AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1101960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1101960 MtrunA17_Chr7g0230771 95.396 543 19 3 1 542 4 541 0.0 1051
Msa1101960 MtrunA17_Chr7g0230731 94.465 542 23 3 1 542 4 538 0.0 1039
Msa1101960 MtrunA17_Chr4g0012071 51.312 343 108 12 207 537 60 355 1.60e-89 286
Msa1101960 MtrunA17_Chr8g0373561 42.197 173 95 4 373 543 180 349 1.43e-30 125
Msa1101960 MtrunA17_Chr7g0224271 32.394 213 104 5 320 513 264 455 3.07e-20 94.7
Msa1101960 MtrunA17_Chr5g0424131 38.065 155 80 5 372 515 118 267 4.77e-19 90.5
Msa1101960 MtrunA17_Chr2g0306641 34.637 179 99 4 372 543 122 289 2.89e-18 87.8
Msa1101960 MtrunA17_Chr3g0110971 32.738 168 105 2 372 539 216 375 3.49e-17 84.7
Msa1101960 MtrunA17_Chr8g0376381 30.508 177 102 3 372 543 166 326 3.85e-17 84.3
Msa1101960 MtrunA17_Chr4g0039661 36.496 137 85 1 372 508 190 324 2.29e-16 82.0
Msa1101960 MtrunA17_Chr4g0038761 31.176 170 106 3 378 542 87 250 3.95e-16 80.9
Msa1101960 MtrunA17_Chr7g0245601 36.429 140 85 3 378 515 441 578 9.95e-16 80.5
Msa1101960 MtrunA17_Chr4g0038851 33.918 171 102 3 352 513 19 187 3.22e-15 78.2
Msa1101960 MtrunA17_Chr4g0031741 31.469 143 95 1 376 518 285 424 1.98e-14 76.3
Msa1101960 MtrunA17_Chr3g0101141 31.469 143 96 2 374 515 174 315 6.66e-14 74.3
Msa1101960 MtrunA17_Chr5g0396491 29.697 165 115 1 352 515 33 197 7.71e-14 73.9
Msa1101960 MtrunA17_Chr5g0445331 32.639 144 92 2 376 515 162 304 9.18e-14 73.9
Msa1101960 MtrunA17_Chr3g0114841 31.548 168 81 5 372 515 117 274 1.05e-13 73.6
Msa1101960 MtrunA17_Chr8g0383981 29.070 172 112 5 369 537 133 297 1.06e-13 73.6
Msa1101960 MtrunA17_Chr4g0057291 30.114 176 114 4 372 542 289 460 1.73e-13 73.2
Msa1101960 MtrunA17_Chr2g0328341 29.333 150 106 0 376 525 273 422 2.41e-13 72.8
Msa1101960 MtrunA17_Chr2g0328431 28.082 146 96 2 376 518 290 429 2.97e-13 72.4
Msa1101960 MtrunA17_Chr2g0319091 30.818 159 109 1 361 518 197 355 6.42e-13 71.2
Msa1101960 MtrunA17_Chr7g0238891 28.758 153 106 1 369 518 363 515 1.03e-12 70.9
Msa1101960 MtrunA17_Chr1g0183641 34.899 149 84 4 372 515 120 260 1.11e-12 70.5
Msa1101960 MtrunA17_Chr2g0328381 28.859 149 106 0 376 524 276 424 1.56e-12 70.1
Msa1101960 MtrunA17_Chr3g0125811 29.371 143 101 0 376 518 204 346 1.92e-12 69.7
Msa1101960 MtrunA17_Chr2g0290241 29.861 144 98 3 374 515 56 198 2.19e-12 69.3
Msa1101960 MtrunA17_Chr5g0447691 31.293 147 95 3 376 519 178 321 2.73e-12 69.3
Msa1101960 MtrunA17_Chr2g0328411 25.843 178 113 3 354 518 258 429 3.11e-12 69.3
Msa1101960 MtrunA17_Chr2g0328391 29.932 147 96 2 376 518 300 443 6.46e-12 68.2
Msa1101960 MtrunA17_Chr1g0159461 27.972 143 103 0 376 518 226 368 8.74e-12 67.8
Msa1101960 MtrunA17_Chr2g0329591 29.801 151 95 2 394 537 93 239 1.11e-11 67.0
Msa1101960 MtrunA17_Chr3g0085681 30.769 143 94 2 376 515 26 166 1.15e-11 67.0
Msa1101960 MtrunA17_Chr2g0328401 26.027 146 99 2 376 518 291 430 2.65e-11 66.2
Msa1101960 MtrunA17_Chr5g0401131 30.201 149 93 2 376 517 115 259 9.08e-11 64.3
Msa1101960 MtrunA17_Chr4g0031711 29.530 149 96 3 376 518 362 507 9.60e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1101960 AT4G00150.1 56.716 201 64 6 340 538 187 366 7.41e-60 207
Msa1101960 AT2G45160.1 43.590 273 121 11 290 542 193 452 5.67e-47 174
Msa1101960 AT3G60630.1 40.065 307 114 10 269 540 154 425 1.85e-44 167
Msa1101960 AT4G36710.1 36.000 175 104 4 373 543 123 293 2.46e-27 115
Msa1101960 AT5G66770.1 30.208 192 125 5 354 542 200 385 6.65e-18 87.4
Msa1101960 AT3G54220.1 35.461 141 88 1 378 515 296 436 3.36e-17 85.5
Msa1101960 AT2G01570.1 31.325 166 108 1 372 537 221 380 1.01e-16 84.0
Msa1101960 AT4G17230.1 36.242 149 87 3 369 513 152 296 2.09e-16 82.8
Msa1101960 AT4G17230.2 36.242 149 87 3 369 513 152 296 2.09e-16 82.8
Msa1101960 AT1G14920.1 33.333 150 90 4 372 519 169 310 5.59e-16 81.3
Msa1101960 AT3G50650.1 35.404 161 95 3 385 542 185 339 1.30e-15 80.1
Msa1101960 AT5G41920.1 28.169 213 127 6 338 542 16 210 2.10e-15 79.0
Msa1101960 AT3G03450.1 30.409 171 107 3 372 537 180 343 1.09e-14 77.4
Msa1101960 AT5G17490.1 31.325 166 105 4 372 535 157 315 1.67e-14 76.6
Msa1101960 AT1G50420.1 31.447 159 90 4 372 521 54 202 7.11e-14 74.7
Msa1101960 AT4G08250.1 33.553 152 90 5 372 515 104 252 2.06e-13 73.2
Msa1101960 AT5G59450.1 26.923 182 128 3 342 518 190 371 3.40e-13 72.8
Msa1101960 AT2G04890.1 32.374 139 92 2 376 513 54 191 4.22e-13 71.6
Msa1101960 AT5G48150.1 29.078 141 99 1 376 515 123 263 5.07e-13 72.0
Msa1101960 AT5G48150.4 29.078 141 99 1 376 515 123 263 5.07e-13 72.0
Msa1101960 AT5G48150.2 29.078 141 99 1 376 515 123 263 5.07e-13 72.0
Msa1101960 AT5G48150.3 29.078 141 99 1 376 515 123 263 5.07e-13 72.0
