AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1100840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1100840 MtrunA17_Chr7g0217711 80.519 154 5 1 1 129 12 165 3.21e-85 246
Msa1100840 MtrunA17_Chr7g0217721 78.750 160 3 2 1 129 12 171 1.52e-82 245
Msa1100840 MtrunA17_Chr4g0060931 61.972 142 28 2 2 118 11 151 7.11e-52 167
Msa1100840 MtrunA17_Chr6g0453451 62.121 132 25 1 3 109 15 146 5.59e-50 161
Msa1100840 MtrunA17_Chr3g0091921 59.859 142 31 2 2 118 10 150 2.64e-49 159
Msa1100840 MtrunA17_Chr2g0316971 64.567 127 18 2 11 110 26 152 8.95e-47 154
Msa1100840 MtrunA17_Chr3g0113031 83.333 84 8 1 46 129 3 80 2.30e-46 150
Msa1100840 MtrunA17_Chr6g0461661 56.643 143 34 3 3 118 13 154 3.06e-46 153
Msa1100840 MtrunA17_Chr6g0484441 59.055 127 27 1 8 109 5 131 4.97e-46 151
Msa1100840 MtrunA17_Chr3g0113001 80.723 83 10 1 47 129 29 105 3.89e-43 143
Msa1100840 MtrunA17_Chr7g0253011 53.425 146 38 4 2 118 11 155 1.21e-42 144
Msa1100840 MtrunA17_Chr3g0139331 53.285 137 37 2 8 117 11 147 2.43e-42 142
Msa1100840 MtrunA17_Chr1g0147421 53.623 138 36 3 8 117 27 164 1.34e-40 138
Msa1100840 MtrunA17_Chr3g0144271 54.348 138 35 3 8 117 23 160 1.05e-39 137
Msa1100840 MtrunA17_Chr4g0056541 51.163 129 35 1 11 111 10 138 1.24e-37 130
Msa1100840 MtrunA17_Chr4g0018391 50.000 130 37 1 10 111 9 138 3.30e-37 129
Msa1100840 MtrunA17_Chr5g0405211 46.763 139 46 1 1 111 1 139 1.80e-36 127
Msa1100840 MtrunA17_Chr8g0372121 49.606 127 36 1 11 109 9 135 5.11e-36 125
Msa1100840 MtrunA17_Chr4g0017921 52.344 128 33 1 10 109 10 137 6.86e-36 125
Msa1100840 MtrunA17_Chr5g0398971 50.000 130 36 2 11 111 10 139 6.96e-36 125
Msa1100840 MtrunA17_Chr8g0346001 47.222 144 48 1 3 118 10 153 8.11e-36 127
Msa1100840 MtrunA17_Chr2g0309331 51.538 130 34 2 11 111 13 142 1.25e-35 125
Msa1100840 MtrunA17_Chr8g0359921 46.043 139 49 2 5 118 11 148 3.78e-35 123
Msa1100840 MtrunA17_Chr2g0312321 49.242 132 38 3 5 110 8 136 6.93e-35 122
Msa1100840 MtrunA17_Chr7g0214071 48.092 131 44 2 2 108 9 139 2.53e-34 119
Msa1100840 MtrunA17_Chr6g0481091 46.565 131 43 1 6 109 4 134 4.70e-34 118
Msa1100840 MtrunA17_Chr3g0128111 50.000 124 35 1 11 107 45 168 9.02e-34 117
Msa1100840 MtrunA17_Chr5g0428991 48.438 128 39 1 7 107 24 151 1.33e-33 122
Msa1100840 MtrunA17_Chr3g0128151 50.806 124 34 1 11 107 25 148 1.57e-33 122
Msa1100840 MtrunA17_Chr2g0318081 43.609 133 50 1 5 112 13 145 3.68e-33 118
Msa1100840 MtrunA17_Chr1g0200561 46.825 126 39 1 10 107 21 146 7.96e-33 117
Msa1100840 MtrunA17_Chr2g0309891 45.000 140 46 2 6 114 4 143 2.03e-32 116
Msa1100840 MtrunA17_Chr4g0042561 45.985 137 47 2 7 116 8 144 6.14e-32 114
Msa1100840 MtrunA17_Chr5g0417791 45.802 131 46 1 6 111 1 131 8.26e-32 113
Msa1100840 MtrunA17_Chr5g0433781 45.038 131 45 1 6 109 4 134 1.18e-31 117
Msa1100840 MtrunA17_Chr3g0109821 44.275 131 46 1 6 109 4 134 4.05e-31 116
Msa1100840 MtrunA17_Chr3g0130731 44.186 129 46 2 5 108 4 131 4.39e-31 112
Msa1100840 MtrunA17_Chr3g0124761 42.636 129 48 2 5 108 4 131 4.65e-31 112
Msa1100840 MtrunA17_Chr2g0318101 42.963 135 50 2 4 111 11 145 1.49e-30 112
Msa1100840 MtrunA17_Chr8g0384721 42.254 142 52 3 6 118 5 145 1.52e-30 110
Msa1100840 MtrunA17_Chr7g0263931 42.143 140 54 2 5 117 8 147 2.17e-30 110
Msa1100840 MtrunA17_Chr8g0364791 42.222 135 51 1 7 114 5 139 4.42e-30 112
Msa1100840 MtrunA17_Chr1g0183741 42.857 126 45 2 11 109 13 138 5.60e-30 108
Msa1100840 MtrunA17_Chr4g0047841 42.963 135 46 3 10 117 17 147 9.35e-30 109
Msa1100840 MtrunA17_Chr4g0054791 42.963 135 47 2 4 108 2 136 3.33e-29 107
Msa1100840 MtrunA17_Chr7g0261411 42.520 127 46 2 10 109 12 138 7.83e-29 106
Msa1100840 MtrunA17_Chr5g0400461 43.609 133 41 2 10 108 8 140 8.26e-29 107
Msa1100840 MtrunA17_Chr1g0197361 44.361 133 46 2 11 115 11 143 9.36e-29 109
Msa1100840 MtrunA17_Chr3g0092671 44.361 133 46 2 11 115 8 140 1.54e-28 108
Msa1100840 MtrunA17_Chr7g0252971 40.690 145 52 2 1 111 1 145 1.57e-28 106
Msa1100840 MtrunA17_Chr3g0130101 40.741 135 53 1 11 118 10 144 4.34e-28 105
Msa1100840 MtrunA17_Chr1g0201021 41.538 130 49 1 11 113 22 151 9.33e-28 106
Msa1100840 MtrunA17_Chr8g0384201 40.000 135 54 1 7 114 5 139 1.04e-27 105
