AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1103160

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1103160 MtrunA17_Chr7g0233061 77.348 362 79 2 1 362 1 359 0.0 569
Msa1103160 MtrunA17_Chr7g0228481 38.983 413 186 12 1 354 1 406 3.81e-80 251
Msa1103160 MtrunA17_Chr7g0228531 38.686 411 188 11 1 353 1 405 5.92e-80 251
Msa1103160 MtrunA17_Chr7g0228401 34.732 429 171 8 36 358 59 484 3.95e-67 219
Msa1103160 MtrunA17_Chr3g0117511 56.849 146 60 1 170 315 173 315 5.69e-49 171
Msa1103160 MtrunA17_Chr4g0058991 55.797 138 58 1 174 311 203 337 2.61e-46 164
Msa1103160 MtrunA17_Chr7g0233161 36.296 270 129 4 4 231 82 350 7.80e-44 155
Msa1103160 MtrunA17_Chr1g0177901 44.221 199 78 7 190 360 4 197 6.07e-43 148
Msa1103160 MtrunA17_Chr5g0429661 50.746 134 62 1 179 308 121 254 4.79e-42 150
Msa1103160 MtrunA17_Chr4g0046181 37.264 212 115 3 36 231 63 272 1.19e-32 123
Msa1103160 MtrunA17_Chr7g0238631 38.547 179 88 3 179 338 112 287 6.04e-32 126
Msa1103160 MtrunA17_Chr1g0157731 53.333 105 48 1 179 282 90 194 1.77e-31 125
Msa1103160 MtrunA17_Chr3g0139671 54.206 107 48 1 179 284 84 190 2.05e-31 125
Msa1103160 MtrunA17_Chr4g0008551 50.000 100 50 0 179 278 37 136 2.12e-31 121
Msa1103160 MtrunA17_Chr3g0133601 46.939 98 52 0 179 276 36 133 1.53e-29 113
Msa1103160 MtrunA17_Chr5g0397841 51.042 96 47 0 179 274 109 204 6.15e-29 117
Msa1103160 MtrunA17_Chr5g0437321 48.980 98 50 0 179 276 18 115 6.03e-28 110
Msa1103160 MtrunA17_Chr7g0233151 48.299 147 56 6 230 359 1 144 1.62e-27 106
Msa1103160 MtrunA17_Chr5g0417621 33.690 187 101 3 174 358 128 293 6.24e-27 110
Msa1103160 MtrunA17_Chr4g0053431 44.643 112 61 1 179 289 4 115 9.31e-27 107
Msa1103160 MtrunA17_Chr4g0042501 36.538 156 95 2 150 301 74 229 1.05e-25 107
Msa1103160 MtrunA17_Chr5g0401731 45.794 107 57 1 179 284 14 120 1.19e-25 105
Msa1103160 MtrunA17_Chr4g0022911 35.766 137 85 2 174 307 9 145 1.77e-25 104
Msa1103160 MtrunA17_Chr6g0454921 43.878 98 55 0 179 276 14 111 3.31e-25 101
Msa1103160 MtrunA17_Chr2g0309911 42.453 106 59 2 180 283 13 118 4.84e-25 103
Msa1103160 MtrunA17_Chr6g0460661 43.750 112 63 0 166 277 2 113 4.93e-25 99.8
Msa1103160 MtrunA17_Chr4g0022901 38.889 126 72 3 180 302 15 138 6.15e-25 102
Msa1103160 MtrunA17_Chr6g0480581 44.792 96 53 0 180 275 4 99 5.96e-24 99.0
Msa1103160 MtrunA17_Chr3g0110351 42.308 130 67 3 180 307 14 137 6.44e-24 100
Msa1103160 MtrunA17_Chr4g0055981 34.831 178 93 6 180 345 57 223 7.85e-24 98.2
Msa1103160 MtrunA17_Chr1g0180391 44.211 95 52 1 180 273 21 115 8.00e-24 98.2
Msa1103160 MtrunA17_Chr3g0131121 44.144 111 56 3 177 283 11 119 1.16e-23 99.4
Msa1103160 MtrunA17_Chr3g0080861 35.294 136 86 2 153 286 12 147 1.17e-23 102
Msa1103160 MtrunA17_Chr4g0057031 41.284 109 63 1 180 287 14 122 1.78e-23 98.2
Msa1103160 MtrunA17_Chr4g0022931 41.121 107 59 2 180 285 15 118 2.41e-23 97.8
Msa1103160 MtrunA17_Chr3g0099131 41.284 109 62 2 180 286 43 151 2.52e-23 101
Msa1103160 MtrunA17_Chr1g0194301 36.184 152 89 4 180 330 35 179 2.71e-23 97.8
Msa1103160 MtrunA17_Chr1g0211161 38.679 106 61 2 180 284 15 117 5.10e-23 95.9
Msa1103160 MtrunA17_Chr6g0460671 38.462 130 76 1 169 298 88 213 5.18e-23 98.6
Msa1103160 MtrunA17_Chr8g0385321 41.284 109 62 2 177 283 11 119 6.56e-23 97.4
Msa1103160 MtrunA17_Chr3g0117091 40.187 107 58 3 180 284 14 116 1.07e-22 97.4
Msa1103160 MtrunA17_Chr5g0434571 41.818 110 61 2 180 287 50 158 1.44e-22 97.4
Msa1103160 MtrunA17_Chr5g0410961 38.462 117 70 2 180 295 14 129 1.48e-22 97.1
Msa1103160 MtrunA17_Chr1g0194291 35.374 147 87 3 156 301 4 143 1.50e-22 95.5
Msa1103160 MtrunA17_Chr2g0281071 39.316 117 69 2 180 295 15 130 1.87e-22 96.7
Msa1103160 MtrunA17_Chr4g0037141 43.396 106 55 2 176 278 10 113 1.89e-22 95.9
Msa1103160 MtrunA17_Chr5g0440781 42.056 107 60 2 176 280 10 116 2.56e-22 93.2
Msa1103160 MtrunA17_Chr4g0048511 38.017 121 73 2 180 299 15 134 3.35e-22 96.3
Msa1103160 MtrunA17_Chr8g0342541 37.000 100 62 1 180 278 14 113 3.37e-22 96.3
Msa1103160 MtrunA17_Chr8g0354661 42.202 109 61 2 180 286 39 147 3.41e-22 97.8
Msa1103160 MtrunA17_Chr8g0343831 43.299 97 54 1 180 275 10 106 3.45e-22 94.4
Msa1103160 MtrunA17_Chr1g0168661 37.795 127 70 3 180 300 23 146 3.88e-22 94.4
Msa1103160 MtrunA17_Chr1g0154031 46.875 96 50 1 180 274 78 173 4.00e-22 96.7
Msa1103160 MtrunA17_Chr5g0441141 37.857 140 83 3 176 313 10 147 4.63e-22 94.4
Msa1103160 MtrunA17_Chr2g0323351 39.474 114 64 2 180 292 14 123 4.97e-22 94.0
Msa1103160 MtrunA17_Chr5g0440761 39.200 125 74 2 176 298 10 134 5.60e-22 94.0
Msa1103160 MtrunA17_Chr8g0346561 44.444 99 50 2 180 275 14 110 5.62e-22 94.7
Msa1103160 MtrunA17_Chr5g0395281 40.367 109 64 1 180 287 14 122 6.28e-22 94.7
Msa1103160 MtrunA17_Chr1g0186061 40.000 95 56 1 180 273 22 116 7.29e-22 93.6
Msa1103160 MtrunA17_Chr3g0125801 45.370 108 56 1 180 284 16 123 7.81e-22 94.4
Msa1103160 MtrunA17_Chr5g0397231 42.268 97 55 1 180 275 14 110 8.50e-22 94.7
Msa1103160 MtrunA17_Chr8g0349261 45.455 99 50 3 180 275 15 112 9.91e-22 94.0
Msa1103160 MtrunA17_Chr2g0323411 41.667 108 60 2 180 284 14 121 1.05e-21 94.4
Msa1103160 MtrunA17_Chr8g0342521 38.000 100 61 1 180 278 14 113 1.07e-21 94.7
Msa1103160 MtrunA17_Chr2g0327821 41.000 100 58 1 180 278 8 107 1.09e-21 92.4
Msa1103160 MtrunA17_Chr4g0030881 35.965 114 65 1 180 285 9 122 1.22e-21 92.8
Msa1103160 MtrunA17_Chr4g0039971 40.367 109 64 1 180 287 15 123 1.29e-21 94.7
Msa1103160 MtrunA17_Chr4g0070611 36.752 117 73 1 180 295 14 130 1.35e-21 94.0
Msa1103160 MtrunA17_Chr7g0275911 40.179 112 61 3 180 287 14 123 1.36e-21 92.8
Msa1103160 MtrunA17_Chr7g0254261 46.875 96 51 0 180 275 89 184 1.62e-21 94.4
Msa1103160 MtrunA17_Chr4g0070641 36.752 117 73 1 180 295 14 130 1.65e-21 90.1
Msa1103160 MtrunA17_Chr4g0058631 34.646 127 78 3 180 305 14 136 2.04e-21 94.0
Msa1103160 MtrunA17_Chr2g0330041 37.736 106 62 2 180 284 14 116 2.11e-21 94.7
Msa1103160 MtrunA17_Chr1g0209661 35.714 112 71 1 180 290 29 140 2.29e-21 93.2
Msa1103160 MtrunA17_Chr3g0088461 41.121 107 59 2 180 285 24 127 2.80e-21 93.6
Msa1103160 MtrunA17_Chr5g0441131 41.509 106 60 2 178 281 9 114 4.02e-21 89.7
Msa1103160 MtrunA17_Chr3g0104491 53.086 81 34 2 230 307 17 96 4.03e-21 92.0
Msa1103160 MtrunA17_Chr7g0228231 44.211 95 52 1 180 273 16 110 4.24e-21 90.1
Msa1103160 MtrunA17_Chr8g0334881 41.509 106 60 2 177 280 9 114 4.42e-21 92.4
Msa1103160 MtrunA17_Chr5g0416341 36.567 134 83 1 160 293 8 139 5.07e-21 94.0
Msa1103160 MtrunA17_Chr3g0115821 32.886 149 96 3 180 327 14 159 5.47e-21 92.8
Msa1103160 MtrunA17_Chr5g0435101 37.615 109 67 1 180 287 13 121 6.59e-21 89.7
Msa1103160 MtrunA17_Chr2g0328771 38.793 116 66 3 180 294 22 133 6.73e-21 92.0
