AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1106550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1106550 MtrunA17_Chr7g0238921 94.637 317 16 1 1 316 1 317 0.0 622
Msa1106550 MtrunA17_Chr5g0418781 41.509 159 74 5 124 273 124 272 3.32e-25 102
Msa1106550 MtrunA17_Chr4g0051881 71.930 57 16 0 124 180 178 234 3.91e-23 97.8
Msa1106550 MtrunA17_Chr2g0294231 52.941 85 29 1 124 197 203 287 1.58e-22 96.7
Msa1106550 MtrunA17_Chr7g0270191 38.217 157 72 5 124 268 145 288 3.57e-22 94.4
Msa1106550 MtrunA17_Chr1g0194481 66.667 57 19 0 124 180 158 214 5.93e-22 94.4
Msa1106550 MtrunA17_Chr1g0150801 64.912 57 20 0 124 180 102 158 1.15e-21 89.7
Msa1106550 MtrunA17_Chr5g0443131 66.667 57 19 0 124 180 157 213 2.90e-21 92.0
Msa1106550 MtrunA17_Chr8g0383351 64.912 57 20 0 124 180 160 216 3.82e-21 90.1
Msa1106550 MtrunA17_Chr3g0129321 59.322 59 24 0 122 180 116 174 9.68e-21 88.6
Msa1106550 MtrunA17_Chr3g0106491 64.912 57 20 0 124 180 365 421 1.25e-20 92.0
Msa1106550 MtrunA17_Chr3g0106491 59.649 57 22 1 124 180 198 253 1.34e-14 74.3
Msa1106550 MtrunA17_Chr7g0224801 61.404 57 22 0 124 180 93 149 1.35e-20 87.0
Msa1106550 MtrunA17_Chr3g0129361 64.912 57 20 0 124 180 144 200 1.50e-20 88.2
Msa1106550 MtrunA17_Chr5g0445311 63.158 57 21 0 124 180 364 420 1.71e-20 92.0
Msa1106550 MtrunA17_Chr5g0445311 57.895 57 23 1 124 180 200 255 2.04e-13 70.9
Msa1106550 MtrunA17_Chr5g0418191 62.712 59 22 0 122 180 318 376 2.21e-20 90.9
Msa1106550 MtrunA17_Chr5g0418191 59.322 59 23 1 123 181 150 207 9.84e-15 74.3
Msa1106550 MtrunA17_Chr3g0101131 63.158 57 21 0 124 180 415 471 2.56e-20 91.3
Msa1106550 MtrunA17_Chr3g0101131 41.284 109 49 3 86 180 191 298 1.01e-13 71.6
Msa1106550 MtrunA17_Chr4g0068541 44.118 102 56 1 81 182 166 266 5.49e-20 89.7
Msa1106550 MtrunA17_Chr3g0079691 46.226 106 44 3 124 223 495 593 1.11e-19 89.7
Msa1106550 MtrunA17_Chr3g0079691 51.429 70 33 1 115 184 271 339 3.65e-14 73.2
Msa1106550 MtrunA17_Chr5g0432161 36.054 147 75 3 124 270 421 548 1.15e-19 89.4
Msa1106550 MtrunA17_Chr5g0432161 63.158 57 20 1 124 180 244 299 6.60e-16 78.2
Msa1106550 MtrunA17_Chr7g0218081 61.017 59 23 0 122 180 408 466 1.86e-19 88.6
Msa1106550 MtrunA17_Chr7g0218081 56.667 60 21 2 123 180 227 283 3.76e-13 69.7
Msa1106550 MtrunA17_Chr8g0335811 49.438 89 41 1 96 180 122 210 4.69e-19 84.3
Msa1106550 MtrunA17_Chr4g0042831 59.322 59 24 0 122 180 276 334 5.04e-19 86.7
Msa1106550 MtrunA17_Chr4g0042831 30.667 150 90 5 34 180 63 201 1.10e-14 73.9
Msa1106550 MtrunA17_Chr8g0383251 55.932 59 26 0 122 180 106 164 6.03e-19 82.8
Msa1106550 MtrunA17_Chr5g0447701 58.333 60 25 0 121 180 249 308 1.26e-18 85.5
Msa1106550 MtrunA17_Chr4g0074001 48.684 76 38 1 106 180 340 415 2.24e-18 85.5
Msa1106550 MtrunA17_Chr1g0147881 38.261 115 64 4 71 180 207 319 2.26e-18 84.3
Msa1106550 MtrunA17_Chr1g0188941 57.895 57 24 0 124 180 51 107 2.77e-18 79.3
Msa1106550 MtrunA17_Chr7g0263531 60.714 56 22 0 125 180 362 417 4.15e-18 84.3
Msa1106550 MtrunA17_Chr7g0263531 58.929 56 22 1 125 180 190 244 1.35e-13 70.9
Msa1106550 MtrunA17_Chr7g0243891 59.649 57 23 0 124 180 374 430 6.26e-18 84.3
Msa1106550 MtrunA17_Chr7g0243891 59.649 57 22 1 124 180 216 271 1.23e-15 77.4
Msa1106550 MtrunA17_Chr3g0136961 34.503 171 91 6 41 208 72 224 8.38e-18 82.0
Msa1106550 MtrunA17_Chr1g0184691 49.367 79 36 2 110 184 276 354 8.93e-18 82.8
Msa1106550 MtrunA17_Chr7g0248721 61.404 57 21 1 124 180 141 196 9.86e-18 80.5
Msa1106550 MtrunA17_Chr4g0004911 59.649 57 23 0 124 180 336 392 2.00e-17 82.8
Msa1106550 MtrunA17_Chr4g0004911 59.649 57 23 0 124 180 184 240 4.14e-17 81.6
Msa1106550 MtrunA17_Chr7g0249301 57.895 57 24 0 124 180 292 348 2.82e-17 81.6
Msa1106550 MtrunA17_Chr7g0249301 53.571 56 25 1 125 180 63 117 1.54e-11 64.7
Msa1106550 MtrunA17_Chr7g0249311 57.895 57 24 0 124 180 392 448 3.08e-17 82.4
Msa1106550 MtrunA17_Chr7g0249311 54.839 62 27 1 119 180 174 234 2.61e-13 70.5
Msa1106550 MtrunA17_Chr4g0071521 36.220 127 69 4 64 180 178 302 3.42e-17 80.9
Msa1106550 MtrunA17_Chr7g0270051 57.576 66 27 1 116 180 45 110 4.22e-17 79.7
Msa1106550 MtrunA17_Chr7g0228941 43.750 80 39 3 107 180 30 109 4.31e-17 76.3
Msa1106550 MtrunA17_Chr8g0386241 50.877 57 28 0 124 180 103 159 5.52e-17 77.4
Msa1106550 MtrunA17_Chr1g0150281 56.140 57 24 1 125 180 141 197 7.63e-17 79.3
Msa1106550 MtrunA17_Chr3g0139021 43.373 83 43 2 106 184 293 375 1.09e-16 80.1
Msa1106550 MtrunA17_Chr8g0379461 50.633 79 37 2 107 184 59 136 1.68e-16 77.4
Msa1106550 MtrunA17_Chr8g0348311 48.718 78 37 2 106 182 139 214 1.99e-16 79.0
Msa1106550 MtrunA17_Chr5g0401821 45.570 79 39 2 106 180 178 256 2.27e-16 77.8
