Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1106780 | KEH22976.1 | 90.760 | 487 | 45 | 0 | 1 | 487 | 1 | 487 | 0.0 | 877 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1106780 | sp|Q9ATB4|TAD2B_ARATH | 56.612 | 484 | 178 | 8 | 18 | 485 | 18 | 485 | 0.0 | 525 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1106780 | A0A072U0P5 | 90.760 | 487 | 45 | 0 | 1 | 487 | 1 | 487 | 0.0 | 877 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1106780 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1106780 | MtrunA17_Chr7g0239471 | 90.760 | 487 | 45 | 0 | 1 | 487 | 1 | 487 | 0.0 | 877 |
| Msa1106780 | MtrunA17_Chr2g0290321 | 71.695 | 537 | 81 | 8 | 18 | 487 | 19 | 551 | 0.0 | 744 |
| Msa1106780 | MtrunA17_Chr2g0290341 | 67.928 | 502 | 99 | 5 | 34 | 487 | 19 | 506 | 0.0 | 663 |
| Msa1106780 | MtrunA17_Chr3g0120841 | 47.963 | 540 | 207 | 8 | 18 | 483 | 21 | 560 | 7.22e-153 | 447 |
| Msa1106780 | MtrunA17_Chr3g0120231 | 65.865 | 208 | 59 | 1 | 292 | 487 | 2 | 209 | 1.70e-86 | 264 |
| Msa1106780 | MtrunA17_Chr3g0120221 | 61.728 | 162 | 60 | 1 | 18 | 177 | 16 | 177 | 1.65e-68 | 217 |
| Msa1106780 | MtrunA17_Chr3g0120201 | 46.565 | 262 | 119 | 5 | 237 | 483 | 6 | 261 | 3.85e-68 | 219 |
| Msa1106780 | MtrunA17_Chr7g0238851 | 90.909 | 77 | 7 | 0 | 19 | 95 | 5 | 81 | 4.09e-37 | 132 |
| Msa1106780 | MtrunA17_Chr3g0120191 | 61.644 | 73 | 28 | 0 | 107 | 179 | 11 | 83 | 3.44e-28 | 108 |
| Msa1106780 | MtrunA17_Chr3g0120181 | 72.414 | 58 | 16 | 0 | 38 | 95 | 2 | 59 | 7.07e-27 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1106780 | AT4G16420.3 | 56.729 | 483 | 178 | 8 | 18 | 485 | 18 | 484 | 0.0 | 526 |
| Msa1106780 | AT4G16420.2 | 56.846 | 482 | 176 | 8 | 18 | 485 | 18 | 481 | 0.0 | 525 |
| Msa1106780 | AT4G16420.1 | 56.612 | 484 | 178 | 8 | 18 | 485 | 18 | 485 | 0.0 | 525 |
| Msa1106780 | AT3G07740.1 | 43.702 | 524 | 238 | 8 | 19 | 485 | 22 | 545 | 1.37e-136 | 405 |
| Msa1106780 | AT3G07740.3 | 43.960 | 505 | 227 | 7 | 37 | 485 | 20 | 524 | 1.17e-135 | 402 |
| Msa1106780 | AT3G07740.4 | 43.126 | 531 | 238 | 9 | 19 | 485 | 22 | 552 | 7.08e-134 | 398 |
| Msa1106780 | AT3G07740.2 | 43.552 | 473 | 211 | 7 | 69 | 485 | 2 | 474 | 5.01e-122 | 365 |
Find 112 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATATTATAGGATCGGATTC+TGG | 0.183755 | 7_3:-47347658 | Msa1106780:intron |
| TCGTCGTTTCTTGAGGATTT+TGG | 0.221990 | 7_3:+47347413 | None:intergenic |
| ACAGACTCCTTAAGAAATTC+TGG | 0.251102 | 7_3:-47347446 | Msa1106780:intron |
| AAGAAACGACGACCCTTCTT+TGG | 0.270029 | 7_3:-47347402 | Msa1106780:CDS |
| AAATGTATGGCATGAATAAC+TGG | 0.272278 | 7_3:-47348159 | Msa1106780:CDS |
| AGTAGCTCGCCCTGCAGGTC+TGG | 0.289473 | 7_3:+47346653 | None:intergenic |
| AAATGTATGTGCTGCGAGTT+AGG | 0.296126 | 7_3:-47346475 | Msa1106780:CDS |
| TGATACATATCTATAATAAA+AGG | 0.299266 | 7_3:-47347247 | Msa1106780:intron |
| AGTTCTGTGTTCAGAGATAA+TGG | 0.309266 | 7_3:+47346934 | None:intergenic |
| GAAAAGAATTCAAGAGCTTA+AGG | 0.314875 | 7_3:-47346909 | Msa1106780:intron |
| ATGCTCATTAAGAAGGGATT+TGG | 0.323014 | 7_3:-47346319 | Msa1106780:CDS |
| CTCTCCATGCTTCCCTCTTC+CGG | 0.329198 | 7_3:-47348062 | Msa1106780:intron |
| ACAAAAGCAATCATGCTTAC+AGG | 0.334147 | 7_3:-47348603 | Msa1106780:CDS |
| TCAACACATAAGTCAAAATC+TGG | 0.338230 | 7_3:+47348658 | None:intergenic |
| TTTGGAACCCCGCGATTGTT+CGG | 0.352779 | 7_3:+47346705 | None:intergenic |
| TTGGAACCCCGCGATTGTTC+GGG | 0.360592 | 7_3:+47346706 | None:intergenic |
| ACACTATAGGATTGTGTACT+TGG | 0.367311 | 7_3:-47348086 | Msa1106780:CDS |
| TACTGTAATATCGATATTAC+AGG | 0.392999 | 7_3:-47348709 | Msa1106780:CDS |
| TTCAAGTTATGTCAATGAAA+TGG | 0.396353 | 7_3:-47346631 | Msa1106780:CDS |
| TAGGATATGTCTCATGTTGT+TGG | 0.396671 | 7_3:-47347949 | Msa1106780:CDS |
| ACCCTCTCATTTGCCCCGAC+TGG | 0.397600 | 7_3:-47348339 | Msa1106780:CDS |
| ATACACCATGTCAACTTTCA+TGG | 0.399055 | 7_3:+47346345 | None:intergenic |
| GGTGTTAAATCCTTCTCAAA+TGG | 0.404781 | 7_3:+47347037 | None:intergenic |
| ATTTCCTCCAGAATTTCTTA+AGG | 0.405009 | 7_3:+47347439 | None:intergenic |
| TCCGCAGACATCAAGGCATT+TGG | 0.409190 | 7_3:+47346687 | None:intergenic |
| TGCAGGTGGAACTAACAAAA+AGG | 0.414771 | 7_3:-47347614 | Msa1106780:CDS |
| TCGCAGGAAGCTCGTGCTGC+TGG | 0.418619 | 7_3:-47346792 | Msa1106780:intron |
| AGTGGAGATAACTCAGAATC+TGG | 0.422645 | 7_3:-47349296 | Msa1106780:CDS |
| TCTTCATCCGCGTTCCAGTC+GGG | 0.425170 | 7_3:+47348325 | None:intergenic |
| TCTGCTGATCCCAGACCTGC+AGG | 0.434755 | 7_3:-47346663 | Msa1106780:CDS |
| ATATTATAGGATCGGATTCT+GGG | 0.435344 | 7_3:-47347657 | Msa1106780:intron |
| TCTTGCCATGGGGAAAGGGC+AGG | 0.439550 | 7_3:-47347908 | Msa1106780:CDS |