Msa1101960 AT1G63100.2 29.714 175 115 3 372 542 274 444 9.58e-13 71.2
Msa1101960 AT1G63100.1 29.714 175 115 3 372 542 249 419 1.03e-12 71.2
Msa1101960 AT3G46600.1 28.395 162 108 2 364 518 194 354 1.04e-12 71.2
Msa1101960 AT1G07520.3 29.452 146 99 1 379 520 323 468 1.16e-12 71.2
Msa1101960 AT1G07520.1 29.452 146 99 1 379 520 322 467 1.20e-12 71.2
Msa1101960 AT1G07520.2 29.452 146 99 1 379 520 158 303 1.32e-12 70.9
Msa1101960 AT1G07520.4 29.452 146 99 1 379 520 158 303 1.32e-12 70.9
Msa1101960 AT1G21450.1 25.683 183 116 3 349 518 193 368 1.89e-12 70.5
Msa1101960 AT3G46600.3 28.395 162 108 2 364 518 162 322 2.16e-12 70.1
Msa1101960 AT3G46600.2 29.371 143 100 1 376 518 5 146 3.00e-12 68.9
Msa1101960 AT4G37650.1 31.081 148 93 2 376 516 147 292 4.08e-12 69.3
Msa1101960 AT1G66350.1 29.655 145 94 3 372 515 152 289 5.62e-12 68.6
Msa1101960 AT1G50600.3 29.861 144 99 2 376 518 160 302 1.46e-11 67.4
Msa1101960 AT1G50600.2 29.861 144 99 2 376 518 235 377 2.35e-11 67.0
Msa1101960 AT1G50600.1 29.861 144 99 2 376 518 231 373 2.36e-11 67.0
Msa1101960 AT1G07530.1 27.778 144 103 1 376 518 397 540 2.76e-11 67.0

Find 107 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTGTGAAGAACTGAAATT+AGG 0.187840 7_3:+33381505 None:intergenic
GGAAAAGGTGTGTTAGATTT+TGG 0.194202 7_3:-33382138 Msa1101960:CDS
TTGTTACCATTTGAAGAAAT+AGG 0.224501 7_3:+33381637 None:intergenic
ATTTGTTCTGATTTCCCTTT+TGG 0.265105 7_3:-33381556 Msa1101960:CDS
TTCCATTATCAATTTCAATA+TGG 0.276508 7_3:+33381786 None:intergenic
AATTCCGAAGATACCCTTCT+TGG 0.278051 7_3:-33381263 Msa1101960:CDS
TTCCATATTGAAATTGATAA+TGG 0.285700 7_3:-33381788 Msa1101960:CDS
GCTTCCCCATAGGAGAAATT+TGG 0.291304 7_3:+33380975 None:intergenic
GCATAAACTGAGCTTGGTTT+TGG 0.318676 7_3:+33381392 None:intergenic
TCTTCGCCGCCACCACTTCC+AGG 0.321559 7_3:+33381112 None:intergenic
GTAGGAGTGGTTTGTTGATT+TGG 0.323080 7_3:+33381982 None:intergenic
AGATATTGAAGATGCATCTA+TGG 0.323147 7_3:-33381764 Msa1101960:CDS
GTTTATGCCTAACCCTAGTT+TGG 0.334769 7_3:-33381377 Msa1101960:CDS
GAAGATACCCTTCTTGGATT+CGG 0.340738 7_3:-33381257 Msa1101960:CDS
AATGGCGCCTAAGCAGAAAA+TGG 0.344322 7_3:-33381140 Msa1101960:CDS
GGAACACGCGCAAGGGATAT+TGG 0.347128 7_3:-33381011 Msa1101960:CDS
CAACAAGATGTTGAATTCAA+TGG 0.350188 7_3:-33381697 Msa1101960:CDS
CTTGTGAAGAACTGAAATTA+GGG 0.351845 7_3:+33381506 None:intergenic
CAGCATCAACAACAATCAAT+TGG 0.353717 7_3:-33381454 Msa1101960:CDS
AAGATACCCTTCTTGGATTC+GGG 0.361865 7_3:-33381256 Msa1101960:CDS
TGTTACCATTTGAAGAAATA+GGG 0.362144 7_3:+33381638 None:intergenic
CGGGTCAAGAGATGTTTCTT+AGG 0.388186 7_3:-33381237 Msa1101960:CDS
CAATCACCAAATTTCTCCTA+TGG 0.395643 7_3:-33380981 Msa1101960:CDS
TATGTATTCTTCAAAGGGTA+AGG 0.404339 7_3:+33382161 None:intergenic
ACTTATAGACGCCGGTAATC+CGG 0.404547 7_3:-33381032 Msa1101960:CDS
CTTGACCCTATTTCTTCAAA+TGG 0.407880 7_3:-33381643 Msa1101960:CDS
AATATCCCTTGCGCGTGTTC+CGG 0.413029 7_3:+33381013 None:intergenic
AAATTTGCAAACTGCAGAAC+AGG 0.415407 7_3:+33380806 None:intergenic
AAGATGTGGAATGGAGGATT+GGG 0.422443 7_3:-33381851 Msa1101960:CDS
TTGCGCGTGTTCCGGATTAC+CGG 0.426339 7_3:+33381021 None:intergenic
ATGGCGCCTAAGCAGAAAAT+GGG 0.433521 7_3:-33381139 Msa1101960:CDS
CCACAGCTTCAAGCAATGCT+TGG 0.439953 7_3:+33380774 None:intergenic
ATCGGTGGAAGCACCGCCTC+CGG 0.440083 7_3:+33381924 None:intergenic
ACTAGCCTCTTGCTCAAGAT+TGG 0.445518 7_3:-33380857 Msa1101960:CDS
GGGAACCCTGGAAGTGGTGG+CGG 0.447345 7_3:-33381118 Msa1101960:CDS
TTTCCTATGTATTCTTCAAA+GGG 0.453051 7_3:+33382156 None:intergenic
AAAGATGTGGAATGGAGGAT+TGG 0.456441 7_3:-33381852 Msa1101960:CDS
GAGGCTGAAGCTGAATCTCT+TGG 0.460878 7_3:+33381320 None:intergenic
TTCATCCCTCTACTACCAAA+AGG 0.463150 7_3:+33381541 None:intergenic
TCACAAGTTTCACTTTCTCA+TGG 0.465348 7_3:-33381490 Msa1101960:CDS
GGTTAGGCATAAACTGAGCT+TGG 0.478491 7_3:+33381386 None:intergenic
AGGGAAAATTGTTGCTATGC+GGG 0.481377 7_3:-33382045 Msa1101960:CDS
AGCTTCAAGCAATGCTTGGT+TGG 0.488113 7_3:+33380778 None:intergenic
TTTGAAGAATACATAGGAAA+AGG 0.490303 7_3:-33382153 Msa1101960:CDS
AGCATCAACAACAATCAATT+GGG 0.491428 7_3:-33381453 Msa1101960:CDS
TGCAGCGCCGGTGGTGCTAT+CGG 0.493887 7_3:+33381906 None:intergenic
ACGCGATTGCGAAGCAGTTG+TGG 0.497464 7_3:-33380486 Msa1101960:CDS
ATCTTGAGCAAGAGGCTAGT+TGG 0.505941 7_3:+33380860 None:intergenic
AATCACCAAATTTCTCCTAT+GGG 0.509811 7_3:-33380980 Msa1101960:CDS
GAATCCAAGAAGGGTATCTT+CGG 0.510787 7_3:+33381259 None:intergenic
ACAATGGTCTTCATTTATGC+AGG 0.517675 7_3:-33380702 Msa1101960:CDS
TTACCCTTTGAAGAATACAT+AGG 0.522370 7_3:-33382159 Msa1101960:CDS
CCAAGCATTGCTTGAAGCTG+TGG 0.524919 7_3:-33380774 Msa1101960:CDS
