AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1108700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1108700 MtrunA17_Chr7g0242561 92.672 232 14 2 1 232 1 229 9.78e-154 437
Msa1108700 MtrunA17_Chr7g0257751 64.103 234 79 3 1 232 1 231 3.02e-100 301
Msa1108700 MtrunA17_Chr1g0173541 62.931 232 79 4 1 232 1 225 3.28e-94 285
Msa1108700 MtrunA17_Chr4g0059951 57.430 249 86 5 1 232 1 246 2.16e-89 274
Msa1108700 MtrunA17_Chr4g0033371 63.187 182 64 2 51 232 67 245 7.50e-74 233
Msa1108700 MtrunA17_Chr1g0176751 61.850 173 65 1 51 223 119 290 2.00e-69 223
Msa1108700 MtrunA17_Chr0c02g0489761 50.201 249 93 7 1 223 1 244 4.44e-69 221
Msa1108700 MtrunA17_Chr5g0441691 48.133 241 105 3 1 225 1 237 4.90e-69 220
Msa1108700 MtrunA17_Chr8g0387671 64.744 156 55 0 56 211 66 221 6.09e-66 212
Msa1108700 MtrunA17_Chr1g0170281 56.497 177 76 1 47 223 109 284 6.94e-65 211
Msa1108700 MtrunA17_Chr5g0448721 62.112 161 61 0 51 211 91 251 3.27e-64 209
Msa1108700 MtrunA17_Chr3g0098951 51.777 197 92 1 18 211 43 239 1.71e-63 206
Msa1108700 MtrunA17_Chr3g0131181 56.250 176 76 1 48 223 21 195 2.09e-62 203
Msa1108700 MtrunA17_Chr1g0176421 55.367 177 78 1 47 223 152 327 2.17e-62 206
Msa1108700 MtrunA17_Chr8g0385341 55.491 173 76 1 39 211 14 185 5.10e-61 199
Msa1108700 MtrunA17_Chr5g0444171 53.179 173 81 0 39 211 75 247 2.46e-60 198
Msa1108700 MtrunA17_Chr7g0267751 55.882 170 75 0 56 225 135 304 2.81e-60 199
Msa1108700 MtrunA17_Chr1g0200601 53.488 172 79 1 52 223 26 196 3.92e-60 196
Msa1108700 MtrunA17_Chr5g0397101 56.216 185 80 1 26 210 38 221 4.22e-60 197
Msa1108700 MtrunA17_Chr4g0074811 48.241 199 98 2 16 211 50 246 1.77e-59 196
Msa1108700 MtrunA17_Chr5g0444181 48.387 186 90 1 26 211 67 246 3.07e-59 187
Msa1108700 MtrunA17_Chr1g0157131 58.333 156 65 0 56 211 74 229 2.42e-58 192
Msa1108700 MtrunA17_Chr7g0267771 52.747 182 83 2 51 232 83 261 8.23e-58 190
Msa1108700 MtrunA17_Chr1g0203881 45.714 175 94 1 41 215 27 200 3.55e-49 168
Msa1108700 MtrunA17_Chr5g0405421 43.590 195 103 3 21 211 65 256 6.76e-48 166
Msa1108700 MtrunA17_Chr8g0374701 47.283 184 90 2 49 225 118 301 7.28e-46 160
Msa1108700 MtrunA17_Chr5g0402551 47.423 194 91 4 41 225 116 307 7.75e-46 160
Msa1108700 MtrunA17_Chr4g0074791 43.523 193 107 2 25 215 63 255 9.66e-46 159
Msa1108700 MtrunA17_Chr7g0276111 46.821 173 84 3 49 215 137 307 6.73e-45 158
Msa1108700 MtrunA17_Chr4g0045261 47.953 171 85 2 49 215 130 300 7.87e-43 152