| GTAGCTCGCCCTGCAGGTCT+GGG | 0.445211 | 7_3:+47346654 | None:intergenic |
| TCCAATAGAGGCCGGGGAAA+AGG | 0.446039 | 7_3:-47347589 | Msa1106780:intron |
| GTTCATGCGCTTTCATACTA+AGG | 0.450239 | 7_3:-47346981 | Msa1106780:CDS |
| CTGTCAGTACAAATGATTGC+TGG | 0.451807 | 7_3:-47346415 | Msa1106780:CDS |
| AAGTTGAAGAAAGTGCCCTT+AGG | 0.452945 | 7_3:-47346752 | Msa1106780:CDS |
| GGCACACGGCACACTTAATC+CGG | 0.453805 | 7_3:+47348680 | None:intergenic |
| TGAGCAATTACTCGCTGATA+TGG | 0.455025 | 7_3:-47347318 | Msa1106780:CDS |
| AACTCAGAATCTGGAGCTGC+AGG | 0.455987 | 7_3:-47349287 | Msa1106780:intron |
| GGATTTAACACCAGAGGAAA+AGG | 0.457443 | 7_3:-47347026 | Msa1106780:CDS |
| AACTTCTTGCCATGGGGAAA+GGG | 0.466541 | 7_3:-47347912 | Msa1106780:CDS |
| AGGCATGCACTGAACACTAT+AGG | 0.474478 | 7_3:-47348099 | Msa1106780:CDS |
| AAGGAGCGGGTGAAGCGAAA+AGG | 0.478432 | 7_3:-47348750 | Msa1106780:CDS |
| CCACTAGCTTCAACCAAAGA+AGG | 0.482411 | 7_3:+47347389 | None:intergenic |
| AAGCACTTTCTCTTGCCCTA+AGG | 0.483082 | 7_3:+47346736 | None:intergenic |
| GAACTTCTTGCCATGGGGAA+AGG | 0.484313 | 7_3:-47347913 | Msa1106780:CDS |
| ATGTGGTCCCGAACAATCGC+GGG | 0.490676 | 7_3:-47346713 | Msa1106780:CDS |
| CTTGAAGTAGCTCGCCCTGC+AGG | 0.492075 | 7_3:+47346648 | None:intergenic |
| TTCTTCATCCGCGTTCCAGT+CGG | 0.492141 | 7_3:+47348324 | None:intergenic |
| CTTCATCCGCGTTCCAGTCG+GGG | 0.497867 | 7_3:+47348326 | None:intergenic |
| GAAGCATCTCATACCGGAAG+AGG | 0.499604 | 7_3:+47348049 | None:intergenic |
| GTATGATATGCTCATTAAGA+AGG | 0.500449 | 7_3:-47346326 | Msa1106780:CDS |
| AAAGGCATCCAATAGAGGCC+GGG | 0.501091 | 7_3:-47347596 | Msa1106780:CDS |
| TCGATATTACAGGACAAATC+CGG | 0.502784 | 7_3:-47348699 | Msa1106780:CDS |
| GCAGCATGTGTCTTGACTGA+GGG | 0.510463 | 7_3:+47347634 | None:intergenic |
| AGCACTTTCTCTTGCCCTAA+GGG | 0.511703 | 7_3:+47346737 | None:intergenic |
| CCTTCTTTGGTTGAAGCTAG+TGG | 0.513297 | 7_3:-47347389 | Msa1106780:CDS |
| CTAGTGGTTATAACCCGAAA+AGG | 0.518651 | 7_3:-47347373 | Msa1106780:CDS |
| AGTTGAAGAAAGTGCCCTTA+GGG | 0.524489 | 7_3:-47346751 | Msa1106780:CDS |
| TGCTCATCGGATGTTCCAGC+TGG | 0.528399 | 7_3:-47346371 | Msa1106780:CDS |
| AAAAGGCATCCAATAGAGGC+CGG | 0.528852 | 7_3:-47347597 | Msa1106780:CDS |
| CAACTTTCATGGTATCCAGC+TGG | 0.530057 | 7_3:+47346356 | None:intergenic |
| TTGTAGGGACTTGAAATGTA+TGG | 0.531054 | 7_3:-47348172 | Msa1106780:intron |
| ATCTTCAGATACACAGTTGG+AGG | 0.533593 | 7_3:+47346448 | None:intergenic |
| AGGAGCGGGTGAAGCGAAAA+GGG | 0.534590 | 7_3:-47348749 | Msa1106780:CDS |
| TCAGTCAAGACACATGCTGC+AGG | 0.536875 | 7_3:-47347631 | Msa1106780:CDS |
| ATCACCCTGCCCTTTCCCCA+TGG | 0.538821 | 7_3:+47347903 | None:intergenic |
| CAGAGAAGAACTTCTTGCCA+TGG | 0.541694 | 7_3:-47347920 | Msa1106780:CDS |
| AGAAGGGTCGTCGTTTCTTG+AGG | 0.547054 | 7_3:+47347406 | None:intergenic |
| GGCAAGAGAAAGTGCTTATG+TGG | 0.547957 | 7_3:-47346730 | Msa1106780:CDS |
| CAAAAGCAATCATGCTTACA+GGG | 0.548051 | 7_3:-47348602 | Msa1106780:CDS |
| AGAGAAGAACTTCTTGCCAT+GGG | 0.548697 | 7_3:-47347919 | Msa1106780:CDS |
| CTTGCCATGGGGAAAGGGCA+GGG | 0.550128 | 7_3:-47347907 | Msa1106780:CDS |
| TGGTTATAACCCGAAAAGGC+AGG | 0.554434 | 7_3:-47347369 | Msa1106780:CDS |
| TGCATCTTCAGATACACAGT+TGG | 0.554518 | 7_3:+47346445 | None:intergenic |
| AGCAGAGTCCGCAGACATCA+AGG | 0.554768 | 7_3:+47346680 | None:intergenic |
| GGAAGAAATTCATACTTGAA+AGG | 0.555899 | 7_3:-47347078 | Msa1106780:CDS |
| CTTCAAAATCTGATGCTCAT+CGG | 0.557888 | 7_3:-47346384 | Msa1106780:CDS |
| GTCAATGAAATGGATGCTGC+AGG | 0.559695 | 7_3:-47346621 | Msa1106780:CDS |
| TGCAGCATGTGTCTTGACTG+AGG | 0.563434 | 7_3:+47347633 | None:intergenic |
| AAGGCATCCAATAGAGGCCG+GGG | 0.566680 | 7_3:-47347595 | Msa1106780:CDS |
| AATGTATGTGCTGCGAGTTA+GGG | 0.575178 | 7_3:-47346474 | Msa1106780:CDS |
| TTCCAGTCGGGGCAAATGAG+AGG | 0.577347 | 7_3:+47348337 | None:intergenic |
| ATATGCAAATCCATTTGAGA+AGG | 0.591672 | 7_3:-47347047 | Msa1106780:CDS |
| TGTGAGTTAGGTCAAGGAGC+GGG | 0.592638 | 7_3:-47348763 | Msa1106780:intron |
| TATGATATGCTCATTAAGAA+GGG | 0.593230 | 7_3:-47346325 | Msa1106780:CDS |
| TGAGAAGGATTTAACACCAG+AGG | 0.597905 | 7_3:-47347032 | Msa1106780:CDS |
| CTGCTGATCCCAGACCTGCA+GGG | 0.599308 | 7_3:-47346662 | Msa1106780:CDS |
| CATTTGCCCCGACTGGAACG+CGG | 0.599728 | 7_3:-47348332 | Msa1106780:CDS |
| CAATCATGCTTACAGGGTCA+TGG | 0.600463 | 7_3:-47348596 | Msa1106780:intron |
| TCCAGTCGGGGCAAATGAGA+GGG | 0.601693 | 7_3:+47348338 | None:intergenic |
| CACTAGCTTCAACCAAAGAA+GGG | 0.601892 | 7_3:+47347390 | None:intergenic |
| GAAGAAGTTGCTGAGCATGT+TGG | 0.602780 | 7_3:-47348136 | Msa1106780:CDS |
| GTCAAGACACATGCTGCAGG+TGG | 0.607552 | 7_3:-47347628 | Msa1106780:CDS |