Msa1106550 MtrunA17_Chr2g0293481 43.299 97 48 2 91 180 228 324 2.44e-16 79.3
Msa1106550 MtrunA17_Chr4g0053281 45.570 79 39 2 106 180 245 323 2.76e-16 78.2
Msa1106550 MtrunA17_Chr2g0333851 52.632 57 26 1 125 180 170 226 6.09e-16 77.0
Msa1106550 MtrunA17_Chr8g0387981 32.000 150 90 5 36 178 45 189 8.54e-16 77.0
Msa1106550 MtrunA17_Chr1g0202461 53.968 63 28 1 119 180 256 318 9.69e-16 77.0
Msa1106550 MtrunA17_Chr6g0485431 55.172 58 25 1 124 180 154 211 1.20e-15 76.6
Msa1106550 MtrunA17_Chr1g0189391 56.897 58 24 1 124 180 97 154 1.34e-15 76.3
Msa1106550 MtrunA17_Chr2g0284321 54.098 61 27 1 125 184 36 96 2.43e-15 73.9
Msa1106550 MtrunA17_Chr2g0322391 42.857 91 48 3 95 184 323 410 4.29e-15 75.9
Msa1106550 MtrunA17_Chr4g0060271 58.621 58 23 1 124 180 255 312 4.53e-15 75.9
Msa1106550 MtrunA17_Chr3g0099641 42.353 85 33 2 125 208 252 321 5.46e-15 75.1
Msa1106550 MtrunA17_Chr7g0216891 48.611 72 35 2 110 180 206 276 5.66e-15 75.5
Msa1106550 MtrunA17_Chr8g0387501 53.226 62 28 1 120 180 125 186 7.67e-15 73.6
Msa1106550 MtrunA17_Chr2g0319961 57.895 57 23 1 125 180 81 137 1.10e-14 72.8
Msa1106550 MtrunA17_Chr3g0126391 57.377 61 23 1 121 178 130 190 1.21e-14 73.6
Msa1106550 MtrunA17_Chr4g0051181 47.222 72 36 2 110 180 230 300 1.23e-14 74.3
Msa1106550 MtrunA17_Chr4g0075201 40.000 100 44 2 82 180 240 324 1.42e-14 73.9
Msa1106550 MtrunA17_Chr2g0288871 38.938 113 52 3 70 180 265 362 1.55e-14 73.9
Msa1106550 MtrunA17_Chr7g0270831 56.667 60 25 1 122 180 214 273 3.34e-14 72.8
Msa1106550 MtrunA17_Chr7g0248691 54.839 62 27 1 122 182 152 213 3.37e-14 72.0
Msa1106550 MtrunA17_Chr4g0001361 52.632 57 26 1 125 180 163 219 3.50e-14 72.0
Msa1106550 MtrunA17_Chr2g0289181 48.052 77 34 3 122 193 12 87 8.77e-14 69.7
Msa1106550 MtrunA17_Chr1g0150271 50.877 57 27 1 125 180 102 158 1.07e-13 69.7
Msa1106550 MtrunA17_Chr2g0302391 52.632 57 26 1 125 180 212 268 7.44e-13 68.9
Msa1106550 MtrunA17_Chr7g0275531 49.275 69 28 2 117 178 107 175 1.25e-12 67.4
Msa1106550 MtrunA17_Chr8g0347251 44.737 76 35 2 110 178 118 193 3.04e-12 66.6
Msa1106550 MtrunA17_Chr5g0432071 50.000 58 28 1 124 181 104 160 4.96e-12 64.3
Msa1106550 MtrunA17_Chr8g0334541 53.448 58 24 1 124 178 103 160 1.69e-11 63.9
Msa1106550 MtrunA17_Chr8g0350621 51.724 58 25 1 124 178 111 168 2.07e-11 63.2
Msa1106550 MtrunA17_Chr4g0025051 50.877 57 27 1 125 180 336 392 2.38e-11 64.3
Msa1106550 MtrunA17_Chr2g0315381 49.231 65 30 1 122 183 142 206 4.40e-11 62.8
Msa1106550 MtrunA17_Chr7g0244981 51.724 58 25 1 124 178 122 179 6.21e-11 62.0
Msa1106550 MtrunA17_Chr3g0128671 52.632 57 24 1 125 178 128 184 6.62e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1106550 AT5G43290.1 42.529 261 120 11 30 275 21 266 2.99e-52 173
Msa1106550 AT1G69310.4 41.558 154 74 4 124 274 147 287 4.70e-28 110
Msa1106550 AT1G69310.2 41.558 154 74 4 124 274 147 287 4.70e-28 110
Msa1106550 AT1G69310.1 41.558 154 74 4 124 274 147 287 4.70e-28 110
Msa1106550 AT5G49520.1 33.149 181 99 3 124 285 221 398 7.01e-25 103
Msa1106550 AT1G69310.3 38.961 154 74 5 124 274 147 283 1.23e-22 95.9
Msa1106550 AT4G39410.1 55.844 77 34 0 124 200 223 299 1.44e-22 95.9
Msa1106550 AT2G47260.1 66.102 59 20 0 124 182 174 232 1.76e-22 96.3
Msa1106550 AT1G29860.1 68.421 57 18 0 124 180 136 192 3.75e-22 94.4
Msa1106550 AT4G18170.1 68.421 57 18 0 124 180 172 228 6.53e-22 94.4
Msa1106550 AT1G64000.1 64.912 57 20 0 124 180 114 170 1.46e-21 90.9
Msa1106550 AT5G46350.1 66.667 57 19 0 124 180 183 239 4.32e-21 92.4
Msa1106550 AT2G04880.2 63.077 65 24 0 124 188 283 347 6.56e-21 93.2
Msa1106550 AT2G04880.2 67.500 40 13 0 124 163 111 150 1.74e-11 65.1
Msa1106550 AT2G03340.1 62.712 59 22 0 122 180 413 471 6.86e-21 93.2
Msa1106550 AT2G03340.1 45.833 96 40 3 93 180 214 305 9.36e-15 75.1
Msa1106550 AT1G13960.2 62.712 59 22 0 122 180 254 312 7.15e-21 92.0
Msa1106550 AT1G13960.2 62.069 58 21 1 123 180 75 131 4.48e-15 75.5
Msa1106550 AT2G04880.1 63.077 65 24 0 124 188 307 371 8.77e-21 92.8
Msa1106550 AT2G04880.1 67.500 40 13 0 124 163 111 150 1.46e-11 65.5
Msa1106550 AT2G25000.1 33.149 181 102 7 13 180 29 203 9.04e-21 90.5
Msa1106550 AT1G13960.1 62.712 59 22 0 122 180 407 465 1.02e-20 92.8
Msa1106550 AT1G13960.1 62.069 58 21 1 123 180 228 284 3.91e-15 76.3
Msa1106550 AT5G41570.1 63.158 57 21 0 124 180 98 154 1.24e-20 87.8
Msa1106550 AT5G13080.1 61.404 57 22 0 124 180 67 123 4.26e-20 85.5
Msa1106550 AT5G07100.2 63.158 57 21 0 124 180 141 197 5.05e-20 87.0
Msa1106550 AT5G07100.2 54.098 61 28 0 120 180 20 80 2.04e-14 71.6
Msa1106550 AT5G07100.4 63.158 57 21 0 124 180 141 197 5.05e-20 87.0
Msa1106550 AT5G07100.4 54.098 61 28 0 120 180 20 80 2.04e-14 71.6