Msa1108700 MtrunA17_Chr7g0256001 47.399 173 83 3 49 215 134 304 1.97e-42 151
Msa1108700 MtrunA17_Chr3g0127571 44.751 181 92 3 51 225 133 311 4.57e-42 150
Msa1108700 MtrunA17_Chr3g0132591 35.632 174 102 2 52 225 108 271 4.21e-30 116
Msa1108700 MtrunA17_Chr3g0107011 38.816 152 88 3 54 205 12 158 2.79e-27 108
Msa1108700 MtrunA17_Chr8g0355131 48.113 106 51 1 104 205 91 196 6.56e-27 107
Msa1108700 MtrunA17_Chr4g0001331 39.474 152 87 3 54 205 18 164 2.50e-26 105
Msa1108700 MtrunA17_Chr5g0432471 38.125 160 94 3 48 207 4 158 1.10e-25 104
Msa1108700 MtrunA17_Chr4g0074111 35.256 156 96 3 52 207 14 164 5.49e-25 101
Msa1108700 MtrunA17_Chr1g0190131 34.337 166 105 3 50 215 3 164 8.34e-25 99.0
Msa1108700 MtrunA17_Chr2g0284031 36.571 175 94 4 43 205 6 175 1.13e-24 101
Msa1108700 MtrunA17_Chr5g0432491 36.424 151 92 2 55 205 22 168 1.53e-24 100
Msa1108700 MtrunA17_Chr7g0274941 29.609 179 119 4 55 232 15 187 1.80e-24 98.6
Msa1108700 MtrunA17_Chr6g0453681 35.714 168 104 2 56 223 19 182 4.18e-24 100
Msa1108700 MtrunA17_Chr6g0468751 35.714 168 104 2 56 223 19 182 5.66e-24 99.8
Msa1108700 MtrunA17_Chr8g0379091 36.111 180 99 5 26 205 7 170 9.41e-24 99.0
Msa1108700 MtrunA17_Chr7g0244521 39.474 152 87 3 54 205 10 156 1.20e-23 98.6
Msa1108700 MtrunA17_Chr1g0150321 39.073 151 87 3 55 205 12 157 2.38e-23 97.4
Msa1108700 MtrunA17_Chr4g0063881 32.558 172 111 3 55 225 10 177 3.97e-23 97.1
Msa1108700 MtrunA17_Chr8g0351491 32.738 168 107 3 58 225 18 179 6.54e-23 94.0
Msa1108700 MtrunA17_Chr5g0441011 36.667 150 91 2 56 205 13 158 6.82e-23 96.3
Msa1108700 MtrunA17_Chr2g0302431 34.437 151 95 2 55 205 19 165 1.12e-22 95.9
Msa1108700 MtrunA17_Chr5g0428031 31.977 172 112 3 55 225 8 175 1.58e-22 95.1
Msa1108700 MtrunA17_Chr3g0140631 33.708 178 106 4 58 232 39 207 1.58e-22 93.6
Msa1108700 MtrunA17_Chr8g0353621 33.333 168 106 3 58 225 12 173 1.81e-22 92.8
Msa1108700 MtrunA17_Chr4g0013131 36.424 151 91 3 55 205 11 156 3.44e-22 94.4
Msa1108700 MtrunA17_Chr3g0107051 36.424 151 91 3 55 205 20 165 8.22e-22 93.2
Msa1108700 MtrunA17_Chr1g0188031 35.526 152 94 2 55 205 19 167 8.93e-22 92.8
Msa1108700 MtrunA17_Chr8g0346071 30.636 173 113 4 55 225 16 183 1.50e-21 92.4
Msa1108700 MtrunA17_Chr8g0346081 30.636 173 113 4 55 225 16 183 1.70e-21 92.0
Msa1108700 MtrunA17_Chr2g0284011 35.099 151 93 3 55 205 11 156 2.04e-21 92.0