Msa1100840 MtrunA17_Chr2g0326361 42.969 128 46 2 8 108 14 141 1.12e-27 103
Msa1100840 MtrunA17_Chr1g0197351 45.968 124 40 1 10 106 44 167 1.87e-27 105
Msa1100840 MtrunA17_Chr2g0311661 39.216 153 58 3 1 118 9 161 1.35e-26 100
Msa1100840 MtrunA17_Chr2g0311651 39.855 138 53 2 11 118 25 162 5.34e-26 99.0
Msa1100840 MtrunA17_Chr8g0361731 41.600 125 46 2 11 108 17 141 1.72e-25 99.0
Msa1100840 MtrunA17_Chr5g0417001 42.400 125 45 2 11 108 17 141 2.44e-25 98.6
Msa1100840 MtrunA17_Chr3g0113011 84.000 50 8 0 1 50 12 61 3.01e-25 90.9
Msa1100840 MtrunA17_Chr3g0113041 86.000 50 7 0 1 50 12 61 6.25e-25 90.1
Msa1100840 MtrunA17_Chr6g0453131 41.935 124 46 2 11 108 18 141 8.40e-25 97.1
Msa1100840 MtrunA17_Chr8g0385991 38.346 133 57 2 1 108 7 139 2.36e-24 93.2
Msa1100840 MtrunA17_Chr4g0076731 41.600 125 47 2 10 108 56 180 5.37e-24 95.1
Msa1100840 MtrunA17_Chr8g0345691 44.882 127 39 5 10 106 14 139 3.89e-23 92.8
Msa1100840 MtrunA17_Chr4g0038751 41.429 140 53 5 1 112 9 147 6.81e-23 90.9
Msa1100840 MtrunA17_Chr2g0321741 53.030 66 31 0 47 112 57 122 7.59e-23 91.3
Msa1100840 MtrunA17_Chr8g0345671 45.669 127 38 5 10 106 13 138 1.16e-22 91.3
Msa1100840 MtrunA17_Chr5g0442771 37.143 140 60 2 11 122 21 160 3.19e-22 89.0
Msa1100840 MtrunA17_Chr2g0321631 37.692 130 49 3 10 107 6 135 1.42e-21 86.3
Msa1100840 MtrunA17_Chr7g0243371 42.045 88 41 2 34 111 7 94 7.71e-21 81.3
Msa1100840 MtrunA17_Chr3g0131911 37.037 135 58 2 1 108 7 141 1.94e-20 83.2
Msa1100840 MtrunA17_Chr4g0026141 38.168 131 50 3 8 107 5 135 7.10e-20 82.0
Msa1100840 MtrunA17_Chr4g0050701 38.136 118 54 3 10 108 13 130 7.34e-20 80.5
Msa1100840 MtrunA17_Chr7g0266701 35.659 129 51 3 11 107 7 135 7.33e-18 76.6
Msa1100840 MtrunA17_Chr8g0345711 39.370 127 46 4 10 106 14 139 2.21e-17 73.6
Msa1100840 MtrunA17_Chr8g0345721 30.769 156 48 5 10 106 37 191 2.86e-13 63.5
Msa1100840 MtrunA17_Chr8g0345741 43.902 82 39 4 27 106 42 118 5.91e-12 59.3
Msa1100840 MtrunA17_Chr8g0384351 34.146 123 56 4 6 111 8 122 1.74e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1100840 AT5G61430.1 61.268 142 29 2 2 118 10 150 8.27e-52 167
Msa1100840 AT5G07680.1 59.155 142 32 2 2 118 11 151 5.48e-50 162
Msa1100840 AT5G07680.2 61.029 136 27 2 8 118 3 137 8.12e-49 158
Msa1100840 AT3G29035.1 60.448 134 28 1 2 110 18 151 8.94e-49 158
Msa1100840 AT5G39610.1 58.955 134 30 1 2 110 14 147 1.01e-46 152
Msa1100840 AT3G18400.1 57.812 128 29 1 8 110 5 132 5.57e-45 149
Msa1100840 AT5G53950.1 61.417 127 22 2 11 110 20 146 8.58e-45 149
Msa1100840 AT5G18270.2 57.143 133 31 2 4 110 17 149 2.10e-44 147
Msa1100840 AT5G18270.1 57.143 133 31 2 4 110 17 149 2.47e-44 147
Msa1100840 AT3G04060.1 54.545 143 38 3 2 118 14 155 8.96e-44 146
Msa1100840 AT3G15170.1 59.843 127 24 2 11 110 23 149 5.82e-43 143
Msa1100840 AT2G24430.2 55.147 136 34 2 4 112 12 147 7.07e-43 143
Msa1100840 AT2G24430.1 55.147 136 34 2 4 112 12 147 7.07e-43 143
Msa1100840 AT1G76420.1 52.206 136 38 2 8 116 22 157 1.25e-39 135
Msa1100840 AT5G61430.2 79.452 73 14 1 46 118 16 87 7.04e-37 127
Msa1100840 AT1G12260.2 51.163 129 35 1 11 111 10 138 7.72e-37 128
Msa1100840 AT1G12260.1 51.969 127 33 1 11 109 10 136 1.33e-36 129
Msa1100840 AT2G46770.1 46.528 144 49 1 3 118 11 154 2.41e-36 127
Msa1100840 AT4G36160.1 45.985 137 46 1 3 111 5 141 8.10e-36 126
Msa1100840 AT4G36160.3 45.985 137 46 1 3 111 5 141 8.10e-36 126
Msa1100840 AT4G36160.2 45.985 137 46 1 3 111 9 145 9.23e-36 126
Msa1100840 AT2G18060.3 47.059 136 44 1 4 111 5 140 9.63e-36 126
Msa1100840 AT2G18060.1 47.059 136 44 1 4 111 5 140 9.63e-36 126
Msa1100840 AT1G62700.1 52.756 127 32 1 11 109 10 136 1.38e-35 126
Msa1100840 AT1G62700.2 52.756 127 32 1 11 109 10 136 1.38e-35 126
Msa1100840 AT4G10350.1 51.181 127 34 1 11 109 12 138 3.18e-35 124
Msa1100840 AT1G71930.2 45.113 133 45 1 10 114 11 143 4.03e-35 123
Msa1100840 AT1G71930.1 45.113 133 45 1 10 114 11 143 4.03e-35 123
Msa1100840 AT5G62380.2 48.819 127 37 1 11 109 10 136 9.59e-35 123
Msa1100840 AT5G62380.1 48.819 127 37 1 11 109 10 136 9.59e-35 123
Msa1100840 AT1G32770.1 47.143 140 46 1 3 114 11 150 1.11e-34 123
Msa1100840 AT3G61910.1 45.324 139 48 1 3 113 6 144 1.26e-34 122
Msa1100840 AT1G33280.1 49.219 128 37 1 10 109 10 137 1.81e-34 121
