%
! TTGATTTATAAGCTCTTCAT+CGG + chr7_3:31106159-31106178 None:intergenic 25.0%
! AAATCAATACCTTGTTAAGA+AGG - chr7_3:31106172-31106191 Msa1100750:intron 25.0%
! ATTTGTCAAAAAAAAGTCCA+AGG + chr7_3:31106354-31106373 None:intergenic 25.0%
! TTTACAGTTGCAAAAAAGAA+AGG - chr7_3:31106410-31106429 Msa1100750:intron 25.0%
! CTTGATATTTCATCTTAATG+CGG + chr7_3:31106601-31106620 None:intergenic 25.0%
!!! CACATAATTTTAGTGTTCTT+TGG + chr7_3:31106695-31106714 None:intergenic 25.0%
! CAAAGAACACTAAAATTATG+TGG - chr7_3:31106693-31106712 Msa1100750:intron 25.0%
! TTACTCCTTAGATATATTGT+CGG - chr7_3:31106874-31106893 Msa1100750:intron 25.0%
! TTATTTAGAGATGGCTAAAA+TGG - chr7_3:31107118-31107137 Msa1100750:intron 25.0%
! TATTTAGAGATGGCTAAAAT+GGG - chr7_3:31107119-31107138 Msa1100750:intron 25.0%
! AAAGACAAAGAGATTTACAA+GGG - chr7_3:31107242-31107261 Msa1100750:intron 25.0%
! TACAAGGGAAATTCATTAAT+TGG - chr7_3:31107257-31107276 Msa1100750:intron 25.0%
! ACAAGGGAAATTCATTAATT+GGG - chr7_3:31107258-31107277 Msa1100750:intron 25.0%
! TAAGTTTGACGATGATAAAA+TGG + chr7_3:31107594-31107613 None:intergenic 25.0%
!! AGAAATCAGAAATAGTGTTT+TGG + chr7_3:31108114-31108133 None:intergenic 25.0%
! TTCTTACTCTTCAAAACAAA+TGG - chr7_3:31108234-31108253 Msa1100750:CDS 25.0%
! AAAATTCCAAAAGCTATCAT+TGG + chr7_3:31108470-31108489 None:intergenic 25.0%
!! TGTGGTATACATATTTTATC+AGG - chr7_3:31108551-31108570 Msa1100750:intron 25.0%
! AAGTAACTATCAATCTTTGT+CGG + chr7_3:31108732-31108751 None:intergenic 25.0%
!!! TTTTTTCGAAGAAAAGTATC+TGG - chr7_3:31108756-31108775 Msa1100750:intron 25.0%
! GTGAACATATTTGTATTATC+TGG + chr7_3:31108874-31108893 None:intergenic 25.0%
! TTTGAAAAAAAGTTGTCTCA+TGG + chr7_3:31109018-31109037 None:intergenic 25.0%
! ACTAGTTAAGTAGCTAAAAA+TGG + chr7_3:31109199-31109218 None:intergenic 25.0%
! TCATTTATACTATCCATTGT+TGG - chr7_3:31109354-31109373 Msa1100750:CDS 25.0%
ATATGAATAAGTGTGAACCA+TGG - chr7_3:31106237-31106256 Msa1100750:intron 30.0%
TATGAATAAGTGTGAACCAT+GGG - chr7_3:31106238-31106257 Msa1100750:intron 30.0%
! CATCAATTTTATAGATCTGC+AGG + chr7_3:31106511-31106530 None:intergenic 30.0%
CTGCAGATCTATAAAATTGA+TGG - chr7_3:31106509-31106528 Msa1100750:intron 30.0%
GAAAGAAAAACAATTTGGAG+AGG - chr7_3:31106740-31106759 Msa1100750:intron 30.0%
AGATACCGACAATATATCTA+AGG + chr7_3:31106882-31106901 None:intergenic 30.0%
ATATTGTCGGTATCTTACTT+TGG - chr7_3:31106887-31106906 Msa1100750:intron 30.0%
!!! AATGGTATTTTTTCTGTGTG+AGG - chr7_3:31107150-31107169 Msa1100750:intron 30.0%
!!! ATGGTATTTTTTCTGTGTGA+GGG - chr7_3:31107151-31107170 Msa1100750:intron 30.0%
GAAAGACAAAGAGATTTACA+AGG - chr7_3:31107241-31107260 Msa1100750:intron 30.0%