Msa1108700 MtrunA17_Chr3g0114511 35.714 154 92 3 54 207 30 176 3.14e-21 91.7
Msa1108700 MtrunA17_Chr2g0333821 40.132 152 86 3 54 205 12 158 3.66e-21 91.3
Msa1108700 MtrunA17_Chr8g0374571 38.065 155 84 5 54 205 21 166 4.79e-21 90.1
Msa1108700 MtrunA17_Chr4g0055451 38.065 155 88 5 52 205 1 148 7.05e-21 89.4
Msa1108700 MtrunA17_Chr2g0304111 31.609 174 112 3 55 225 22 191 1.34e-20 89.7
Msa1108700 MtrunA17_Chr3g0132671 34.868 152 91 3 72 223 69 212 1.43e-20 89.7
Msa1108700 MtrunA17_Chr1g0205421 32.240 183 114 6 47 225 3 179 1.49e-20 89.7
Msa1108700 MtrunA17_Chr5g0402661 38.158 152 88 4 54 205 16 161 9.06e-20 86.7
Msa1108700 MtrunA17_Chr8g0345801 29.944 177 119 4 56 232 15 186 1.23e-19 85.1
Msa1108700 MtrunA17_Chr4g0045371 38.065 155 84 5 54 205 21 166 1.83e-19 85.9
Msa1108700 MtrunA17_Chr3g0091421 32.692 156 100 3 52 207 8 158 2.07e-19 84.0
Msa1108700 MtrunA17_Chr3g0091281 33.333 156 99 3 52 207 8 158 3.54e-19 83.2
Msa1108700 MtrunA17_Chr8g0385281 35.669 157 89 5 52 205 1 148 5.10e-19 84.7
Msa1108700 MtrunA17_Chr1g0162301 37.419 155 85 5 54 205 22 167 5.58e-19 84.7
Msa1108700 MtrunA17_Chr3g0091311 32.051 156 101 3 52 207 8 158 7.35e-19 82.8
Msa1108700 MtrunA17_Chr5g0399911 35.758 165 89 5 53 205 3 162 1.71e-18 83.2
Msa1108700 MtrunA17_Chr5g0426521 36.601 153 89 5 54 205 2 147 2.40e-18 82.4
Msa1108700 MtrunA17_Chr2g0277501 34.839 155 89 5 54 205 2 147 3.17e-18 82.4
Msa1108700 MtrunA17_Chr3g0123791 35.484 155 92 4 52 205 1 148 5.29e-18 81.6
Msa1108700 MtrunA17_Chr3g0131061 35.484 155 88 5 54 205 2 147 7.21e-18 81.3
Msa1108700 MtrunA17_Chr1g0166101 31.788 151 100 1 55 205 23 170 8.12e-18 81.6
Msa1108700 MtrunA17_Chr6g0453671 37.600 125 74 2 99 223 62 182 9.05e-18 81.3
Msa1108700 MtrunA17_Chr3g0129721 27.684 177 126 2 49 225 18 192 1.10e-17 80.1
Msa1108700 MtrunA17_Chr8g0381821 35.897 156 86 5 54 205 2 147 1.96e-17 80.1
Msa1108700 MtrunA17_Chr4g0069301 31.034 174 113 3 55 225 25 194 2.70e-17 80.1
Msa1108700 MtrunA17_Chr3g0091291 35.185 108 65 3 100 207 4 106 1.02e-16 76.3
Msa1108700 MtrunA17_Chr1g0167311 31.469 143 94 2 62 204 121 259 8.32e-16 75.9
Msa1108700 MtrunA17_Chr1g0197721 30.968 155 99 3 53 203 44 194 1.34e-15 75.5
Msa1108700 MtrunA17_Chr7g0244561 33.143 175 109 4 55 225 15 185 1.43e-15 75.1
Msa1108700 MtrunA17_Chr7g0245031 28.659 164 113 2 62 225 154 313 1.48e-15 75.1
Msa1108700 MtrunA17_Chr7g0261491 31.469 143 94 2 62 204 126 264 2.95e-15 74.3