Msa1106550 AT5G07100.5 63.158 57 21 0 124 180 141 197 5.05e-20 87.0
Msa1106550 AT5G07100.5 54.098 61 28 0 120 180 20 80 2.04e-14 71.6
Msa1106550 AT5G07100.3 63.158 57 21 0 124 180 141 197 5.05e-20 87.0
Msa1106550 AT5G07100.3 54.098 61 28 0 120 180 20 80 2.04e-14 71.6
Msa1106550 AT3G62340.1 64.912 57 20 0 124 180 118 174 6.05e-20 88.2
Msa1106550 AT2G46130.1 63.158 57 21 0 124 180 30 86 8.66e-20 83.6
Msa1106550 AT3G01970.1 59.649 57 23 0 124 180 65 121 1.30e-19 84.0
Msa1106550 AT5G07100.1 63.158 57 21 0 124 180 234 290 1.54e-19 87.8
Msa1106550 AT5G07100.1 39.450 109 48 2 120 228 113 203 2.41e-14 72.8
Msa1106550 AT5G56270.1 63.158 57 21 0 124 180 487 543 1.88e-19 89.4
Msa1106550 AT5G56270.1 57.576 66 27 1 119 184 268 332 2.73e-16 80.1
Msa1106550 AT2G25000.3 33.533 167 93 6 27 180 21 182 2.60e-19 85.9
Msa1106550 AT3G01080.1 61.017 59 23 0 122 180 304 362 4.52e-19 87.4
Msa1106550 AT3G01080.1 58.621 58 23 1 123 180 166 222 3.06e-13 70.5
Msa1106550 AT3G01080.2 61.017 59 23 0 122 180 342 400 4.63e-19 87.8
Msa1106550 AT3G01080.2 59.649 57 22 1 124 180 205 260 2.72e-13 70.5
Msa1106550 AT5G26170.1 57.895 57 24 0 124 180 113 169 5.04e-19 83.2
Msa1106550 AT2G44745.1 63.793 58 21 0 124 181 145 202 6.02e-19 84.3
Msa1106550 AT2G25000.2 33.333 165 92 6 29 180 1 160 7.01e-19 84.3
Msa1106550 AT2G25000.4 33.333 165 92 6 29 180 1 160 7.01e-19 84.3
Msa1106550 AT4G26640.5 61.404 57 22 0 124 180 205 261 8.09e-19 86.7
Msa1106550 AT4G26640.5 59.322 59 23 1 122 180 33 90 5.43e-14 72.4
Msa1106550 AT4G26640.6 61.404 57 22 0 124 180 205 261 8.09e-19 86.7
Msa1106550 AT4G26640.6 59.322 59 23 1 122 180 33 90 5.43e-14 72.4
Msa1106550 AT4G26640.4 61.404 57 22 0 124 180 205 261 8.09e-19 86.7
Msa1106550 AT4G26640.4 59.322 59 23 1 122 180 33 90 5.43e-14 72.4
Msa1106550 AT4G26640.3 61.404 57 22 0 124 180 205 261 8.09e-19 86.7
Msa1106550 AT4G26640.3 59.322 59 23 1 122 180 33 90 5.43e-14 72.4
Msa1106550 AT4G26640.7 61.404 57 22 0 124 180 341 397 9.20e-19 87.0
Msa1106550 AT4G26640.7 59.322 59 23 1 122 180 169 226 4.84e-14 72.8
Msa1106550 AT4G26640.1 61.404 57 22 0 124 180 309 365 9.69e-19 87.0
Msa1106550 AT4G26640.1 59.322 59 23 1 122 180 137 194 5.24e-14 72.8
Msa1106550 AT4G26640.2 61.404 57 22 0 124 180 381 437 1.01e-18 87.0
Msa1106550 AT4G26640.2 59.322 59 23 1 122 180 209 266 5.23e-14 72.8
Msa1106550 AT2G38470.1 61.404 57 22 0 124 180 362 418 5.92e-18 84.7
Msa1106550 AT2G38470.1 62.069 58 21 1 123 180 183 239 1.04e-15 77.8
Msa1106550 AT4G31550.1 50.667 75 33 2 110 180 229 303 9.20e-18 82.8
Msa1106550 AT5G64810.1 54.386 57 26 0 124 180 110 166 9.47e-18 80.5
Msa1106550 AT4G31550.2 50.667 75 33 2 110 180 228 302 9.56e-18 82.8
Msa1106550 AT2G21900.1 54.386 57 26 0 124 180 109 165 1.23e-17 80.1
Msa1106550 AT4G30935.1 46.835 79 41 1 103 180 309 387 1.26e-17 83.6
Msa1106550 AT4G30935.1 53.571 56 25 1 125 180 169 223 2.94e-11 64.3
Msa1106550 AT4G31800.2 54.237 59 26 1 125 182 112 170 1.28e-17 81.3
Msa1106550 AT1G55600.1 54.098 61 28 0 124 184 307 367 1.56e-17 83.2
Msa1106550 AT2G30250.1 62.500 56 21 0 125 180 329 384 1.67e-17 82.8
Msa1106550 AT2G30250.1 56.140 57 24 1 124 180 166 221 1.89e-12 67.8
Msa1106550 AT2G23320.1 46.835 79 38 2 106 180 219 297 2.05e-17 81.6
Msa1106550 AT4G31800.1 54.237 59 26 1 125 182 177 235 2.17e-17 81.6
Msa1106550 AT2G34830.1 41.322 121 59 3 72 180 152 272 3.54e-17 82.0
Msa1106550 AT2G34830.2 41.322 121 59 3 72 180 161 281 4.10e-17 82.0
Msa1106550 AT2G37260.2 57.895 57 24 0 124 180 267 323 4.69e-17 81.3
Msa1106550 AT2G37260.2 58.929 56 22 1 125 180 84 138 4.94e-14 72.4
Msa1106550 AT2G37260.3 57.895 57 24 0 124 180 269 325 4.72e-17 81.3
Msa1106550 AT2G37260.3 58.929 56 22 1 125 180 86 140 5.01e-14 72.4
Msa1106550 AT2G37260.1 57.895 57 24 0 124 180 349 405 4.82e-17 81.6
Msa1106550 AT2G37260.1 58.929 56 22 1 125 180 166 220 4.23e-14 72.8
Msa1106550 AT5G28650.1 49.367 79 36 2 106 180 241 319 5.22e-17 80.9
Msa1106550 AT4G26440.1 56.897 58 25 0 124 181 372 429 7.53e-17 81.6
Msa1106550 AT4G26440.1 46.154 91 33 2 124 214 178 252 4.41e-16 79.3
Msa1106550 AT1G30650.1 45.133 113 52 4 77 180 163 274 9.16e-17 80.9
Msa1106550 AT2G30590.1 42.708 96 49 3 93 184 281 374 9.32e-17 80.5
Msa1106550 AT5G52830.1 60.000 60 23 1 122 180 163 222 1.68e-16 79.3
Msa1106550 AT3G04670.1 48.101 79 37 2 106 180 241 319 1.85e-16 79.3
Msa1106550 AT2G24570.1 49.333 75 34 2 110 180 226 300 3.53e-16 78.2
Msa1106550 AT1G80840.1 54.386 57 25 1 125 180 147 203 8.95e-16 77.0
Msa1106550 AT1G62300.1 40.206 97 56 2 86 180 273 369 1.18e-15 77.8
Msa1106550 AT4G01250.1 48.718 78 37 2 106 182 112 187 1.28e-15 76.3