| TATGTGGTCCCGAACAATCG+CGG | 0.611263 | 7_3:-47346714 | Msa1106780:CDS |
| AAGCATCTCATACCGGAAGA+GGG | 0.618355 | 7_3:+47348050 | None:intergenic |
| CAACACATAAGTCAAAATCT+GGG | 0.618792 | 7_3:+47348659 | None:intergenic |
| CATACCGGAAGAGGGAAGCA+TGG | 0.621701 | 7_3:+47348058 | None:intergenic |
| GGGCAGGGTGATGACAAGAA+AGG | 0.622437 | 7_3:-47347892 | Msa1106780:intron |
| TCCAAATGCCTTGATGTCTG+CGG | 0.623348 | 7_3:-47346688 | Msa1106780:CDS |
| TAAGTCAAAATCTGGGCACA+CGG | 0.634031 | 7_3:+47348666 | None:intergenic |
| TGTGTATCTGAAGATGCAAG+AGG | 0.661370 | 7_3:-47346440 | Msa1106780:CDS |
| GGCTTGATGAAAGAGAGCGC+AGG | 0.663647 | 7_3:-47347099 | Msa1106780:CDS |
| GACTCCTTAAGAAATTCTGG+AGG | 0.664705 | 7_3:-47347443 | Msa1106780:CDS |
| AATGTATGGCATGAATAACT+GGG | 0.679265 | 7_3:-47348158 | Msa1106780:CDS |
| TTGTGAGTTAGGTCAAGGAG+CGG | 0.679425 | 7_3:-47348764 | Msa1106780:intron |
| TGTTGGAACAAAGAACAAAG+AGG | 0.696475 | 7_3:-47348119 | Msa1106780:CDS |
| GGATACCATGAAAGTTGACA+TGG | 0.698778 | 7_3:-47346350 | Msa1106780:CDS |
| TGTGGTCCCGAACAATCGCG+GGG | 0.699968 | 7_3:-47346712 | Msa1106780:CDS |
| GAGAAGAACTTCTTGCCATG+GGG | 0.705178 | 7_3:-47347918 | Msa1106780:CDS |
| GTTTAACGACTCTGACACTG+CGG | 0.772673 | 7_3:-47347294 | Msa1106780:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAATTAAATTTCATTC+AGG | + | chr7_3:47346718-47346737 | None:intergenic | 10.0% |
| !!! | TTTATGTAACTAATTTTAAT+TGG | - | chr7_3:47346941-47346960 | Msa1106780:CDS | 10.0% |
| !! | TTCATTAAAATAAATGAATT+GGG | + | chr7_3:47347174-47347193 | None:intergenic | 10.0% |
| !! | TTTCATTAAAATAAATGAAT+TGG | + | chr7_3:47347175-47347194 | None:intergenic | 10.0% |
| !!! | TTATTTTAATGAAAATCATT+TGG | - | chr7_3:47347181-47347200 | Msa1106780:intron | 10.0% |
| !!! | AATATCTTTTTATTGTAATT+AGG | - | chr7_3:47347673-47347692 | Msa1106780:intron | 10.0% |
| !! | ATTTATTCATTTATGATTAA+TGG | - | chr7_3:47348261-47348280 | Msa1106780:intron | 10.0% |
| !! | ATATGATAAATCATTATATT+TGG | - | chr7_3:47348827-47348846 | Msa1106780:intron | 10.0% |
| !! | ACATCAAAAGAAAAAAAAAA+TGG | + | chr7_3:47346435-47346454 | None:intergenic | 15.0% |
| !!! | ATATTATTTGTTGTTGTTTT+TGG | - | chr7_3:47346477-47346496 | Msa1106780:CDS | 15.0% |
| !!! | TATTATTTGTTGTTGTTTTT+GGG | - | chr7_3:47346478-47346497 | Msa1106780:CDS | 15.0% |
| !!! | AAAATACCTTTTTTTTTAAG+AGG | + | chr7_3:47347045-47347064 | None:intergenic | 15.0% |
| !! | AAAATAAAATGTAGTGTTTA+TGG | + | chr7_3:47347093-47347112 | None:intergenic | 15.0% |
| !! | ACATAGTAAATTAAAAAATG+TGG | + | chr7_3:47347876-47347895 | None:intergenic | 15.0% |
| !! | TAAATAGACAATTGAATTTA+GGG | + | chr7_3:47348242-47348261 | None:intergenic | 15.0% |
| !! | ATAAATAGACAATTGAATTT+AGG | + | chr7_3:47348243-47348262 | None:intergenic | 15.0% |
| !!! | AATATTTGAACATAATTTTC+TGG | - | chr7_3:47348286-47348305 | Msa1106780:intron | 15.0% |
| !!! | ATATTTGAACATAATTTTCT+GGG | - | chr7_3:47348287-47348306 | Msa1106780:intron | 15.0% |
| !!! | TCTATATCAGTTTTTTAATA+TGG | - | chr7_3:47348689-47348708 | Msa1106780:CDS | 15.0% |
| !!! | TTTTCTACCAATAATTTTTT+TGG | - | chr7_3:47348883-47348902 | Msa1106780:intron | 15.0% |
| !! | ATCTATCGTTTATATATTAT+AGG | - | chr7_3:47349408-47349427 | Msa1106780:intron | 15.0% |
| !! | TGATACATATCTATAATAAA+AGG | - | chr7_3:47349831-47349850 | Msa1106780:intron | 15.0% |
| !! | TTTGAATTGAAAAATATTGA+AGG | - | chr7_3:47349958-47349977 | Msa1106780:intron | 15.0% |
| !! | AACAACAAATAATATAACAG+GGG | + | chr7_3:47346472-47346491 | None:intergenic | 20.0% |
| !! | CAACAACAAATAATATAACA+GGG | + | chr7_3:47346473-47346492 | None:intergenic | 20.0% |
| !! | ACAACAACAAATAATATAAC+AGG | + | chr7_3:47346474-47346493 | None:intergenic | 20.0% |
| !!! | GAGTTTTATTATGTTTCAAA+AGG | + | chr7_3:47346572-47346591 | None:intergenic | 20.0% |
| !! | TAATTTAAATGTGTAGTCAT+AGG | - | chr7_3:47346728-47346747 | Msa1106780:CDS | 20.0% |
| !! | CACATAAGTAAATTTACAAA+TGG | - | chr7_3:47346879-47346898 | Msa1106780:intron | 20.0% |
| !!! | TTACATAAACAATTTTGTGT+AGG | + | chr7_3:47346930-47346949 | None:intergenic | 20.0% |
| !!! | ACTAATTTTAATTGGATGAT+AGG | - | chr7_3:47346949-47346968 | Msa1106780:CDS | 20.0% |
| !!! | AATTACTCACAATTTTTCAA+AGG | - | chr7_3:47346974-47346993 | Msa1106780:CDS | 20.0% |
| !!! | TCATATTGGTCAATTTTTAT+AGG | + | chr7_3:47347003-47347022 | None:intergenic | 20.0% |
| !! | CAAAATACTTACATTCATAT+TGG | + | chr7_3:47347017-47347036 | None:intergenic | 20.0% |
| !! | TAAAATAAATGAATTGGGAT+TGG | + | chr7_3:47347169-47347188 | None:intergenic | 20.0% |
| !! | ACCAAAAACCAAATTAATTT+AGG | - | chr7_3:47347354-47347373 | Msa1106780:CDS | 20.0% |
| !!! | ACCTAAATTAATTTGGTTTT+TGG | + | chr7_3:47347358-47347377 | None:intergenic | 20.0% |