Msa1103160 MtrunA17_Chr8g0387421 40.206 97 57 1 180 275 14 110 8.06e-21 91.7
Msa1103160 MtrunA17_Chr4g0032401 38.793 116 66 2 180 294 19 130 2.09e-20 90.9
Msa1103160 MtrunA17_Chr1g0203411 41.414 99 53 2 180 275 14 110 2.30e-20 90.1
Msa1103160 MtrunA17_Chr7g0261281 41.414 99 53 2 180 275 14 110 2.45e-20 89.7
Msa1103160 MtrunA17_Chr8g0342481 36.449 107 63 3 180 284 14 117 2.61e-20 91.3
Msa1103160 MtrunA17_Chr7g0274581 40.816 98 53 2 180 274 14 109 2.66e-20 87.8
Msa1103160 MtrunA17_Chr6g0450101 43.158 95 53 1 180 273 16 110 2.67e-20 88.2
Msa1103160 MtrunA17_Chr6g0452271 34.513 113 73 1 176 287 10 122 4.87e-20 89.7
Msa1103160 MtrunA17_Chr1g0193371 35.514 107 65 2 180 285 14 117 6.89e-20 89.7
Msa1103160 MtrunA17_Chr4g0022891 41.121 107 59 3 180 283 14 119 8.23e-20 87.4
Msa1103160 MtrunA17_Chr1g0193801 36.792 106 65 2 180 283 14 119 9.30e-20 89.7
Msa1103160 MtrunA17_Chr4g0013361 38.462 104 62 2 180 281 12 115 1.06e-19 88.2
Msa1103160 MtrunA17_Chr7g0270891 37.736 106 64 2 180 283 14 119 1.08e-19 89.4
Msa1103160 MtrunA17_Chr2g0322521 44.144 111 56 3 180 286 31 139 1.11e-19 89.7
Msa1103160 MtrunA17_Chr4g0042671 36.697 109 68 1 180 287 14 122 1.31e-19 89.4
Msa1103160 MtrunA17_Chr3g0103281 34.862 109 70 1 180 287 14 122 1.58e-19 88.2
Msa1103160 MtrunA17_Chr1g0151941 37.500 112 66 3 180 287 14 125 1.58e-19 87.0
Msa1103160 MtrunA17_Chr7g0228891 39.450 109 60 3 180 286 14 118 1.93e-19 87.0
Msa1103160 MtrunA17_Chr7g0271241 38.542 96 58 1 180 274 14 109 2.01e-19 88.6
Msa1103160 MtrunA17_Chr1g0167691 40.404 99 54 2 180 275 14 110 2.71e-19 86.3
Msa1103160 MtrunA17_Chr4g0044421 39.000 100 60 1 180 278 14 113 3.06e-19 84.7
Msa1103160 MtrunA17_Chr5g0417821 38.532 109 66 1 180 287 9 117 3.25e-19 86.7
Msa1103160 MtrunA17_Chr1g0167661 39.669 121 65 4 180 295 14 131 3.76e-19 85.9
Msa1103160 MtrunA17_Chr7g0217741 36.697 109 68 1 180 287 14 122 4.45e-19 86.7
Msa1103160 MtrunA17_Chr7g0247131 48.750 80 38 2 206 282 5 84 6.40e-19 85.5
Msa1103160 MtrunA17_Chr5g0421201 51.724 87 36 1 229 315 9 89 6.41e-19 83.6
Msa1103160 MtrunA17_Chr3g0092401 36.719 128 75 2 180 306 15 137 6.86e-19 86.3
Msa1103160 MtrunA17_Chr5g0400821 37.815 119 69 3 180 296 14 129 8.44e-19 85.9
Msa1103160 MtrunA17_Chr4g0022881 36.364 99 62 1 178 275 12 110 1.37e-18 84.0
Msa1103160 MtrunA17_Chr1g0192411 37.963 108 65 2 180 286 14 120 1.38e-18 86.3
Msa1103160 MtrunA17_Chr4g0068061 38.182 110 62 3 180 285 14 121 1.47e-18 85.5
Msa1103160 MtrunA17_Chr7g0217221 38.261 115 67 2 180 293 14 125 1.63e-18 84.3
Msa1103160 MtrunA17_Chr7g0240821 34.646 127 79 3 183 306 6 131 1.82e-18 83.6
Msa1103160 MtrunA17_Chr7g0220341 39.394 99 57 1 180 275 27 125 1.94e-18 84.3
Msa1103160 MtrunA17_Chr3g0121241 36.364 99 58 2 180 275 44 140 2.05e-18 84.7
Msa1103160 MtrunA17_Chr8g0362231 39.130 115 69 1 161 275 4 117 2.31e-18 85.9
Msa1103160 MtrunA17_Chr4g0068921 37.615 109 67 1 180 287 26 134 2.57e-18 82.0
Msa1103160 MtrunA17_Chr3g0135311 39.344 122 71 3 180 299 14 134 7.02e-18 84.0
Msa1103160 MtrunA17_Chr1g0194951 38.384 99 56 2 180 275 14 110 8.62e-18 84.0
Msa1103160 MtrunA17_Chr1g0203441 35.043 117 73 3 173 287 9 124 9.76e-18 82.4
Msa1103160 MtrunA17_Chr1g0187761 35.246 122 70 4 180 299 14 128 1.04e-17 82.0
Msa1103160 MtrunA17_Chr1g0152011 36.134 119 73 3 180 295 14 132 1.19e-17 83.2
Msa1103160 MtrunA17_Chr2g0311221 37.624 101 62 1 176 275 12 112 1.34e-17 82.8
Msa1103160 MtrunA17_Chr8g0360111 38.144 97 59 1 180 275 27 123 1.74e-17 81.3
Msa1103160 MtrunA17_Chr6g0470971 36.449 107 65 2 180 283 16 122 1.75e-17 81.6
Msa1103160 MtrunA17_Chr4g0060721 37.500 112 66 2 180 290 15 123 2.04e-17 82.4
Msa1103160 MtrunA17_Chr7g0254411 40.206 97 57 1 180 275 14 110 2.40e-17 82.0
Msa1103160 MtrunA17_Chr2g0293911 36.607 112 70 1 180 290 26 137 2.42e-17 82.0
Msa1103160 MtrunA17_Chr4g0072751 39.796 98 57 2 180 275 14 111 2.92e-17 82.0
Msa1103160 MtrunA17_Chr6g0453471 35.780 109 69 1 180 287 14 122 3.22e-17 82.0
Msa1103160 MtrunA17_Chr4g0054391 34.677 124 78 3 180 301 14 136 3.42e-17 80.9
Msa1103160 MtrunA17_Chr2g0327351 37.755 98 59 2 180 275 14 111 3.98e-17 81.3
Msa1103160 MtrunA17_Chr6g0453211 39.175 97 58 1 180 275 14 110 4.46e-17 81.3
Msa1103160 MtrunA17_Chr5g0434931 37.000 100 62 1 180 278 37 136 5.56e-17 80.1
Msa1103160 MtrunA17_Chr7g0228991 33.913 115 75 1 162 275 13 127 6.13e-17 80.1
Msa1103160 MtrunA17_Chr4g0028311 37.838 111 64 3 176 284 10 117 9.34e-17 80.1
Msa1103160 MtrunA17_Chr3g0099141 40.000 80 47 1 180 258 42 121 1.47e-16 75.9
Msa1103160 MtrunA17_Chr7g0269831 43.434 99 51 2 180 275 14 110 5.40e-16 78.2
Msa1103160 MtrunA17_Chr7g0238651 33.663 101 64 1 180 277 7 107 1.51e-15 77.0
Msa1103160 MtrunA17_Chr5g0434911 36.000 100 63 1 180 278 23 122 1.58e-15 75.9
Msa1103160 MtrunA17_Chr5g0434841 37.000 100 62 1 180 278 22 121 2.05e-15 76.3
Msa1103160 MtrunA17_Chr5g0434831 35.000 100 64 1 180 278 9 108 3.18e-15 73.6
Msa1103160 MtrunA17_Chr7g0264641 30.000 130 87 3 180 307 14 141 5.06e-15 74.3
Msa1103160 MtrunA17_Chr6g0487491 35.514 107 57 3 180 275 14 119 1.42e-14 73.2
Msa1103160 MtrunA17_Chr6g0483051 36.538 104 64 2 179 281 68 170 8.08e-14 72.8
Msa1103160 MtrunA17_Chr5g0434901 44.444 63 35 0 216 278 12 74 1.67e-13 66.6
Msa1103160 MtrunA17_Chr3g0104501 54.717 53 24 0 179 231 132 184 1.79e-13 68.6
Msa1103160 MtrunA17_Chr2g0323321 28.846 104 66 2 180 282 13 109 7.37e-13 64.7
Msa1103160 MtrunA17_Chr5g0425591 37.349 83 50 2 178 258 9 91 4.40e-12 62.0
Msa1103160 MtrunA17_Chr7g0229101 39.394 66 40 0 213 278 8 73 2.27e-11 62.8
Msa1103160 MtrunA17_Chr3g0093811 31.250 96 63 2 209 302 12 106 2.34e-11 63.5
Msa1103160 MtrunA17_Chr4g0046171 59.322 59 21 2 261 319 1 56 2.41e-11 61.2
Msa1103160 MtrunA17_Chr8g0342531 31.169 77 50 2 180 254 14 89 7.21e-11 60.5
Msa1103160 MtrunA17_Chr4g0042611 34.667 75 48 1 180 253 14 88 9.38e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1103160 AT4G18770.1 58.394 137 54 1 173 309 210 343 1.97e-50 174
Msa1103160 AT3G27785.1 52.727 165 75 2 150 311 157 321 9.45e-49 170
Msa1103160 AT5G40360.1 45.989 187 91 3 122 308 109 285 4.26e-47 164
Msa1103160 AT5G58850.1 52.174 138 56 2 179 306 104 241 2.04e-42 153
Msa1103160 AT5G11050.1 49.286 140 59 1 179 306 104 243 5.06e-41 149
Msa1103160 AT2G25230.1 44.667 150 78 2 160 308 6 151 2.52e-35 129
Msa1103160 AT5G40430.1 43.125 160 84 3 174 330 48 203 1.80e-34 127
Msa1103160 AT5G02320.1 53.704 108 47 1 179 286 126 230 3.29e-32 127
Msa1103160 AT5G02320.2 53.704 108 47 1 179 286 126 230 3.29e-32 127
Msa1103160 AT5G02320.3 53.704 108 47 1 179 286 66 170 3.48e-32 126
Msa1103160 AT5G11510.2 53.271 107 49 1 179 284 80 186 3.65e-32 128