Msa1106550 AT1G29280.1 57.895 57 23 1 125 180 75 131 1.60e-15 75.5
Msa1106550 AT1G68150.1 44.578 83 44 2 99 180 211 292 1.97e-15 76.6
Msa1106550 AT4G24240.1 41.758 91 47 3 94 180 250 338 2.48e-15 76.3
Msa1106550 AT2G46400.1 48.148 81 34 2 106 178 81 161 5.36e-15 74.7
Msa1106550 AT5G15130.1 56.897 58 24 1 124 180 227 284 9.28e-15 75.1
Msa1106550 AT5G15130.2 56.897 58 24 1 124 180 185 242 9.52e-15 75.1
Msa1106550 AT3G58710.1 52.778 72 30 2 125 195 72 140 1.01e-14 73.6
Msa1106550 AT3G58710.2 52.778 72 30 2 125 195 71 139 1.12e-14 73.2
Msa1106550 AT2G46130.2 56.140 57 21 1 124 180 30 82 1.58e-14 68.9
Msa1106550 AT5G45050.2 43.750 96 50 3 88 180 1115 1209 2.29e-14 74.3
Msa1106550 AT5G45050.1 43.750 96 50 3 88 180 1143 1237 2.35e-14 74.3
Msa1106550 AT4G23550.1 55.000 60 26 1 122 180 138 197 2.58e-14 72.8
Msa1106550 AT5G45050.4 43.750 96 50 3 88 180 1004 1098 2.61e-14 74.3
Msa1106550 AT2G40740.1 56.897 58 22 1 124 178 173 230 3.55e-14 72.0
Msa1106550 AT2G40740.3 56.897 58 22 1 124 178 182 239 3.90e-14 72.0
Msa1106550 AT4G04450.2 53.125 64 29 1 125 187 199 262 4.62e-14 72.8
Msa1106550 AT1G18860.1 45.783 83 42 3 99 180 216 296 8.44e-14 72.4
Msa1106550 AT4G04450.1 53.125 64 29 1 125 187 293 356 8.44e-14 72.4
Msa1106550 AT4G22070.4 55.738 61 26 1 125 184 298 358 1.23e-13 71.6
Msa1106550 AT4G22070.3 55.738 61 26 1 125 184 298 358 1.23e-13 71.6
Msa1106550 AT4G22070.2 55.738 61 26 1 125 184 298 358 1.23e-13 71.6
Msa1106550 AT4G22070.1 55.738 61 26 1 125 184 298 358 1.23e-13 71.6
Msa1106550 AT3G01080.3 59.649 57 22 1 124 180 205 260 1.26e-13 70.9
Msa1106550 AT5G24110.1 35.897 117 58 4 79 178 54 170 5.22e-13 68.9
Msa1106550 AT4G01720.1 55.172 58 25 1 124 180 239 296 8.43e-13 69.3
Msa1106550 AT4G11070.2 52.459 61 26 1 121 178 106 166 3.03e-12 66.2
Msa1106550 AT4G11070.1 52.459 61 26 1 121 178 138 198 3.21e-12 66.6
Msa1106550 AT1G66560.1 49.153 59 27 1 124 179 103 161 4.67e-12 65.5
Msa1106550 AT5G01900.1 41.121 107 48 4 125 216 111 217 5.24e-12 65.5
Msa1106550 AT2G40750.1 50.000 58 26 1 124 178 152 209 1.92e-11 64.7
Msa1106550 AT4G23810.1 50.820 61 27 1 121 178 155 215 1.95e-11 64.3
Msa1106550 AT1G69810.1 49.153 59 28 2 124 180 203 261 2.86e-11 64.3
Msa1106550 AT1G69810.2 49.153 59 28 2 124 180 145 203 3.73e-11 63.5
Msa1106550 AT1G66550.2 44.444 63 32 1 124 183 103 165 6.91e-11 62.0
Msa1106550 AT1G66550.1 35.417 96 45 3 102 183 78 170 7.78e-11 62.0

Find 79 sgRNAs with CRISPR-Local

Find 172 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGAACTTCACTTGCTTTA+TGG 0.118410 7_3:-46534664 None:intergenic
AGAAAATAATTTCTTGTAAT+TGG 0.178549 7_3:+46532350 Msa1106550:CDS
TATAATTGAAATATGAATTT+AGG 0.224485 7_3:-46532266 None:intergenic
TTGTGTACGGTCCAATAAAA+TGG 0.226460 7_3:-46534750 None:intergenic
CTTCACTTGCTTTATGGTCT+TGG 0.238976 7_3:-46534658 None:intergenic
TTGATGAAATTTGTTGAAAT+TGG 0.245417 7_3:-46532576 None:intergenic
TTCATTTCAAATATTTATTC+AGG 0.250036 7_3:+46532502 Msa1106550:CDS
TGAAGAGTTTACCTAGGATT+TGG 0.255247 7_3:-46532852 None:intergenic
CCTCCAGCATCATGGACTTC+TGG 0.277718 7_3:+46534899 Msa1106550:CDS
AGCCCAATCTAGTAATTCTT+TGG 0.285857 7_3:+46534715 Msa1106550:CDS
GTAGCCTTGGACTTCTTTAT+TGG 0.299493 7_3:-46534617 None:intergenic
TTTGTTGAAATTGGTTACTA+TGG 0.312426 7_3:-46532567 None:intergenic
AATTACTAGATTGGGCTTCA+TGG 0.316924 7_3:-46534709 None:intergenic
TCACTATCTACATTGTTTGT+AGG 0.321367 7_3:-46534842 None:intergenic
GATTGTCCCACTATGAAATA+AGG 0.327297 7_3:-46534572 None:intergenic
TTCACTTGCTTTATGGTCTT+GGG 0.328292 7_3:-46534657 None:intergenic
GGATATAGGTGGAGGAAGTA+TGG 0.340368 7_3:+46532807 Msa1106550:CDS
ACTTTGAAAATCAAATGTTT+TGG 0.341685 7_3:+46532765 Msa1106550:CDS
TTCCAAAGAATTACTAGATT+GGG 0.346671 7_3:-46534717 None:intergenic
GAAGAGTTTACCTAGGATTT+GGG 0.355592 7_3:-46532851 None:intergenic
AGGATTTGGGCTATTCTTGA+TGG 0.375798 7_3:-46532838 None:intergenic
AGAAGGGTTGCTTGAAGATA+TGG 0.390745 7_3:+46534799 Msa1106550:CDS
TGCTTATCCTTATTTCATAG+TGG 0.391267 7_3:+46534565 Msa1106550:CDS
TGGACTTCTTTATTGGTGGA+TGG 0.391421 7_3:-46534610 None:intergenic
AAATGAACCTATTAAAAGCT+TGG 0.401637 7_3:-46532486 None:intergenic
GTTCCAAAGAATTACTAGAT+TGG 0.406024 7_3:-46534718 None:intergenic
GCTTCTTAGCACCACACCTT+GGG 0.406138 7_3:-46534475 None:intergenic
CTCCATCATTGTCTTTGACA+TGG 0.406707 7_3:-46532329 None:intergenic
CACTATCTACATTGTTTGTA+GGG 0.407160 7_3:-46534841 None:intergenic
GCCTTGGACTTCTTTATTGG+TGG 0.408974 7_3:-46534614 None:intergenic
TAAGTGATTATGAGAGTGTC+AGG 0.409746 7_3:-46534521 None:intergenic
TGAAGAATCATGACTTAAGT+TGG 0.411681 7_3:-46532458 None:intergenic
GATTGGGTGATGATGGATAT+AGG 0.412049 7_3:+46532793 Msa1106550:CDS