AATTGGGATGAAAAAAACAC+TGG - chr7_3:31107274-31107293 Msa1100750:intron 30.0%
!!! AAAACACTGGTTTTCTACAT+AGG - chr7_3:31107287-31107306 Msa1100750:intron 30.0%
ACGTAATTCTATCAAACACA+TGG + chr7_3:31107519-31107538 None:intergenic 30.0%
!!! AACCTTTTTTGTAGAGTGAA+TGG - chr7_3:31107936-31107955 Msa1100750:intron 30.0%
!!! ACCTTTTTTGTAGAGTGAAT+GGG - chr7_3:31107937-31107956 Msa1100750:intron 30.0%
! AATTCTGGAAAGAAAATGGA+TGG - chr7_3:31107986-31108005 Msa1100750:intron 30.0%
AAAATGGATGGTTCAAAACT+TGG - chr7_3:31107998-31108017 Msa1100750:intron 30.0%
AGAGATGCAATAGTATTTGA+TGG + chr7_3:31108049-31108068 None:intergenic 30.0%
!! TTTCTCTGTTTGATTTGGAT+TGG + chr7_3:31108158-31108177 None:intergenic 30.0%
! TTTGGTTTCTCTGTTTGATT+TGG + chr7_3:31108163-31108182 None:intergenic 30.0%
! ATGTTGTCATCTTGTGTTTT+TGG + chr7_3:31108181-31108200 None:intergenic 30.0%
ATGGAAATGACATGTTTCAA+AGG - chr7_3:31108398-31108417 Msa1100750:intron 30.0%
TCATGAGATTGAACAAAACA+AGG - chr7_3:31108950-31108969 Msa1100750:intron 30.0%
ATTGAACAAAACAAGGTGTA+TGG - chr7_3:31108957-31108976 Msa1100750:intron 30.0%
AAACAAAATCACACCAACAA+TGG + chr7_3:31109370-31109389 None:intergenic 30.0%
GAAAAGGTCAAATTTCCTGT+TGG - chr7_3:31106116-31106135 Msa1100750:intron 35.0%
TTTATAAGCTCTTCATCGGT+TGG + chr7_3:31106155-31106174 None:intergenic 35.0%
TGTCATCAACCTTCTTAACA+AGG + chr7_3:31106184-31106203 None:intergenic 35.0%
CCAGATCTAATCAATGACTT+TGG + chr7_3:31106537-31106556 None:intergenic 35.0%
! CCAAAGTCATTGATTAGATC+TGG - chr7_3:31106534-31106553 Msa1100750:intron 35.0%
ATGCGGTGTATATTTGATTC+AGG + chr7_3:31106584-31106603 None:intergenic 35.0%
! ACAATTTGGAGAGGTGATTT+TGG - chr7_3:31106749-31106768 Msa1100750:intron 35.0%
! CAATTTGGAGAGGTGATTTT+GGG - chr7_3:31106750-31106769 Msa1100750:intron 35.0%
TTCCTAGATCTACCAATGAA+GGG + chr7_3:31106796-31106815 None:intergenic 35.0%
TTTCCTAGATCTACCAATGA+AGG + chr7_3:31106797-31106816 None:intergenic 35.0%
AAAAGAAAAGTTGTGACGAC+TGG - chr7_3:31106821-31106840 Msa1100750:intron 35.0%
AAAGAAAAGTTGTGACGACT+GGG - chr7_3:31106822-31106841 Msa1100750:intron 35.0%
CTAAAATGGGAGAAACAGAA+TGG - chr7_3:31107132-31107151 Msa1100750:intron 35.0%
ACCCATTCACTCTACAAAAA+AGG + chr7_3:31107941-31107960 None:intergenic 35.0%
! GCGTAATTCTGGAAAGAAAA+TGG - chr7_3:31107982-31108001 Msa1100750:intron 35.0%
ATCTCTATTGTCTCCATTGT+TGG - chr7_3:31108063-31108082 Msa1100750:intron 35.0%
TATGGAGAAGAATCCAACAA+TGG + chr7_3:31108079-31108098 None:intergenic 35.0%
TTGGATTCTTCTCCATACAA+TGG - chr7_3:31108082-31108101 Msa1100750:intron 35.0%
!! TTTTGGTCTTCACCATTGTA+TGG + chr7_3:31108097-31108116 None:intergenic 35.0%
! CAATTGTTGCTTCAGCTAAA+GGG + chr7_3:31108267-31108286 None:intergenic 35.0%