Msa1100840 AT1G56010.2 45.113 133 47 2 5 111 16 148 4.05e-34 120
Msa1100840 AT1G33060.1 47.692 130 41 1 11 113 27 156 6.66e-34 124
Msa1100840 AT1G33060.2 47.692 130 41 1 11 113 27 156 7.28e-34 124
Msa1100840 AT5G66300.1 48.000 125 37 1 10 106 14 138 1.01e-33 119
Msa1100840 AT3G12977.1 44.531 128 46 1 11 113 21 148 1.01e-33 119
Msa1100840 AT4G35580.1 49.194 124 36 3 11 107 12 135 1.25e-33 122
Msa1100840 AT4G35580.2 49.194 124 36 3 11 107 12 135 1.47e-33 122
Msa1100840 AT4G35580.3 49.194 124 36 3 11 107 12 135 1.52e-33 122
Msa1100840 AT5G13180.1 43.939 132 50 2 1 108 7 138 4.24e-33 116
Msa1100840 AT2G33480.1 44.928 138 51 2 6 118 13 150 5.46e-33 116
Msa1100840 AT2G33480.2 47.200 125 44 1 6 108 13 137 6.48e-33 116
Msa1100840 AT5G04410.1 47.727 132 42 1 11 115 12 143 8.80e-33 120
Msa1100840 AT3G17730.1 45.038 131 45 1 6 109 4 134 9.51e-33 115
Msa1100840 AT3G10500.1 46.970 132 43 1 11 115 12 143 1.20e-32 120
Msa1100840 AT3G10490.1 50.400 125 35 1 11 108 30 154 1.33e-32 115
Msa1100840 AT3G15500.1 43.411 129 48 1 5 108 11 139 1.49e-32 116
Msa1100840 AT1G52890.1 44.186 129 47 1 5 108 11 139 1.88e-32 116
Msa1100840 AT3G10480.1 50.400 125 35 1 11 108 30 154 3.42e-32 118
Msa1100840 AT3G10480.2 50.400 125 35 1 11 108 30 154 4.04e-32 117
Msa1100840 AT5G08790.1 45.736 129 44 2 5 108 4 131 5.05e-32 114
Msa1100840 AT1G79580.3 47.015 134 42 2 5 109 14 147 6.39e-32 116
Msa1100840 AT1G79580.5 47.015 134 42 2 5 109 14 147 6.39e-32 116
Msa1100840 AT1G79580.4 47.015 134 42 2 5 109 14 147 6.39e-32 116
Msa1100840 AT1G79580.2 47.015 134 42 2 5 109 14 147 6.39e-32 116
Msa1100840 AT1G79580.1 47.015 134 42 2 5 109 14 147 6.39e-32 116
Msa1100840 AT1G01720.1 43.511 131 48 2 3 108 2 131 6.92e-32 114
Msa1100840 AT1G65910.1 44.275 131 46 1 6 109 4 134 8.46e-32 118
Msa1100840 AT4G27410.2 42.636 129 49 1 5 108 11 139 8.75e-32 114
Msa1100840 AT3G10490.2 50.400 125 35 1 11 108 30 154 8.83e-32 117
Msa1100840 AT2G27300.1 44.444 126 44 1 11 110 17 142 1.27e-31 114
Msa1100840 AT5G46590.2 46.269 134 44 2 10 115 8 141 1.38e-31 113
Msa1100840 AT5G46590.1 46.269 134 44 2 10 115 8 141 2.11e-31 113
Msa1100840 AT3G49530.1 44.444 135 47 2 11 117 16 150 2.67e-31 115
Msa1100840 AT3G49530.2 44.444 135 47 2 11 117 16 150 3.06e-31 115
Msa1100840 AT1G61110.1 45.038 131 46 2 10 114 18 148 5.96e-31 112
Msa1100840 AT1G77450.1 43.750 128 46 2 6 108 8 134 1.14e-30 110
Msa1100840 AT3G03200.1 45.802 131 44 1 6 109 4 134 1.91e-30 113
Msa1100840 AT5G17260.1 45.038 131 45 1 6 109 4 134 2.77e-30 113
Msa1100840 AT5G63790.1 44.186 129 46 2 5 108 47 174 2.99e-30 110
Msa1100840 AT5G63790.2 44.186 129 46 2 5 108 57 184 3.45e-30 110
Msa1100840 AT1G54330.1 46.923 130 42 1 6 108 4 133 1.79e-29 108
Msa1100840 AT5G24590.2 44.800 125 41 2 11 107 16 140 3.72e-29 109
Msa1100840 AT1G69490.1 45.968 124 42 1 10 108 11 134 4.87e-29 106
Msa1100840 AT4G27410.3 37.671 146 49 1 5 108 11 156 4.98e-29 107
Msa1100840 AT3G04070.2 43.357 143 50 3 2 114 4 145 5.46e-29 107
Msa1100840 AT5G09330.5 39.007 141 59 1 5 118 3 143 6.66e-29 109
Msa1100840 AT5G09330.2 39.007 141 59 1 5 118 3 143 6.66e-29 109
Msa1100840 AT5G09330.4 39.007 141 59 1 5 118 3 143 6.66e-29 109
Msa1100840 AT5G09330.3 39.007 141 59 1 5 118 3 143 6.66e-29 109
Msa1100840 AT5G09330.1 39.007 141 59 1 5 118 3 143 6.66e-29 109
Msa1100840 AT3G04070.1 43.357 143 50 3 2 114 4 145 9.94e-29 107
Msa1100840 AT5G22290.1 41.085 129 50 1 11 113 24 152 1.53e-28 106
Msa1100840 AT3G15510.1 44.355 124 42 2 12 108 21 144 1.60e-28 107
Msa1100840 AT4G17980.1 45.669 127 40 2 11 108 9 135 2.07e-28 104
Msa1100840 AT5G64060.1 37.589 141 61 1 5 118 3 143 3.10e-28 106
Msa1100840 AT4G17980.2 45.669 127 40 2 11 108 9 135 5.06e-28 104
Msa1100840 AT1G56010.1 66.667 66 22 0 46 111 16 81 9.66e-28 102
Msa1100840 AT3G44290.2 41.860 129 49 1 11 113 17 145 1.01e-27 102
Msa1100840 AT1G34180.3 42.336 137 51 2 7 115 14 150 1.98e-27 105
Msa1100840 AT5G39820.1 41.429 140 55 2 11 123 23 162 2.45e-27 103
Msa1100840 AT1G34190.1 41.606 137 52 2 7 115 14 150 2.76e-27 105
Msa1100840 AT1G34180.1 42.336 137 51 2 7 115 14 150 3.07e-27 105
Msa1100840 AT3G12977.2 63.235 68 25 0 46 113 28 95 3.74e-27 100