Msa1108700 MtrunA17_Chr1g0167351 30.769 143 95 2 62 204 116 254 3.67e-15 74.3
Msa1108700 MtrunA17_Chr3g0140071 31.788 151 96 4 55 204 8 152 4.72e-15 73.6
Msa1108700 MtrunA17_Chr3g0135951 30.769 143 95 2 62 204 100 238 6.18e-15 73.6
Msa1108700 MtrunA17_Chr1g0153321 29.371 143 97 2 62 204 114 252 7.98e-15 73.2
Msa1108700 MtrunA17_Chr2g0299781 30.070 143 96 2 62 204 119 257 1.24e-14 72.8
Msa1108700 MtrunA17_Chr4g0008561 25.000 180 133 2 46 225 9 186 1.30e-14 72.8
Msa1108700 MtrunA17_Chr1g0187581 27.972 143 99 2 62 204 123 261 3.06e-14 71.6
Msa1108700 MtrunA17_Chr1g0183651 30.070 143 96 2 62 204 126 264 4.41e-14 70.9
Msa1108700 MtrunA17_Chr4g0072831 28.655 171 97 3 55 225 9 154 1.58e-13 68.6
Msa1108700 MtrunA17_Chr1g0170551 29.605 152 101 4 54 205 5 150 1.80e-13 69.3
Msa1108700 MtrunA17_Chr4g0059751 25.989 177 120 3 56 225 89 261 2.58e-13 68.6
Msa1108700 MtrunA17_Chr8g0358921 31.677 161 97 7 52 205 44 198 3.24e-13 68.2
Msa1108700 MtrunA17_Chr4g0018201 27.179 195 131 5 13 205 719 904 4.34e-13 68.2
Msa1108700 MtrunA17_Chr5g0428981 26.667 195 132 5 13 205 723 908 8.46e-13 67.4
Msa1108700 MtrunA17_Chr3g0125381 35.106 94 58 1 113 206 8 98 1.16e-12 65.1
Msa1108700 MtrunA17_Chr2g0326531 29.293 198 126 6 42 231 105 296 2.85e-12 65.5
Msa1108700 MtrunA17_Chr8g0380661 31.973 147 89 4 60 205 8 144 2.96e-12 65.1
Msa1108700 MtrunA17_Chr6g0486611 30.065 153 100 4 54 205 7 153 3.33e-12 65.5
Msa1108700 MtrunA17_Chr1g0146151 29.605 152 100 3 55 205 8 153 3.46e-12 65.1
Msa1108700 MtrunA17_Chr6g0478601 27.317 205 121 6 11 205 70 256 3.58e-12 65.5
Msa1108700 MtrunA17_Chr1g0205931 25.503 149 102 3 62 205 61 205 4.82e-12 65.1
Msa1108700 MtrunA17_Chr7g0272841 27.517 149 99 3 62 205 74 218 9.26e-12 64.3
Msa1108700 MtrunA17_Chr2g0286501 29.605 152 97 3 54 205 47 188 1.03e-11 64.3
Msa1108700 MtrunA17_Chr3g0123491 31.973 147 87 5 49 188 86 226 1.48e-11 63.5
Msa1108700 MtrunA17_Chr8g0369451 28.289 152 100 5 54 204 2 145 1.69e-11 63.2
Msa1108700 MtrunA17_Chr4g0030151 29.299 157 97 6 62 213 45 192 2.92e-11 62.4
Msa1108700 MtrunA17_Chr2g0293491 30.000 150 98 6 61 208 9 153 4.33e-11 61.6
Msa1108700 MtrunA17_Chr2g0276831 29.341 167 101 5 56 215 10 166 5.21e-11 61.6
Msa1108700 MtrunA17_Chr3g0139371 30.851 188 94 7 49 207 67 247 7.52e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1108700 AT3G51850.3 77.586 232 47 4 1 232 1 227 3.67e-128 369