Msa1103160 AT5G11510.3 53.271 107 49 1 179 284 80 186 3.74e-32 128
Msa1103160 AT5G11510.1 53.271 107 49 1 179 284 80 186 3.74e-32 128
Msa1103160 AT5G11510.4 53.271 107 49 1 179 284 80 186 3.74e-32 128
Msa1103160 AT5G11510.5 53.271 107 49 1 179 284 80 186 4.01e-32 128
Msa1103160 AT3G09370.2 54.630 108 46 1 179 286 134 238 5.83e-32 126
Msa1103160 AT3G09370.1 54.630 108 46 1 179 286 129 233 6.32e-32 125
Msa1103160 AT3G09370.3 54.630 108 46 1 179 286 142 246 9.11e-32 125
Msa1103160 AT4G32730.5 52.381 105 49 1 179 282 86 190 8.13e-30 121
Msa1103160 AT4G32730.4 52.381 105 49 1 179 282 86 190 8.13e-30 121
Msa1103160 AT4G32730.3 52.381 105 49 1 179 282 86 190 8.13e-30 121
Msa1103160 AT4G32730.2 52.381 105 49 1 179 282 86 190 8.13e-30 121
Msa1103160 AT4G32730.1 52.381 105 49 1 179 282 86 190 1.10e-29 120
Msa1103160 AT3G55730.1 47.115 104 55 0 175 278 51 154 4.29e-29 116
Msa1103160 AT3G09230.1 49.000 100 51 0 179 278 54 153 7.55e-28 113
Msa1103160 AT4G00540.2 53.000 100 44 1 180 276 103 202 8.62e-27 110
Msa1103160 AT4G00540.2 36.449 107 59 2 177 274 43 149 2.65e-13 70.9
Msa1103160 AT4G00540.1 53.000 100 44 1 180 276 101 200 2.02e-26 109
Msa1103160 AT4G00540.1 33.333 120 71 2 164 274 28 147 3.88e-13 70.5
Msa1103160 AT4G37260.1 45.536 112 58 1 179 290 12 120 3.08e-26 107
Msa1103160 AT1G26780.1 42.623 122 65 1 180 301 98 214 1.18e-25 104
Msa1103160 AT1G26780.2 42.623 122 65 1 180 301 98 214 2.06e-25 105
Msa1103160 AT3G12720.1 43.396 106 58 2 180 283 24 129 4.56e-25 103
Msa1103160 AT1G69560.1 40.833 120 66 1 180 299 107 221 6.06e-25 103
Msa1103160 AT1G69560.2 40.833 120 66 1 180 299 123 237 6.12e-25 104
Msa1103160 AT3G29020.1 42.342 111 61 1 180 290 65 172 8.47e-25 101
Msa1103160 AT5G67300.1 43.878 98 55 0 179 276 5 102 1.34e-24 102
Msa1103160 AT3G11440.2 41.284 109 62 2 180 286 43 151 1.46e-24 104
Msa1103160 AT2G39880.1 41.000 100 59 0 179 278 49 148 1.77e-24 103
Msa1103160 AT4G33450.1 42.982 114 61 1 180 293 19 128 2.43e-24 100
Msa1103160 AT3G29020.2 42.342 111 61 1 180 290 67 174 2.45e-24 101
Msa1103160 AT3G11440.3 41.284 109 62 2 180 286 43 151 3.61e-24 103
Msa1103160 AT3G11440.4 41.284 109 62 2 180 286 43 151 3.61e-24 103
Msa1103160 AT3G11440.1 41.284 109 62 2 180 286 43 151 3.61e-24 103
Msa1103160 AT3G50060.1 42.857 98 56 0 179 276 5 102 4.26e-24 100
Msa1103160 AT2G32460.2 43.243 111 57 3 180 286 8 116 8.76e-24 102
Msa1103160 AT2G32460.1 43.243 111 57 3 180 286 20 128 8.87e-24 102
Msa1103160 AT5G17800.1 37.063 143 83 3 171 313 86 221 9.80e-24 100
Msa1103160 AT5G14750.1 45.361 97 52 1 180 275 18 114 1.19e-23 97.4
Msa1103160 AT2G23290.1 45.918 98 53 0 179 276 12 109 1.20e-23 100
Msa1103160 AT1G17950.1 36.170 141 78 3 180 315 5 138 1.24e-23 98.6
Msa1103160 AT3G46130.1 40.517 116 64 2 180 294 11 122 1.31e-23 98.6
Msa1103160 AT5G59780.3 39.655 116 65 2 180 294 10 121 1.36e-23 98.2
Msa1103160 AT5G55020.1 43.119 109 60 2 180 286 28 136 1.50e-23 102
Msa1103160 AT4G28110.1 42.593 108 59 2 180 284 14 121 3.64e-23 98.2
Msa1103160 AT3G27920.1 46.392 97 51 1 180 275 16 112 3.91e-23 96.7
Msa1103160 AT4G05100.1 40.171 117 68 2 180 295 15 130 4.68e-23 98.6
Msa1103160 AT4G21440.1 40.496 121 70 2 180 299 14 133 7.61e-23 98.6
Msa1103160 AT4G12350.1 40.367 109 64 1 180 287 14 122 7.78e-23 97.1
Msa1103160 AT5G06100.1 39.450 109 64 2 180 286 34 142 8.44e-23 99.4
Msa1103160 AT4G22680.1 40.367 109 64 1 180 287 14 122 9.92e-23 96.7
Msa1103160 AT5G40330.1 44.330 97 53 1 180 275 14 110 1.12e-22 95.1
Msa1103160 AT4G38620.1 44.340 106 54 2 176 278 10 113 1.30e-22 96.7
Msa1103160 AT1G22640.1 42.727 110 61 2 176 283 10 119 1.30e-22 95.9
Msa1103160 AT4G26930.1 44.330 97 53 1 180 275 21 117 1.38e-22 98.2
Msa1103160 AT3G28470.1 38.144 97 59 1 180 275 14 110 1.40e-22 97.1
Msa1103160 AT2G47190.1 37.500 136 78 2 180 314 22 151 1.49e-22 96.3
Msa1103160 AT5G06100.5 39.450 109 64 2 180 286 34 142 1.56e-22 99.4
Msa1103160 AT5G06100.2 39.450 109 64 2 180 286 34 142 1.56e-22 99.4
Msa1103160 AT5G06100.3 39.450 109 64 2 180 286 34 142 1.56e-22 99.4
Msa1103160 AT5G06100.4 39.450 109 64 2 180 286 34 142 1.56e-22 99.4
Msa1103160 AT3G53200.1 43.564 101 54 2 180 278 11 110 1.59e-22 95.1
Msa1103160 AT1G66230.1 40.909 110 62 2 180 287 14 122 2.09e-22 95.9
Msa1103160 AT2G26950.1 37.097 124 69 2 165 283 3 122 2.61e-22 97.4
Msa1103160 AT3G61250.1 40.351 114 65 2 180 291 14 126 3.93e-22 95.5
Msa1103160 AT5G26660.1 33.077 130 82 3 180 308 14 139 9.68e-22 95.5
Msa1103160 AT4G09460.1 44.144 111 56 3 176 282 10 118 1.10e-21 92.8
Msa1103160 AT1G63910.1 42.268 97 55 1 180 275 14 110 1.59e-21 95.1
Msa1103160 AT5G12870.1 38.095 126 68 3 172 292 8 128 1.64e-21 93.6
Msa1103160 AT3G30210.1 37.500 120 73 2 180 297 29 148 2.04e-21 93.2
Msa1103160 AT3G24310.1 36.885 122 73 2 180 300 20 138 2.12e-21 92.8
Msa1103160 AT4G34990.1 42.202 109 61 2 177 283 11 119 2.29e-21 92.8
Msa1103160 AT2G16720.1 43.243 111 57 3 177 283 11 119 2.89e-21 92.4
Msa1103160 AT5G54230.1 38.525 122 73 2 180 300 14 134 3.07e-21 93.2
Msa1103160 AT4G13480.1 34.884 129 74 2 180 298 8 136 3.52e-21 92.0
Msa1103160 AT3G13890.2 37.736 106 62 2 180 284 14 116 3.79e-21 93.6
Msa1103160 AT5G10280.1 42.268 97 55 1 180 275 14 110 3.97e-21 93.2
Msa1103160 AT5G35550.1 41.593 113 63 2 180 289 16 128 4.63e-21 91.7
Msa1103160 AT3G13890.1 36.522 115 60 2 180 284 14 125 5.02e-21 93.6
Msa1103160 AT1G74430.1 41.509 106 60 2 180 283 14 119 5.71e-21 91.7
Msa1103160 AT5G16770.4 38.760 129 61 2 180 307 14 125 6.87e-21 92.4
Msa1103160 AT5G16770.3 38.760 129 61 2 180 307 14 125 6.87e-21 92.4
Msa1103160 AT2G26960.1 37.795 127 75 2 156 281 1 124 7.69e-21 93.6
Msa1103160 AT3G01530.1 45.263 95 51 1 180 273 27 121 8.47e-21 89.7
Msa1103160 AT5G16770.1 38.760 129 61 2 180 307 14 125 1.12e-20 92.0
Msa1103160 AT5G16770.2 38.760 129 61 2 180 307 14 125 1.12e-20 92.0
Msa1103160 AT1G68320.1 35.398 113 72 1 180 291 21 133 1.20e-20 91.3
Msa1103160 AT4G01680.3 36.697 109 65 2 180 287 14 119 1.34e-20 90.1
Msa1103160 AT1G34670.1 33.588 131 85 2 180 309 14 143 1.44e-20 92.0
Msa1103160 AT3G27810.1 44.211 95 52 1 180 273 22 116 1.67e-20 89.4
Msa1103160 AT3G13540.1 29.444 180 105 5 180 339 25 202 1.79e-20 89.7
Msa1103160 AT5G60890.1 44.340 106 57 2 180 283 14 119 1.94e-20 90.9
Msa1103160 AT3G08500.1 40.187 107 60 2 180 285 32 135 2.08e-20 91.3
Msa1103160 AT3G60460.1 41.748 103 58 2 180 280 13 115 2.31e-20 90.5
Msa1103160 AT1G48000.1 41.237 97 56 1 180 275 34 130 2.38e-20 89.4
Msa1103160 AT4G01680.1 37.037 108 64 2 180 286 14 118 2.59e-20 90.9
Msa1103160 AT1G25340.2 36.036 111 67 1 180 290 20 126 3.22e-20 89.7