! TTCTCCCAAGAGTTTTCTTT+TGG - chr7_3:31108334-31108353 Msa1100750:CDS 35.0%
! TCTCCCAAGAGTTTTCTTTT+GGG - chr7_3:31108335-31108354 Msa1100750:CDS 35.0%
TCTCCCAAAAGAAAACTCTT+GGG + chr7_3:31108341-31108360 None:intergenic 35.0%
GATATCTCATCTGTGGTATA+TGG - chr7_3:31108379-31108398 Msa1100750:intron 35.0%
GAAATGACATGTTTCAAAGG+TGG - chr7_3:31108401-31108420 Msa1100750:intron 35.0%
AGGTCAAATTTCCTGTTGGT+TGG - chr7_3:31106120-31106139 Msa1100750:intron 40.0%
! GGTCAAATTTCCTGTTGGTT+GGG - chr7_3:31106121-31106140 Msa1100750:intron 40.0%
! GTCAAATTTCCTGTTGGTTG+GGG - chr7_3:31106122-31106141 Msa1100750:intron 40.0%
GGATTTGAAAAACTACGCCT+TGG - chr7_3:31106334-31106353 Msa1100750:intron 40.0%
! TTTTATAGATCTGCAGGCGT+CGG + chr7_3:31106505-31106524 None:intergenic 40.0%
! GTCATTGATTAGATCTGGAC+TGG - chr7_3:31106539-31106558 Msa1100750:intron 40.0%
AAACCTAAACCACCCTTCAT+TGG - chr7_3:31106781-31106800 Msa1100750:intron 40.0%
AAGAAAAGTTGTGACGACTG+GGG - chr7_3:31106823-31106842 Msa1100750:intron 40.0%
TTGTCGGTATCTTACTTTGG+TGG - chr7_3:31106890-31106909 Msa1100750:intron 40.0%
GACACATTATGATGTGTCAG+TGG + chr7_3:31106944-31106963 None:intergenic 40.0%
CTGACACATCATAATGTGTC+AGG - chr7_3:31106944-31106963 Msa1100750:intron 40.0%
TGCACCAACATGACACTAAT+AGG - chr7_3:31106971-31106990 Msa1100750:intron 40.0%
GAAAATACCCAACTGGTCAA+AGG - chr7_3:31107177-31107196 Msa1100750:intron 40.0%
TATTGGTCCTTTGACCAGTT+GGG + chr7_3:31107187-31107206 None:intergenic 40.0%
ACCAATAGAGCTACTAATGC+TGG - chr7_3:31107200-31107219 Msa1100750:intron 40.0%
! ATGCATGAATACCGATTGGA+GGG - chr7_3:31107344-31107363 Msa1100750:intron 40.0%
CAATATTACCATTCCATGCG+TGG + chr7_3:31107414-31107433 None:intergenic 40.0%
! GTCTTTGAGAAGCGTAATTC+TGG - chr7_3:31107971-31107990 Msa1100750:intron 40.0%
TGGATGGTTCAAAACTTGGA+AGG - chr7_3:31108002-31108021 Msa1100750:intron 40.0%
! ATTTGATGGTCCTTCTCTAG+AGG + chr7_3:31108035-31108054 None:intergenic 40.0%
! GCAATTGTTGCTTCAGCTAA+AGG + chr7_3:31108268-31108287 None:intergenic 40.0%
CTCTCCCAAAAGAAAACTCT+TGG + chr7_3:31108342-31108361 None:intergenic 40.0%
TGATGCTGATATCTCATCTG+TGG - chr7_3:31108372-31108391 Msa1100750:intron 40.0%
ACATGTTTCAAAGGTGGTCT+GGG - chr7_3:31108407-31108426 Msa1100750:intron 40.0%
AATTCCTTAACTAGTGTCCC+CGG + chr7_3:31109086-31109105 None:intergenic 40.0%
AATTCACCTGGCAAATCCCA+TGG + chr7_3:31106257-31106276 None:intergenic 45.0%
CTACCAATGAAGGGTGGTTT+AGG + chr7_3:31106787-31106806 None:intergenic 45.0%
CTAGATCTACCAATGAAGGG+TGG + chr7_3:31106793-31106812 None:intergenic 45.0%
CACCCTTCATTGGTAGATCT+AGG - chr7_3:31106791-31106810 Msa1100750:intron 45.0%
CCAACATGACACTAATAGGC+CGG - chr7_3:31106975-31106994 Msa1100750:intron 45.0%