Msa1108700 AT3G51850.2 77.586 232 47 4 1 232 1 227 1.03e-126 368
Msa1108700 AT3G51850.1 77.586 232 47 4 1 232 1 227 1.66e-126 369
Msa1108700 AT3G57530.2 58.750 240 87 4 1 232 1 236 3.95e-94 282
Msa1108700 AT5G12480.1 58.723 235 91 4 1 232 1 232 5.04e-93 283
Msa1108700 AT3G57530.1 58.750 240 87 4 1 232 1 236 5.23e-93 283
Msa1108700 AT5G19450.2 59.657 233 90 3 1 232 1 230 1.69e-90 276
Msa1108700 AT5G19450.1 59.657 233 90 3 1 232 1 230 1.69e-90 276
Msa1108700 AT2G41860.1 58.190 232 92 4 1 232 1 227 4.45e-89 273
Msa1108700 AT2G41860.2 58.190 232 92 4 1 232 1 227 6.85e-89 272
Msa1108700 AT1G74740.1 59.414 239 83 5 1 232 1 232 3.31e-86 266
Msa1108700 AT1G18890.1 68.020 197 57 3 39 232 43 236 6.30e-84 260
Msa1108700 AT2G31500.1 55.556 243 93 6 1 232 1 239 5.08e-79 248
Msa1108700 AT5G12180.1 52.632 228 91 4 1 211 1 228 1.65e-71 227
Msa1108700 AT5G19360.1 56.684 187 79 1 25 211 39 223 2.25e-70 224
Msa1108700 AT3G10660.2 54.592 196 76 2 28 223 170 352 1.73e-65 214
Msa1108700 AT3G10660.1 54.592 196 76 2 28 223 170 352 1.73e-65 214
Msa1108700 AT2G35890.2 59.036 166 67 1 46 211 123 287 5.08e-65 210
Msa1108700 AT2G35890.1 59.036 166 67 1 46 211 123 287 5.08e-65 210
Msa1108700 AT1G50700.3 52.020 198 88 2 21 211 31 228 3.42e-64 207
Msa1108700 AT2G38910.1 55.367 177 78 1 47 223 125 300 3.46e-64 209
Msa1108700 AT5G04870.1 55.738 183 69 1 28 210 134 304 5.17e-64 209
Msa1108700 AT3G20410.2 61.538 156 60 0 56 211 91 246 1.05e-63 207
Msa1108700 AT3G20410.1 61.538 156 60 0 56 211 91 246 1.05e-63 207
Msa1108700 AT1G50700.1 52.020 198 88 2 21 211 31 228 1.07e-63 207
Msa1108700 AT1G50700.2 52.020 198 88 2 21 211 31 228 2.22e-63 206
Msa1108700 AT2G17290.1 61.491 161 62 0 51 211 80 240 2.58e-63 206
Msa1108700 AT2G17290.2 61.491 161 62 0 51 211 80 240 2.58e-63 206
Msa1108700 AT4G35310.2 58.382 173 71 1 51 223 92 263 4.80e-63 206
Msa1108700 AT4G35310.1 58.382 173 71 1 51 223 92 263 4.80e-63 206
Msa1108700 AT4G23650.1 62.179 156 59 0 56 211 78 233 9.34e-63 204
Msa1108700 AT5G23580.1 55.307 179 77 1 33 211 2 177 5.84e-62 201
Msa1108700 AT4G04720.2 54.913 173 76 1 39 211 65 235 5.90e-62 202
Msa1108700 AT4G04720.1 54.913 173 76 1 39 211 65 235 5.90e-62 202
Msa1108700 AT4G38230.4 56.970 165 71 0 47 211 15 179 4.13e-61 199
Msa1108700 AT4G38230.3 56.970 165 71 0 47 211 15 179 4.13e-61 199
Msa1108700 AT4G38230.2 56.970 165 71 0 47 211 45 209 7.38e-61 199