Msa1100840 AT3G44290.1 41.860 129 49 1 11 113 17 145 8.97e-27 102
Msa1100840 AT4G10350.2 68.750 64 20 0 46 109 28 91 9.29e-27 101
Msa1100840 AT1G34180.4 38.926 149 51 2 7 115 14 162 1.19e-25 100
Msa1100840 AT1G34180.2 38.926 149 51 2 7 115 14 162 1.31e-25 100
Msa1100840 AT4G28530.1 38.356 146 47 3 7 109 9 154 1.52e-25 99.0
Msa1100840 AT1G26870.1 42.742 124 44 2 11 107 19 142 2.78e-25 99.0
Msa1100840 AT3G10480.3 68.750 64 20 0 45 108 124 187 5.69e-25 99.0
Msa1100840 AT1G32510.1 39.161 143 53 2 10 118 8 150 7.74e-25 95.9
Msa1100840 AT2G02450.1 40.909 132 52 2 11 116 54 185 7.84e-25 97.4
Msa1100840 AT2G02450.2 40.909 132 52 2 11 116 54 185 9.97e-25 97.4
Msa1100840 AT2G43000.1 37.500 128 55 1 10 112 20 147 1.82e-24 94.7
Msa1100840 AT1G52880.1 42.636 129 45 2 12 111 21 149 4.43e-24 94.7
Msa1100840 AT2G33480.3 56.757 74 29 1 48 118 20 93 1.16e-23 91.3
Msa1100840 AT1G32870.3 43.077 130 49 1 11 115 49 178 2.58e-23 94.4
Msa1100840 AT1G32870.1 43.077 130 49 1 11 115 13 142 2.78e-23 94.0
Msa1100840 AT1G32870.2 43.077 130 49 1 11 115 13 142 2.83e-23 94.0
Msa1100840 AT3G12910.1 39.706 136 53 3 2 108 15 150 5.49e-23 91.3
Msa1100840 AT3G10490.4 73.585 53 14 0 56 108 2 54 6.11e-22 89.4
Msa1100840 AT3G10490.3 73.585 53 14 0 56 108 2 54 6.11e-22 89.4
Msa1100840 AT2G18060.2 68.627 51 16 0 61 111 2 52 1.35e-20 84.7
Msa1100840 AT2G17040.1 40.000 135 52 4 10 115 8 142 6.49e-20 82.8
Msa1100840 AT5G04395.1 37.324 142 48 2 11 111 31 172 1.48e-19 80.1
Msa1100840 AT5G22290.2 59.615 52 21 0 62 113 2 53 3.57e-19 80.1
Msa1100840 AT4G01550.1 39.552 134 50 5 6 108 2 135 5.20e-19 81.6
Msa1100840 AT5G22380.1 35.156 128 51 3 11 106 8 135 4.39e-18 77.4
Msa1100840 AT2G43000.2 46.970 66 35 0 47 112 4 69 9.65e-18 75.5
Msa1100840 AT3G44350.1 33.557 149 63 5 7 119 4 152 9.75e-18 74.7
Msa1100840 AT3G44350.2 33.333 150 67 5 7 123 4 153 4.71e-17 74.7
Msa1100840 AT4G01540.3 33.562 146 57 5 11 124 7 144 6.59e-16 72.8
Msa1100840 AT4G01540.1 33.562 146 57 5 11 124 7 144 6.61e-16 73.2
Msa1100840 AT4G01540.4 33.562 146 57 5 11 124 7 144 7.33e-16 72.8
Msa1100840 AT4G01540.2 33.562 146 57 5 11 124 7 144 7.58e-16 72.8
Msa1100840 AT4G01520.1 31.788 151 63 6 6 124 2 144 1.23e-15 71.6
Msa1100840 AT3G04420.2 33.846 130 49 2 10 106 5 130 3.18e-15 70.5
Msa1100840 AT3G04420.1 33.846 130 49 2 10 106 5 130 5.00e-15 70.1
Msa1100840 AT1G01010.1 32.237 152 56 6 11 125 6 147 7.55e-14 67.0
Msa1100840 AT3G56530.1 28.148 135 69 2 5 111 49 183 2.16e-12 62.8
Msa1100840 AT5G50820.1 29.787 141 78 4 1 120 10 150 3.29e-12 60.8
Msa1100840 AT1G02230.1 34.884 129 49 6 10 106 5 130 1.42e-11 60.5
Msa1100840 AT1G02220.1 32.800 125 52 3 11 106 6 127 1.52e-11 60.5

Find 29 sgRNAs with CRISPR-Local

Find 194 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAAGGGAAATTCATTAAT+CGG 0.266589 7_3:-31253048 Msa1100840:CDS
ATCGGTTGTGCTCAGGAAAA+AGG 0.384221 7_3:+31252917 None:intergenic
GAGCTACTAATGCTGGCTAT+TGG 0.387868 7_3:-31253098 Msa1100840:CDS
GCCAGCATTAGTAGCTCTAT+TGG 0.388516 7_3:+31253104 None:intergenic
TATTGGTCCTTTGACCAGTT+GGG 0.417126 7_3:+31253121 None:intergenic
ACAAGGGAAATTCATTAATC+GGG 0.420542 7_3:-31253047 Msa1100840:CDS
CTATTGGTCCTTTGACCAGT+TGG 0.441493 7_3:+31253120 None:intergenic
GAAAAGGTCAAATTTGATGC+TGG 0.459107 7_3:-31254001 Msa1100840:CDS
AAATCAATACCTTGTCAAGA+AGG 0.466786 7_3:-31253945 Msa1100840:CDS
GCTGGCTATTGGAAAGCAAC+AGG 0.467708 7_3:-31253087 Msa1100840:CDS
ACCAATAGAGCTACTAATGC+TGG 0.495849 7_3:-31253105 Msa1100840:CDS
TTGATTTATAAGCTCTTCAT+CGG 0.497039 7_3:+31253961 None:intergenic
TTTATAAGCTCTTCATCGGT+CGG 0.536559 7_3:+31253965 None:intergenic
AGGGACAGAAAATACCCAAC+TGG 0.538414 7_3:-31253135 Msa1100840:intron
CAACCGATCCACACATGGAA+TGG 0.549333 7_3:-31252902 None:intergenic
TGTGTGGATCGGTTGTGCTC+AGG 0.549723 7_3:+31252910 None:intergenic
TTACCATTCCATGTGTGGAT+CGG 0.563735 7_3:+31252899 None:intergenic
GTATTCATGCATGACCCAGT+TGG 0.566311 7_3:+31252972 None:intergenic
CAAAGACAAAGAGATTTACA+AGG 0.568333 7_3:-31253064 Msa1100840:CDS
CAATATTACCATTCCATGTG+TGG 0.569497 7_3:+31252894 None:intergenic
AGAGTGAGTTACCCTCCAAT+CGG 0.585613 7_3:+31252950 None:intergenic
GGTCATGCATGAATACCGAT+TGG 0.588791 7_3:-31252965 Msa1100840:CDS