GATACGGTCCAAGAAAATTT+CGG 0.416624 7_3:+46534773 Msa1106550:CDS
GGCAATGGATTGGGTGATGA+TGG 0.417116 7_3:+46532786 Msa1106550:CDS
TGGAGGAGAGTGTGAGGAGA+AGG 0.423028 7_3:-46534882 None:intergenic
GGACTTCTTTATTGGTGGAT+GGG 0.437629 7_3:-46534609 None:intergenic
GAGAGTGTCAGGGTCTTCAT+TGG 0.440141 7_3:-46534510 None:intergenic
TGAAGATATGGTGCCATTCA+TGG 0.441742 7_3:+46534811 Msa1106550:CDS
TCCACCTCTTGTTATGCAGT+TGG 0.445677 7_3:+46534932 Msa1106550:CDS
TCCTTGTGAAGAGGTAGCCT+TGG 0.445914 7_3:-46534630 None:intergenic
TCAGAGTTTCTATATTAGAA+AGG 0.451303 7_3:+46532715 Msa1106550:intron
CAAGAAAATTTCGGCTCAGA+AGG 0.452520 7_3:+46534782 Msa1106550:CDS
ATATGGTGCCATTCATGGTT+AGG 0.460181 7_3:+46534816 Msa1106550:CDS
TGTGTACGGTCCAATAAAAT+GGG 0.485883 7_3:-46534749 None:intergenic
CTTGCTTTATGGTCTTGGGT+TGG 0.490234 7_3:-46534653 None:intergenic
GCTTATCCTTATTTCATAGT+GGG 0.490566 7_3:+46534566 Msa1106550:CDS
CACACTCTCCTCCAGCATCA+TGG 0.498866 7_3:+46534891 Msa1106550:CDS
CTTGGACCGTATCTTGTGTA+CGG 0.501432 7_3:-46534763 None:intergenic
TCAAGAATAGCCCAAATCCT+AGG 0.505398 7_3:+46532841 Msa1106550:CDS
TGCATAACAAGAGGTGGAAG+TGG 0.506302 7_3:-46534927 None:intergenic
GAACAAACAGGAGTTACTAT+AGG 0.514245 7_3:+46534444 Msa1106550:intron
AAACCAGAAGTCCATGATGC+TGG 0.516277 7_3:-46534902 None:intergenic
GTAGGGTTCCTAACCATGAA+TGG 0.519809 7_3:-46534824 None:intergenic
ACTCTCATAATCACTTATGA+AGG 0.527480 7_3:+46534527 Msa1106550:CDS
ATTGGACCGTACACAAGATA+CGG 0.536511 7_3:+46534757 Msa1106550:CDS
TGCTTCTTAGCACCACACCT+TGG 0.538042 7_3:-46534476 None:intergenic
ATATTAATAATTTAAACACT+AGG 0.538963 7_3:-46534962 None:intergenic
ATCCATGTCAAAGACAATGA+TGG 0.541467 7_3:+46532327 Msa1106550:CDS
TTGGGTTGGTCCTTGTGAAG+AGG 0.546121 7_3:-46534639 None:intergenic
AAGGTGTGGTGCTAAGAAGC+AGG 0.570713 7_3:+46534478 Msa1106550:CDS
AAGGATAAGCAAAGTGCAAG+TGG 0.571322 7_3:-46534553 None:intergenic
GCCAACTGCATAACAAGAGG+TGG 0.583245 7_3:-46534933 None:intergenic
AAGAAAATTTCGGCTCAGAA+GGG 0.589966 7_3:+46534783 Msa1106550:CDS
AATTTCTTGTAATTGGTCAG+AGG 0.607735 7_3:+46532357 Msa1106550:CDS
AAAGCAAGTGAAGTTCATGA+AGG 0.612429 7_3:+46534668 Msa1106550:CDS
TCATGTGGCAACATAAGAAG+AGG 0.619719 7_3:-46532418 None:intergenic
TCCAAGGCTACCTCTTCACA+AGG 0.631287 7_3:+46534629 Msa1106550:CDS
AGGTGCACCAACCCAAGGTG+TGG 0.643144 7_3:+46534464 Msa1106550:CDS
ACTATAGGTGCACCAACCCA+AGG 0.643448 7_3:+46534459 Msa1106550:CDS
TCCACCAATAAAGAAGTCCA+AGG 0.645542 7_3:+46534613 Msa1106550:CDS
TAAGCCAACTGCATAACAAG+AGG 0.657613 7_3:-46534936 None:intergenic
GTGATGATGGATATAGGTGG+AGG 0.658043 7_3:+46532799 Msa1106550:CDS
CCAGAAGTCCATGATGCTGG+AGG 0.662453 7_3:-46534899 None:intergenic
TGATGCTGGAGGAGAGTGTG+AGG 0.673878 7_3:-46534888 None:intergenic
TGGGTGATGATGGATATAGG+TGG 0.674806 7_3:+46532796 Msa1106550:CDS
ACTTCAGATACTCTCTCATG+TGG 0.678108 7_3:-46532433 None:intergenic
AAGTGATTATGAGAGTGTCA+GGG 0.690845 7_3:-46534520 None:intergenic
TTCAACAAATTTCATCAACG+AGG 0.694140 7_3:+46532581 Msa1106550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAATTGAAATATGAATTT+AGG - chr7_3:46532269-46532288 None:intergenic 10.0%
!! AGAAAATAATTTCTTGTAAT+TGG + chr7_3:46532350-46532369 Msa1106550:CDS 15.0%
!! TTCATTTCAAATATTTATTC+AGG + chr7_3:46532502-46532521 Msa1106550:CDS 15.0%
!! AAAAAAGAGTTAAAATTCTA+AGG + chr7_3:46533585-46533604 Msa1106550:intron 15.0%
!!! GATAAATAGTTGAATATTTT+AGG - chr7_3:46533749-46533768 None:intergenic 15.0%
!!! TTTTGCACTTTTATTTTTAA+GGG - chr7_3:46534152-46534171 None:intergenic 15.0%
!!! ATTTTGCACTTTTATTTTTA+AGG - chr7_3:46534153-46534172 None:intergenic 15.0%
!!! TTTTGCACTTTTATTTTTAA+GGG - chr7_3:46534152-46534171 None:intergenic 15.0%
!!! ATTTTGCACTTTTATTTTTA+AGG - chr7_3:46534153-46534172 None:intergenic 15.0%
!!! TTGATGAAATTTGTTGAAAT+TGG - chr7_3:46532579-46532598 None:intergenic 20.0%
!!! ACTTTGAAAATCAAATGTTT+TGG + chr7_3:46532765-46532784 Msa1106550:CDS 20.0%
!! TACTATATATATGCATTAAC+AGG - chr7_3:46532953-46532972 None:intergenic 20.0%
!! AATGCATATATATAGTACTT+TGG + chr7_3:46532956-46532975 Msa1106550:intron 20.0%
!! AACATCGTATAAGATTTATA+AGG - chr7_3:46533376-46533395 None:intergenic 20.0%
!!! CATTTTAAGATAACAAAATG+AGG - chr7_3:46533451-46533470 None:intergenic 20.0%
!! TTACTCATTAATCATATAGT+CGG - chr7_3:46533674-46533693 None:intergenic 20.0%
!!! ATATTCAACTATAAAAGTGT+GGG - chr7_3:46533699-46533718 None:intergenic 20.0%
!!! TATAAAATTTGAAACTTGCA+AGG - chr7_3:46533776-46533795 None:intergenic 20.0%
!!! ATTAATGGAATTGTCAATTT+TGG - chr7_3:46534087-46534106 None:intergenic 20.0%
!! AATGAGTTATACATACAAAA+GGG + chr7_3:46534178-46534197 Msa1106550:intron 20.0%
!! AATGAGTTATACATACAAAA+GGG + chr7_3:46534178-46534197 Msa1106550:intron 20.0%