Msa1108700 AT4G21940.3 57.692 156 66 0 56 211 102 257 8.90e-61 198
Msa1108700 AT1G35670.1 50.515 194 93 2 30 223 2 192 1.25e-60 198
Msa1108700 AT4G21940.1 57.692 156 66 0 56 211 102 257 3.00e-60 198
Msa1108700 AT4G21940.2 57.692 156 66 0 56 211 102 257 3.79e-60 198
Msa1108700 AT1G61950.1 47.805 205 97 4 8 211 59 254 8.81e-59 194
Msa1108700 AT1G76040.3 57.051 156 67 0 56 211 112 267 2.25e-58 192
Msa1108700 AT1G76040.2 57.051 156 67 0 56 211 112 267 5.69e-58 192
Msa1108700 AT4G09570.1 48.947 190 94 2 34 223 5 191 2.62e-56 187
Msa1108700 AT4G04740.4 56.643 143 62 0 69 211 82 224 2.61e-52 177
Msa1108700 AT4G04740.6 56.643 143 62 0 69 211 82 224 2.61e-52 177
Msa1108700 AT4G04740.5 56.643 143 62 0 69 211 82 224 2.61e-52 177
Msa1108700 AT4G04740.3 56.643 143 62 0 69 211 82 224 2.61e-52 177
Msa1108700 AT4G04740.1 56.643 143 62 0 69 211 82 224 2.61e-52 177
Msa1108700 AT4G04740.7 56.643 143 62 0 69 211 82 224 2.61e-52 177
Msa1108700 AT4G04740.2 56.643 143 62 0 69 211 82 224 2.73e-52 177
Msa1108700 AT4G04710.2 41.850 227 107 5 1 223 1 206 2.68e-51 174
Msa1108700 AT4G04710.1 41.850 227 107 5 1 223 1 206 3.03e-51 174
Msa1108700 AT4G04710.4 41.850 227 107 5 1 223 1 206 3.21e-51 174
Msa1108700 AT2G17890.1 46.893 177 92 1 51 225 103 279 1.80e-49 170
Msa1108700 AT5G66210.6 42.857 203 98 3 27 211 17 219 1.08e-48 166
Msa1108700 AT5G66210.4 42.857 203 98 3 27 211 17 219 1.08e-48 166
Msa1108700 AT5G66210.5 42.857 203 98 3 27 211 17 219 2.01e-48 166
Msa1108700 AT5G66210.3 42.857 203 98 3 27 211 17 219 3.14e-48 166
Msa1108700 AT1G12580.1 43.243 185 104 1 41 225 30 213 5.13e-48 166
Msa1108700 AT5G66210.1 42.857 203 98 3 27 211 17 219 6.56e-48 165
Msa1108700 AT5G66210.2 42.857 203 98 3 27 211 17 219 6.56e-48 165
Msa1108700 AT4G36070.1 37.551 245 130 4 1 225 1 242 1.68e-46 162
Msa1108700 AT4G04700.1 45.930 172 88 2 56 223 28 198 2.45e-46 160
Msa1108700 AT4G36070.2 37.551 245 130 4 1 225 1 242 2.99e-46 161
Msa1108700 AT3G56760.1 49.711 173 79 3 49 215 117 287 1.44e-45 160
Msa1108700 AT2G46700.1 44.670 197 100 4 26 215 112 306 4.82e-45 159
Msa1108700 AT2G41140.1 49.133 173 80 3 49 215 116 286 1.17e-44 157
Msa1108700 AT3G50530.2 47.701 174 83 3 49 216 141 312 5.97e-44 156
Msa1108700 AT1G49580.1 43.939 198 96 4 49 233 143 338 1.10e-43 155
Msa1108700 AT3G19100.1 43.939 198 96 4 49 233 137 332 1.13e-43 155
Msa1108700 AT4G04695.1 44.186 172 91 2 56 223 28 198 2.26e-43 152