TCACACGGTAGCGCCGGAGG+CGG 0.529366 7_3:-33381937 Msa1101960:CDS
TCATCCCTCTACTACCAAAA+GGG 0.532544 7_3:+33381542 None:intergenic
GACAGTGTTGAGGATGAAGT+AGG 0.538311 7_3:+33381964 None:intergenic
CTCTTGACCCGAATCCAAGA+AGG 0.539089 7_3:+33381249 None:intergenic
CTCGATTTCATCGTGGTGTG+AGG 0.543940 7_3:+33380622 None:intergenic
GATATTGAAGATGCATCTAT+GGG 0.546979 7_3:-33381763 Msa1101960:CDS
AAGCACCAATCTTGAGCAAG+AGG 0.549041 7_3:+33380852 None:intergenic
CTTTGAAAAGGCTTCCCCAT+AGG 0.549307 7_3:+33380965 None:intergenic
CAAGTTTCACTTTCTCATGG+TGG 0.549648 7_3:-33381487 Msa1101960:CDS
TTTGTTGGCTGCAGCGCCGG+TGG 0.552938 7_3:+33381897 None:intergenic
ATGGGGAACCCTGGAAGTGG+TGG 0.554892 7_3:-33381121 Msa1101960:CDS
CCATTGGCCTATGCTGCAGA+TGG 0.558131 7_3:+33381158 None:intergenic
TGTTGAGGATGAAGTAGGAG+TGG 0.560505 7_3:+33381969 None:intergenic
AACAGAAGAAGAATCAATGC+TGG 0.562661 7_3:+33381600 None:intergenic
GTCAAGAGATGTTTCTTAGG+AGG 0.562943 7_3:-33381234 Msa1101960:CDS
CTTCGCCGCCACCACTTCCA+GGG 0.563774 7_3:+33381113 None:intergenic
GAATGATCTTGATCTTGACT+TGG 0.565052 7_3:+33381808 None:intergenic
AAGCAGAAAATGGGGAACCC+TGG 0.568423 7_3:-33381130 Msa1101960:CDS
TTCCTCACCATCTGCAGCAT+AGG 0.569164 7_3:-33381165 Msa1101960:CDS
TCCTCACACGGTAGCGCCGG+AGG 0.569283 7_3:-33381940 Msa1101960:CDS
TGGTGGCGGCGAAGATGTGT+CGG 0.570313 7_3:-33381104 Msa1101960:CDS
TCTTCCTCACACGGTAGCGC+CGG 0.570460 7_3:-33381943 Msa1101960:CDS
GAGAATCTGAAGCAATATGC+TGG 0.570600 7_3:-33380584 Msa1101960:intron
GGTAATCCGGAACACGCGCA+AGG 0.576781 7_3:-33381019 Msa1101960:CDS
AAAATGGGGAACCCTGGAAG+TGG 0.581437 7_3:-33381124 Msa1101960:CDS
GCATTGCTTGAAGCTGTGGA+AGG 0.584725 7_3:-33380770 Msa1101960:CDS
CCATCTGCAGCATAGGCCAA+TGG 0.588621 7_3:-33381158 Msa1101960:CDS
GTCGGCGCATCAGTTTCAGC+AGG 0.589273 7_3:-33381086 Msa1101960:CDS
TGCAGCTGAGAATATGTGAA+AGG 0.595086 7_3:+33381349 None:intergenic
TCGATTTCATCGTGGTGTGA+GGG 0.600208 7_3:+33380623 None:intergenic
ATGTATTCTTCAAAGGGTAA+GGG 0.603369 7_3:+33382162 None:intergenic
TTATGCAGGAGTTAGCACTA+AGG 0.606201 7_3:-33380688 Msa1101960:CDS
TGAAGGTAAAAGATGTGGAA+TGG 0.609884 7_3:-33381860 Msa1101960:CDS
GCTTCCACCGATAGCACCAC+CGG 0.612925 7_3:-33381913 Msa1101960:CDS
CAAGCTGAAGGTAAAAGATG+TGG 0.613564 7_3:-33381865 Msa1101960:CDS
AGCGCCGGTGGTGCTATCGG+TGG 0.615613 7_3:+33381909 None:intergenic
AGGTAAAAGATGTGGAATGG+AGG 0.623374 7_3:-33381857 Msa1101960:CDS
CAGGAGTTAGCACTAAGGAA+TGG 0.623926 7_3:-33380683 Msa1101960:CDS
GGCCTATGCTGCAGATGGTG+AGG 0.630076 7_3:+33381163 None:intergenic
TCTTGACCCGAATCCAAGAA+GGG 0.632079 7_3:+33381250 None:intergenic
ATCACCAAATTTCTCCTATG+GGG 0.632427 7_3:-33380979 Msa1101960:CDS
TCAACACTGTCTTCCTCACA+CGG 0.633334 7_3:-33381952 Msa1101960:CDS
ACGCGCAAGGGATATTGGCG+CGG 0.634995 7_3:-33381006 Msa1101960:CDS
TGGTTCATAACAAACTGATG+AGG 0.638887 7_3:+33381412 None:intergenic
GTAATCCGGAACACGCGCAA+GGG 0.641709 7_3:-33381018 Msa1101960:CDS
ACTGCTTCGCAATCGCGTAG+TGG 0.643756 7_3:+33380491 None:intergenic
AATGCAGTGATCTTGAGTGC+AGG 0.644744 7_3:+33380653 None:intergenic
GAGGGAAAATTGTTGCTATG+CGG 0.647727 7_3:-33382046 Msa1101960:CDS
GAGTTAGCACTAAGGAATGG+TGG 0.649571 7_3:-33380680 Msa1101960:CDS
CCAGCTAAAAGACTCAATTG+TGG 0.675226 7_3:-33381298 Msa1101960:CDS
TGGCGCCTAAGCAGAAAATG+GGG 0.679052 7_3:-33381138 Msa1101960:CDS
GCTGCAGAACTTATAGACGC+CGG 0.689078 7_3:-33381040 Msa1101960:CDS
AACTGAGCTCGATTTCATCG+TGG 0.743210 7_3:+33380615 None:intergenic
GTGTGAGGAAGACAGTGTTG+AGG 0.783398 7_3:+33381954 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCCATATTGAAATTGATAA+TGG - chr7_3:33380868-33380887 Msa1101960:CDS 20.0%
!! TTCCATTATCAATTTCAATA+TGG + chr7_3:33380873-33380892 None:intergenic 20.0%
!!! ATTCAATGGTTTTAGTTTTA+TGG - chr7_3:33380973-33380992 Msa1101960:CDS 20.0%
!!! CACATAATAGATTTTGATAT+TGG - chr7_3:33381922-33381941 Msa1101960:CDS 20.0%
!!! ATAGATTTTGATATTGGTTT+TGG - chr7_3:33381928-33381947 Msa1101960:CDS 20.0%
!! TTCCATATTGAAATTGATAA+TGG - chr7_3:33380868-33380887 Msa1101960:CDS 20.0%
!! TTCCATTATCAATTTCAATA+TGG + chr7_3:33380873-33380892 None:intergenic 20.0%
!!! ATTCAATGGTTTTAGTTTTA+TGG - chr7_3:33380973-33380992 Msa1101960:CDS 20.0%
!!! CACATAATAGATTTTGATAT+TGG - chr7_3:33381922-33381941 Msa1101960:CDS 20.0%
!!! ATAGATTTTGATATTGGTTT+TGG - chr7_3:33381928-33381947 Msa1101960:CDS 20.0%
! TTTCCTATGTATTCTTCAAA+GGG + chr7_3:33380503-33380522 None:intergenic 25.0%
!! TTTTCCTATGTATTCTTCAA+AGG + chr7_3:33380504-33380523 None:intergenic 25.0%
! TTTGAAGAATACATAGGAAA+AGG - chr7_3:33380503-33380522 Msa1101960:intron 25.0%
! TCAAAAACAACAACAGAATT+GGG + chr7_3:33380644-33380663 None:intergenic 25.0%
!!! TTTGTTGATTTGGTTTTTTG+AGG + chr7_3:33380667-33380686 None:intergenic 25.0%