Msa1103160 AT1G57560.2 37.755 98 60 1 180 276 14 111 4.13e-20 89.4
Msa1103160 AT5G65230.1 40.206 97 57 1 180 275 14 110 4.26e-20 90.1
Msa1103160 AT1G09540.1 38.318 107 62 2 180 285 14 117 4.36e-20 90.9
Msa1103160 AT1G57560.1 37.755 98 60 1 180 276 14 111 4.54e-20 90.1
Msa1103160 AT1G06180.1 41.837 98 54 2 180 275 14 110 4.66e-20 88.6
Msa1103160 AT1G25340.3 41.489 94 51 1 180 273 20 109 5.34e-20 89.7
Msa1103160 AT5G40350.1 43.158 95 53 1 180 273 19 113 5.76e-20 87.8
Msa1103160 AT2G31180.1 38.318 107 61 2 180 283 14 118 6.50e-20 88.2
Msa1103160 AT1G25340.1 42.105 95 54 1 180 273 20 114 8.30e-20 88.6
Msa1103160 AT3G02940.2 38.532 109 66 1 180 287 14 122 8.69e-20 89.0
Msa1103160 AT5G52600.1 40.594 101 59 1 176 275 10 110 9.64e-20 86.7
Msa1103160 AT1G14350.2 33.884 121 80 0 183 303 28 148 1.12e-19 90.1
Msa1103160 AT1G14350.1 33.884 121 80 0 183 303 28 148 1.12e-19 90.1
Msa1103160 AT1G73410.2 33.562 146 87 2 180 325 6 141 1.14e-19 86.7
Msa1103160 AT5G16600.1 39.091 110 64 2 180 287 14 122 1.18e-19 89.0
Msa1103160 AT5G56110.1 35.780 109 69 1 180 287 14 122 1.28e-19 89.0
Msa1103160 AT3G02940.1 38.532 109 66 1 180 287 14 122 1.29e-19 89.0
Msa1103160 AT3G02940.3 38.532 109 66 1 180 287 14 122 1.29e-19 89.0
Msa1103160 AT5G62320.1 42.727 110 54 4 180 280 15 124 1.34e-19 87.4
Msa1103160 AT2G02820.3 37.615 109 66 1 183 289 33 141 1.42e-19 89.0
Msa1103160 AT5G07690.1 42.157 102 58 1 180 280 14 115 1.50e-19 89.0
Msa1103160 AT4G01680.2 33.884 121 64 2 180 287 14 131 1.89e-19 88.6
Msa1103160 AT5G07700.1 43.299 97 54 1 180 275 14 110 1.96e-19 88.6
Msa1103160 AT5G07700.2 43.299 97 54 1 180 275 14 110 1.96e-19 88.6
Msa1103160 AT1G73410.1 33.562 146 87 2 180 325 6 141 2.02e-19 86.7
Msa1103160 AT2G02820.1 37.615 109 66 1 183 289 33 141 2.17e-19 89.7
Msa1103160 AT5G61420.2 43.299 97 54 1 180 275 14 110 2.19e-19 88.6
Msa1103160 AT2G02820.2 37.615 109 66 1 183 289 33 141 2.44e-19 89.7
Msa1103160 AT4G17785.2 35.659 129 65 2 180 307 15 126 3.12e-19 88.2
Msa1103160 AT1G35515.1 38.318 107 64 2 176 280 10 116 3.14e-19 85.5
Msa1103160 AT1G18570.1 40.741 108 61 2 180 284 15 122 3.15e-19 88.2
Msa1103160 AT4G17785.1 35.659 129 65 2 180 307 15 126 4.42e-19 87.8
Msa1103160 AT3G23250.1 41.414 99 53 2 180 275 14 110 4.81e-19 86.7
Msa1103160 AT5G62470.1 39.623 106 61 1 180 285 14 116 5.14e-19 87.4
Msa1103160 AT2G47460.1 32.867 143 77 3 180 321 14 138 5.47e-19 87.8
Msa1103160 AT1G74080.1 40.206 97 57 1 180 275 14 110 7.95e-19 86.7
Msa1103160 AT5G15310.4 37.615 109 67 1 180 287 14 122 8.33e-19 85.1
Msa1103160 AT5G15310.1 37.615 109 67 1 180 287 14 122 9.71e-19 86.3
Msa1103160 AT1G16490.1 38.261 115 65 3 176 286 12 124 9.84e-19 85.5
Msa1103160 AT5G15310.2 37.615 109 67 1 180 287 14 122 1.11e-18 85.9
Msa1103160 AT5G39700.1 38.947 95 58 0 181 275 57 151 1.44e-18 83.2
Msa1103160 AT5G52260.1 40.351 114 63 3 180 289 14 126 1.76e-18 84.7
Msa1103160 AT3G48920.1 39.474 114 65 2 180 292 20 130 1.88e-18 84.3
Msa1103160 AT1G18710.1 38.679 106 63 2 180 283 14 119 2.78e-18 84.0
Msa1103160 AT5G14340.1 37.037 108 62 3 180 285 26 129 3.14e-18 84.0
Msa1103160 AT4G37780.1 38.318 107 63 3 180 283 14 120 4.42e-18 84.3
Msa1103160 AT1G56160.1 38.776 98 57 2 180 275 16 112 4.51e-18 84.0
Msa1103160 AT3G47600.1 39.252 107 61 2 180 285 14 117 6.46e-18 84.0
Msa1103160 AT3G01140.1 36.697 109 68 1 180 287 57 165 8.73e-18 84.3
Msa1103160 AT3G01140.2 36.697 109 68 1 180 287 14 122 1.13e-17 83.6
Msa1103160 AT5G23000.1 39.048 105 62 2 176 278 10 114 1.21e-17 83.2
Msa1103160 AT5G49330.1 38.384 99 56 2 180 275 14 110 1.27e-17 83.2
Msa1103160 AT5G62470.2 39.252 107 61 2 180 285 14 117 1.38e-17 83.6
Msa1103160 AT1G56650.1 35.664 143 82 4 180 312 10 152 1.58e-17 81.6
Msa1103160 AT5G14750.3 43.750 80 44 1 213 291 18 97 1.71e-17 79.7
Msa1103160 AT5G57620.1 37.069 116 70 3 180 292 14 129 1.83e-17 82.8
Msa1103160 AT5G26660.2 35.417 96 58 2 213 308 17 108 2.20e-17 82.4
Msa1103160 AT5G49620.1 35.938 128 78 2 167 290 12 139 2.27e-17 82.0
Msa1103160 AT1G79180.1 36.893 103 60 2 176 275 12 112 2.34e-17 82.0
Msa1103160 AT1G74650.1 38.938 113 65 2 180 291 14 123 3.34e-17 82.0
Msa1103160 AT1G66370.1 36.607 112 64 2 180 284 10 121 3.85e-17 80.5
Msa1103160 AT1G08810.1 36.842 114 71 1 180 292 14 127 3.94e-17 80.9
Msa1103160 AT5G65790.1 37.838 111 66 3 180 287 14 124 4.19e-17 82.0
Msa1103160 AT3G62610.1 38.144 97 59 1 180 275 14 110 6.63e-17 81.3
Msa1103160 AT3G18100.1 39.583 96 58 0 178 273 544 639 7.83e-17 82.4
Msa1103160 AT3G18100.1 41.667 96 54 2 179 273 494 588 3.80e-15 77.4
Msa1103160 AT3G18100.3 39.583 96 58 0 178 273 496 591 8.14e-17 82.4
Msa1103160 AT3G18100.3 41.667 96 54 2 179 273 446 540 3.91e-15 77.4
Msa1103160 AT3G18100.4 39.583 96 58 0 178 273 383 478 1.00e-16 82.0
Msa1103160 AT3G18100.4 41.667 96 54 2 179 273 333 427 5.13e-15 77.0
Msa1103160 AT3G18100.2 39.583 96 58 0 178 273 331 426 1.05e-16 82.0
Msa1103160 AT3G18100.2 41.667 96 54 2 179 273 281 375 5.18e-15 76.6
Msa1103160 AT5G35550.2 45.570 79 41 1 213 289 53 131 1.53e-16 79.0
Msa1103160 AT3G06490.1 32.824 131 86 2 161 290 3 132 1.71e-16 79.7
Msa1103160 AT3G49690.1 37.838 111 66 3 180 287 14 124 1.73e-16 79.7
Msa1103160 AT3G28910.1 39.583 96 57 1 180 274 14 109 2.60e-16 79.3
Msa1103160 AT4G25560.1 37.383 107 64 2 180 283 12 118 2.88e-16 78.6
Msa1103160 AT1G66380.1 41.237 97 56 1 180 275 10 106 3.32e-16 75.1
Msa1103160 AT3G53200.2 36.885 122 63 4 213 322 12 131 8.08e-16 75.9
Msa1103160 AT3G12820.1 36.082 97 61 1 180 275 16 112 1.06e-15 76.3
Msa1103160 AT2G37630.1 33.043 115 71 2 180 291 4 115 1.53e-15 77.4
Msa1103160 AT3G27810.2 49.180 61 31 0 213 273 7 67 2.34e-15 73.9
Msa1103160 AT2G36890.1 37.037 108 65 3 180 284 14 121 3.38e-15 75.9
Msa1103160 AT2G36890.2 37.037 108 65 3 180 284 55 162 4.81e-15 75.9
Msa1103160 AT5G59780.2 39.024 82 46 1 213 294 23 100 1.02e-14 72.8
Msa1103160 AT3G46130.4 39.024 82 46 1 213 294 23 100 1.38e-14 72.8
Msa1103160 AT5G40350.2 47.541 61 32 0 213 273 8 68 1.40e-14 71.2
Msa1103160 AT3G46130.3 39.024 82 46 1 213 294 13 90 1.72e-14 72.4
Msa1103160 AT1G66390.1 40.206 97 57 1 180 275 10 106 3.81e-14 72.0
Msa1103160 AT5G49620.2 32.394 142 78 3 167 290 12 153 4.25e-14 72.8
Msa1103160 AT1G79180.2 29.851 134 60 3 176 275 12 145 5.28e-14 72.4
Msa1103160 AT3G47600.2 36.082 97 59 1 189 285 18 111 1.21e-13 71.6
Msa1103160 AT3G12820.2 44.444 63 35 0 213 275 2 64 1.33e-13 69.3
Msa1103160 AT5G14750.4 43.478 69 38 1 224 291 2 70 1.99e-13 67.4
Msa1103160 AT5G14750.2 43.478 69 38 1 224 291 2 70 1.99e-13 67.4
Msa1103160 AT1G22640.3 50.820 61 29 1 224 283 2 62 2.04e-13 68.9