Msa1108700 AT3G50530.1 47.399 173 83 3 49 215 141 311 3.34e-43 154
Msa1108700 AT4G04710.3 39.207 227 99 7 1 223 1 192 3.33e-42 149
Msa1108700 AT2G46700.2 49.630 135 67 1 92 225 1 135 2.20e-38 138
Msa1108700 AT2G46700.3 49.630 135 67 1 92 225 1 135 2.20e-38 138
Msa1108700 AT3G49370.1 41.989 181 101 2 49 225 135 315 1.56e-37 138
Msa1108700 AT5G24430.1 41.341 179 101 2 51 225 138 316 6.67e-37 136
Msa1108700 AT5G12480.2 70.115 87 23 2 146 232 55 138 4.26e-34 127
Msa1108700 AT1G12680.1 34.409 186 112 2 40 225 91 266 1.76e-32 123
Msa1108700 AT5G35410.2 36.416 173 103 4 55 225 10 177 4.08e-26 104
Msa1108700 AT5G25110.1 39.073 151 87 3 55 205 42 187 7.40e-26 105
Msa1108700 AT5G35410.1 36.416 173 103 4 55 225 10 177 1.10e-25 104
Msa1108700 AT5G45820.1 37.748 151 89 3 55 205 11 156 4.53e-25 102
Msa1108700 AT4G18700.1 39.073 151 87 3 55 205 25 170 1.10e-24 102
Msa1108700 AT5G45810.1 38.411 151 88 3 55 205 27 172 1.57e-24 101
Msa1108700 AT2G30360.1 33.161 193 120 5 38 225 2 190 1.70e-24 100
Msa1108700 AT3G01090.3 36.905 168 102 2 56 223 19 182 2.31e-24 101
Msa1108700 AT3G01090.1 36.905 168 102 2 56 223 19 182 2.31e-24 101
Msa1108700 AT3G01090.2 36.905 168 102 2 56 223 42 205 2.95e-24 100
Msa1108700 AT2G38490.1 38.158 152 87 5 55 205 27 172 1.55e-23 98.2
Msa1108700 AT5G58380.1 35.065 154 95 3 52 205 8 156 3.45e-23 97.8
Msa1108700 AT4G30960.1 38.462 156 91 3 52 207 20 170 3.88e-23 97.4
Msa1108700 AT4G24400.2 32.558 172 111 3 55 225 8 175 4.42e-23 97.1
Msa1108700 AT1G08650.2 32.317 164 108 2 49 211 8 169 4.69e-23 94.7
Msa1108700 AT4G24400.1 32.558 172 111 3 55 225 8 175 5.14e-23 97.1
Msa1108700 AT3G29160.3 34.524 168 106 2 56 223 20 183 5.20e-23 95.9
Msa1108700 AT1G08650.1 32.317 164 108 2 49 211 8 169 6.60e-23 94.4
Msa1108700 AT5G39440.1 33.929 168 107 2 56 223 19 182 7.78e-23 96.7
Msa1108700 AT2G26980.2 35.762 151 93 2 55 205 13 159 8.25e-23 94.0
Msa1108700 AT2G25090.1 34.225 187 116 4 45 229 4 185 8.50e-23 96.7
Msa1108700 AT3G23000.1 34.161 161 103 1 45 205 14 171 1.16e-22 95.9
Msa1108700 AT3G29160.1 34.524 168 106 2 56 223 20 183 1.44e-22 95.9
Msa1108700 AT3G29160.2 34.524 168 106 2 56 223 20 183 1.44e-22 95.9
Msa1108700 AT1G29230.1 37.748 151 89 3 55 205 73 218 1.68e-22 95.9
Msa1108700 AT1G01140.1 32.609 184 117 3 45 225 8 187 2.44e-22 95.1
Msa1108700 AT1G01140.3 32.609 184 117 3 45 225 8 187 2.64e-22 95.1