CAACATGACACTAATAGGCC+GGG - chr7_3:31106976-31106995 Msa1100750:intron 45.0%
AGGGACAGAAAATACCCAAC+TGG - chr7_3:31107170-31107189 Msa1100750:intron 45.0%
CTATTGGTCCTTTGACCAGT+TGG + chr7_3:31107188-31107207 None:intergenic 45.0%
! GCCAGCATTAGTAGCTCTAT+TGG + chr7_3:31107204-31107223 None:intergenic 45.0%
! GAGCTACTAATGCTGGCTAT+TGG - chr7_3:31107207-31107226 Msa1100750:intron 45.0%
! TGCTGGCTATTGGAAAGCAA+CGG - chr7_3:31107217-31107236 Msa1100750:intron 45.0%
!!! CAGTTGGTTTTTTCACCGCT+CGG + chr7_3:31107320-31107339 None:intergenic 45.0%
GAGCGGTGAAAAAACCAACT+GGG - chr7_3:31107319-31107338 Msa1100750:intron 45.0%
GTATTCATGCATGACCCAGT+TGG + chr7_3:31107336-31107355 None:intergenic 45.0%
GGTCATGCATGAATACCGAT+TGG - chr7_3:31107340-31107359 Msa1100750:intron 45.0%
! CATGCATGAATACCGATTGG+AGG - chr7_3:31107343-31107362 Msa1100750:intron 45.0%
AGAGTGAGTTTCCCTCCAAT+CGG + chr7_3:31107358-31107377 None:intergenic 45.0%
TTACCATTCCATGCGTGGAT+AGG + chr7_3:31107409-31107428 None:intergenic 45.0%
! AGGTCTAACTCCTCTAGAGA+AGG - chr7_3:31108022-31108041 Msa1100750:intron 45.0%
TGATTCCAACCAAACCTCAG+TGG - chr7_3:31108288-31108307 Msa1100750:CDS 45.0%
GACATGTTTCAAAGGTGGTC+TGG - chr7_3:31108406-31108425 Msa1100750:intron 45.0%
GGTTTCTCACCATCTTCTAC+TGG - chr7_3:31108436-31108455 Msa1100750:intron 45.0%
ACCATCTTCTACTGGACTTG+CGG - chr7_3:31108444-31108463 Msa1100750:intron 45.0%
! TTGCGGCCAATGATAGCTTT+TGG - chr7_3:31108461-31108480 Msa1100750:intron 45.0%
GGAAATGTTAACCAGTGCTC+CGG - chr7_3:31109064-31109083 Msa1100750:intron 45.0%
GAAATGTTAACCAGTGCTCC+GGG - chr7_3:31109065-31109084 Msa1100750:intron 45.0%
AAATGTTAACCAGTGCTCCG+GGG - chr7_3:31109066-31109085 Msa1100750:intron 45.0%
TAGCTACTTAACTAGTGCCC+TGG - chr7_3:31109203-31109222 Msa1100750:intron 45.0%
!! TAATTTATTAATATTTACAT+TGG - chr7_3:31109309-31109328 Msa1100750:CDS 5.0%
GGAAAGAATCCCCAACCAAC+AGG + chr7_3:31106134-31106153 None:intergenic 50.0%
TGTGAACCATGGGATTTGCC+AGG - chr7_3:31106248-31106267 Msa1100750:intron 50.0%
AAGTTGTGACGACTGGGGTT+TGG - chr7_3:31106828-31106847 Msa1100750:intron 50.0%
TTTGGCAAGGAGAAAGCGAG+TGG - chr7_3:31106846-31106865 Msa1100750:intron 50.0%
CCGGCCTATTAGTGTCATGT+TGG + chr7_3:31106978-31106997 None:intergenic 50.0%
GCTGGCTATTGGAAAGCAAC+GGG - chr7_3:31107218-31107237 Msa1100750:intron 50.0%
CTGGCTATTGGAAAGCAACG+GGG - chr7_3:31107219-31107238 Msa1100750:intron 50.0%
TACATAGGAAGAGCTCCGAG+CGG - chr7_3:31107302-31107321 Msa1100750:intron 50.0%
CGAGCGGTGAAAAAACCAAC+TGG - chr7_3:31107318-31107337 Msa1100750:intron 50.0%
CAACCTATCCACGCATGGAA+TGG - chr7_3:31107403-31107422 Msa1100750:intron 50.0%
TCCAACCAAACCTCAGTGGT+CGG - chr7_3:31108292-31108311 Msa1100750:CDS 50.0%