! TGTTACCATTTGAAGAAATA+GGG + chr7_3:33381021-33381040 None:intergenic 25.0%
! TTGTTACCATTTGAAGAAAT+AGG + chr7_3:33381022-33381041 None:intergenic 25.0%
!! TATAATTGATCAGCTTTTCA+AGG - chr7_3:33381594-33381613 Msa1101960:CDS 25.0%
!!! AAGGTCTGCTTTTTATTTTA+AGG - chr7_3:33381711-33381730 Msa1101960:CDS 25.0%
! TTTCCTATGTATTCTTCAAA+GGG + chr7_3:33380503-33380522 None:intergenic 25.0%
!! TTTTCCTATGTATTCTTCAA+AGG + chr7_3:33380504-33380523 None:intergenic 25.0%
! TTTGAAGAATACATAGGAAA+AGG - chr7_3:33380503-33380522 Msa1101960:intron 25.0%
! TCAAAAACAACAACAGAATT+GGG + chr7_3:33380644-33380663 None:intergenic 25.0%
!!! TTTGTTGATTTGGTTTTTTG+AGG + chr7_3:33380667-33380686 None:intergenic 25.0%
! TGTTACCATTTGAAGAAATA+GGG + chr7_3:33381021-33381040 None:intergenic 25.0%
! TTGTTACCATTTGAAGAAAT+AGG + chr7_3:33381022-33381041 None:intergenic 25.0%
!! TATAATTGATCAGCTTTTCA+AGG - chr7_3:33381594-33381613 Msa1101960:CDS 25.0%
!!! AAGGTCTGCTTTTTATTTTA+AGG - chr7_3:33381711-33381730 Msa1101960:CDS 25.0%
ATGTATTCTTCAAAGGGTAA+GGG + chr7_3:33380497-33380516 None:intergenic 30.0%
TATGTATTCTTCAAAGGGTA+AGG + chr7_3:33380498-33380517 None:intergenic 30.0%
! TTACCCTTTGAAGAATACAT+AGG - chr7_3:33380497-33380516 Msa1101960:intron 30.0%
GTCAAAAACAACAACAGAAT+TGG + chr7_3:33380645-33380664 None:intergenic 30.0%
AGATATTGAAGATGCATCTA+TGG - chr7_3:33380892-33380911 Msa1101960:CDS 30.0%
GATATTGAAGATGCATCTAT+GGG - chr7_3:33380893-33380912 Msa1101960:CDS 30.0%
! TTAAGCAAGCTTTTACATGT+TGG - chr7_3:33380917-33380936 Msa1101960:CDS 30.0%
CAACAAGATGTTGAATTCAA+TGG - chr7_3:33380959-33380978 Msa1101960:CDS 30.0%
! ATTTGTTCTGATTTCCCTTT+TGG - chr7_3:33381100-33381119 Msa1101960:CDS 30.0%
CTTGTGAAGAACTGAAATTA+GGG + chr7_3:33381153-33381172 None:intergenic 30.0%
ACTTGTGAAGAACTGAAATT+AGG + chr7_3:33381154-33381173 None:intergenic 30.0%
AGCATCAACAACAATCAATT+GGG - chr7_3:33381203-33381222 Msa1101960:CDS 30.0%
TGAAAGGAAAAACCAAACTA+GGG + chr7_3:33381294-33381313 None:intergenic 30.0%
AATCACCAAATTTCTCCTAT+GGG - chr7_3:33381676-33381695 Msa1101960:CDS 30.0%
! TAAAAAGCAGACCTTTGAAA+AGG + chr7_3:33381706-33381725 None:intergenic 30.0%
!!! GTCTGCTTTTTATTTTAAGG+AGG - chr7_3:33381714-33381733 Msa1101960:CDS 30.0%
!!! GATTTTGATATTGGTTTTGG+TGG - chr7_3:33381931-33381950 Msa1101960:CDS 30.0%
ATGTATTCTTCAAAGGGTAA+GGG + chr7_3:33380497-33380516 None:intergenic 30.0%
TATGTATTCTTCAAAGGGTA+AGG + chr7_3:33380498-33380517 None:intergenic 30.0%
! TTACCCTTTGAAGAATACAT+AGG - chr7_3:33380497-33380516 Msa1101960:intron 30.0%
GTCAAAAACAACAACAGAAT+TGG + chr7_3:33380645-33380664 None:intergenic 30.0%
AGATATTGAAGATGCATCTA+TGG - chr7_3:33380892-33380911 Msa1101960:CDS 30.0%
GATATTGAAGATGCATCTAT+GGG - chr7_3:33380893-33380912 Msa1101960:CDS 30.0%
! TTAAGCAAGCTTTTACATGT+TGG - chr7_3:33380917-33380936 Msa1101960:CDS 30.0%
CAACAAGATGTTGAATTCAA+TGG - chr7_3:33380959-33380978 Msa1101960:CDS 30.0%
! ATTTGTTCTGATTTCCCTTT+TGG - chr7_3:33381100-33381119 Msa1101960:CDS 30.0%
CTTGTGAAGAACTGAAATTA+GGG + chr7_3:33381153-33381172 None:intergenic 30.0%
ACTTGTGAAGAACTGAAATT+AGG + chr7_3:33381154-33381173 None:intergenic 30.0%
AGCATCAACAACAATCAATT+GGG - chr7_3:33381203-33381222 Msa1101960:CDS 30.0%
TGAAAGGAAAAACCAAACTA+GGG + chr7_3:33381294-33381313 None:intergenic 30.0%
AATCACCAAATTTCTCCTAT+GGG - chr7_3:33381676-33381695 Msa1101960:CDS 30.0%
! TAAAAAGCAGACCTTTGAAA+AGG + chr7_3:33381706-33381725 None:intergenic 30.0%
!!! GTCTGCTTTTTATTTTAAGG+AGG - chr7_3:33381714-33381733 Msa1101960:CDS 30.0%
!!! GATTTTGATATTGGTTTTGG+TGG - chr7_3:33381931-33381950 Msa1101960:CDS 30.0%
!! GGAAAAGGTGTGTTAGATTT+TGG - chr7_3:33380518-33380537 Msa1101960:intron 35.0%
! AGCAAGAACAGTTTTTGCAA+AGG - chr7_3:33380585-33380604 Msa1101960:CDS 35.0%
! AAGAACAGTTTTTGCAAAGG+TGG - chr7_3:33380588-33380607 Msa1101960:CDS 35.0%
!! AGCTTGTGGTATGTTTTTGT+TGG + chr7_3:33380777-33380796 None:intergenic 35.0%
AAAAACATACCACAAGCTGA+AGG - chr7_3:33380779-33380798 Msa1101960:CDS 35.0%
TGAAGGTAAAAGATGTGGAA+TGG - chr7_3:33380796-33380815 Msa1101960:CDS 35.0%
GAATGATCTTGATCTTGACT+TGG + chr7_3:33380851-33380870 None:intergenic 35.0%
! CTTGACCCTATTTCTTCAAA+TGG - chr7_3:33381013-33381032 Msa1101960:CDS 35.0%
AACAGAAGAAGAATCAATGC+TGG + chr7_3:33381059-33381078 None:intergenic 35.0%
!! ATTTCCCTTTTGGTAGTAGA+GGG - chr7_3:33381110-33381129 Msa1101960:CDS 35.0%
TCACAAGTTTCACTTTCTCA+TGG - chr7_3:33381166-33381185 Msa1101960:CDS 35.0%
CAGCATCAACAACAATCAAT+TGG - chr7_3:33381202-33381221 Msa1101960:CDS 35.0%
TGGTTCATAACAAACTGATG+AGG + chr7_3:33381247-33381266 None:intergenic 35.0%
GTGAAAGGAAAAACCAAACT+AGG + chr7_3:33381295-33381314 None:intergenic 35.0%