!!! TTTTTAAACCAATCATACTA+TGG - chr7_3:46534276-46534295 None:intergenic 20.0%
! AAATGAACCTATTAAAAGCT+TGG - chr7_3:46532489-46532508 None:intergenic 25.0%
! TTTGTTGAAATTGGTTACTA+TGG - chr7_3:46532570-46532589 None:intergenic 25.0%
!!! CATTTTTTTGTTAACTTGCA+TGG + chr7_3:46532618-46532637 Msa1106550:intron 25.0%
!! ACTTGCATGGTAATTTTATT+AGG + chr7_3:46532631-46532650 Msa1106550:intron 25.0%
! ATTAGACACATCAAATAAGT+TGG - chr7_3:46532676-46532695 None:intergenic 25.0%
! TCAGAGTTTCTATATTAGAA+AGG + chr7_3:46532715-46532734 Msa1106550:intron 25.0%
!!! AAAATCAAATGTTTTGGCAA+TGG + chr7_3:46532771-46532790 Msa1106550:CDS 25.0%
! TATATATGCATTAACAGGAT+TGG - chr7_3:46532948-46532967 None:intergenic 25.0%
!! CTAGACACTATCAATTTTAT+AGG - chr7_3:46533069-46533088 None:intergenic 25.0%
!! CATCAATAATGCTTCATTTT+TGG - chr7_3:46533189-46533208 None:intergenic 25.0%
!!! TCAAACGACTAACATTTTTT+AGG + chr7_3:46533412-46533431 Msa1106550:intron 25.0%
! TGGAAAAATTTACTACTTGT+GGG - chr7_3:46533507-46533526 None:intergenic 25.0%
! TTGGAAAAATTTACTACTTG+TGG - chr7_3:46533508-46533527 None:intergenic 25.0%
! GAGAATGAATGACTATTTAA+AGG - chr7_3:46533645-46533664 None:intergenic 25.0%
!! TATTCAACTATAAAAGTGTG+GGG - chr7_3:46533698-46533717 None:intergenic 25.0%
! GATATTCAACTATAAAAGTG+TGG - chr7_3:46533700-46533719 None:intergenic 25.0%
!! GCAAGTTTCAAATTTTATAG+TGG + chr7_3:46533777-46533796 Msa1106550:intron 25.0%
!! TCTAAAAAATGCTGCTTAAA+AGG + chr7_3:46533823-46533842 Msa1106550:intron 25.0%
! CAATGAGTTATACATACAAA+AGG + chr7_3:46534177-46534196 Msa1106550:intron 25.0%
! CAATGAGTTATACATACAAA+AGG + chr7_3:46534177-46534196 Msa1106550:intron 25.0%
! AATCTTCTCAAATTAGCTAA+GGG - chr7_3:46534374-46534393 None:intergenic 25.0%
! TAATCTTCTCAAATTAGCTA+AGG - chr7_3:46534375-46534394 None:intergenic 25.0%
!!! ATCACAAATTTTTTATGCCA+TGG + chr7_3:46534422-46534441 Msa1106550:intron 25.0%
! TTCCAAAGAATTACTAGATT+GGG - chr7_3:46534720-46534739 None:intergenic 25.0%
AATTTCTTGTAATTGGTCAG+AGG + chr7_3:46532357-46532376 Msa1106550:CDS 30.0%
TGAAGAATCATGACTTAAGT+TGG - chr7_3:46532461-46532480 None:intergenic 30.0%
! CAAAAGACCAAGCTTTTAAT+AGG + chr7_3:46532479-46532498 Msa1106550:CDS 30.0%
!! TTTTCAATATCTGAGATGGT+AGG - chr7_3:46532529-46532548 None:intergenic 30.0%
! AGCATTTTCAATATCTGAGA+TGG - chr7_3:46532533-46532552 None:intergenic 30.0%
TTCAACAAATTTCATCAACG+AGG + chr7_3:46532581-46532600 Msa1106550:CDS 30.0%
TTAGGTTTAGTTGCATGAAT+TGG + chr7_3:46532649-46532668 Msa1106550:intron 30.0%
!!! AAATGTTTTGGCAATGGATT+GGG + chr7_3:46532777-46532796 Msa1106550:CDS 30.0%
!! TAAATCAGCTTTGTTTGAGA+AGG - chr7_3:46532998-46533017 None:intergenic 30.0%
!! GCACTTGTAAGTATTTTAGA+AGG - chr7_3:46533340-46533359 None:intergenic 30.0%
ATCTTAAAATGTAAGCCGTT+TGG + chr7_3:46533460-46533479 Msa1106550:intron 30.0%
! AAGATTTGGAATGTCAACAT+TGG - chr7_3:46533527-46533546 None:intergenic 30.0%
GCAAGTATTTAGGAAAGATT+TGG - chr7_3:46533541-46533560 None:intergenic 30.0%
!! AGTTGAGTTGATACATGTTA+TGG - chr7_3:46533619-46533638 None:intergenic 30.0%
!!! AGGAATGAACATTTTTGGTT+GGG - chr7_3:46533863-46533882 None:intergenic 30.0%
!!! TAGGAATGAACATTTTTGGT+TGG - chr7_3:46533864-46533883 None:intergenic 30.0%
! CAGTTAGGAATGAACATTTT+TGG - chr7_3:46533868-46533887 None:intergenic 30.0%
GGTATTATAGTCATTCAGTT+AGG - chr7_3:46533883-46533902 None:intergenic 30.0%
AACATGAGTTAACTTACGTA+GGG - chr7_3:46533904-46533923 None:intergenic 30.0%
TAACATGAGTTAACTTACGT+AGG - chr7_3:46533905-46533924 None:intergenic 30.0%
!!! TTTTTTTCGGAAGTTTGGTT+GGG + chr7_3:46533982-46534001 Msa1106550:intron 30.0%
ATTCCATTAATGTGTACCTA+AGG + chr7_3:46534096-46534115 Msa1106550:intron 30.0%
TTTATCCACCATAGTATGAT+TGG + chr7_3:46534265-46534284 Msa1106550:intron 30.0%
TTAAACCAATCATACTATGG+TGG - chr7_3:46534273-46534292 None:intergenic 30.0%
ACTCTCATAATCACTTATGA+AGG + chr7_3:46534527-46534546 Msa1106550:CDS 30.0%
! TGCTTATCCTTATTTCATAG+TGG + chr7_3:46534565-46534584 Msa1106550:CDS 30.0%
! GCTTATCCTTATTTCATAGT+GGG + chr7_3:46534566-46534585 Msa1106550:CDS 30.0%
GTTCCAAAGAATTACTAGAT+TGG - chr7_3:46534721-46534740 None:intergenic 30.0%
! ACTCATTTCACCCATTTTAT+TGG + chr7_3:46534739-46534758 Msa1106550:CDS 30.0%
CACTATCTACATTGTTTGTA+GGG - chr7_3:46534844-46534863 None:intergenic 30.0%
TCACTATCTACATTGTTTGT+AGG - chr7_3:46534845-46534864 None:intergenic 30.0%
ATCCATGTCAAAGACAATGA+TGG + chr7_3:46532327-46532346 Msa1106550:CDS 35.0%
!!! CAAATGTTTTGGCAATGGAT+TGG + chr7_3:46532776-46532795 Msa1106550:CDS 35.0%
GAAGAGTTTACCTAGGATTT+GGG - chr7_3:46532854-46532873 None:intergenic 35.0%