AATTCCCGACCACTGAGGTT+TGG + chr7_3:31108300-31108319 None:intergenic 50.0%
TGATGAATTCCCGACCACTG+AGG + chr7_3:31108305-31108324 None:intergenic 50.0%
CAAAGGTGGTCTGGGAATCA+AGG - chr7_3:31108415-31108434 Msa1100750:intron 50.0%
CTACTTAACTAGTGCCCTGG+AGG - chr7_3:31109206-31109225 Msa1100750:intron 50.0%
CATGTTAACCAGTGCCTCCA+GGG + chr7_3:31109223-31109242 None:intergenic 50.0%
TCATGTTAACCAGTGCCTCC+AGG + chr7_3:31109224-31109243 None:intergenic 50.0%
TGCGTGGATAGGTTGTGCTC+AGG + chr7_3:31107398-31107417 None:intergenic 55.0%
GAGCACAACCTATCCACGCA+TGG - chr7_3:31107398-31107417 Msa1100750:intron 55.0%
CCAACCAAACCTCAGTGGTC+GGG - chr7_3:31108293-31108312 Msa1100750:CDS 55.0%
GCCGCAAGTCCAGTAGAAGA+TGG + chr7_3:31108448-31108467 None:intergenic 55.0%
TGCTCCGGGGACACTAGTTA+AGG - chr7_3:31109079-31109098 Msa1100750:intron 55.0%
GTGACGACTGGGGTTTGGCA+AGG - chr7_3:31106833-31106852 Msa1100750:intron 60.0%
! CCCGACCACTGAGGTTTGGT+TGG + chr7_3:31108296-31108315 None:intergenic 60.0%
AACTAGTGTCCCCGGAGCAC+TGG + chr7_3:31109078-31109097 None:intergenic 60.0%
! AACTAGTGCCCTGGAGGCAC+TGG - chr7_3:31109212-31109231 Msa1100750:intron 60.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 31106107 31109404 31106107 ID=Msa1100750;Name=Msa1100750
chr7_3 mRNA 31106107 31109404 31106107 ID=Msa1100750-mRNA-1;Parent=Msa1100750;Name=Msa1100750-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|0.66|1|1|3|0|156
chr7_3 exon 31109242 31109404 31109242 ID=Msa1100750-mRNA-1:exon:6605;Parent=Msa1100750-mRNA-1
chr7_3 exon 31108087 31108385 31108087 ID=Msa1100750-mRNA-1:exon:6604;Parent=Msa1100750-mRNA-1
chr7_3 exon 31106107 31106115 31106107 ID=Msa1100750-mRNA-1:exon:6603;Parent=Msa1100750-mRNA-1
chr7_3 CDS 31109242 31109404 31109242 ID=Msa1100750-mRNA-1:cds;Parent=Msa1100750-mRNA-1
chr7_3 CDS 31108087 31108385 31108087 ID=Msa1100750-mRNA-1:cds;Parent=Msa1100750-mRNA-1
chr7_3 CDS 31106107 31106115 31106107 ID=Msa1100750-mRNA-1:cds;Parent=Msa1100750-mRNA-1
Gene Sequence

>Msa1100750

ATGGAAAATGAAAAGGTCAAATTTCCTGTTGGTTGGGGATTCTTTCCAACCGATGAAGAGCTTATAAATCAATACCTTGTTAAGAAGGTTGATGACAATAGCTTCTGTGCTATAGCTATTGCTGAAGTTGATATGAATAAGTGTGAACCATGGGATTTGCCAGAGATGGCTAAAATGGGAGAAACAGAATGGTATTTTTTCTGTGTGAGGGACAGAAAATACCCAACTGGTCAAAGGACCAATAGAGCTACTAATGCTGGCTATTGGAAAGCAACGGGGAAAGACAAAGAGATTTACAAGGGAAATTCATTAATTGGGATGAAAAAAACACTGGTTTTCTACATAGGAAGAGCTCCGAGCGGTGAAAAAACCAACTGGGTCATGCATGAATACCGATTGGAGGGAAACTCACTCTCTGAGTACAAACTTTTTCCTGAGCACAACCTATCCACGCATGGAATGAAAATCTGA
Protein sequence

>Msa1100750

MENEKVKFPVGWGFFPTDEELINQYLVKKVDDNSFCAIAIAEVDMNKCEPWDLPEMAKMGETEWYFFCVRDRKYPTGQRTNRATNAGYWKATGKDKEIYKGNSLIGMKKTLVFYIGRAPSGEKTNWVMHEYRLEGNSLSEYKLFPEHNLSTHGMKI*