Msa1103160 AT1G66380.3 47.458 59 31 0 216 274 14 72 1.45e-11 61.2
Msa1103160 AT1G14350.3 33.735 83 55 0 221 303 23 105 8.41e-11 63.2
Msa1103160 AT1G14350.4 33.735 83 55 0 221 303 23 105 8.41e-11 63.2

Find 89 sgRNAs with CRISPR-Local

Find 236 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTGCTTCAAAACTATATT+AGG 0.144743 7_3:-38288564 Msa1103160:CDS
TAAACACTGACAAAGGATTT+TGG 0.185679 7_3:-38290107 Msa1103160:CDS
ACCATCTTCAACCAAATATT+AGG 0.197577 7_3:-38289517 Msa1103160:CDS
GAAAATGTTCCCTATATCTA+TGG 0.251195 7_3:-38290381 Msa1103160:CDS
GTCCAGTTCGTGAGTTTGTT+AGG 0.259199 7_3:-38289614 Msa1103160:CDS
GAGAGAGAGACCCTAATATT+TGG 0.260215 7_3:+38289506 None:intergenic
GTCATATATTGCTGAATTCT+TGG 0.271338 7_3:-38289579 Msa1103160:CDS
GGAGCTTAAACATCATTTCT+TGG 0.304090 7_3:+38290031 None:intergenic
GAAACCAGAGATTTGTACTA+TGG 0.318482 7_3:-38290334 Msa1103160:CDS
AAAATCCTTTGTCAGTGTTT+AGG 0.328248 7_3:+38290109 None:intergenic
TAGATTGAAGGGAATTGTTT+TGG 0.328298 7_3:+38290076 None:intergenic
GAAAAGGAAATGATGGATAA+TGG 0.333050 7_3:-38288517 Msa1103160:CDS
CAATGGAATAAAGATGTTCT+TGG 0.353876 7_3:+38290010 None:intergenic
AACATCATTTCTTGGATTTG+AGG 0.356591 7_3:+38290039 None:intergenic
AGGGAAAACCCCATAGATAT+AGG 0.359127 7_3:+38290371 None:intergenic
ATTGCTTCAAAACTATATTA+GGG 0.367936 7_3:-38288563 Msa1103160:CDS
GGTTTCATGCATTGATTTAG+AGG 0.370888 7_3:+38290351 None:intergenic
CCATCTTCAACCAAATATTA+GGG 0.392145 7_3:-38289516 Msa1103160:intron
ATTGATGCTCATAAAGAAGT+TGG 0.392391 7_3:-38288724 Msa1103160:CDS
ATGACTTCAACTATGAAGAT+TGG 0.400351 7_3:-38288477 Msa1103160:CDS
AGCATTCCAATGATTCTTGA+TGG 0.402407 7_3:+38288651 None:intergenic
TGAGTCTTTGATTAGCATAC+AGG 0.402583 7_3:+38289968 None:intergenic
AGAATTCCATCAAGAATCAT+TGG 0.409549 7_3:-38288657 Msa1103160:CDS
CTGAAGGTTTACTAGATTGA+AGG 0.409840 7_3:+38290064 None:intergenic
AAAAGGAAATGATGGATAAT+GGG 0.418778 7_3:-38288516 Msa1103160:CDS
CCCTAATATTTGGTTGAAGA+TGG 0.419887 7_3:+38289516 None:intergenic
GGGAAAACCCCATAGATATA+GGG 0.421026 7_3:+38290372 None:intergenic
TCCAGTTCGTGAGTTTGTTA+GGG 0.424912 7_3:-38289613 Msa1103160:CDS
AAAACCTTCTGCGGACTCAT+TGG 0.426588 7_3:+38290197 None:intergenic
GCCCTAACAAACTCACGAAC+TGG 0.432105 7_3:+38289612 None:intergenic
CTCATACAATCAAAGGCAAA+TGG 0.440530 7_3:-38289879 Msa1103160:CDS
GAATTCTTGGATGGAAAGAC+TGG 0.443900 7_3:-38289566 Msa1103160:CDS
GCATCCTCCTCTTCATTCCA+TGG 0.456852 7_3:+38288754 None:intergenic
AGCCACCAACATCATCCTCT+TGG 0.457885 7_3:+38288449 None:intergenic
GAAATTTCAAAGAGATTGCC+TGG 0.458029 7_3:-38288688 Msa1103160:CDS
TTTGATTGTATGAGTAACTT+TGG 0.461263 7_3:+38289888 None:intergenic
GATGTTGGTGGCTATATTGA+TGG 0.461323 7_3:-38288439 Msa1103160:CDS
TGACTTCAACTATGAAGATT+GGG 0.476506 7_3:-38288476 Msa1103160:CDS
AAAATGTTCCCTATATCTAT+GGG 0.484467 7_3:-38290380 Msa1103160:CDS
ATATGGCATAATGGATTATG+AGG 0.488030 7_3:-38288398 Msa1103160:CDS
TCTTGGATTTGAGGTTCTGA+AGG 0.490355 7_3:+38290048 None:intergenic
CCAAGATGAAATTAGAAAAG+AGG 0.491474 7_3:-38288609 Msa1103160:CDS
TTGATGCTCATAAAGAAGTT+GGG 0.493054 7_3:-38288723 Msa1103160:CDS
TATATTGCTGAATTCTTGGA+TGG 0.498048 7_3:-38289575 Msa1103160:CDS
GAAACCATAGTACAAATCTC+TGG 0.501530 7_3:+38290330 None:intergenic
GGAAACAGTGTTGGGAGAGA+TGG 0.503752 7_3:-38289544 Msa1103160:CDS
GCCACCAACATCATCCTCTT+GGG 0.505591 7_3:+38288450 None:intergenic
ATAAAGAAGTTGGGAACAAG+TGG 0.509921 7_3:-38288714 Msa1103160:CDS
GCAATAGATCATTCCTCCAC+TGG 0.517180 7_3:-38290264 Msa1103160:CDS
TAGGTTTGAATGCAAGGCTT+GGG 0.519766 7_3:+38290226 None:intergenic
ATTAAATACAGAAGGGGCCA+TGG 0.521002 7_3:-38288771 Msa1103160:intron
GAAAGACTGGGAAACAGTGT+TGG 0.523695 7_3:-38289553 Msa1103160:CDS
TGAAGGTTTACTAGATTGAA+GGG 0.528897 7_3:+38290065 None:intergenic
ATCATTGGAATGCTACTAAG+AGG 0.529236 7_3:-38288642 Msa1103160:CDS
TGATGGTTAGCATCATTAAG+AGG 0.531273 7_3:+38290300 None:intergenic
TGTGTGTAGGTTTGAATGCA+AGG 0.531666 7_3:+38290220 None:intergenic
AGATTGTGAAAAGGAAATGA+TGG 0.531718 7_3:-38288524 Msa1103160:CDS
ATTATTGACAAAACCTTCTG+CGG 0.542997 7_3:+38290188 None:intergenic
AAGGCTTGGGATCATAAGAA+AGG 0.544446 7_3:+38290239 None:intergenic
AATGGACTGCAGATGAGGAC+AGG 0.545420 7_3:-38289861 Msa1103160:intron
AATTGCTCAAGATTGTGAAA+AGG 0.546787 7_3:-38288533 Msa1103160:CDS
AAAGTTACTCATACAATCAA+AGG 0.548539 7_3:-38289886 Msa1103160:CDS
TTGCAGCCAAAACAAAATGA+TGG 0.549491 7_3:+38290283 None:intergenic
AAAGACTGGGAAACAGTGTT+GGG 0.552335 7_3:-38289552 Msa1103160:CDS
GTTTGTTAGGGCTTAAACAA+TGG 0.552444 7_3:-38289601 Msa1103160:CDS
AGGCTTGGGATCATAAGAAA+GGG 0.560236 7_3:+38290240 None:intergenic
GCGGACTCATTGGTGTGTGT+AGG 0.564328 7_3:+38290207 None:intergenic
GTTTCATGCATTGATTTAGA+GGG 0.566443 7_3:+38290352 None:intergenic
ATGGAATTCTCAGTACGTCC+AGG 0.572465 7_3:+38288670 None:intergenic
AGGCAAATGGACTGCAGATG+AGG 0.572483 7_3:-38289866 Msa1103160:CDS
AACAAAATGGAAGTTGTGCA+TGG 0.576046 7_3:-38290135 Msa1103160:CDS
GTAGGTTTGAATGCAAGGCT+TGG 0.588269 7_3:+38290225 None:intergenic
GTCTTTGATTAGCATACAGG+GGG 0.596320 7_3:+38289971 None:intergenic
AATGATGGATAATGGGAATG+AGG 0.596781 7_3:-38288509 Msa1103160:CDS
CATAAGAAAGGGACCAGTGG+AGG 0.605059 7_3:+38290251 None:intergenic
GAGTCTTTGATTAGCATACA+GGG 0.606094 7_3:+38289969 None:intergenic
ACCCAAGAGGATGATGTTGG+TGG 0.608154 7_3:-38288451 Msa1103160:CDS
GGCTACCTAAACACTGACAA+AGG 0.631206 7_3:-38290114 Msa1103160:CDS
CACACCAATGAGTCCGCAGA+AGG 0.636636 7_3:-38290201 Msa1103160:CDS
GAAGGGGCCATGGAATGAAG+AGG 0.636638 7_3:-38288761 Msa1103160:CDS
GGGGCCATGGAATGAAGAGG+AGG 0.644373 7_3:-38288758 Msa1103160:CDS
AATTCTTGGATGGAAAGACT+GGG 0.644480 7_3:-38289565 Msa1103160:CDS
TAAAGAAGTTGGGAACAAGT+GGG 0.650172 7_3:-38288713 Msa1103160:CDS
TGAAGATTGGGCAACCCAAG+AGG 0.663013 7_3:-38288464 Msa1103160:CDS
TGGTTAGCATCATTAAGAGG+TGG 0.664839 7_3:+38290303 None:intergenic
AGTCTTTGATTAGCATACAG+GGG 0.666970 7_3:+38289970 None:intergenic
GCAACCCAAGAGGATGATGT+TGG 0.678097 7_3:-38288454 Msa1103160:CDS
GATCATAAGAAAGGGACCAG+TGG 0.690979 7_3:+38290248 None:intergenic
AAATGTTCCCTATATCTATG+GGG 0.694024 7_3:-38290379 Msa1103160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGAAAATTGATATAATT+TGG + chr7_3:38289482-38289501 None:intergenic 10.0%
!!! TTTTGAAAATTGATATAATT+TGG + chr7_3:38289482-38289501 None:intergenic 10.0%
!! TGTAAAAAACAATAACAAAA+TGG - chr7_3:38288644-38288663 Msa1103160:CDS 15.0%
!!! ATCTCTTTTTAAATACTTAA+TGG - chr7_3:38289011-38289030 Msa1103160:intron 15.0%
!! TTAAATACTTAATGGTTATA+AGG - chr7_3:38289019-38289038 Msa1103160:intron 15.0%
!! TTATGTAAATATCAATTTAG+TGG + chr7_3:38289616-38289635 None:intergenic 15.0%
!!! GTTTCATAAGATATATATTT+TGG + chr7_3:38289734-38289753 None:intergenic 15.0%