| !!! | ACAAGATACATTTTTCAATT+TGG | - | chr7_3:47347407-47347426 | Msa1106780:CDS | 20.0% |
| !!! | ATACATTTTTCAATTTGGTT+AGG | - | chr7_3:47347412-47347431 | Msa1106780:CDS | 20.0% |
| !!! | TTTATTTTATAGTGATTCTG+TGG | + | chr7_3:47347522-47347541 | None:intergenic | 20.0% |
| !!! | GTTAATTTTATTTACTGTGT+AGG | - | chr7_3:47347735-47347754 | Msa1106780:intron | 20.0% |
| !!! | TATTTGAACATAATTTTCTG+GGG | - | chr7_3:47348288-47348307 | Msa1106780:intron | 20.0% |
| !!! | CAATAATTTTTTTGGTTGTA+GGG | - | chr7_3:47348891-47348910 | Msa1106780:intron | 20.0% |
| !! | AAGAAAATGATAATTCACAT+TGG | + | chr7_3:47349383-47349402 | None:intergenic | 20.0% |
| !! | TCGTTTATATATTATAGGAT+CGG | - | chr7_3:47349413-47349432 | Msa1106780:intron | 20.0% |
| !!! | AAAGGTGTGAATTTTATATT+TGG | - | chr7_3:47349507-47349526 | Msa1106780:intron | 20.0% |
| !! | AATATTGTGTAATGTCAATT+GGG | + | chr7_3:47349541-47349560 | None:intergenic | 20.0% |
| !!! | ATTTTTTATGAATTTGAGTG+TGG | + | chr7_3:47349900-47349919 | None:intergenic | 20.0% |
| ! | ACTAGAGAGTAAATGATATT+AGG | - | chr7_3:47346630-47346649 | Msa1106780:CDS | 25.0% |
| !! | CTTATGTGACTAATTTTCAT+GGG | + | chr7_3:47346867-47346886 | None:intergenic | 25.0% |
| !! | ACTTATGTGACTAATTTTCA+TGG | + | chr7_3:47346868-47346887 | None:intergenic | 25.0% |
| !!! | ACCTTTTTTTTTAAGAGGAA+TGG | + | chr7_3:47347040-47347059 | None:intergenic | 25.0% |
| !! | GGTATTTTTCCATTCATTAT+TGG | - | chr7_3:47347057-47347076 | Msa1106780:CDS | 25.0% |
| ! | AAAGAATAGCCAATAATGAA+TGG | + | chr7_3:47347069-47347088 | None:intergenic | 25.0% |
| !!! | GATATTTTTGACATTAGCAT+CGG | - | chr7_3:47347295-47347314 | Msa1106780:CDS | 25.0% |
| ! | TGAACTCACCTAAATTAATT+TGG | + | chr7_3:47347365-47347384 | None:intergenic | 25.0% |
| ! | AAAATGTATCTTGTCTGATT+CGG | + | chr7_3:47347401-47347420 | None:intergenic | 25.0% |
| ! | ATAGAGCATGATAATTGAAA+AGG | + | chr7_3:47347819-47347838 | None:intergenic | 25.0% |
| !!! | TTTTTAAACTTTGACTTGGA+TGG | + | chr7_3:47347959-47347978 | None:intergenic | 25.0% |
| !!! | TTGGTTTTTAAACTTTGACT+TGG | + | chr7_3:47347963-47347982 | None:intergenic | 25.0% |
| ! | GAAACTAAAGAATGAAAATG+TGG | + | chr7_3:47347996-47348015 | None:intergenic | 25.0% |
| !! | ATACACAATAAGTTTTCGTT+TGG | + | chr7_3:47348178-47348197 | None:intergenic | 25.0% |
| ! | GAAAACTTATTGTGTATGTT+TGG | - | chr7_3:47348181-47348200 | Msa1106780:intron | 25.0% |
| !! | AATTGAATTTAGGGTTGTTA+GGG | + | chr7_3:47348233-47348252 | None:intergenic | 25.0% |
| ! | TACTGTAATATCGATATTAC+AGG | - | chr7_3:47348369-47348388 | Msa1106780:intron | 25.0% |
| ! | AGGAAAACATTTGAAAGTAA+TGG | + | chr7_3:47348515-47348534 | None:intergenic | 25.0% |
| ! | TAAGTTTAACAAGACATCAA+AGG | + | chr7_3:47348535-47348554 | None:intergenic | 25.0% |
| !!! | TAACATTTTGATCGATAGAA+AGG | - | chr7_3:47348553-47348572 | Msa1106780:intron | 25.0% |
| !! | TGGTAATGCAATTATATCAA+CGG | + | chr7_3:47348626-47348645 | None:intergenic | 25.0% |
| ! | CCTACAACCAAAAAAATTAT+TGG | + | chr7_3:47348893-47348912 | None:intergenic | 25.0% |
| !!! | CCAATAATTTTTTTGGTTGT+AGG | - | chr7_3:47348890-47348909 | Msa1106780:intron | 25.0% |
| ! | TCATTCTTTCAGATAGATTT+AGG | - | chr7_3:47349326-47349345 | Msa1106780:intron | 25.0% |
| ! | CATTCTTTCAGATAGATTTA+GGG | - | chr7_3:47349327-47349346 | Msa1106780:intron | 25.0% |
| ! | CAATATTGTGTAATGTCAAT+TGG | + | chr7_3:47349542-47349561 | None:intergenic | 25.0% |
| !!! | TACACAATATTGATTCTTTG+AGG | - | chr7_3:47349550-47349569 | Msa1106780:intron | 25.0% |
| !!! | AACAACCATTTTAGTTTTGT+TGG | - | chr7_3:47349856-47349875 | Msa1106780:intron | 25.0% |
| ! | AGAAACCAACAAAACTAAAA+TGG | + | chr7_3:47349864-47349883 | None:intergenic | 25.0% |
| !! | TTCAAGTTATGTCAATGAAA+TGG | - | chr7_3:47350447-47350466 | Msa1106780:intron | 25.0% |
| ! | TATGATATGCTCATTAAGAA+GGG | - | chr7_3:47350753-47350772 | Msa1106780:CDS | 25.0% |
| ! | GTGAAGTAAAAGTTAGTTTG+TGG | + | chr7_3:47346908-47346927 | None:intergenic | 30.0% |
| GCCATTCCTCTTAAAAAAAA+AGG | - | chr7_3:47347036-47347055 | Msa1106780:CDS | 30.0% | |
| TGAAAATAAGGAAGTTGACT+CGG | + | chr7_3:47347145-47347164 | None:intergenic | 30.0% | |
| ATTGGGATTGGATGAAAATA+AGG | + | chr7_3:47347157-47347176 | None:intergenic | 30.0% | |
| CCATACAACTTAATGAGAAT+TGG | + | chr7_3:47347212-47347231 | None:intergenic | 30.0% | |
| ! | CCAATTCTCATTAAGTTGTA+TGG | - | chr7_3:47347209-47347228 | Msa1106780:intron | 30.0% |
| ! | TTTGAGACCAAAATAACTGA+TGG | + | chr7_3:47347327-47347346 | None:intergenic | 30.0% |
| TAATTTAGGTGAGTTCAGTT+TGG | - | chr7_3:47347368-47347387 | Msa1106780:CDS | 30.0% | |
| ATAAGTTTGACAAAGGAACA+AGG | + | chr7_3:47347499-47347518 | None:intergenic | 30.0% | |