CAATCACCAAATTTCTCCTA+TGG - chr7_3:33381675-33381694 Msa1101960:CDS 35.0%
ATCACCAAATTTCTCCTATG+GGG - chr7_3:33381677-33381696 Msa1101960:CDS 35.0%
AAATTTGCAAACTGCAGAAC+AGG + chr7_3:33381853-33381872 None:intergenic 35.0%
!!! ATATTGGTTTTGGTGGACAA+TGG - chr7_3:33381938-33381957 Msa1101960:CDS 35.0%
ACAATGGTCTTCATTTATGC+AGG - chr7_3:33381954-33381973 Msa1101960:CDS 35.0%
AGTCTCTGAATTCTGTTTCA+TGG - chr7_3:33382136-33382155 Msa1101960:CDS 35.0%
!! GGAAAAGGTGTGTTAGATTT+TGG - chr7_3:33380518-33380537 Msa1101960:intron 35.0%
! AGCAAGAACAGTTTTTGCAA+AGG - chr7_3:33380585-33380604 Msa1101960:CDS 35.0%
! AAGAACAGTTTTTGCAAAGG+TGG - chr7_3:33380588-33380607 Msa1101960:CDS 35.0%
!! AGCTTGTGGTATGTTTTTGT+TGG + chr7_3:33380777-33380796 None:intergenic 35.0%
AAAAACATACCACAAGCTGA+AGG - chr7_3:33380779-33380798 Msa1101960:CDS 35.0%
TGAAGGTAAAAGATGTGGAA+TGG - chr7_3:33380796-33380815 Msa1101960:CDS 35.0%
GAATGATCTTGATCTTGACT+TGG + chr7_3:33380851-33380870 None:intergenic 35.0%
! CTTGACCCTATTTCTTCAAA+TGG - chr7_3:33381013-33381032 Msa1101960:CDS 35.0%
AACAGAAGAAGAATCAATGC+TGG + chr7_3:33381059-33381078 None:intergenic 35.0%
!! ATTTCCCTTTTGGTAGTAGA+GGG - chr7_3:33381110-33381129 Msa1101960:CDS 35.0%
TCACAAGTTTCACTTTCTCA+TGG - chr7_3:33381166-33381185 Msa1101960:CDS 35.0%
CAGCATCAACAACAATCAAT+TGG - chr7_3:33381202-33381221 Msa1101960:CDS 35.0%
TGGTTCATAACAAACTGATG+AGG + chr7_3:33381247-33381266 None:intergenic 35.0%
GTGAAAGGAAAAACCAAACT+AGG + chr7_3:33381295-33381314 None:intergenic 35.0%
CAATCACCAAATTTCTCCTA+TGG - chr7_3:33381675-33381694 Msa1101960:CDS 35.0%
ATCACCAAATTTCTCCTATG+GGG - chr7_3:33381677-33381696 Msa1101960:CDS 35.0%
AAATTTGCAAACTGCAGAAC+AGG + chr7_3:33381853-33381872 None:intergenic 35.0%
!!! ATATTGGTTTTGGTGGACAA+TGG - chr7_3:33381938-33381957 Msa1101960:CDS 35.0%
ACAATGGTCTTCATTTATGC+AGG - chr7_3:33381954-33381973 Msa1101960:CDS 35.0%
AGTCTCTGAATTCTGTTTCA+TGG - chr7_3:33382136-33382155 Msa1101960:CDS 35.0%
! AACAGTTTTTGCAAAGGTGG+AGG - chr7_3:33380591-33380610 Msa1101960:CDS 40.0%
! ACAGTTTTTGCAAAGGTGGA+GGG - chr7_3:33380592-33380611 Msa1101960:CDS 40.0%
GAGGGAAAATTGTTGCTATG+CGG - chr7_3:33380610-33380629 Msa1101960:CDS 40.0%
AGGGAAAATTGTTGCTATGC+GGG - chr7_3:33380611-33380630 Msa1101960:CDS 40.0%
!! GTAGGAGTGGTTTGTTGATT+TGG + chr7_3:33380677-33380696 None:intergenic 40.0%
! CATCTTTTACCTTCAGCTTG+TGG + chr7_3:33380791-33380810 None:intergenic 40.0%
CAAGCTGAAGGTAAAAGATG+TGG - chr7_3:33380791-33380810 Msa1101960:CDS 40.0%
AGGTAAAAGATGTGGAATGG+AGG - chr7_3:33380799-33380818 Msa1101960:CDS 40.0%
AAAGATGTGGAATGGAGGAT+TGG - chr7_3:33380804-33380823 Msa1101960:CDS 40.0%
AAGATGTGGAATGGAGGATT+GGG - chr7_3:33380805-33380824 Msa1101960:CDS 40.0%
!! GATTTCCCTTTTGGTAGTAG+AGG - chr7_3:33381109-33381128 Msa1101960:CDS 40.0%
TCATCCCTCTACTACCAAAA+GGG + chr7_3:33381117-33381136 None:intergenic 40.0%
TTCATCCCTCTACTACCAAA+AGG + chr7_3:33381118-33381137 None:intergenic 40.0%
CAAGTTTCACTTTCTCATGG+TGG - chr7_3:33381169-33381188 Msa1101960:CDS 40.0%
! GCATAAACTGAGCTTGGTTT+TGG + chr7_3:33381267-33381286 None:intergenic 40.0%
GTTTATGCCTAACCCTAGTT+TGG - chr7_3:33381279-33381298 Msa1101960:CDS 40.0%
GGAAAAACCAAACTAGGGTT+AGG + chr7_3:33381289-33381308 None:intergenic 40.0%
TGCAGCTGAGAATATGTGAA+AGG + chr7_3:33381310-33381329 None:intergenic 40.0%
!! CAATTGAGTCTTTTAGCTGG+AGG + chr7_3:33381358-33381377 None:intergenic 40.0%
! CCACAATTGAGTCTTTTAGC+TGG + chr7_3:33381361-33381380 None:intergenic 40.0%
CCAGCTAAAAGACTCAATTG+TGG - chr7_3:33381358-33381377 Msa1101960:CDS 40.0%
AATTCCGAAGATACCCTTCT+TGG - chr7_3:33381393-33381412 Msa1101960:CDS 40.0%
!! GAATCCAAGAAGGGTATCTT+CGG + chr7_3:33381400-33381419 None:intergenic 40.0%
GAAGATACCCTTCTTGGATT+CGG - chr7_3:33381399-33381418 Msa1101960:CDS 40.0%
AAGATACCCTTCTTGGATTC+GGG - chr7_3:33381400-33381419 Msa1101960:CDS 40.0%
GTCAAGAGATGTTTCTTAGG+AGG - chr7_3:33381422-33381441 Msa1101960:CDS 40.0%
TTATGCAGGAGTTAGCACTA+AGG - chr7_3:33381968-33381987 Msa1101960:CDS 40.0%
! GAGAATCTGAAGCAATATGC+TGG - chr7_3:33382072-33382091 Msa1101960:CDS 40.0%
! AACAGTTTTTGCAAAGGTGG+AGG - chr7_3:33380591-33380610 Msa1101960:CDS 40.0%
! ACAGTTTTTGCAAAGGTGGA+GGG - chr7_3:33380592-33380611 Msa1101960:CDS 40.0%
GAGGGAAAATTGTTGCTATG+CGG - chr7_3:33380610-33380629 Msa1101960:CDS 40.0%
AGGGAAAATTGTTGCTATGC+GGG - chr7_3:33380611-33380630 Msa1101960:CDS 40.0%
!! GTAGGAGTGGTTTGTTGATT+TGG + chr7_3:33380677-33380696 None:intergenic 40.0%
! CATCTTTTACCTTCAGCTTG+TGG + chr7_3:33380791-33380810 None:intergenic 40.0%
CAAGCTGAAGGTAAAAGATG+TGG - chr7_3:33380791-33380810 Msa1101960:CDS 40.0%