!! TGTAAAAAACAATAACAAAA+TGG - chr7_3:38288644-38288663 Msa1103160:CDS 15.0%
!!! ATCTCTTTTTAAATACTTAA+TGG - chr7_3:38289011-38289030 Msa1103160:intron 15.0%
!! TTAAATACTTAATGGTTATA+AGG - chr7_3:38289019-38289038 Msa1103160:intron 15.0%
!! TTATGTAAATATCAATTTAG+TGG + chr7_3:38289616-38289635 None:intergenic 15.0%
!!! GTTTCATAAGATATATATTT+TGG + chr7_3:38289734-38289753 None:intergenic 15.0%
!!! TATTCATTTTATCCTAATGT+TGG - chr7_3:38289070-38289089 Msa1103160:intron 20.0%
!! AACAATTATAAACCAACATT+AGG + chr7_3:38289085-38289104 None:intergenic 20.0%
!! ATAACAACATAAAAATGAGA+AGG + chr7_3:38289427-38289446 None:intergenic 20.0%
!! ATGTACAAAAAATTGAATAG+AGG + chr7_3:38289988-38290007 None:intergenic 20.0%
!! AATTGCTTCAAAACTATATT+AGG - chr7_3:38290228-38290247 Msa1103160:CDS 20.0%
!! ATTGCTTCAAAACTATATTA+GGG - chr7_3:38290229-38290248 Msa1103160:CDS 20.0%
!! AATGAAATGAAAAATGGATA+TGG - chr7_3:38290377-38290396 Msa1103160:CDS 20.0%
!!! TATTCATTTTATCCTAATGT+TGG - chr7_3:38289070-38289089 Msa1103160:intron 20.0%
!! AACAATTATAAACCAACATT+AGG + chr7_3:38289085-38289104 None:intergenic 20.0%
!! ATAACAACATAAAAATGAGA+AGG + chr7_3:38289427-38289446 None:intergenic 20.0%
!! ATGTACAAAAAATTGAATAG+AGG + chr7_3:38289988-38290007 None:intergenic 20.0%
!! AATTGCTTCAAAACTATATT+AGG - chr7_3:38290228-38290247 Msa1103160:CDS 20.0%
!! ATTGCTTCAAAACTATATTA+GGG - chr7_3:38290229-38290248 Msa1103160:CDS 20.0%
!! AATGAAATGAAAAATGGATA+TGG - chr7_3:38290377-38290396 Msa1103160:CDS 20.0%
!! GGAACATTTTCTATGTAATT+TGG + chr7_3:38288402-38288421 None:intergenic 25.0%
! AAAATGTTCCCTATATCTAT+GGG - chr7_3:38288412-38288431 Msa1103160:CDS 25.0%
!!! ATTGTTTTTTACAAAGTCCA+TGG + chr7_3:38288637-38288656 None:intergenic 25.0%
! TTTGATTGTATGAGTAACTT+TGG + chr7_3:38288907-38288926 None:intergenic 25.0%
! AAAGTTACTCATACAATCAA+AGG - chr7_3:38288906-38288925 Msa1103160:intron 25.0%
!!! TATATATTTTGGCACAAGTA+GGG + chr7_3:38289723-38289742 None:intergenic 25.0%
!!! ATATATATTTTGGCACAAGT+AGG + chr7_3:38289724-38289743 None:intergenic 25.0%
!!! TTTTGAAGCAATTTTCTTCT+TGG + chr7_3:38290221-38290240 None:intergenic 25.0%
!!! AAAAGGAAATGATGGATAAT+GGG - chr7_3:38290276-38290295 Msa1103160:CDS 25.0%
! GATGGAAATGAAATGAAAAA+TGG - chr7_3:38290371-38290390 Msa1103160:CDS 25.0%
!! GGAACATTTTCTATGTAATT+TGG + chr7_3:38288402-38288421 None:intergenic 25.0%
! AAAATGTTCCCTATATCTAT+GGG - chr7_3:38288412-38288431 Msa1103160:CDS 25.0%
!!! ATTGTTTTTTACAAAGTCCA+TGG + chr7_3:38288637-38288656 None:intergenic 25.0%
! TTTGATTGTATGAGTAACTT+TGG + chr7_3:38288907-38288926 None:intergenic 25.0%
! AAAGTTACTCATACAATCAA+AGG - chr7_3:38288906-38288925 Msa1103160:intron 25.0%
!!! TATATATTTTGGCACAAGTA+GGG + chr7_3:38289723-38289742 None:intergenic 25.0%
!!! ATATATATTTTGGCACAAGT+AGG + chr7_3:38289724-38289743 None:intergenic 25.0%
!!! TTTTGAAGCAATTTTCTTCT+TGG + chr7_3:38290221-38290240 None:intergenic 25.0%
!!! AAAAGGAAATGATGGATAAT+GGG - chr7_3:38290276-38290295 Msa1103160:CDS 25.0%
! GATGGAAATGAAATGAAAAA+TGG - chr7_3:38290371-38290390 Msa1103160:CDS 25.0%
GAAAATGTTCCCTATATCTA+TGG - chr7_3:38288411-38288430 Msa1103160:CDS 30.0%
AAATGTTCCCTATATCTATG+GGG - chr7_3:38288413-38288432 Msa1103160:CDS 30.0%
!! GTTTCATGCATTGATTTAGA+GGG + chr7_3:38288443-38288462 None:intergenic 30.0%
!! TGCTAACCATCATTTTGTTT+TGG - chr7_3:38288503-38288522 Msa1103160:CDS 30.0%
ATTATTGACAAAACCTTCTG+CGG + chr7_3:38288607-38288626 None:intergenic 30.0%
!!! TGTCAATAATTTTGACTCCA+TGG - chr7_3:38288617-38288636 Msa1103160:CDS 30.0%
AAAATCCTTTGTCAGTGTTT+AGG + chr7_3:38288686-38288705 None:intergenic 30.0%
! TAAACACTGACAAAGGATTT+TGG - chr7_3:38288685-38288704 Msa1103160:CDS 30.0%
! TAGATTGAAGGGAATTGTTT+TGG + chr7_3:38288719-38288738 None:intergenic 30.0%
TGAAGGTTTACTAGATTGAA+GGG + chr7_3:38288730-38288749 None:intergenic 30.0%
AACATCATTTCTTGGATTTG+AGG + chr7_3:38288756-38288775 None:intergenic 30.0%
CAATGGAATAAAGATGTTCT+TGG + chr7_3:38288785-38288804 None:intergenic 30.0%
!! GTTGTTTTCAGTTCTATCAA+TGG + chr7_3:38288802-38288821 None:intergenic 30.0%
! TTACTTGATCACTCTTTTGT+TGG + chr7_3:38288866-38288885 None:intergenic 30.0%
GTCATATATTGCTGAATTCT+TGG - chr7_3:38289213-38289232 Msa1103160:intron 30.0%
TATATTGCTGAATTCTTGGA+TGG - chr7_3:38289217-38289236 Msa1103160:intron 30.0%
ACCATCTTCAACCAAATATT+AGG - chr7_3:38289275-38289294 Msa1103160:intron 30.0%
CCATCTTCAACCAAATATTA+GGG - chr7_3:38289276-38289295 Msa1103160:intron 30.0%
ATCCACACATTAAATACAGA+AGG - chr7_3:38290013-38290032 Msa1103160:CDS 30.0%
TCCACACATTAAATACAGAA+GGG - chr7_3:38290014-38290033 Msa1103160:CDS 30.0%
ATTGATGCTCATAAAGAAGT+TGG - chr7_3:38290068-38290087 Msa1103160:CDS 30.0%
TTGATGCTCATAAAGAAGTT+GGG - chr7_3:38290069-38290088 Msa1103160:CDS 30.0%
AGAATTCCATCAAGAATCAT+TGG - chr7_3:38290135-38290154 Msa1103160:CDS 30.0%
! CCTCTTTTCTAATTTCATCT+TGG + chr7_3:38290186-38290205 None:intergenic 30.0%
CCAAGATGAAATTAGAAAAG+AGG - chr7_3:38290183-38290202 Msa1103160:CDS 30.0%
AATTGCTCAAGATTGTGAAA+AGG - chr7_3:38290259-38290278 Msa1103160:CDS 30.0%
AGATTGTGAAAAGGAAATGA+TGG - chr7_3:38290268-38290287 Msa1103160:CDS 30.0%
!! GAAAAGGAAATGATGGATAA+TGG - chr7_3:38290275-38290294 Msa1103160:CDS 30.0%
ATGACTTCAACTATGAAGAT+TGG - chr7_3:38290315-38290334 Msa1103160:CDS 30.0%
TGACTTCAACTATGAAGATT+GGG - chr7_3:38290316-38290335 Msa1103160:CDS 30.0%
GAAAAATGGATATGGCATAA+TGG - chr7_3:38290385-38290404 Msa1103160:CDS 30.0%
!! ATATGGCATAATGGATTATG+AGG - chr7_3:38290394-38290413 Msa1103160:CDS 30.0%
GAAAATGTTCCCTATATCTA+TGG - chr7_3:38288411-38288430 Msa1103160:CDS 30.0%
AAATGTTCCCTATATCTATG+GGG - chr7_3:38288413-38288432 Msa1103160:CDS 30.0%
!! GTTTCATGCATTGATTTAGA+GGG + chr7_3:38288443-38288462 None:intergenic 30.0%
!! TGCTAACCATCATTTTGTTT+TGG - chr7_3:38288503-38288522 Msa1103160:CDS 30.0%
ATTATTGACAAAACCTTCTG+CGG + chr7_3:38288607-38288626 None:intergenic 30.0%
!!! TGTCAATAATTTTGACTCCA+TGG - chr7_3:38288617-38288636 Msa1103160:CDS 30.0%
AAAATCCTTTGTCAGTGTTT+AGG + chr7_3:38288686-38288705 None:intergenic 30.0%
! TAAACACTGACAAAGGATTT+TGG - chr7_3:38288685-38288704 Msa1103160:CDS 30.0%
! TAGATTGAAGGGAATTGTTT+TGG + chr7_3:38288719-38288738 None:intergenic 30.0%
TGAAGGTTTACTAGATTGAA+GGG + chr7_3:38288730-38288749 None:intergenic 30.0%
AACATCATTTCTTGGATTTG+AGG + chr7_3:38288756-38288775 None:intergenic 30.0%
CAATGGAATAAAGATGTTCT+TGG + chr7_3:38288785-38288804 None:intergenic 30.0%
!! GTTGTTTTCAGTTCTATCAA+TGG + chr7_3:38288802-38288821 None:intergenic 30.0%
! TTACTTGATCACTCTTTTGT+TGG + chr7_3:38288866-38288885 None:intergenic 30.0%
GTCATATATTGCTGAATTCT+TGG - chr7_3:38289213-38289232 Msa1103160:intron 30.0%