| ! | CCTATGTTTCTATGATTACT+CGG | + | chr7_3:47347577-47347596 | None:intergenic | 30.0% |
| CGAGTAATCATAGAAACATA+GGG | - | chr7_3:47347575-47347594 | Msa1106780:intron | 30.0% | |
| ! | AAATCAAACCTTTTGCATGA+TGG | + | chr7_3:47347634-47347653 | None:intergenic | 30.0% |
| ! | ATGCAACTATATGTTTTACG+TGG | - | chr7_3:47347713-47347732 | Msa1106780:intron | 30.0% |
| TTTATTTACTGTGTAGGTCA+AGG | - | chr7_3:47347741-47347760 | Msa1106780:intron | 30.0% | |
| AAAATGTGGCTATATGCAAT+TGG | + | chr7_3:47347982-47348001 | None:intergenic | 30.0% | |
| ! | CAATTGAATTTAGGGTTGTT+AGG | + | chr7_3:47348234-47348253 | None:intergenic | 30.0% |
| CAACACATAAGTCAAAATCT+GGG | + | chr7_3:47348422-47348441 | None:intergenic | 30.0% | |
| TCAACACATAAGTCAAAATC+TGG | + | chr7_3:47348423-47348442 | None:intergenic | 30.0% | |
| TGATATAATTGCATTACCAC+TGG | - | chr7_3:47348627-47348646 | Msa1106780:CDS | 30.0% | |
| GACAAATTATCCTGTCAATA+GGG | + | chr7_3:47348717-47348736 | None:intergenic | 30.0% | |
| AGACAAATTATCCTGTCAAT+AGG | + | chr7_3:47348718-47348737 | None:intergenic | 30.0% | |
| ! | TGAAGAAATTTTGCTTCTAG+AGG | - | chr7_3:47348770-47348789 | Msa1106780:intron | 30.0% |
| AAATGTATGGCATGAATAAC+TGG | - | chr7_3:47348919-47348938 | Msa1106780:intron | 30.0% | |
| AATGTATGGCATGAATAACT+GGG | - | chr7_3:47348920-47348939 | Msa1106780:intron | 30.0% | |
| ! | GCTAATCGTTCTTATTTACT+AGG | - | chr7_3:47349110-47349129 | Msa1106780:intron | 30.0% |
| TATATTATAGGATCGGATTC+TGG | - | chr7_3:47349420-47349439 | Msa1106780:intron | 30.0% | |
| ATATTATAGGATCGGATTCT+GGG | - | chr7_3:47349421-47349440 | Msa1106780:intron | 30.0% | |
| TGTAATGTCAATTGGGATTT+AGG | + | chr7_3:47349534-47349553 | None:intergenic | 30.0% | |
| TGTCAATGACAAAAGAACTA+TGG | + | chr7_3:47349615-47349634 | None:intergenic | 30.0% | |
| ATTTCCTCCAGAATTTCTTA+AGG | + | chr7_3:47349642-47349661 | None:intergenic | 30.0% | |
| ! | ATATCAAATTCCTGCCTTTT+CGG | + | chr7_3:47349722-47349741 | None:intergenic | 30.0% |
| GGAAGAAATTCATACTTGAA+AGG | - | chr7_3:47350000-47350019 | Msa1106780:intron | 30.0% | |
| ATATGCAAATCCATTTGAGA+AGG | - | chr7_3:47350031-47350050 | Msa1106780:intron | 30.0% | |
| GAAAAGAATTCAAGAGCTTA+AGG | - | chr7_3:47350169-47350188 | Msa1106780:intron | 30.0% | |
| TGGATGACATTCAATTGTTA+TGG | - | chr7_3:47350201-47350220 | Msa1106780:intron | 30.0% | |
| !!! | TTTTTGTTTTCTGAAACCGT+CGG | - | chr7_3:47350560-47350579 | Msa1106780:intron | 30.0% |
| GTATGATATGCTCATTAAGA+AGG | - | chr7_3:47350752-47350771 | Msa1106780:CDS | 30.0% | |
| !!! | TCGATCGATGCTTTTTTCTT+AGG | + | chr7_3:47346324-47346343 | None:intergenic | 35.0% |
| !! | TAAGAAAAAAGCATCGATCG+AGG | - | chr7_3:47346323-47346342 | Msa1106780:CDS | 35.0% |
| ! | ATATTAGGCCTTGTAAGCAA+AGG | - | chr7_3:47346645-47346664 | Msa1106780:CDS | 35.0% |
| TGAACAATCCTTTGCTTACA+AGG | + | chr7_3:47346656-47346675 | None:intergenic | 35.0% | |
| AAATGTGTAGTCATAGGTGT+TGG | - | chr7_3:47346734-47346753 | Msa1106780:CDS | 35.0% | |
| !!! | TTTTTGACATTAGCATCGGT+CGG | - | chr7_3:47347299-47347318 | Msa1106780:CDS | 35.0% |
| TCTGTGGATAAGTTTGACAA+AGG | + | chr7_3:47347506-47347525 | None:intergenic | 35.0% | |
| CCGAGTAATCATAGAAACAT+AGG | - | chr7_3:47347574-47347593 | Msa1106780:intron | 35.0% | |
| ATGATGATCCATCATGCAAA+AGG | - | chr7_3:47347623-47347642 | Msa1106780:CDS | 35.0% | |
| AAAAAGAAGAATGCTGCAAG+TGG | - | chr7_3:47347764-47347783 | Msa1106780:intron | 35.0% | |
| TGGATGGAAATGAACAAGTT+TGG | + | chr7_3:47347943-47347962 | None:intergenic | 35.0% | |
| CACTTTGACAATTTGTAGCT+TGG | - | chr7_3:47348096-47348115 | Msa1106780:CDS | 35.0% | |
| TAGCTTGGAAATTATCGTCA+TGG | - | chr7_3:47348111-47348130 | Msa1106780:CDS | 35.0% | |
| TATCGTCATGGAATGAGTAT+CGG | - | chr7_3:47348123-47348142 | Msa1106780:CDS | 35.0% | |
| TCGATATTACAGGACAAATC+CGG | - | chr7_3:47348379-47348398 | Msa1106780:intron | 35.0% | |
| !! | TAAGCATGATTGCTTTTGTG+GGG | + | chr7_3:47348474-47348493 | None:intergenic | 35.0% |
| !! | GTAAGCATGATTGCTTTTGT+GGG | + | chr7_3:47348475-47348494 | None:intergenic | 35.0% |
| !! | TGTAAGCATGATTGCTTTTG+TGG | + | chr7_3:47348476-47348495 | None:intergenic | 35.0% |
| ACAAAAGCAATCATGCTTAC+AGG | - | chr7_3:47348475-47348494 | Msa1106780:intron | 35.0% | |
| CAAAAGCAATCATGCTTACA+GGG | - | chr7_3:47348476-47348495 | Msa1106780:intron | 35.0% | |
| AGATTCACAAGCATTTATGC+AGG | + | chr7_3:47348594-47348613 | None:intergenic | 35.0% | |
| CAATTATATCAACGGCGATT+TGG | + | chr7_3:47348618-47348637 | None:intergenic | 35.0% | |
| !! | AATTGCATTACCACTGGTTT+CGG | - | chr7_3:47348633-47348652 | Msa1106780:CDS | 35.0% |