CATGCATGAATACCGATTGG+AGG 0.592763 7_3:-31252962 Msa1100840:CDS
GAAAATACCCAACTGGTCAA+AGG 0.598845 7_3:-31253128 Msa1100840:CDS
ATGCATGAATACCGATTGGA+GGG 0.621001 7_3:-31252961 Msa1100840:CDS
GAGCACAACCGATCCACACA+TGG 0.630980 7_3:-31252907 Msa1100840:CDS
TGTCATCAACCTTCTTGACA+AGG 0.634308 7_3:+31253936 None:intergenic
AAAGACAAAGAGATTTACAA+GGG 0.662925 7_3:-31253063 Msa1100840:CDS
TACATAGGAAGAGCTCCAAG+AGG 0.736988 7_3:-31253003 Msa1100840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTGAATTTAATGTTTTTTAT+AGG - chr7_3:31253066-31253085 Msa1100840:CDS 15.0%
!! AAAAAGAAAGAAAAACAATT+TGG - chr7_3:31253389-31253408 Msa1100840:intron 15.0%
!!! AATTATGCTTTCTTATTTTT+TGG - chr7_3:31253702-31253721 Msa1100840:intron 15.0%
!!! GTGAATTTAATGTTTTTTAT+AGG - chr7_3:31253066-31253085 Msa1100840:CDS 15.0%
!! AAAAAGAAAGAAAAACAATT+TGG - chr7_3:31253389-31253408 Msa1100840:intron 15.0%
!!! AATTATGCTTTCTTATTTTT+TGG - chr7_3:31253702-31253721 Msa1100840:intron 15.0%
!! TAAAAAACATTAAATTCACC+TGG + chr7_3:31253065-31253084 None:intergenic 20.0%
!!! AAAATTTGCTCAAATTACAA+GGG - chr7_3:31253258-31253277 Msa1100840:intron 20.0%
!! TAAAAAACATTAAATTCACC+TGG + chr7_3:31253065-31253084 None:intergenic 20.0%
!!! AAAATTTGCTCAAATTACAA+GGG - chr7_3:31253258-31253277 Msa1100840:intron 20.0%
! TTGATTTATAAGCTCTTCAT+CGG + chr7_3:31252955-31252974 None:intergenic 25.0%
! ATATGAATAAGTTTGAACCA+TGG - chr7_3:31253033-31253052 Msa1100840:CDS 25.0%
! TATGAATAAGTTTGAACCAT+GGG - chr7_3:31253034-31253053 Msa1100840:CDS 25.0%
! ACTGTACAAAATCAATGATA+TGG - chr7_3:31253191-31253210 Msa1100840:intron 25.0%
!! CTTGTAATTTGAGCAAATTT+TGG + chr7_3:31253259-31253278 None:intergenic 25.0%
!! CAAAATTTGCTCAAATTACA+AGG - chr7_3:31253257-31253276 Msa1100840:intron 25.0%
!! AAATTTGCTCAAATTACAAG+GGG - chr7_3:31253259-31253278 Msa1100840:intron 25.0%
! TCATAAAAACATACCAAAGA+AGG - chr7_3:31253333-31253352 Msa1100840:intron 25.0%
!!! TTTTTTGGTTTATTCAGTGA+TGG - chr7_3:31253717-31253736 Msa1100840:intron 25.0%
! AAAGACAAAGAGATTTACAA+GGG - chr7_3:31253850-31253869 Msa1100840:intron 25.0%
! TACAAGGGAAATTCATTAAT+CGG - chr7_3:31253865-31253884 Msa1100840:intron 25.0%
! TTGATTTATAAGCTCTTCAT+CGG + chr7_3:31252955-31252974 None:intergenic 25.0%
! ATATGAATAAGTTTGAACCA+TGG - chr7_3:31253033-31253052 Msa1100840:CDS 25.0%
! TATGAATAAGTTTGAACCAT+GGG - chr7_3:31253034-31253053 Msa1100840:CDS 25.0%
! ACTGTACAAAATCAATGATA+TGG - chr7_3:31253191-31253210 Msa1100840:intron 25.0%
!! CTTGTAATTTGAGCAAATTT+TGG + chr7_3:31253259-31253278 None:intergenic 25.0%
!! CAAAATTTGCTCAAATTACA+AGG - chr7_3:31253257-31253276 Msa1100840:intron 25.0%
!! AAATTTGCTCAAATTACAAG+GGG - chr7_3:31253259-31253278 Msa1100840:intron 25.0%
! TCATAAAAACATACCAAAGA+AGG - chr7_3:31253333-31253352 Msa1100840:intron 25.0%
!!! TTTTTTGGTTTATTCAGTGA+TGG - chr7_3:31253717-31253736 Msa1100840:intron 25.0%
! AAAGACAAAGAGATTTACAA+GGG - chr7_3:31253850-31253869 Msa1100840:intron 25.0%
! TACAAGGGAAATTCATTAAT+CGG - chr7_3:31253865-31253884 Msa1100840:intron 25.0%
AAATCAATACCTTGTCAAGA+AGG - chr7_3:31252968-31252987 Msa1100840:CDS 30.0%
GAAATGGTCTATATTATAGG+GGG + chr7_3:31253140-31253159 None:intergenic 30.0%
GGAAATGGTCTATATTATAG+GGG + chr7_3:31253141-31253160 None:intergenic 30.0%
CGGAAATGGTCTATATTATA+GGG + chr7_3:31253142-31253161 None:intergenic 30.0%
CCTATAATATAGACCATTTC+CGG - chr7_3:31253140-31253159 Msa1100840:intron 30.0%
CTATAATATAGACCATTTCC+GGG - chr7_3:31253141-31253160 Msa1100840:intron 30.0%
TACAAAATCAATGATATGGC+AGG - chr7_3:31253195-31253214 Msa1100840:intron 30.0%
ACAAAATCAATGATATGGCA+GGG - chr7_3:31253196-31253215 Msa1100840:intron 30.0%
! AATTTGCTCAAATTACAAGG+GGG - chr7_3:31253260-31253279 Msa1100840:intron 30.0%
CACATAATTTAAGCCTTCTT+TGG + chr7_3:31253349-31253368 None:intergenic 30.0%
CAAAGAAGGCTTAAATTATG+TGG - chr7_3:31253347-31253366 Msa1100840:intron 30.0%
GAAAGAAAAACAATTTGGAG+TGG - chr7_3:31253394-31253413 Msa1100840:intron 30.0%
! CTTTTCTCCTTACAAATGAA+GGG + chr7_3:31253450-31253469 None:intergenic 30.0%
! TCTTTTCTCCTTACAAATGA+AGG + chr7_3:31253451-31253470 None:intergenic 30.0%
AAGAAACGAGAATATATCGA+AGG + chr7_3:31253490-31253509 None:intergenic 30.0%