AGGTAAAAGATGTGGAATGG+AGG - chr7_3:33380799-33380818 Msa1101960:CDS 40.0%
AAAGATGTGGAATGGAGGAT+TGG - chr7_3:33380804-33380823 Msa1101960:CDS 40.0%
AAGATGTGGAATGGAGGATT+GGG - chr7_3:33380805-33380824 Msa1101960:CDS 40.0%
!! GATTTCCCTTTTGGTAGTAG+AGG - chr7_3:33381109-33381128 Msa1101960:CDS 40.0%
TCATCCCTCTACTACCAAAA+GGG + chr7_3:33381117-33381136 None:intergenic 40.0%
TTCATCCCTCTACTACCAAA+AGG + chr7_3:33381118-33381137 None:intergenic 40.0%
CAAGTTTCACTTTCTCATGG+TGG - chr7_3:33381169-33381188 Msa1101960:CDS 40.0%
! GCATAAACTGAGCTTGGTTT+TGG + chr7_3:33381267-33381286 None:intergenic 40.0%
GTTTATGCCTAACCCTAGTT+TGG - chr7_3:33381279-33381298 Msa1101960:CDS 40.0%
GGAAAAACCAAACTAGGGTT+AGG + chr7_3:33381289-33381308 None:intergenic 40.0%
TGCAGCTGAGAATATGTGAA+AGG + chr7_3:33381310-33381329 None:intergenic 40.0%
!! CAATTGAGTCTTTTAGCTGG+AGG + chr7_3:33381358-33381377 None:intergenic 40.0%
! CCACAATTGAGTCTTTTAGC+TGG + chr7_3:33381361-33381380 None:intergenic 40.0%
CCAGCTAAAAGACTCAATTG+TGG - chr7_3:33381358-33381377 Msa1101960:CDS 40.0%
AATTCCGAAGATACCCTTCT+TGG - chr7_3:33381393-33381412 Msa1101960:CDS 40.0%
!! GAATCCAAGAAGGGTATCTT+CGG + chr7_3:33381400-33381419 None:intergenic 40.0%
GAAGATACCCTTCTTGGATT+CGG - chr7_3:33381399-33381418 Msa1101960:CDS 40.0%
AAGATACCCTTCTTGGATTC+GGG - chr7_3:33381400-33381419 Msa1101960:CDS 40.0%
GTCAAGAGATGTTTCTTAGG+AGG - chr7_3:33381422-33381441 Msa1101960:CDS 40.0%
TTATGCAGGAGTTAGCACTA+AGG - chr7_3:33381968-33381987 Msa1101960:CDS 40.0%
! GAGAATCTGAAGCAATATGC+TGG - chr7_3:33382072-33382091 Msa1101960:CDS 40.0%
TGTTGAGGATGAAGTAGGAG+TGG + chr7_3:33380690-33380709 None:intergenic 45.0%
! GACAGTGTTGAGGATGAAGT+AGG + chr7_3:33380695-33380714 None:intergenic 45.0%
TCAACACTGTCTTCCTCACA+CGG - chr7_3:33380704-33380723 Msa1101960:CDS 45.0%
GGTTAGGCATAAACTGAGCT+TGG + chr7_3:33381273-33381292 None:intergenic 45.0%
TCTTGACCCGAATCCAAGAA+GGG + chr7_3:33381409-33381428 None:intergenic 45.0%
CGGGTCAAGAGATGTTTCTT+AGG - chr7_3:33381419-33381438 Msa1101960:CDS 45.0%
! ATTTTCTGCTTAGGCGCCAT+TGG + chr7_3:33381517-33381536 None:intergenic 45.0%
AATGGCGCCTAAGCAGAAAA+TGG - chr7_3:33381516-33381535 Msa1101960:CDS 45.0%
ATGGCGCCTAAGCAGAAAAT+GGG - chr7_3:33381517-33381536 Msa1101960:CDS 45.0%
ACTTATAGACGCCGGTAATC+CGG - chr7_3:33381624-33381643 Msa1101960:CDS 45.0%
GCTTCCCCATAGGAGAAATT+TGG + chr7_3:33381684-33381703 None:intergenic 45.0%
! CTTTGAAAAGGCTTCCCCAT+AGG + chr7_3:33381694-33381713 None:intergenic 45.0%
! CTATGGGGAAGCCTTTTCAA+AGG - chr7_3:33381692-33381711 Msa1101960:CDS 45.0%
ATCTTGAGCAAGAGGCTAGT+TGG + chr7_3:33381799-33381818 None:intergenic 45.0%
! ACTAGCCTCTTGCTCAAGAT+TGG - chr7_3:33381799-33381818 Msa1101960:CDS 45.0%
AAGCACCAATCTTGAGCAAG+AGG + chr7_3:33381807-33381826 None:intergenic 45.0%
AGCTTCAAGCAATGCTTGGT+TGG + chr7_3:33381881-33381900 None:intergenic 45.0%
CAGGAGTTAGCACTAAGGAA+TGG - chr7_3:33381973-33381992 Msa1101960:CDS 45.0%
GAGTTAGCACTAAGGAATGG+TGG - chr7_3:33381976-33381995 Msa1101960:CDS 45.0%
AATGCAGTGATCTTGAGTGC+AGG + chr7_3:33382006-33382025 None:intergenic 45.0%
TCGATTTCATCGTGGTGTGA+GGG + chr7_3:33382036-33382055 None:intergenic 45.0%
AACTGAGCTCGATTTCATCG+TGG + chr7_3:33382044-33382063 None:intergenic 45.0%
TGTTGAGGATGAAGTAGGAG+TGG + chr7_3:33380690-33380709 None:intergenic 45.0%
! GACAGTGTTGAGGATGAAGT+AGG + chr7_3:33380695-33380714 None:intergenic 45.0%
TCAACACTGTCTTCCTCACA+CGG - chr7_3:33380704-33380723 Msa1101960:CDS 45.0%
GGTTAGGCATAAACTGAGCT+TGG + chr7_3:33381273-33381292 None:intergenic 45.0%
TCTTGACCCGAATCCAAGAA+GGG + chr7_3:33381409-33381428 None:intergenic 45.0%
CGGGTCAAGAGATGTTTCTT+AGG - chr7_3:33381419-33381438 Msa1101960:CDS 45.0%
! ATTTTCTGCTTAGGCGCCAT+TGG + chr7_3:33381517-33381536 None:intergenic 45.0%
AATGGCGCCTAAGCAGAAAA+TGG - chr7_3:33381516-33381535 Msa1101960:CDS 45.0%
ATGGCGCCTAAGCAGAAAAT+GGG - chr7_3:33381517-33381536 Msa1101960:CDS 45.0%
ACTTATAGACGCCGGTAATC+CGG - chr7_3:33381624-33381643 Msa1101960:CDS 45.0%
GCTTCCCCATAGGAGAAATT+TGG + chr7_3:33381684-33381703 None:intergenic 45.0%
! CTTTGAAAAGGCTTCCCCAT+AGG + chr7_3:33381694-33381713 None:intergenic 45.0%
! CTATGGGGAAGCCTTTTCAA+AGG - chr7_3:33381692-33381711 Msa1101960:CDS 45.0%
ATCTTGAGCAAGAGGCTAGT+TGG + chr7_3:33381799-33381818 None:intergenic 45.0%
! ACTAGCCTCTTGCTCAAGAT+TGG - chr7_3:33381799-33381818 Msa1101960:CDS 45.0%
AAGCACCAATCTTGAGCAAG+AGG + chr7_3:33381807-33381826 None:intergenic 45.0%
AGCTTCAAGCAATGCTTGGT+TGG + chr7_3:33381881-33381900 None:intergenic 45.0%
CAGGAGTTAGCACTAAGGAA+TGG - chr7_3:33381973-33381992 Msa1101960:CDS 45.0%
GAGTTAGCACTAAGGAATGG+TGG - chr7_3:33381976-33381995 Msa1101960:CDS 45.0%