TGAAGAGTTTACCTAGGATT+TGG - chr7_3:46532855-46532874 None:intergenic 35.0%
AGAAAGTGAAGAGTTTACCT+AGG - chr7_3:46532861-46532880 None:intergenic 35.0%
!! GCATTAACAGGATTGGTTTA+AGG - chr7_3:46532941-46532960 None:intergenic 35.0%
GATGAAAGACAAGCATTTAG+AGG + chr7_3:46533205-46533224 Msa1106550:intron 35.0%
ACTCAAATTGCACGATTAGT+AGG + chr7_3:46533288-46533307 Msa1106550:intron 35.0%
CAATACACGTGCAAGTATTT+AGG - chr7_3:46533551-46533570 None:intergenic 35.0%
!!! AAGCAGCATTTTTTAGAAGC+TGG - chr7_3:46533820-46533839 None:intergenic 35.0%
!!! GTTTTTTTCGGAAGTTTGGT+TGG + chr7_3:46533981-46534000 Msa1106550:intron 35.0%
AAGAGCAGAATTCGCTTAAA+AGG + chr7_3:46534027-46534046 Msa1106550:intron 35.0%
CAAAAGCTACTACTAGCAAT+GGG - chr7_3:46534123-46534142 None:intergenic 35.0%
ACAAAAGCTACTACTAGCAA+TGG - chr7_3:46534124-46534143 None:intergenic 35.0%
! TTTTATGCCATGGAACAAAC+AGG + chr7_3:46534432-46534451 Msa1106550:intron 35.0%
GAACAAACAGGAGTTACTAT+AGG + chr7_3:46534444-46534463 Msa1106550:intron 35.0%
!! AAGTGATTATGAGAGTGTCA+GGG - chr7_3:46534523-46534542 None:intergenic 35.0%
!! TAAGTGATTATGAGAGTGTC+AGG - chr7_3:46534524-46534543 None:intergenic 35.0%
GATTGTCCCACTATGAAATA+AGG - chr7_3:46534575-46534594 None:intergenic 35.0%
TTCACTTGCTTTATGGTCTT+GGG - chr7_3:46534660-46534679 None:intergenic 35.0%
CATGAACTTCACTTGCTTTA+TGG - chr7_3:46534667-46534686 None:intergenic 35.0%
AAAGCAAGTGAAGTTCATGA+AGG + chr7_3:46534668-46534687 Msa1106550:CDS 35.0%
AATTACTAGATTGGGCTTCA+TGG - chr7_3:46534712-46534731 None:intergenic 35.0%
AGCCCAATCTAGTAATTCTT+TGG + chr7_3:46534715-46534734 Msa1106550:CDS 35.0%
TGTGTACGGTCCAATAAAAT+GGG - chr7_3:46534752-46534771 None:intergenic 35.0%
TTGTGTACGGTCCAATAAAA+TGG - chr7_3:46534753-46534772 None:intergenic 35.0%
GATACGGTCCAAGAAAATTT+CGG + chr7_3:46534773-46534792 Msa1106550:CDS 35.0%
AAGAAAATTTCGGCTCAGAA+GGG + chr7_3:46534783-46534802 Msa1106550:CDS 35.0%
CTCCATCATTGTCTTTGACA+TGG - chr7_3:46532332-46532351 None:intergenic 40.0%
TCATGTGGCAACATAAGAAG+AGG - chr7_3:46532421-46532440 None:intergenic 40.0%
ACTTCAGATACTCTCTCATG+TGG - chr7_3:46532436-46532455 None:intergenic 40.0%
!! GATTGGGTGATGATGGATAT+AGG + chr7_3:46532793-46532812 Msa1106550:CDS 40.0%
AGGATTTGGGCTATTCTTGA+TGG - chr7_3:46532841-46532860 None:intergenic 40.0%
TCAAGAATAGCCCAAATCCT+AGG + chr7_3:46532841-46532860 Msa1106550:CDS 40.0%
CTACGTGAGTTAACTCACAT+AGG + chr7_3:46533935-46533954 Msa1106550:intron 40.0%
!!! AAGTCACGCAGGGTTTTTTT+CGG + chr7_3:46533969-46533988 Msa1106550:intron 40.0%
!!! CAGGGTTTTTTTCGGAAGTT+TGG + chr7_3:46533977-46533996 Msa1106550:intron 40.0%
ACCTTACCTAGTGAATCCTT+TGG + chr7_3:46534055-46534074 Msa1106550:intron 40.0%
CCTTACCTAGTGAATCCTTT+GGG + chr7_3:46534056-46534075 Msa1106550:intron 40.0%
GGTCCTTAGGTACACATTAA+TGG - chr7_3:46534102-46534121 None:intergenic 40.0%
AGTAACTCCTGTTTGTTCCA+TGG - chr7_3:46534442-46534461 None:intergenic 40.0%
AAGGATAAGCAAAGTGCAAG+TGG - chr7_3:46534556-46534575 None:intergenic 40.0%
! GGACTTCTTTATTGGTGGAT+GGG - chr7_3:46534612-46534631 None:intergenic 40.0%
TGGACTTCTTTATTGGTGGA+TGG - chr7_3:46534613-46534632 None:intergenic 40.0%
TCCACCAATAAAGAAGTCCA+AGG + chr7_3:46534613-46534632 Msa1106550:CDS 40.0%
! GTAGCCTTGGACTTCTTTAT+TGG - chr7_3:46534620-46534639 None:intergenic 40.0%
CTTCACTTGCTTTATGGTCT+TGG - chr7_3:46534661-46534680 None:intergenic 40.0%
ATTGGACCGTACACAAGATA+CGG + chr7_3:46534757-46534776 Msa1106550:CDS 40.0%
! CTTCTGAGCCGAAATTTTCT+TGG - chr7_3:46534784-46534803 None:intergenic 40.0%
CAAGAAAATTTCGGCTCAGA+AGG + chr7_3:46534782-46534801 Msa1106550:CDS 40.0%
AGAAGGGTTGCTTGAAGATA+TGG + chr7_3:46534799-46534818 Msa1106550:CDS 40.0%
!! TGAAGATATGGTGCCATTCA+TGG + chr7_3:46534811-46534830 Msa1106550:CDS 40.0%
!! ATATGGTGCCATTCATGGTT+AGG + chr7_3:46534816-46534835 Msa1106550:CDS 40.0%
TAAGCCAACTGCATAACAAG+AGG - chr7_3:46534939-46534958 None:intergenic 40.0%
!! TGGGTGATGATGGATATAGG+TGG + chr7_3:46532796-46532815 Msa1106550:CDS 45.0%
!! GTGATGATGGATATAGGTGG+AGG + chr7_3:46532799-46532818 Msa1106550:CDS 45.0%
GGATATAGGTGGAGGAAGTA+TGG + chr7_3:46532807-46532826 Msa1106550:CDS 45.0%
GTAAGCCGTTTGGTTGAGAT+CGG + chr7_3:46533470-46533489 Msa1106550:intron 45.0%
GTCATCCGATCTCAACCAAA+CGG - chr7_3:46533478-46533497 None:intergenic 45.0%
!! TGGGAGCGAGCATTTTAAGT+TGG + chr7_3:46534001-46534020 Msa1106550:intron 45.0%
!!! GGGAGCGAGCATTTTAAGTT+GGG + chr7_3:46534002-46534021 Msa1106550:intron 45.0%
GGATTCACTAGGTAAGGTGA+GGG - chr7_3:46534053-46534072 None:intergenic 45.0%
AGGATTCACTAGGTAAGGTG+AGG - chr7_3:46534054-46534073 None:intergenic 45.0%
CCCAAAGGATTCACTAGGTA+AGG - chr7_3:46534059-46534078 None:intergenic 45.0%