ATTCTCGTTTCTTACTTTGA+TGG - chr7_3:31253497-31253516 Msa1100840:intron 30.0%
TTATTCAGTGATGGCTAAAA+TGG - chr7_3:31253726-31253745 Msa1100840:intron 30.0%
TATTCAGTGATGGCTAAAAT+GGG - chr7_3:31253727-31253746 Msa1100840:intron 30.0%
!!! AATGGTATTTTTTCTGTGTG+AGG - chr7_3:31253758-31253777 Msa1100840:intron 30.0%
!!! ATGGTATTTTTTCTGTGTGA+GGG - chr7_3:31253759-31253778 Msa1100840:intron 30.0%
CAAAGACAAAGAGATTTACA+AGG - chr7_3:31253849-31253868 Msa1100840:intron 30.0%
ACAAGGGAAATTCATTAATC+GGG - chr7_3:31253866-31253885 Msa1100840:intron 30.0%
!!! AAAACACTGGTTTTCTACAT+AGG - chr7_3:31253895-31253914 Msa1100840:CDS 30.0%
AAATCAATACCTTGTCAAGA+AGG - chr7_3:31252968-31252987 Msa1100840:CDS 30.0%
GAAATGGTCTATATTATAGG+GGG + chr7_3:31253140-31253159 None:intergenic 30.0%
GGAAATGGTCTATATTATAG+GGG + chr7_3:31253141-31253160 None:intergenic 30.0%
CGGAAATGGTCTATATTATA+GGG + chr7_3:31253142-31253161 None:intergenic 30.0%
CCTATAATATAGACCATTTC+CGG - chr7_3:31253140-31253159 Msa1100840:intron 30.0%
CTATAATATAGACCATTTCC+GGG - chr7_3:31253141-31253160 Msa1100840:intron 30.0%
TACAAAATCAATGATATGGC+AGG - chr7_3:31253195-31253214 Msa1100840:intron 30.0%
ACAAAATCAATGATATGGCA+GGG - chr7_3:31253196-31253215 Msa1100840:intron 30.0%
! AATTTGCTCAAATTACAAGG+GGG - chr7_3:31253260-31253279 Msa1100840:intron 30.0%
CACATAATTTAAGCCTTCTT+TGG + chr7_3:31253349-31253368 None:intergenic 30.0%
CAAAGAAGGCTTAAATTATG+TGG - chr7_3:31253347-31253366 Msa1100840:intron 30.0%
GAAAGAAAAACAATTTGGAG+TGG - chr7_3:31253394-31253413 Msa1100840:intron 30.0%
! CTTTTCTCCTTACAAATGAA+GGG + chr7_3:31253450-31253469 None:intergenic 30.0%
! TCTTTTCTCCTTACAAATGA+AGG + chr7_3:31253451-31253470 None:intergenic 30.0%
AAGAAACGAGAATATATCGA+AGG + chr7_3:31253490-31253509 None:intergenic 30.0%
ATTCTCGTTTCTTACTTTGA+TGG - chr7_3:31253497-31253516 Msa1100840:intron 30.0%
TTATTCAGTGATGGCTAAAA+TGG - chr7_3:31253726-31253745 Msa1100840:intron 30.0%
TATTCAGTGATGGCTAAAAT+GGG - chr7_3:31253727-31253746 Msa1100840:intron 30.0%
!!! AATGGTATTTTTTCTGTGTG+AGG - chr7_3:31253758-31253777 Msa1100840:intron 30.0%
!!! ATGGTATTTTTTCTGTGTGA+GGG - chr7_3:31253759-31253778 Msa1100840:intron 30.0%
CAAAGACAAAGAGATTTACA+AGG - chr7_3:31253849-31253868 Msa1100840:intron 30.0%
ACAAGGGAAATTCATTAATC+GGG - chr7_3:31253866-31253885 Msa1100840:intron 30.0%
!!! AAAACACTGGTTTTCTACAT+AGG - chr7_3:31253895-31253914 Msa1100840:CDS 30.0%
GAAAAGGTCAAATTTGATGC+TGG - chr7_3:31252912-31252931 Msa1100840:CDS 35.0%
TTTATAAGCTCTTCATCGGT+CGG + chr7_3:31252951-31252970 None:intergenic 35.0%
CCGGAAATGGTCTATATTAT+AGG + chr7_3:31253143-31253162 None:intergenic 35.0%
CAAAATCAATGATATGGCAG+GGG - chr7_3:31253197-31253216 Msa1100840:intron 35.0%
AAAATCAATGATATGGCAGG+GGG - chr7_3:31253198-31253217 Msa1100840:intron 35.0%
CTGGTACTTTGAGCAAATTT+CGG + chr7_3:31253228-31253247 None:intergenic 35.0%
! GAAATTTGCTCAAAGTACCA+GGG - chr7_3:31253227-31253246 Msa1100840:intron 35.0%
! AAATTTGCTCAAAGTACCAG+GGG - chr7_3:31253228-31253247 Msa1100840:intron 35.0%
! ACAATTTGGAGTGGTGATTT+CGG - chr7_3:31253403-31253422 Msa1100840:intron 35.0%
TTACAAATGAAGGGTGGTTT+AGG + chr7_3:31253441-31253460 None:intergenic 35.0%
TAAACCACCCTTCATTTGTA+AGG - chr7_3:31253440-31253459 Msa1100840:intron 35.0%
TTTGTAAGGAGAAAAGAGAG+TGG - chr7_3:31253454-31253473 Msa1100840:intron 35.0%
AACACATTATGATGTGTCAG+TGG + chr7_3:31253551-31253570 None:intergenic 35.0%
CTGACACATCATAATGTGTT+AGG - chr7_3:31253551-31253570 Msa1100840:intron 35.0%
AATCGGGATGAAAAAAACAC+TGG - chr7_3:31253882-31253901 Msa1100840:intron 35.0%
AAGAGGTGAAAAATCCAACT+GGG - chr7_3:31253927-31253946 Msa1100840:CDS 35.0%
GAAAAGGTCAAATTTGATGC+TGG - chr7_3:31252912-31252931 Msa1100840:CDS 35.0%
TTTATAAGCTCTTCATCGGT+CGG + chr7_3:31252951-31252970 None:intergenic 35.0%
CCGGAAATGGTCTATATTAT+AGG + chr7_3:31253143-31253162 None:intergenic 35.0%
CAAAATCAATGATATGGCAG+GGG - chr7_3:31253197-31253216 Msa1100840:intron 35.0%
AAAATCAATGATATGGCAGG+GGG - chr7_3:31253198-31253217 Msa1100840:intron 35.0%
CTGGTACTTTGAGCAAATTT+CGG + chr7_3:31253228-31253247 None:intergenic 35.0%
! GAAATTTGCTCAAAGTACCA+GGG - chr7_3:31253227-31253246 Msa1100840:intron 35.0%