| TAATATGGTTCCCTATTGAC+AGG | - | chr7_3:47348704-47348723 | Msa1106780:CDS | 35.0% | |
| !!! | ATTTTGCTTCTAGAGGTACT+TGG | - | chr7_3:47348777-47348796 | Msa1106780:intron | 35.0% |
| ! | TTTAAAGTCGATGCGACTAA+TGG | - | chr7_3:47348800-47348819 | Msa1106780:intron | 35.0% |
| TTGTAGGGACTTGAAATGTA+TGG | - | chr7_3:47348906-47348925 | Msa1106780:intron | 35.0% | |
| TGTTGGAACAAAGAACAAAG+AGG | - | chr7_3:47348959-47348978 | Msa1106780:intron | 35.0% | |
| ACACTATAGGATTGTGTACT+TGG | - | chr7_3:47348992-47349011 | Msa1106780:intron | 35.0% | |
| ! | TCATTTGAAGCATCTCATAC+CGG | + | chr7_3:47349038-47349057 | None:intergenic | 35.0% |
| TAGGATATGTCTCATGTTGT+TGG | - | chr7_3:47349129-47349148 | Msa1106780:intron | 35.0% | |
| !! | AACAAAAAGGCATCCAATAG+AGG | - | chr7_3:47349477-47349496 | Msa1106780:intron | 35.0% |
| ! | TAAAATTCACACCTTTTCCC+CGG | + | chr7_3:47349503-47349522 | None:intergenic | 35.0% |
| ACAGACTCCTTAAGAAATTC+TGG | - | chr7_3:47349632-47349651 | Msa1106780:intron | 35.0% | |
| ! | TATCAAATTCCTGCCTTTTC+GGG | + | chr7_3:47349721-47349740 | None:intergenic | 35.0% |
| GGTGTTAAATCCTTCTCAAA+TGG | + | chr7_3:47350044-47350063 | None:intergenic | 35.0% | |
| AGTTCTGTGTTCAGAGATAA+TGG | + | chr7_3:47350147-47350166 | None:intergenic | 35.0% | |
| AGAGCTTAAGGTTTGATTCA+TGG | - | chr7_3:47350181-47350200 | Msa1106780:intron | 35.0% | |
| !!! | CATTCACTTTTTTCACTGCA+TGG | - | chr7_3:47350225-47350244 | Msa1106780:intron | 35.0% |
| ! | CATTTGTTAAACATGATCGC+AGG | - | chr7_3:47350270-47350289 | Msa1106780:intron | 35.0% |
| CTTCAAAATCTGATGCTCAT+CGG | - | chr7_3:47350694-47350713 | Msa1106780:intron | 35.0% | |
| ATACACCATGTCAACTTTCA+TGG | + | chr7_3:47350736-47350755 | None:intergenic | 35.0% | |
| ATGCTCATTAAGAAGGGATT+TGG | - | chr7_3:47350759-47350778 | Msa1106780:CDS | 35.0% | |
| ! | GAGGCTACTTTGAATGATTG+CGG | - | chr7_3:47346825-47346844 | Msa1106780:intron | 40.0% |
| ! | AGGCTACTTTGAATGATTGC+GGG | - | chr7_3:47346826-47346845 | Msa1106780:intron | 40.0% |
| !!! | TTTTGACATTAGCATCGGTC+GGG | - | chr7_3:47347300-47347319 | Msa1106780:CDS | 40.0% |
| TTTGAGTGTGCAATACGTAC+GGG | + | chr7_3:47347461-47347480 | None:intergenic | 40.0% | |
| GTTTGAGTGTGCAATACGTA+CGG | + | chr7_3:47347462-47347481 | None:intergenic | 40.0% | |
| AGTGGAGATAACTCAGAATC+TGG | - | chr7_3:47347782-47347801 | Msa1106780:intron | 40.0% | |
| AGTGTTTCTCGATCTTCGTA+AGG | - | chr7_3:47348021-47348040 | Msa1106780:intron | 40.0% | |
| AAGTGAATGAATGCACGCAT+TGG | + | chr7_3:47348081-47348100 | None:intergenic | 40.0% | |
| ATCGTCATGGAATGAGTATC+GGG | - | chr7_3:47348124-47348143 | Msa1106780:CDS | 40.0% | |
| !! | TTCTGGGGATTTTGTGAGTT+AGG | - | chr7_3:47348303-47348322 | Msa1106780:intron | 40.0% |
| ! | GGATTTTGTGAGTTAGGTCA+AGG | - | chr7_3:47348309-47348328 | Msa1106780:CDS | 40.0% |
| TAAGTCAAAATCTGGGCACA+CGG | + | chr7_3:47348415-47348434 | None:intergenic | 40.0% | |
| ! | TGTGTTGAGTGCTTTTCTGT+TGG | - | chr7_3:47348435-47348454 | Msa1106780:intron | 40.0% |
| AGAGAAGAACTTCTTGCCAT+GGG | - | chr7_3:47349159-47349178 | Msa1106780:intron | 40.0% | |
| TGCAGGTGGAACTAACAAAA+AGG | - | chr7_3:47349464-47349483 | Msa1106780:intron | 40.0% | |
| GACTCCTTAAGAAATTCTGG+AGG | - | chr7_3:47349635-47349654 | Msa1106780:intron | 40.0% | |
| ! | TCGTCGTTTCTTGAGGATTT+TGG | + | chr7_3:47349668-47349687 | None:intergenic | 40.0% |
| ! | CACTAGCTTCAACCAAAGAA+GGG | + | chr7_3:47349691-47349710 | None:intergenic | 40.0% |
| CTAGTGGTTATAACCCGAAA+AGG | - | chr7_3:47349705-47349724 | Msa1106780:intron | 40.0% | |
| TGAGCAATTACTCGCTGATA+TGG | - | chr7_3:47349760-47349779 | Msa1106780:intron | 40.0% | |
| TGAGAAGGATTTAACACCAG+AGG | - | chr7_3:47350046-47350065 | Msa1106780:intron | 40.0% | |
| GGATTTAACACCAGAGGAAA+AGG | - | chr7_3:47350052-47350071 | Msa1106780:intron | 40.0% | |
| GTTCATGCGCTTTCATACTA+AGG | - | chr7_3:47350097-47350116 | Msa1106780:intron | 40.0% | |
| !! | AAGTTGAAGAAAGTGCCCTT+AGG | - | chr7_3:47350326-47350345 | Msa1106780:intron | 40.0% |
| !! | AGTTGAAGAAAGTGCCCTTA+GGG | - | chr7_3:47350327-47350346 | Msa1106780:intron | 40.0% |
| AAATGTATGTGCTGCGAGTT+AGG | - | chr7_3:47350603-47350622 | Msa1106780:intron | 40.0% | |
| AATGTATGTGCTGCGAGTTA+GGG | - | chr7_3:47350604-47350623 | Msa1106780:intron | 40.0% | |
| ATCTTCAGATACACAGTTGG+AGG | + | chr7_3:47350633-47350652 | None:intergenic | 40.0% | |
| TGCATCTTCAGATACACAGT+TGG | + | chr7_3:47350636-47350655 | None:intergenic | 40.0% | |
| TGTGTATCTGAAGATGCAAG+AGG | - | chr7_3:47350638-47350657 | Msa1106780:intron | 40.0% | |
| CTGTCAGTACAAATGATTGC+TGG | - | chr7_3:47350663-47350682 | Msa1106780:intron | 40.0% | |
| GGATACCATGAAAGTTGACA+TGG | - | chr7_3:47350728-47350747 | Msa1106780:intron | 40.0% | |