AATGCAGTGATCTTGAGTGC+AGG + chr7_3:33382006-33382025 None:intergenic 45.0%
TCGATTTCATCGTGGTGTGA+GGG + chr7_3:33382036-33382055 None:intergenic 45.0%
AACTGAGCTCGATTTCATCG+TGG + chr7_3:33382044-33382063 None:intergenic 45.0%
GTGTGAGGAAGACAGTGTTG+AGG + chr7_3:33380705-33380724 None:intergenic 50.0%
GAGGCTGAAGCTGAATCTCT+TGG + chr7_3:33381339-33381358 None:intergenic 50.0%
CTCTTGACCCGAATCCAAGA+AGG + chr7_3:33381410-33381429 None:intergenic 50.0%
TTCCTCACCATCTGCAGCAT+AGG - chr7_3:33381491-33381510 Msa1101960:CDS 50.0%
TGGCGCCTAAGCAGAAAATG+GGG - chr7_3:33381518-33381537 Msa1101960:CDS 50.0%
! GGGTTCCCCATTTTCTGCTT+AGG + chr7_3:33381526-33381545 None:intergenic 50.0%
AAGCAGAAAATGGGGAACCC+TGG - chr7_3:33381526-33381545 Msa1101960:CDS 50.0%
AAAATGGGGAACCCTGGAAG+TGG - chr7_3:33381532-33381551 Msa1101960:CDS 50.0%
GCTGCAGAACTTATAGACGC+CGG - chr7_3:33381616-33381635 Msa1101960:CDS 50.0%
AATATCCCTTGCGCGTGTTC+CGG + chr7_3:33381646-33381665 None:intergenic 50.0%
CCACAGCTTCAAGCAATGCT+TGG + chr7_3:33381885-33381904 None:intergenic 50.0%
! CCAAGCATTGCTTGAAGCTG+TGG - chr7_3:33381882-33381901 Msa1101960:CDS 50.0%
GCATTGCTTGAAGCTGTGGA+AGG - chr7_3:33381886-33381905 Msa1101960:CDS 50.0%
CTCGATTTCATCGTGGTGTG+AGG + chr7_3:33382037-33382056 None:intergenic 50.0%
GTGTGAGGAAGACAGTGTTG+AGG + chr7_3:33380705-33380724 None:intergenic 50.0%
GAGGCTGAAGCTGAATCTCT+TGG + chr7_3:33381339-33381358 None:intergenic 50.0%
CTCTTGACCCGAATCCAAGA+AGG + chr7_3:33381410-33381429 None:intergenic 50.0%
TTCCTCACCATCTGCAGCAT+AGG - chr7_3:33381491-33381510 Msa1101960:CDS 50.0%
TGGCGCCTAAGCAGAAAATG+GGG - chr7_3:33381518-33381537 Msa1101960:CDS 50.0%
! GGGTTCCCCATTTTCTGCTT+AGG + chr7_3:33381526-33381545 None:intergenic 50.0%
AAGCAGAAAATGGGGAACCC+TGG - chr7_3:33381526-33381545 Msa1101960:CDS 50.0%
AAAATGGGGAACCCTGGAAG+TGG - chr7_3:33381532-33381551 Msa1101960:CDS 50.0%
GCTGCAGAACTTATAGACGC+CGG - chr7_3:33381616-33381635 Msa1101960:CDS 50.0%
AATATCCCTTGCGCGTGTTC+CGG + chr7_3:33381646-33381665 None:intergenic 50.0%
CCACAGCTTCAAGCAATGCT+TGG + chr7_3:33381885-33381904 None:intergenic 50.0%
! CCAAGCATTGCTTGAAGCTG+TGG - chr7_3:33381882-33381901 Msa1101960:CDS 50.0%
GCATTGCTTGAAGCTGTGGA+AGG - chr7_3:33381886-33381905 Msa1101960:CDS 50.0%
CTCGATTTCATCGTGGTGTG+AGG + chr7_3:33382037-33382056 None:intergenic 50.0%
!! GTTTTTGTTGGCTGCAGCGC+CGG + chr7_3:33380765-33380784 None:intergenic 55.0%
! CCATTGGCCTATGCTGCAGA+TGG + chr7_3:33381501-33381520 None:intergenic 55.0%
CCATCTGCAGCATAGGCCAA+TGG - chr7_3:33381498-33381517 Msa1101960:CDS 55.0%
TTGCGCGTGTTCCGGATTAC+CGG + chr7_3:33381638-33381657 None:intergenic 55.0%
GTAATCCGGAACACGCGCAA+GGG - chr7_3:33381638-33381657 Msa1101960:CDS 55.0%
GGAACACGCGCAAGGGATAT+TGG - chr7_3:33381645-33381664 Msa1101960:CDS 55.0%
ACTGCTTCGCAATCGCGTAG+TGG + chr7_3:33382168-33382187 None:intergenic 55.0%
ACGCGATTGCGAAGCAGTTG+TGG - chr7_3:33382170-33382189 Msa1101960:CDS 55.0%
!! GTTTTTGTTGGCTGCAGCGC+CGG + chr7_3:33380765-33380784 None:intergenic 55.0%
! CCATTGGCCTATGCTGCAGA+TGG + chr7_3:33381501-33381520 None:intergenic 55.0%
CCATCTGCAGCATAGGCCAA+TGG - chr7_3:33381498-33381517 Msa1101960:CDS 55.0%
TTGCGCGTGTTCCGGATTAC+CGG + chr7_3:33381638-33381657 None:intergenic 55.0%
GTAATCCGGAACACGCGCAA+GGG - chr7_3:33381638-33381657 Msa1101960:CDS 55.0%
GGAACACGCGCAAGGGATAT+TGG - chr7_3:33381645-33381664 Msa1101960:CDS 55.0%
ACTGCTTCGCAATCGCGTAG+TGG + chr7_3:33382168-33382187 None:intergenic 55.0%
ACGCGATTGCGAAGCAGTTG+TGG - chr7_3:33382170-33382189 Msa1101960:CDS 55.0%
TCTTCCTCACACGGTAGCGC+CGG - chr7_3:33380713-33380732 Msa1101960:CDS 60.0%
GCTTCCACCGATAGCACCAC+CGG - chr7_3:33380743-33380762 Msa1101960:CDS 60.0%
GGCCTATGCTGCAGATGGTG+AGG + chr7_3:33381496-33381515 None:intergenic 60.0%
ATGGGGAACCCTGGAAGTGG+TGG - chr7_3:33381535-33381554 Msa1101960:CDS 60.0%
!! TGGTGGCGGCGAAGATGTGT+CGG - chr7_3:33381552-33381571 Msa1101960:CDS 60.0%
GTCGGCGCATCAGTTTCAGC+AGG - chr7_3:33381570-33381589 Msa1101960:CDS 60.0%
GGTAATCCGGAACACGCGCA+AGG - chr7_3:33381637-33381656 Msa1101960:CDS 60.0%
ACGCGCAAGGGATATTGGCG+CGG - chr7_3:33381650-33381669 Msa1101960:CDS 60.0%
TCGCAATCGCGTAGTGGCTG+CGG + chr7_3:33382162-33382181 None:intergenic 60.0%
TCTTCCTCACACGGTAGCGC+CGG - chr7_3:33380713-33380732 Msa1101960:CDS 60.0%
GCTTCCACCGATAGCACCAC+CGG - chr7_3:33380743-33380762 Msa1101960:CDS 60.0%
GGCCTATGCTGCAGATGGTG+AGG + chr7_3:33381496-33381515 None:intergenic 60.0%
ATGGGGAACCCTGGAAGTGG+TGG - chr7_3:33381535-33381554 Msa1101960:CDS 60.0%
!! TGGTGGCGGCGAAGATGTGT+CGG - chr7_3:33381552-33381571 Msa1101960:CDS 60.0%
GTCGGCGCATCAGTTTCAGC+AGG - chr7_3:33381570-33381589 Msa1101960:CDS 60.0%