! AAATTTGCTCAAAGTACCAG+GGG - chr7_3:31253228-31253247 Msa1100840:intron 35.0%
! ACAATTTGGAGTGGTGATTT+CGG - chr7_3:31253403-31253422 Msa1100840:intron 35.0%
TTACAAATGAAGGGTGGTTT+AGG + chr7_3:31253441-31253460 None:intergenic 35.0%
TAAACCACCCTTCATTTGTA+AGG - chr7_3:31253440-31253459 Msa1100840:intron 35.0%
TTTGTAAGGAGAAAAGAGAG+TGG - chr7_3:31253454-31253473 Msa1100840:intron 35.0%
AACACATTATGATGTGTCAG+TGG + chr7_3:31253551-31253570 None:intergenic 35.0%
CTGACACATCATAATGTGTT+AGG - chr7_3:31253551-31253570 Msa1100840:intron 35.0%
AATCGGGATGAAAAAAACAC+TGG - chr7_3:31253882-31253901 Msa1100840:intron 35.0%
AAGAGGTGAAAAATCCAACT+GGG - chr7_3:31253927-31253946 Msa1100840:CDS 35.0%
TGTCATCAACCTTCTTGACA+AGG + chr7_3:31252980-31252999 None:intergenic 40.0%
TTTGAACCATGGGATTTACC+AGG - chr7_3:31253044-31253063 Msa1100840:CDS 40.0%
AATTCACCTGGTAAATCCCA+TGG + chr7_3:31253053-31253072 None:intergenic 40.0%
!!! GGTATTTTGAAACCCGGAAA+TGG + chr7_3:31253156-31253175 None:intergenic 40.0%
TTGTACAGTCAGATGACCTA+GGG + chr7_3:31253180-31253199 None:intergenic 40.0%
TTTGTACAGTCAGATGACCT+AGG + chr7_3:31253181-31253200 None:intergenic 40.0%
! CGAAATTTGCTCAAAGTACC+AGG - chr7_3:31253226-31253245 Msa1100840:intron 40.0%
! AATTTGCTCAAAGTACCAGG+GGG - chr7_3:31253229-31253248 Msa1100840:intron 40.0%
! CAATTTGGAGTGGTGATTTC+GGG - chr7_3:31253404-31253423 Msa1100840:intron 40.0%
TTCTCCTTACAAATGAAGGG+TGG + chr7_3:31253447-31253466 None:intergenic 40.0%
CACGTCTATTAGTGTCATGT+TGG + chr7_3:31253585-31253604 None:intergenic 40.0%
CAACATGACACTAATAGACG+TGG - chr7_3:31253583-31253602 Msa1100840:intron 40.0%
GATGGCTAAAATGGGAGAAA+CGG - chr7_3:31253735-31253754 Msa1100840:intron 40.0%
CTAAAATGGGAGAAACGGAA+TGG - chr7_3:31253740-31253759 Msa1100840:intron 40.0%
GAAAATACCCAACTGGTCAA+AGG - chr7_3:31253785-31253804 Msa1100840:intron 40.0%
TATTGGTCCTTTGACCAGTT+GGG + chr7_3:31253795-31253814 None:intergenic 40.0%
ACCAATAGAGCTACTAATGC+TGG - chr7_3:31253808-31253827 Msa1100840:intron 40.0%
! CAGTTGGATTTTTCACCTCT+TGG + chr7_3:31253928-31253947 None:intergenic 40.0%
CAAGAGGTGAAAAATCCAAC+TGG - chr7_3:31253926-31253945 Msa1100840:CDS 40.0%
! ATGCATGAATACCGATTGGA+GGG - chr7_3:31253952-31253971 Msa1100840:CDS 40.0%
TGTCATCAACCTTCTTGACA+AGG + chr7_3:31252980-31252999 None:intergenic 40.0%
TTTGAACCATGGGATTTACC+AGG - chr7_3:31253044-31253063 Msa1100840:CDS 40.0%
AATTCACCTGGTAAATCCCA+TGG + chr7_3:31253053-31253072 None:intergenic 40.0%
!!! GGTATTTTGAAACCCGGAAA+TGG + chr7_3:31253156-31253175 None:intergenic 40.0%
TTGTACAGTCAGATGACCTA+GGG + chr7_3:31253180-31253199 None:intergenic 40.0%
TTTGTACAGTCAGATGACCT+AGG + chr7_3:31253181-31253200 None:intergenic 40.0%
! CGAAATTTGCTCAAAGTACC+AGG - chr7_3:31253226-31253245 Msa1100840:intron 40.0%
! AATTTGCTCAAAGTACCAGG+GGG - chr7_3:31253229-31253248 Msa1100840:intron 40.0%
! CAATTTGGAGTGGTGATTTC+GGG - chr7_3:31253404-31253423 Msa1100840:intron 40.0%
TTCTCCTTACAAATGAAGGG+TGG + chr7_3:31253447-31253466 None:intergenic 40.0%
CACGTCTATTAGTGTCATGT+TGG + chr7_3:31253585-31253604 None:intergenic 40.0%
CAACATGACACTAATAGACG+TGG - chr7_3:31253583-31253602 Msa1100840:intron 40.0%
GATGGCTAAAATGGGAGAAA+CGG - chr7_3:31253735-31253754 Msa1100840:intron 40.0%
CTAAAATGGGAGAAACGGAA+TGG - chr7_3:31253740-31253759 Msa1100840:intron 40.0%
GAAAATACCCAACTGGTCAA+AGG - chr7_3:31253785-31253804 Msa1100840:intron 40.0%
TATTGGTCCTTTGACCAGTT+GGG + chr7_3:31253795-31253814 None:intergenic 40.0%
ACCAATAGAGCTACTAATGC+TGG - chr7_3:31253808-31253827 Msa1100840:intron 40.0%
! CAGTTGGATTTTTCACCTCT+TGG + chr7_3:31253928-31253947 None:intergenic 40.0%
CAAGAGGTGAAAAATCCAAC+TGG - chr7_3:31253926-31253945 Msa1100840:CDS 40.0%
! ATGCATGAATACCGATTGGA+GGG - chr7_3:31253952-31253971 Msa1100840:CDS 40.0%
!!! TAGGGGGGTATTTTGAAACC+CGG + chr7_3:31253162-31253181 None:intergenic 45.0%
TGTACAGTCAGATGACCTAG+GGG + chr7_3:31253179-31253198 None:intergenic 45.0%
!!! GCAAATTTTGGTTTACCCCC+TGG + chr7_3:31253247-31253266 None:intergenic 45.0%
AGGGACAGAAAATACCCAAC+TGG - chr7_3:31253778-31253797 Msa1100840:intron 45.0%
CTATTGGTCCTTTGACCAGT+TGG + chr7_3:31253796-31253815 None:intergenic 45.0%