| ! | GTCGGGTCCATCAGTTATTT+TGG | - | chr7_3:47347317-47347336 | Msa1106780:CDS | 45.0% |
| TTGTGAGTTAGGTCAAGGAG+CGG | - | chr7_3:47348314-47348333 | Msa1106780:CDS | 45.0% | |
| CAATCATGCTTACAGGGTCA+TGG | - | chr7_3:47348482-47348501 | Msa1106780:intron | 45.0% | |
| AACAATGTTGCCGAAACCAG+TGG | + | chr7_3:47348646-47348665 | None:intergenic | 45.0% | |
| AAAGTCGATGCGACTAATGG+TGG | - | chr7_3:47348803-47348822 | Msa1106780:intron | 45.0% | |
| GAAGAAGTTGCTGAGCATGT+TGG | - | chr7_3:47348942-47348961 | Msa1106780:intron | 45.0% | |
| AGGCATGCACTGAACACTAT+AGG | - | chr7_3:47348979-47348998 | Msa1106780:intron | 45.0% | |
| AAGCATCTCATACCGGAAGA+GGG | + | chr7_3:47349031-47349050 | None:intergenic | 45.0% | |
| CAGAGAAGAACTTCTTGCCA+TGG | - | chr7_3:47349158-47349177 | Msa1106780:intron | 45.0% | |
| GAGAAGAACTTCTTGCCATG+GGG | - | chr7_3:47349160-47349179 | Msa1106780:intron | 45.0% | |
| AACTTCTTGCCATGGGGAAA+GGG | - | chr7_3:47349166-47349185 | Msa1106780:intron | 45.0% | |
| !! | AAAAGGCATCCAATAGAGGC+CGG | - | chr7_3:47349481-47349500 | Msa1106780:intron | 45.0% |
| AAGAAACGACGACCCTTCTT+TGG | - | chr7_3:47349676-47349695 | Msa1106780:intron | 45.0% | |
| ! | CCACTAGCTTCAACCAAAGA+AGG | + | chr7_3:47349692-47349711 | None:intergenic | 45.0% |
| CCTTCTTTGGTTGAAGCTAG+TGG | - | chr7_3:47349689-47349708 | Msa1106780:intron | 45.0% | |
| TGGTTATAACCCGAAAAGGC+AGG | - | chr7_3:47349709-47349728 | Msa1106780:intron | 45.0% | |
| GTTTAACGACTCTGACACTG+CGG | - | chr7_3:47349784-47349803 | Msa1106780:intron | 45.0% | |
| ! | CGACATATTGCCTTTTCCTC+TGG | + | chr7_3:47350065-47350084 | None:intergenic | 45.0% |
| AGCACTTTCTCTTGCCCTAA+GGG | + | chr7_3:47350344-47350363 | None:intergenic | 45.0% | |
| AAGCACTTTCTCTTGCCCTA+AGG | + | chr7_3:47350345-47350364 | None:intergenic | 45.0% | |
| !! | GGCAAGAGAAAGTGCTTATG+TGG | - | chr7_3:47350348-47350367 | Msa1106780:intron | 45.0% |
| TCCAAATGCCTTGATGTCTG+CGG | - | chr7_3:47350390-47350409 | Msa1106780:intron | 45.0% | |
| GTCAATGAAATGGATGCTGC+AGG | - | chr7_3:47350457-47350476 | Msa1106780:intron | 45.0% | |
| TGACAGAACATTACAGCCGA+CGG | + | chr7_3:47350579-47350598 | None:intergenic | 45.0% | |
| CAACTTTCATGGTATCCAGC+TGG | + | chr7_3:47350725-47350744 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTTTTTTTTTTTG+AGG | - | chr7_3:47346806-47346825 | Msa1106780:intron | 5.0% |
| !!! | TTTAAATTTTTTTATTTTGT+TGG | - | chr7_3:47347435-47347454 | Msa1106780:CDS | 5.0% |
| !!! | TTTTACAAAATAATAAATAA+AGG | + | chr7_3:47347547-47347566 | None:intergenic | 5.0% |
| ! | AACTCAGAATCTGGAGCTGC+AGG | - | chr7_3:47347791-47347810 | Msa1106780:intron | 50.0% |
| GTTTGGATCGAAGCGTGCTT+TGG | - | chr7_3:47348198-47348217 | Msa1106780:intron | 50.0% | |
| TGTGAGTTAGGTCAAGGAGC+GGG | - | chr7_3:47348315-47348334 | Msa1106780:CDS | 50.0% | |
| TTCTTCATCCGCGTTCCAGT+CGG | + | chr7_3:47348757-47348776 | None:intergenic | 50.0% | |
| ! | GAAGCATCTCATACCGGAAG+AGG | + | chr7_3:47349032-47349051 | None:intergenic | 50.0% |
| GAACTTCTTGCCATGGGGAA+AGG | - | chr7_3:47349165-47349184 | Msa1106780:intron | 50.0% | |
| GCAGCATGTGTCTTGACTGA+GGG | + | chr7_3:47349447-47349466 | None:intergenic | 50.0% | |
| TGCAGCATGTGTCTTGACTG+AGG | + | chr7_3:47349448-47349467 | None:intergenic | 50.0% | |
| TCAGTCAAGACACATGCTGC+AGG | - | chr7_3:47349447-47349466 | Msa1106780:intron | 50.0% | |
| !! | AAAGGCATCCAATAGAGGCC+GGG | - | chr7_3:47349482-47349501 | Msa1106780:intron | 50.0% |
| AGAAGGGTCGTCGTTTCTTG+AGG | + | chr7_3:47349675-47349694 | None:intergenic | 50.0% | |
| TATGTGGTCCCGAACAATCG+CGG | - | chr7_3:47350364-47350383 | Msa1106780:intron | 50.0% | |
| ! | TTTGGAACCCCGCGATTGTT+CGG | + | chr7_3:47350376-47350395 | None:intergenic | 50.0% |
| ! | TCCGCAGACATCAAGGCATT+TGG | + | chr7_3:47350394-47350413 | None:intergenic | 50.0% |
| GTCGGCTGTAATGTTCTGTC+AGG | - | chr7_3:47350578-47350597 | Msa1106780:intron | 50.0% | |
| AAGGAGCGGGTGAAGCGAAA+AGG | - | chr7_3:47348328-47348347 | Msa1106780:CDS | 55.0% | |
| AGGAGCGGGTGAAGCGAAAA+GGG | - | chr7_3:47348329-47348348 | Msa1106780:CDS | 55.0% | |
| GGCACACGGCACACTTAATC+CGG | + | chr7_3:47348401-47348420 | None:intergenic | 55.0% | |
| TCCAGTCGGGGCAAATGAGA+GGG | + | chr7_3:47348743-47348762 | None:intergenic | 55.0% | |
| TTCCAGTCGGGGCAAATGAG+AGG | + | chr7_3:47348744-47348763 | None:intergenic | 55.0% | |
| TCTTCATCCGCGTTCCAGTC+GGG | + | chr7_3:47348756-47348775 | None:intergenic | 55.0% | |
| CTCTCCATGCTTCCCTCTTC+CGG | - | chr7_3:47349016-47349035 | Msa1106780:intron | 55.0% | |
| CATACCGGAAGAGGGAAGCA+TGG | + | chr7_3:47349023-47349042 | None:intergenic | 55.0% | |
| GGGCAGGGTGATGACAAGAA+AGG | - | chr7_3:47349186-47349205 | Msa1106780:intron | 55.0% | |