TATATTGCTGAATTCTTGGA+TGG - chr7_3:38289217-38289236 Msa1103160:intron 30.0%
ACCATCTTCAACCAAATATT+AGG - chr7_3:38289275-38289294 Msa1103160:intron 30.0%
CCATCTTCAACCAAATATTA+GGG - chr7_3:38289276-38289295 Msa1103160:intron 30.0%
ATCCACACATTAAATACAGA+AGG - chr7_3:38290013-38290032 Msa1103160:CDS 30.0%
TCCACACATTAAATACAGAA+GGG - chr7_3:38290014-38290033 Msa1103160:CDS 30.0%
ATTGATGCTCATAAAGAAGT+TGG - chr7_3:38290068-38290087 Msa1103160:CDS 30.0%
TTGATGCTCATAAAGAAGTT+GGG - chr7_3:38290069-38290088 Msa1103160:CDS 30.0%
AGAATTCCATCAAGAATCAT+TGG - chr7_3:38290135-38290154 Msa1103160:CDS 30.0%
! CCTCTTTTCTAATTTCATCT+TGG + chr7_3:38290186-38290205 None:intergenic 30.0%
CCAAGATGAAATTAGAAAAG+AGG - chr7_3:38290183-38290202 Msa1103160:CDS 30.0%
AATTGCTCAAGATTGTGAAA+AGG - chr7_3:38290259-38290278 Msa1103160:CDS 30.0%
AGATTGTGAAAAGGAAATGA+TGG - chr7_3:38290268-38290287 Msa1103160:CDS 30.0%
!! GAAAAGGAAATGATGGATAA+TGG - chr7_3:38290275-38290294 Msa1103160:CDS 30.0%
ATGACTTCAACTATGAAGAT+TGG - chr7_3:38290315-38290334 Msa1103160:CDS 30.0%
TGACTTCAACTATGAAGATT+GGG - chr7_3:38290316-38290335 Msa1103160:CDS 30.0%
GAAAAATGGATATGGCATAA+TGG - chr7_3:38290385-38290404 Msa1103160:CDS 30.0%
!! ATATGGCATAATGGATTATG+AGG - chr7_3:38290394-38290413 Msa1103160:CDS 30.0%
!! GGTTTCATGCATTGATTTAG+AGG + chr7_3:38288444-38288463 None:intergenic 35.0%
GAAACCAGAGATTTGTACTA+TGG - chr7_3:38288458-38288477 Msa1103160:CDS 35.0%
GAAACCATAGTACAAATCTC+TGG + chr7_3:38288465-38288484 None:intergenic 35.0%
TGATGGTTAGCATCATTAAG+AGG + chr7_3:38288495-38288514 None:intergenic 35.0%
TTGCAGCCAAAACAAAATGA+TGG + chr7_3:38288512-38288531 None:intergenic 35.0%
AACAAAATGGAAGTTGTGCA+TGG - chr7_3:38288657-38288676 Msa1103160:CDS 35.0%
CTGAAGGTTTACTAGATTGA+AGG + chr7_3:38288731-38288750 None:intergenic 35.0%
GGAGCTTAAACATCATTTCT+TGG + chr7_3:38288764-38288783 None:intergenic 35.0%
AGTCTTTGATTAGCATACAG+GGG + chr7_3:38288825-38288844 None:intergenic 35.0%
GAGTCTTTGATTAGCATACA+GGG + chr7_3:38288826-38288845 None:intergenic 35.0%
TGAGTCTTTGATTAGCATAC+AGG + chr7_3:38288827-38288846 None:intergenic 35.0%
CTCATACAATCAAAGGCAAA+TGG - chr7_3:38288913-38288932 Msa1103160:intron 35.0%
! GTTTGTTAGGGCTTAAACAA+TGG - chr7_3:38289191-38289210 Msa1103160:intron 35.0%
AATTCTTGGATGGAAAGACT+GGG - chr7_3:38289227-38289246 Msa1103160:intron 35.0%
CCCTAATATTTGGTTGAAGA+TGG + chr7_3:38289279-38289298 None:intergenic 35.0%
!!! GCAACATATTTTGAGGTGTA+AGG + chr7_3:38289695-38289714 None:intergenic 35.0%
! GGTCAATGCAACATATTTTG+AGG + chr7_3:38289702-38289721 None:intergenic 35.0%
CCACACATTAAATACAGAAG+GGG - chr7_3:38290015-38290034 Msa1103160:CDS 35.0%
ATAAAGAAGTTGGGAACAAG+TGG - chr7_3:38290078-38290097 Msa1103160:CDS 35.0%
TAAAGAAGTTGGGAACAAGT+GGG - chr7_3:38290079-38290098 Msa1103160:CDS 35.0%
GAAATTTCAAAGAGATTGCC+TGG - chr7_3:38290104-38290123 Msa1103160:CDS 35.0%
AGCATTCCAATGATTCTTGA+TGG + chr7_3:38290144-38290163 None:intergenic 35.0%
ATCATTGGAATGCTACTAAG+AGG - chr7_3:38290150-38290169 Msa1103160:CDS 35.0%
!! AATGATGGATAATGGGAATG+AGG - chr7_3:38290283-38290302 Msa1103160:CDS 35.0%
!! GGTTTCATGCATTGATTTAG+AGG + chr7_3:38288444-38288463 None:intergenic 35.0%
GAAACCAGAGATTTGTACTA+TGG - chr7_3:38288458-38288477 Msa1103160:CDS 35.0%
GAAACCATAGTACAAATCTC+TGG + chr7_3:38288465-38288484 None:intergenic 35.0%
TGATGGTTAGCATCATTAAG+AGG + chr7_3:38288495-38288514 None:intergenic 35.0%
TTGCAGCCAAAACAAAATGA+TGG + chr7_3:38288512-38288531 None:intergenic 35.0%
AACAAAATGGAAGTTGTGCA+TGG - chr7_3:38288657-38288676 Msa1103160:CDS 35.0%
CTGAAGGTTTACTAGATTGA+AGG + chr7_3:38288731-38288750 None:intergenic 35.0%
GGAGCTTAAACATCATTTCT+TGG + chr7_3:38288764-38288783 None:intergenic 35.0%
AGTCTTTGATTAGCATACAG+GGG + chr7_3:38288825-38288844 None:intergenic 35.0%
GAGTCTTTGATTAGCATACA+GGG + chr7_3:38288826-38288845 None:intergenic 35.0%
TGAGTCTTTGATTAGCATAC+AGG + chr7_3:38288827-38288846 None:intergenic 35.0%
CTCATACAATCAAAGGCAAA+TGG - chr7_3:38288913-38288932 Msa1103160:intron 35.0%
! GTTTGTTAGGGCTTAAACAA+TGG - chr7_3:38289191-38289210 Msa1103160:intron 35.0%
AATTCTTGGATGGAAAGACT+GGG - chr7_3:38289227-38289246 Msa1103160:intron 35.0%
CCCTAATATTTGGTTGAAGA+TGG + chr7_3:38289279-38289298 None:intergenic 35.0%
!!! GCAACATATTTTGAGGTGTA+AGG + chr7_3:38289695-38289714 None:intergenic 35.0%
! GGTCAATGCAACATATTTTG+AGG + chr7_3:38289702-38289721 None:intergenic 35.0%
CCACACATTAAATACAGAAG+GGG - chr7_3:38290015-38290034 Msa1103160:CDS 35.0%
ATAAAGAAGTTGGGAACAAG+TGG - chr7_3:38290078-38290097 Msa1103160:CDS 35.0%
TAAAGAAGTTGGGAACAAGT+GGG - chr7_3:38290079-38290098 Msa1103160:CDS 35.0%
GAAATTTCAAAGAGATTGCC+TGG - chr7_3:38290104-38290123 Msa1103160:CDS 35.0%
AGCATTCCAATGATTCTTGA+TGG + chr7_3:38290144-38290163 None:intergenic 35.0%
ATCATTGGAATGCTACTAAG+AGG - chr7_3:38290150-38290169 Msa1103160:CDS 35.0%
!! AATGATGGATAATGGGAATG+AGG - chr7_3:38290283-38290302 Msa1103160:CDS 35.0%
GGGAAAACCCCATAGATATA+GGG + chr7_3:38288423-38288442 None:intergenic 40.0%
AGGGAAAACCCCATAGATAT+AGG + chr7_3:38288424-38288443 None:intergenic 40.0%
TGGTTAGCATCATTAAGAGG+TGG + chr7_3:38288492-38288511 None:intergenic 40.0%
AGGCTTGGGATCATAAGAAA+GGG + chr7_3:38288555-38288574 None:intergenic 40.0%
AAGGCTTGGGATCATAAGAA+AGG + chr7_3:38288556-38288575 None:intergenic 40.0%
TAGGTTTGAATGCAAGGCTT+GGG + chr7_3:38288569-38288588 None:intergenic 40.0%
TGTGTGTAGGTTTGAATGCA+AGG + chr7_3:38288575-38288594 None:intergenic 40.0%
! TCTTGGATTTGAGGTTCTGA+AGG + chr7_3:38288747-38288766 None:intergenic 40.0%
GTCTTTGATTAGCATACAGG+GGG + chr7_3:38288824-38288843 None:intergenic 40.0%
!! TCCAGTTCGTGAGTTTGTTA+GGG - chr7_3:38289179-38289198 Msa1103160:intron 40.0%
GAATTCTTGGATGGAAAGAC+TGG - chr7_3:38289226-38289245 Msa1103160:intron 40.0%
AAAGACTGGGAAACAGTGTT+GGG - chr7_3:38289240-38289259 Msa1103160:intron 40.0%
GAGAGAGAGACCCTAATATT+TGG + chr7_3:38289289-38289308 None:intergenic 40.0%
CCCCTTCTGTATTTAATGTG+TGG + chr7_3:38290018-38290037 None:intergenic 40.0%
ATTAAATACAGAAGGGGCCA+TGG - chr7_3:38290021-38290040 Msa1103160:CDS 40.0%
!! GATGTTGGTGGCTATATTGA+TGG - chr7_3:38290353-38290372 Msa1103160:CDS 40.0%
GGGAAAACCCCATAGATATA+GGG + chr7_3:38288423-38288442 None:intergenic 40.0%
AGGGAAAACCCCATAGATAT+AGG + chr7_3:38288424-38288443 None:intergenic 40.0%
TGGTTAGCATCATTAAGAGG+TGG + chr7_3:38288492-38288511 None:intergenic 40.0%
AGGCTTGGGATCATAAGAAA+GGG + chr7_3:38288555-38288574 None:intergenic 40.0%
AAGGCTTGGGATCATAAGAA+AGG + chr7_3:38288556-38288575 None:intergenic 40.0%
TAGGTTTGAATGCAAGGCTT+GGG + chr7_3:38288569-38288588 None:intergenic 40.0%