ACCTAGTGAATCCTTTGGGT+TGG + chr7_3:46534060-46534079 Msa1106550:intron 45.0%
! CCTAGTGAATCCTTTGGGTT+GGG + chr7_3:46534061-46534080 Msa1106550:intron 45.0%
!! TCAATTTTGGCCCAACCCAA+AGG - chr7_3:46534074-46534093 None:intergenic 45.0%
ACTACTAGCAATGGGTCCTT+AGG - chr7_3:46534115-46534134 None:intergenic 45.0%
GCCTTGGACTTCTTTATTGG+TGG - chr7_3:46534617-46534636 None:intergenic 45.0%
! CTTGCTTTATGGTCTTGGGT+TGG - chr7_3:46534656-46534675 None:intergenic 45.0%
CTTGGACCGTATCTTGTGTA+CGG - chr7_3:46534766-46534785 None:intergenic 45.0%
GTAGGGTTCCTAACCATGAA+TGG - chr7_3:46534827-46534846 None:intergenic 45.0%
AAACCAGAAGTCCATGATGC+TGG - chr7_3:46534905-46534924 None:intergenic 45.0%
TGCATAACAAGAGGTGGAAG+TGG - chr7_3:46534930-46534949 None:intergenic 45.0%
! TCCACCTCTTGTTATGCAGT+TGG + chr7_3:46534932-46534951 Msa1106550:CDS 45.0%
!! GGCAATGGATTGGGTGATGA+TGG + chr7_3:46532786-46532805 Msa1106550:CDS 50.0%
TTGCGTGACTTAAGTCACGC+AGG + chr7_3:46533958-46533977 Msa1106550:intron 50.0%
TGCGTGACTTAAGTCACGCA+GGG + chr7_3:46533959-46533978 Msa1106550:intron 50.0%
CCCAACCCAAAGGATTCACT+AGG - chr7_3:46534064-46534083 None:intergenic 50.0%
ACTATAGGTGCACCAACCCA+AGG + chr7_3:46534459-46534478 Msa1106550:CDS 50.0%
GCTTCTTAGCACCACACCTT+GGG - chr7_3:46534478-46534497 None:intergenic 50.0%
TGCTTCTTAGCACCACACCT+TGG - chr7_3:46534479-46534498 None:intergenic 50.0%
! AAGGTGTGGTGCTAAGAAGC+AGG + chr7_3:46534478-46534497 Msa1106550:CDS 50.0%
!! GAGAGTGTCAGGGTCTTCAT+TGG - chr7_3:46534513-46534532 None:intergenic 50.0%
TCCAAGGCTACCTCTTCACA+AGG + chr7_3:46534629-46534648 Msa1106550:CDS 50.0%
TCCTTGTGAAGAGGTAGCCT+TGG - chr7_3:46534633-46534652 None:intergenic 50.0%
!! TTGGGTTGGTCCTTGTGAAG+AGG - chr7_3:46534642-46534661 None:intergenic 50.0%
GCCAACTGCATAACAAGAGG+TGG - chr7_3:46534936-46534955 None:intergenic 50.0%
CTTAGCACCACACCTTGGGT+TGG - chr7_3:46534474-46534493 None:intergenic 55.0%
! TGGAGGAGAGTGTGAGGAGA+AGG - chr7_3:46534885-46534904 None:intergenic 55.0%
! TGATGCTGGAGGAGAGTGTG+AGG - chr7_3:46534891-46534910 None:intergenic 55.0%
CACACTCTCCTCCAGCATCA+TGG + chr7_3:46534891-46534910 Msa1106550:CDS 55.0%
CCAGAAGTCCATGATGCTGG+AGG - chr7_3:46534902-46534921 None:intergenic 55.0%
CCTCCAGCATCATGGACTTC+TGG + chr7_3:46534899-46534918 Msa1106550:CDS 55.0%
AGGTGCACCAACCCAAGGTG+TGG + chr7_3:46534464-46534483 Msa1106550:CDS 60.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 46532256 46534973 46532256 ID=Msa1106550;Name=Msa1106550
chr7_3 mRNA 46532256 46534973 46532256 ID=Msa1106550-mRNA-1;Parent=Msa1106550;Name=Msa1106550-mRNA-1;_AED=0.00;_eAED=0.00;_QI=60|1|0.66|1|1|1|3|0|316
chr7_3 exon 46532256 46532602 46532256 ID=Msa1106550-mRNA-1:exon:9535;Parent=Msa1106550-mRNA-1
chr7_3 exon 46532719 46532862 46532719 ID=Msa1106550-mRNA-1:exon:9536;Parent=Msa1106550-mRNA-1
chr7_3 exon 46534454 46534973 46534454 ID=Msa1106550-mRNA-1:exon:9537;Parent=Msa1106550-mRNA-1
chr7_3 five_prime_UTR 46532256 46532315 46532256 ID=Msa1106550-mRNA-1:five_prime_utr;Parent=Msa1106550-mRNA-1
chr7_3 CDS 46532316 46532602 46532316 ID=Msa1106550-mRNA-1:cds;Parent=Msa1106550-mRNA-1
chr7_3 CDS 46532719 46532862 46532719 ID=Msa1106550-mRNA-1:cds;Parent=Msa1106550-mRNA-1
chr7_3 CDS 46534454 46534973 46534454 ID=Msa1106550-mRNA-1:cds;Parent=Msa1106550-mRNA-1
Gene Sequence

>Msa1106550

ATGATTGACTCATCCATGTCAAAGACAATGATGGAGAAAATAATTTCTTGTAATTGGTCAGAGGATGATGAACTTTTAAGAGAGCTTTTAGTTGATGAGTCTCCTCTTCTTATGTTGCCACATGAGAGAGTATCTGAAGTAACCAACTTAAGTCATGATTCTTCAAAAGACCAAGCTTTTAATAGGTTCATTTCAAATATTTATTCAGGTCCTACCATCTCAGATATTGAAAATGCTTTGTTAGTTACTAACCATAGTAACCAATTTCAACAAATTTCATCAACGAGAGTTTCTATATTAGAAAGGAGTTTGAGTAAGATTGAGAATAAGTATACTTTGAAAATCAAATGTTTTGGCAATGGATTGGGTGATGATGGATATAGGTGGAGGAAGTATGGTCAGAAATCCATCAAGAATAGCCCAAATCCTAGGAGTTACTATAGGTGCACCAACCCAAGGTGTGGTGCTAAGAAGCAGGTTGAGAGATCCAATGAAGACCCTGACACTCTCATAATCACTTATGAAGGACTCCACTTGCACTTTGCTTATCCTTATTTCATAGTGGGACAATCACATAAATCTCATTCCCATCCACCAATAAAGAAGTCCAAGGCTACCTCTTCACAAGGACCAACCCAAGACCATAAAGCAAGTGAAGTTCATGAAGGTCAGAATATACAAGAAGTCCATGAAGCCCAATCTAGTAATTCTTTGGAACTCATTTCACCCATTTTATTGGACCGTACACAAGATACGGTCCAAGAAAATTTCGGCTCAGAAGGGTTGCTTGAAGATATGGTGCCATTCATGGTTAGGAACCCTACAAACAATGTAGATAGTGATGATAACTCAAAATTTTCCTTCTCCTCACACTCTCCTCCAGCATCATGGACTTCTGGTTTTTCCACTTCCACCTCTTGTTATGCAGTTGGCTTAAATCCTAGTGTTTAA
Protein sequence

>Msa1106550

MIDSSMSKTMMEKIISCNWSEDDELLRELLVDESPLLMLPHERVSEVTNLSHDSSKDQAFNRFISNIYSGPTISDIENALLVTNHSNQFQQISSTRVSILERSLSKIENKYTLKIKCFGNGLGDDGYRWRKYGQKSIKNSPNPRSYYRCTNPRCGAKKQVERSNEDPDTLIITYEGLHLHFAYPYFIVGQSHKSHSHPPIKKSKATSSQGPTQDHKASEVHEGQNIQEVHEAQSSNSLELISPILLDRTQDTVQENFGSEGLLEDMVPFMVRNPTNNVDSDDNSKFSFSSHSPPASWTSGFSTSTSCYAVGLNPSV*