! GCCAGCATTAGTAGCTCTAT+TGG + chr7_3:31253812-31253831 None:intergenic 45.0%
! GAGCTACTAATGCTGGCTAT+TGG - chr7_3:31253815-31253834 Msa1100840:intron 45.0%
TACATAGGAAGAGCTCCAAG+AGG - chr7_3:31253910-31253929 Msa1100840:CDS 45.0%
GTATTCATGCATGACCCAGT+TGG + chr7_3:31253944-31253963 None:intergenic 45.0%
GGTCATGCATGAATACCGAT+TGG - chr7_3:31253948-31253967 Msa1100840:CDS 45.0%
! CATGCATGAATACCGATTGG+AGG - chr7_3:31253951-31253970 Msa1100840:CDS 45.0%
AGAGTGAGTTACCCTCCAAT+CGG + chr7_3:31253966-31253985 None:intergenic 45.0%
ATCGGTTGTGCTCAGGAAAA+AGG + chr7_3:31253999-31254018 None:intergenic 45.0%
!!! TAGGGGGGTATTTTGAAACC+CGG + chr7_3:31253162-31253181 None:intergenic 45.0%
TGTACAGTCAGATGACCTAG+GGG + chr7_3:31253179-31253198 None:intergenic 45.0%
!!! GCAAATTTTGGTTTACCCCC+TGG + chr7_3:31253247-31253266 None:intergenic 45.0%
AGGGACAGAAAATACCCAAC+TGG - chr7_3:31253778-31253797 Msa1100840:intron 45.0%
CTATTGGTCCTTTGACCAGT+TGG + chr7_3:31253796-31253815 None:intergenic 45.0%
! GCCAGCATTAGTAGCTCTAT+TGG + chr7_3:31253812-31253831 None:intergenic 45.0%
! GAGCTACTAATGCTGGCTAT+TGG - chr7_3:31253815-31253834 Msa1100840:intron 45.0%
TACATAGGAAGAGCTCCAAG+AGG - chr7_3:31253910-31253929 Msa1100840:CDS 45.0%
GTATTCATGCATGACCCAGT+TGG + chr7_3:31253944-31253963 None:intergenic 45.0%
GGTCATGCATGAATACCGAT+TGG - chr7_3:31253948-31253967 Msa1100840:CDS 45.0%
! CATGCATGAATACCGATTGG+AGG - chr7_3:31253951-31253970 Msa1100840:CDS 45.0%
AGAGTGAGTTACCCTCCAAT+CGG + chr7_3:31253966-31253985 None:intergenic 45.0%
ATCGGTTGTGCTCAGGAAAA+AGG + chr7_3:31253999-31254018 None:intergenic 45.0%
!!! TTGTTTTTATATAATATTAT+AGG - chr7_3:31253099-31253118 Msa1100840:CDS 5.0%
!!! TTGTTTTTATATAATATTAT+AGG - chr7_3:31253099-31253118 Msa1100840:CDS 5.0%
GGGTTTCAAAATACCCCCCT+AGG - chr7_3:31253161-31253180 Msa1100840:intron 50.0%
TACAGTCAGATGACCTAGGG+GGG + chr7_3:31253177-31253196 None:intergenic 50.0%
GTACAGTCAGATGACCTAGG+GGG + chr7_3:31253178-31253197 None:intergenic 50.0%
GGGGGTAAACTGAACCAAAG+AGG - chr7_3:31253278-31253297 Msa1100840:intron 50.0%
ACGTTGTTCGTCGTCCTCTT+TGG + chr7_3:31253295-31253314 None:intergenic 50.0%
GCTGGCTATTGGAAAGCAAC+AGG - chr7_3:31253826-31253845 Msa1100840:intron 50.0%
GGGTTTCAAAATACCCCCCT+AGG - chr7_3:31253161-31253180 Msa1100840:intron 50.0%
TACAGTCAGATGACCTAGGG+GGG + chr7_3:31253177-31253196 None:intergenic 50.0%
GTACAGTCAGATGACCTAGG+GGG + chr7_3:31253178-31253197 None:intergenic 50.0%
GGGGGTAAACTGAACCAAAG+AGG - chr7_3:31253278-31253297 Msa1100840:intron 50.0%
ACGTTGTTCGTCGTCCTCTT+TGG + chr7_3:31253295-31253314 None:intergenic 50.0%
GCTGGCTATTGGAAAGCAAC+AGG - chr7_3:31253826-31253845 Msa1100840:intron 50.0%
TGTGTGGATCGGTTGTGCTC+AGG + chr7_3:31254006-31254025 None:intergenic 55.0%
GAGCACAACCGATCCACACA+TGG - chr7_3:31254006-31254025 Msa1100840:CDS 55.0%
TGTGTGGATCGGTTGTGCTC+AGG + chr7_3:31254006-31254025 None:intergenic 55.0%
GAGCACAACCGATCCACACA+TGG - chr7_3:31254006-31254025 Msa1100840:CDS 55.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 31252903 31254032 31252903 ID=Msa1100840;Name=Msa1100840
chr7_3 mRNA 31252903 31254032 31252903 ID=Msa1100840-mRNA-1;Parent=Msa1100840;Name=Msa1100840-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|0|0|2|0|129
chr7_3 exon 31253893 31254032 31253893 ID=Msa1100840-mRNA-1:exon:6636;Parent=Msa1100840-mRNA-1
chr7_3 exon 31252903 31253149 31252903 ID=Msa1100840-mRNA-1:exon:6635;Parent=Msa1100840-mRNA-1
chr7_3 CDS 31253893 31254032 31253893 ID=Msa1100840-mRNA-1:cds;Parent=Msa1100840-mRNA-1
chr7_3 CDS 31252903 31253149 31252903 ID=Msa1100840-mRNA-1:cds;Parent=Msa1100840-mRNA-1
Gene Sequence

>Msa1100840

ATGGAAAATGAAAAGGTCAAATTTGATGCTGGTTTTCGATTCTTTCCGACCGATGAAGAGCTTATAAATCAATACCTTGTCAAGAAGGTTGATGACAATAGCTTCTGTGCTATAGCTATTGCTGAAGTTGATATGAATAAAAAATACCCAACTGGTCAAAGGACCAATAGAGCTACTAATGCTGGCTATTGGAAAGCAACAGGCAAAGACAAAGAGATTTACAAGGGAAATTCATTAATCGGGATGAAAAAAACACTGGTTTTCTACATAGGAAGAGCTCCAAGAGGTGAAAAATCCAACTGGGTCATGCATGAATACCGATTGGAGGGTAACTCACTCTCTAAGCACAACCTTTTTCCTGAGCACAACCGATCCACACATGGAATG
Protein sequence

>Msa1100840

MENEKVKFDAGFRFFPTDEELINQYLVKKVDDNSFCAIAIAEVDMNKKYPTGQRTNRATNAGYWKATGKDKEIYKGNSLIGMKKTLVFYIGRAPRGEKSNWVMHEYRLEGNSLSKHNLFPEHNRSTHGM