| GTCAAGACACATGCTGCAGG+TGG | - | chr7_3:47349450-47349469 | Msa1106780:intron | 55.0% | |
| ! | AAGGCATCCAATAGAGGCCG+GGG | - | chr7_3:47349483-47349502 | Msa1106780:intron | 55.0% |
| TCCAATAGAGGCCGGGGAAA+AGG | - | chr7_3:47349489-47349508 | Msa1106780:intron | 55.0% | |
| ! | ACCTTTTCCCCGGCCTCTAT+TGG | + | chr7_3:47349493-47349512 | None:intergenic | 55.0% |
| ! | GGCTTGATGAAAGAGAGCGC+AGG | - | chr7_3:47349979-47349998 | Msa1106780:intron | 55.0% |
| ATGTGGTCCCGAACAATCGC+GGG | - | chr7_3:47350365-47350384 | Msa1106780:intron | 55.0% | |
| TTGGAACCCCGCGATTGTTC+GGG | + | chr7_3:47350375-47350394 | None:intergenic | 55.0% | |
| AGCAGAGTCCGCAGACATCA+AGG | + | chr7_3:47350401-47350420 | None:intergenic | 55.0% | |
| TGCTCATCGGATGTTCCAGC+TGG | - | chr7_3:47350707-47350726 | Msa1106780:intron | 55.0% | |
| ACCCTCTCATTTGCCCCGAC+TGG | - | chr7_3:47348739-47348758 | Msa1106780:CDS | 60.0% | |
| CATTTGCCCCGACTGGAACG+CGG | - | chr7_3:47348746-47348765 | Msa1106780:CDS | 60.0% | |
| CTTCATCCGCGTTCCAGTCG+GGG | + | chr7_3:47348755-47348774 | None:intergenic | 60.0% | |
| TCTTGCCATGGGGAAAGGGC+AGG | - | chr7_3:47349170-47349189 | Msa1106780:intron | 60.0% | |
| CTTGCCATGGGGAAAGGGCA+GGG | - | chr7_3:47349171-47349190 | Msa1106780:intron | 60.0% | |
| ATCACCCTGCCCTTTCCCCA+TGG | + | chr7_3:47349178-47349197 | None:intergenic | 60.0% | |
| TGTGGTCCCGAACAATCGCG+GGG | - | chr7_3:47350366-47350385 | Msa1106780:intron | 60.0% | |
| TCTGCTGATCCCAGACCTGC+AGG | - | chr7_3:47350415-47350434 | Msa1106780:intron | 60.0% | |
| CTGCTGATCCCAGACCTGCA+GGG | - | chr7_3:47350416-47350435 | Msa1106780:intron | 60.0% | |
| CTTGAAGTAGCTCGCCCTGC+AGG | + | chr7_3:47350433-47350452 | None:intergenic | 60.0% | |
| TCGCAGGAAGCTCGTGCTGC+TGG | - | chr7_3:47350286-47350305 | Msa1106780:intron | 65.0% | |
| GTAGCTCGCCCTGCAGGTCT+GGG | + | chr7_3:47350427-47350446 | None:intergenic | 65.0% | |
| AGTAGCTCGCCCTGCAGGTC+TGG | + | chr7_3:47350428-47350447 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 47346309 | 47350791 | 47346309 | ID=Msa1106780;Name=Msa1106780 |
| chr7_3 | mRNA | 47346309 | 47350791 | 47346309 | ID=Msa1106780-mRNA-1;Parent=Msa1106780;Name=Msa1106780-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0|0|0.81|1|1|11|0|487 |
| chr7_3 | exon | 47350742 | 47350791 | 47350742 | ID=Msa1106780-mRNA-1:exon:9672;Parent=Msa1106780-mRNA-1 |
| chr7_3 | exon | 47349288 | 47349343 | 47349288 | ID=Msa1106780-mRNA-1:exon:9671;Parent=Msa1106780-mRNA-1 |
| chr7_3 | exon | 47348597 | 47348775 | 47348597 | ID=Msa1106780-mRNA-1:exon:9670;Parent=Msa1106780-mRNA-1 |
| chr7_3 | exon | 47348309 | 47348374 | 47348309 | ID=Msa1106780-mRNA-1:exon:9669;Parent=Msa1106780-mRNA-1 |
| chr7_3 | exon | 47348063 | 47348188 | 47348063 | ID=Msa1106780-mRNA-1:exon:9668;Parent=Msa1106780-mRNA-1 |
| chr7_3 | exon | 47347893 | 47347968 | 47347893 | ID=Msa1106780-mRNA-1:exon:9667;Parent=Msa1106780-mRNA-1 |
| chr7_3 | exon | 47347590 | 47347670 | 47347590 | ID=Msa1106780-mRNA-1:exon:9666;Parent=Msa1106780-mRNA-1 |
| chr7_3 | exon | 47347248 | 47347464 | 47347248 | ID=Msa1106780-mRNA-1:exon:9665;Parent=Msa1106780-mRNA-1 |
| chr7_3 | exon | 47346910 | 47347120 | 47346910 | ID=Msa1106780-mRNA-1:exon:9664;Parent=Msa1106780-mRNA-1 |
| chr7_3 | exon | 47346599 | 47346808 | 47346599 | ID=Msa1106780-mRNA-1:exon:9663;Parent=Msa1106780-mRNA-1 |
| chr7_3 | exon | 47346309 | 47346500 | 47346309 | ID=Msa1106780-mRNA-1:exon:9662;Parent=Msa1106780-mRNA-1 |
| chr7_3 | CDS | 47350742 | 47350791 | 47350742 | ID=Msa1106780-mRNA-1:cds;Parent=Msa1106780-mRNA-1 |
| chr7_3 | CDS | 47349288 | 47349343 | 47349288 | ID=Msa1106780-mRNA-1:cds;Parent=Msa1106780-mRNA-1 |
| chr7_3 | CDS | 47348597 | 47348775 | 47348597 | ID=Msa1106780-mRNA-1:cds;Parent=Msa1106780-mRNA-1 |
| chr7_3 | CDS | 47348309 | 47348374 | 47348309 | ID=Msa1106780-mRNA-1:cds;Parent=Msa1106780-mRNA-1 |
| chr7_3 | CDS | 47348063 | 47348188 | 47348063 | ID=Msa1106780-mRNA-1:cds;Parent=Msa1106780-mRNA-1 |
| chr7_3 | CDS | 47347893 | 47347968 | 47347893 | ID=Msa1106780-mRNA-1:cds;Parent=Msa1106780-mRNA-1 |
| chr7_3 | CDS | 47347590 | 47347670 | 47347590 | ID=Msa1106780-mRNA-1:cds;Parent=Msa1106780-mRNA-1 |
| chr7_3 | CDS | 47347248 | 47347464 | 47347248 | ID=Msa1106780-mRNA-1:cds;Parent=Msa1106780-mRNA-1 |
| chr7_3 | CDS | 47346910 | 47347120 | 47346910 | ID=Msa1106780-mRNA-1:cds;Parent=Msa1106780-mRNA-1 |
| chr7_3 | CDS | 47346599 | 47346808 | 47346599 | ID=Msa1106780-mRNA-1:cds;Parent=Msa1106780-mRNA-1 |
| chr7_3 | CDS | 47346309 | 47346500 | 47346309 | ID=Msa1106780-mRNA-1:cds;Parent=Msa1106780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