TGTGTGTAGGTTTGAATGCA+AGG + chr7_3:38288575-38288594 None:intergenic 40.0%
! TCTTGGATTTGAGGTTCTGA+AGG + chr7_3:38288747-38288766 None:intergenic 40.0%
GTCTTTGATTAGCATACAGG+GGG + chr7_3:38288824-38288843 None:intergenic 40.0%
!! TCCAGTTCGTGAGTTTGTTA+GGG - chr7_3:38289179-38289198 Msa1103160:intron 40.0%
GAATTCTTGGATGGAAAGAC+TGG - chr7_3:38289226-38289245 Msa1103160:intron 40.0%
AAAGACTGGGAAACAGTGTT+GGG - chr7_3:38289240-38289259 Msa1103160:intron 40.0%
GAGAGAGAGACCCTAATATT+TGG + chr7_3:38289289-38289308 None:intergenic 40.0%
CCCCTTCTGTATTTAATGTG+TGG + chr7_3:38290018-38290037 None:intergenic 40.0%
ATTAAATACAGAAGGGGCCA+TGG - chr7_3:38290021-38290040 Msa1103160:CDS 40.0%
!! GATGTTGGTGGCTATATTGA+TGG - chr7_3:38290353-38290372 Msa1103160:CDS 40.0%
GCAATAGATCATTCCTCCAC+TGG - chr7_3:38288528-38288547 Msa1103160:CDS 45.0%
GATCATAAGAAAGGGACCAG+TGG + chr7_3:38288547-38288566 None:intergenic 45.0%
GTAGGTTTGAATGCAAGGCT+TGG + chr7_3:38288570-38288589 None:intergenic 45.0%
AAAACCTTCTGCGGACTCAT+TGG + chr7_3:38288598-38288617 None:intergenic 45.0%
GGCTACCTAAACACTGACAA+AGG - chr7_3:38288678-38288697 Msa1103160:CDS 45.0%
! GTCCAGTTCGTGAGTTTGTT+AGG - chr7_3:38289178-38289197 Msa1103160:intron 45.0%
GAAAGACTGGGAAACAGTGT+TGG - chr7_3:38289239-38289258 Msa1103160:intron 45.0%
ATGGAATTCTCAGTACGTCC+AGG + chr7_3:38290125-38290144 None:intergenic 45.0%
GCAATAGATCATTCCTCCAC+TGG - chr7_3:38288528-38288547 Msa1103160:CDS 45.0%
GATCATAAGAAAGGGACCAG+TGG + chr7_3:38288547-38288566 None:intergenic 45.0%
GTAGGTTTGAATGCAAGGCT+TGG + chr7_3:38288570-38288589 None:intergenic 45.0%
AAAACCTTCTGCGGACTCAT+TGG + chr7_3:38288598-38288617 None:intergenic 45.0%
GGCTACCTAAACACTGACAA+AGG - chr7_3:38288678-38288697 Msa1103160:CDS 45.0%
! GTCCAGTTCGTGAGTTTGTT+AGG - chr7_3:38289178-38289197 Msa1103160:intron 45.0%
GAAAGACTGGGAAACAGTGT+TGG - chr7_3:38289239-38289258 Msa1103160:intron 45.0%
ATGGAATTCTCAGTACGTCC+AGG + chr7_3:38290125-38290144 None:intergenic 45.0%
CATAAGAAAGGGACCAGTGG+AGG + chr7_3:38288544-38288563 None:intergenic 50.0%
!! AGGCAAATGGACTGCAGATG+AGG - chr7_3:38288926-38288945 Msa1103160:intron 50.0%
!! AATGGACTGCAGATGAGGAC+AGG - chr7_3:38288931-38288950 Msa1103160:intron 50.0%
GCCCTAACAAACTCACGAAC+TGG + chr7_3:38289183-38289202 None:intergenic 50.0%
! GGAAACAGTGTTGGGAGAGA+TGG - chr7_3:38289248-38289267 Msa1103160:intron 50.0%
GCATCCTCCTCTTCATTCCA+TGG + chr7_3:38290041-38290060 None:intergenic 50.0%
TGAAGATTGGGCAACCCAAG+AGG - chr7_3:38290328-38290347 Msa1103160:CDS 50.0%
GCAACCCAAGAGGATGATGT+TGG - chr7_3:38290338-38290357 Msa1103160:CDS 50.0%
ACCCAAGAGGATGATGTTGG+TGG - chr7_3:38290341-38290360 Msa1103160:CDS 50.0%
GCCACCAACATCATCCTCTT+GGG + chr7_3:38290345-38290364 None:intergenic 50.0%
AGCCACCAACATCATCCTCT+TGG + chr7_3:38290346-38290365 None:intergenic 50.0%
CATAAGAAAGGGACCAGTGG+AGG + chr7_3:38288544-38288563 None:intergenic 50.0%
!! AGGCAAATGGACTGCAGATG+AGG - chr7_3:38288926-38288945 Msa1103160:intron 50.0%
!! AATGGACTGCAGATGAGGAC+AGG - chr7_3:38288931-38288950 Msa1103160:intron 50.0%
GCCCTAACAAACTCACGAAC+TGG + chr7_3:38289183-38289202 None:intergenic 50.0%
! GGAAACAGTGTTGGGAGAGA+TGG - chr7_3:38289248-38289267 Msa1103160:intron 50.0%
GCATCCTCCTCTTCATTCCA+TGG + chr7_3:38290041-38290060 None:intergenic 50.0%
TGAAGATTGGGCAACCCAAG+AGG - chr7_3:38290328-38290347 Msa1103160:CDS 50.0%
GCAACCCAAGAGGATGATGT+TGG - chr7_3:38290338-38290357 Msa1103160:CDS 50.0%
ACCCAAGAGGATGATGTTGG+TGG - chr7_3:38290341-38290360 Msa1103160:CDS 50.0%
GCCACCAACATCATCCTCTT+GGG + chr7_3:38290345-38290364 None:intergenic 50.0%
AGCCACCAACATCATCCTCT+TGG + chr7_3:38290346-38290365 None:intergenic 50.0%
GCGGACTCATTGGTGTGTGT+AGG + chr7_3:38288588-38288607 None:intergenic 55.0%
CACACCAATGAGTCCGCAGA+AGG - chr7_3:38288591-38288610 Msa1103160:CDS 55.0%
GAAGGGGCCATGGAATGAAG+AGG - chr7_3:38290031-38290050 Msa1103160:CDS 55.0%
GCGGACTCATTGGTGTGTGT+AGG + chr7_3:38288588-38288607 None:intergenic 55.0%
CACACCAATGAGTCCGCAGA+AGG - chr7_3:38288591-38288610 Msa1103160:CDS 55.0%
GAAGGGGCCATGGAATGAAG+AGG - chr7_3:38290031-38290050 Msa1103160:CDS 55.0%
GGGGCCATGGAATGAAGAGG+AGG - chr7_3:38290034-38290053 Msa1103160:CDS 60.0%
GGGGCCATGGAATGAAGAGG+AGG - chr7_3:38290034-38290053 Msa1103160:CDS 60.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 38288387 38290427 38288387 ID=Msa1103160;Name=Msa1103160
chr7_3 mRNA 38288387 38290427 38288387 ID=Msa1103160-mRNA-1;Parent=Msa1103160;Name=Msa1103160-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|3|0|362
chr7_3 exon 38289862 38290427 38289862 ID=Msa1103160-mRNA-1:exon:7821;Parent=Msa1103160-mRNA-1
chr7_3 exon 38289517 38289643 38289517 ID=Msa1103160-mRNA-1:exon:7820;Parent=Msa1103160-mRNA-1
chr7_3 exon 38288387 38288782 38288387 ID=Msa1103160-mRNA-1:exon:7819;Parent=Msa1103160-mRNA-1
chr7_3 CDS 38289862 38290427 38289862 ID=Msa1103160-mRNA-1:cds;Parent=Msa1103160-mRNA-1
chr7_3 CDS 38289517 38289643 38289517 ID=Msa1103160-mRNA-1:cds;Parent=Msa1103160-mRNA-1
chr7_3 CDS 38288387 38288782 38288387 ID=Msa1103160-mRNA-1:cds;Parent=Msa1103160-mRNA-1
Gene Sequence

>Msa1103160

ATGGAGTTTAATCCAAATTACATAGAAAATGTTCCCTATATCTATGGGGTTTTCCCTCTAAATCAATGCATGAAACCAGAGATTTGTACTATGGTTTCTTTTCCACCTCTTAATGATGCTAACCATCATTTTGTTTTGGCTGCAATAGATCATTCCTCCACTGGTCCCTTTCTTATGATCCCAAGCCTTGCATTCAAACCTACACACACCAATGAGTCCGCAGAAGGTTTTGTCAATAATTTTGACTCCATGGACTTTGTAAAAAACAATAACAAAATGGAAGTTGTGCATGGCTACCTAAACACTGACAAAGGATTTTGGAATTTCTACCAAAACAATTCCCTTCAATCTAGTAAACCTTCAGAACCTCAAATCCAAGAAATGATGTTTAAGCTCCAAGAACATCTTTATTCCATTGATAGAACTGAAAACAACCCCCTGTATGCTAATCAAAGACTCATTCTTGTTGACAAGAACCAACAAAAGAGTGATCAAGTAAAGAATAATGAAATTTTGACCAAAGTTACTCATACAATCAAAGGCAAATGGACTGCAGATGAGGACAGCATTCTTGTCCAGTTCGTGAGTTTGTTAGGGCTTAAACAATGGTCATATATTGCTGAATTCTTGGATGGAAAGACTGGGAAACAGTGTTGGGAGAGATGGACTAACCATCTTCAACCAAATATTAGGAAGGGGCCATGGAATGAAGAGGAGGATGCAATTCTAATTGATGCTCATAAAGAAGTTGGGAACAAGTGGGCAGAAATTTCAAAGAGATTGCCTGGACGTACTGAGAATTCCATCAAGAATCATTGGAATGCTACTAAGAGGAGTCTGAAATCCAAGATGAAATTAGAAAAGAGGAGCAACACTAGTCCAAGAAGAAAATTGCTTCAAAACTATATTAGGGAAGTCACAATTGCTCAAGATTGTGAAAAGGAAATGATGGATAATGGGAATGAGGATGACAACAATGACTTCAACTATGAAGATTGGGCAACCCAAGAGGATGATGTTGGTGGCTATATTGATGGAAATGAAATGAAAAATGGATATGGCATAATGGATTATGAGGTTAGAATCTAG
Protein sequence

>Msa1103160

MEFNPNYIENVPYIYGVFPLNQCMKPEICTMVSFPPLNDANHHFVLAAIDHSSTGPFLMIPSLAFKPTHTNESAEGFVNNFDSMDFVKNNNKMEVVHGYLNTDKGFWNFYQNNSLQSSKPSEPQIQEMMFKLQEHLYSIDRTENNPLYANQRLILVDKNQQKSDQVKNNEILTKVTHTIKGKWTADEDSILVQFVSLLGLKQWSYIAEFLDGKTGKQCWERWTNHLQPNIRKGPWNEEEDAILIDAHKEVGNKWAEISKRLPGRTENSIKNHWNATKRSLKSKMKLEKRSNTSPRRKLLQNYIREVTIAQDCEKEMMDNGNEDDNNDFNYEDWATQEDDVGGYIDGNEMKNGYGIMDYEVRI*