GGTAATCCGGAACACGCGCA+AGG - chr7_3:33381637-33381656 Msa1101960:CDS 60.0%
ACGCGCAAGGGATATTGGCG+CGG - chr7_3:33381650-33381669 Msa1101960:CDS 60.0%
TCGCAATCGCGTAGTGGCTG+CGG + chr7_3:33382162-33382181 None:intergenic 60.0%
!! ATCGGTGGAAGCACCGCCTC+CGG + chr7_3:33380735-33380754 None:intergenic 65.0%
!! TGCAGCGCCGGTGGTGCTAT+CGG + chr7_3:33380753-33380772 None:intergenic 65.0%
! TTTGTTGGCTGCAGCGCCGG+TGG + chr7_3:33380762-33380781 None:intergenic 65.0%
GGGAACCCTGGAAGTGGTGG+CGG - chr7_3:33381538-33381557 Msa1101960:CDS 65.0%
CTTCGCCGCCACCACTTCCA+GGG + chr7_3:33381546-33381565 None:intergenic 65.0%
TCTTCGCCGCCACCACTTCC+AGG + chr7_3:33381547-33381566 None:intergenic 65.0%
!! ATCGGTGGAAGCACCGCCTC+CGG + chr7_3:33380735-33380754 None:intergenic 65.0%
!! TGCAGCGCCGGTGGTGCTAT+CGG + chr7_3:33380753-33380772 None:intergenic 65.0%
! TTTGTTGGCTGCAGCGCCGG+TGG + chr7_3:33380762-33380781 None:intergenic 65.0%
GGGAACCCTGGAAGTGGTGG+CGG - chr7_3:33381538-33381557 Msa1101960:CDS 65.0%
CTTCGCCGCCACCACTTCCA+GGG + chr7_3:33381546-33381565 None:intergenic 65.0%
TCTTCGCCGCCACCACTTCC+AGG + chr7_3:33381547-33381566 None:intergenic 65.0%
! TCCTCACACGGTAGCGCCGG+AGG - chr7_3:33380716-33380735 Msa1101960:CDS 70.0%
! TCACACGGTAGCGCCGGAGG+CGG - chr7_3:33380719-33380738 Msa1101960:CDS 70.0%
!! AGCGCCGGTGGTGCTATCGG+TGG + chr7_3:33380750-33380769 None:intergenic 70.0%
! TCCTCACACGGTAGCGCCGG+AGG - chr7_3:33380716-33380735 Msa1101960:CDS 70.0%
! TCACACGGTAGCGCCGGAGG+CGG - chr7_3:33380719-33380738 Msa1101960:CDS 70.0%
!! AGCGCCGGTGGTGCTATCGG+TGG + chr7_3:33380750-33380769 None:intergenic 70.0%
GCCTCCGGCGCTACCGTGTG+AGG + chr7_3:33380720-33380739 None:intergenic 75.0%
GCCTCCGGCGCTACCGTGTG+AGG + chr7_3:33380720-33380739 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 33380482 33382196 33380482 ID=Msa1101960;Name=Msa1101960
chr7_3 mRNA 33380482 33382196 33380482 ID=Msa1101960-mRNA-1;Parent=Msa1101960;Name=Msa1101960-mRNA-1;_AED=0.32;_eAED=0.33;_QI=0|0|0|1|1|1|2|0|547
chr7_3 exon 33380585 33382196 33380585 ID=Msa1101960-mRNA-1:exon:7206;Parent=Msa1101960-mRNA-1
chr7_3 exon 33380482 33380513 33380482 ID=Msa1101960-mRNA-1:exon:7205;Parent=Msa1101960-mRNA-1
chr7_3 CDS 33380585 33382196 33380585 ID=Msa1101960-mRNA-1:cds;Parent=Msa1101960-mRNA-1
chr7_3 CDS 33380482 33380513 33380482 ID=Msa1101960-mRNA-1:cds;Parent=Msa1101960-mRNA-1
Gene Sequence

>Msa1101960

ATGAAGGCTATGCCCTTACCCTTTGAAGAATACATAGGAAAAGGTGTGTTAGATTTTGGTTCAAGTGTTGTTGCTTCTTCAGATTCATATTTGTTTTCTCAACAGCAAGAACAGTTTTTGCAAAGGTGGAGGGAAAATTGTTGCTATGCGGGCATTGAGCCCAATTCTGTTGTTGTTTTTGACCTCAAAAAACCAAATCAACAAACCACTCCTACTTCATCCTCAACACTGTCTTCCTCACACGGTAGCGCCGGAGGCGGTGCTTCCACCGATAGCACCACCGGCGCTGCAGCCAACAAAAACATACCACAAGCTGAAGGTAAAAGATGTGGAATGGAGGATTGGGAGAGTGTGTTATCTGAATCACCAAGTCAAGATCAAGATCATTCCATATTGAAATTGATAATGGAAGATATTGAAGATGCATCTATGGGATTAAGCAAGCTTTTACATGTTGGAACTAGTAATTCTCATTCTCAACAAGATGTTGAATTCAATGGTTTTAGTTTTATGGATCAAGAAAGTTCTGTACTTGACCCTATTTCTTCAAATGGTAACAACAATAACTTTGTAACCAGCATTGATTCTTCTTCTGTTATTGCTACTACTGCTGCTGAGATTTGTTCTGATTTCCCTTTTGGTAGTAGAGGGATGAATCAAATTCAAAACCCTAATTTCAGTTCTTCACAAGTTTCACTTTCTCATGGTGGTTTGTTTCATCAGCATCAACAACAATCAATTGGGTCTCTTGATGAGAAACTACCTCATCAGTTTGTTATGAACCAAAACCAAGCTCAGTTTATGCCTAACCCTAGTTTGGTTTTTCCTTTCACATATTCTCAGCTGCAAGAAAACCAAGAGATTCAGCTTCAGCCTCCAGCTAAAAGACTCAATTGTGGAACGAATTATGAAATTCCGAAGATACCCTTCTTGGATTCGGGTCAAGAGATGTTTCTTAGGAGGCAACAACAGCATCAGCAACAGCAACATCAGCAGCAGCTTCAACTGCTTCCTCACCATCTGCAGCATAGGCCAATGGCGCCTAAGCAGAAAATGGGGAACCCTGGAAGTGGTGGCGGCGAAGATGTGTCGGCGCATCAGTTTCAGCAGGCTATAATTGATCAGCTTTTCAAGGCTGCAGAACTTATAGACGCCGGTAATCCGGAACACGCGCAAGGGATATTGGCGCGGCTCAATCACCAAATTTCTCCTATGGGGAAGCCTTTTCAAAGGTCTGCTTTTTATTTTAAGGAGGCATTTCAATTGCTTCTTCAATCAAATGTCAACAACAGCAACAACAACAACAGCTTTTCACCAACTAGCCTCTTGCTCAAGATTGGTGCTTATAAATCATTCTCAGAAATCTCACCTGTTCTGCAGTTTGCAAATTTCACTTCCAACCAAGCATTGCTTGAAGCTGTGGAAGGTTTCGATCGAATTCACATAATAGATTTTGATATTGGTTTTGGTGGACAATGGTCTTCATTTATGCAGGAGTTAGCACTAAGGAATGGTGGTGCACCTGCACTCAAGATCACTGCATTTGTTTCGCCCTCACACCACGATGAAATCGAGCTCAGTTTCACTAACGAGAATCTGAAGCAATATGCTGCCACTACGCGATTGCGAAGCAGTTGTGGTTAA
Protein sequence

>Msa1101960

MKAMPLPFEEYIGKGVLDFGSSVVASSDSYLFSQQQEQFLQRWRENCCYAGIEPNSVVVFDLKKPNQQTTPTSSSTLSSSHGSAGGGASTDSTTGAAANKNIPQAEGKRCGMEDWESVLSESPSQDQDHSILKLIMEDIEDASMGLSKLLHVGTSNSHSQQDVEFNGFSFMDQESSVLDPISSNGNNNNFVTSIDSSSVIATTAAEICSDFPFGSRGMNQIQNPNFSSSQVSLSHGGLFHQHQQQSIGSLDEKLPHQFVMNQNQAQFMPNPSLVFPFTYSQLQENQEIQLQPPAKRLNCGTNYEIPKIPFLDSGQEMFLRRQQQHQQQQHQQQLQLLPHHLQHRPMAPKQKMGNPGSGGGEDVSAHQFQQAIIDQLFKAAELIDAGNPEHAQGILARLNHQISPMGKPFQRSAFYFKEAFQLLLQSNVNNSNNNNSFSPTSLLLKIGAYKSFSEISPVLQFANFTSNQALLEAVEGFDRIHIIDFDIGFGGQWSSFMQELALRNGGAPALKITAFVSPSHHDEIELSFTNENLKQYAATTRLRSSCG*