Msa1108700 AT2G26980.1 35.762 151 93 2 55 205 13 159 2.66e-22 94.4
Msa1108700 AT1G01140.2 32.609 184 117 3 45 225 8 187 2.74e-22 94.7
Msa1108700 AT2G26980.3 35.762 151 93 2 55 205 13 159 2.95e-22 94.7
Msa1108700 AT2G26980.4 35.762 151 93 2 55 205 23 169 3.61e-22 94.7
Msa1108700 AT5G21326.1 35.099 151 94 2 55 205 12 158 4.08e-22 94.4
Msa1108700 AT3G04530.1 33.333 159 102 3 52 208 7 163 4.46e-22 92.0
Msa1108700 AT2G26980.5 35.762 151 93 2 55 205 13 159 5.44e-22 94.0
Msa1108700 AT2G45490.2 32.738 168 107 3 58 225 24 185 5.77e-22 91.3
Msa1108700 AT3G17510.1 33.908 174 108 3 55 225 19 188 6.21e-22 94.0
Msa1108700 AT1G30270.1 33.775 151 96 2 55 205 30 176 6.83e-22 94.0
Msa1108700 AT1G30270.2 33.775 151 96 2 55 205 30 176 7.61e-22 94.0
Msa1108700 AT4G32830.1 33.146 178 114 3 29 206 5 177 8.39e-22 91.7
Msa1108700 AT2G45490.1 32.738 168 107 3 58 225 24 185 1.07e-21 91.3
Msa1108700 AT2G25880.1 34.899 149 93 2 58 206 27 171 1.43e-21 90.9
Msa1108700 AT2G34180.1 33.889 180 108 4 27 206 34 202 1.63e-21 92.8
Msa1108700 AT2G25880.4 34.899 149 93 2 58 206 40 184 1.81e-21 90.9
Msa1108700 AT2G25880.3 34.899 149 93 2 58 206 88 232 2.42e-21 91.3
Msa1108700 AT5G01810.3 37.086 151 90 3 55 205 11 156 3.38e-21 91.3
Msa1108700 AT5G10930.1 37.500 152 89 4 55 205 11 157 3.57e-21 91.7
Msa1108700 AT5G01810.1 37.086 151 90 3 55 205 11 156 4.11e-21 91.3
Msa1108700 AT5G01810.2 37.086 151 90 3 55 205 11 156 4.11e-21 91.3
Msa1108700 AT5G07070.1 36.364 154 93 3 52 205 8 156 4.88e-21 91.3
Msa1108700 AT4G14580.1 32.911 158 103 2 48 205 13 167 8.93e-21 90.5
Msa1108700 AT5G21222.1 31.977 172 110 4 55 223 12 179 1.12e-19 87.8
Msa1108700 AT5G21222.2 31.977 172 110 4 55 223 12 179 1.12e-19 87.8
Msa1108700 AT5G21222.4 31.977 172 110 4 55 223 12 179 1.12e-19 87.8
Msa1108700 AT5G21222.3 31.977 172 110 4 55 223 12 179 1.12e-19 87.8
Msa1108700 AT1G48260.1 33.143 175 108 5 55 225 10 179 1.79e-19 86.7
Msa1108700 AT5G08590.1 37.821 156 83 5 54 205 2 147 2.86e-19 85.5
Msa1108700 AT4G33950.2 36.774 155 86 5 54 205 19 164 4.83e-19 84.7
Msa1108700 AT3G50500.1 36.774 155 86 5 54 205 21 166 6.62e-19 84.7
Msa1108700 AT3G50500.2 36.774 155 86 5 54 205 21 166 7.34e-19 84.7
Msa1108700 AT4G33950.1 36.774 155 86 5 54 205 19 164 1.00e-18 84.3
Msa1108700 AT5G57630.1 33.333 171 109 3 55 225 11 176 1.21e-18 84.3
Msa1108700 AT5G57630.2 33.333 171 109 3 55 225 11 176 1.27e-18 84.3
Msa1108700 AT5G01820.1 32.759 174 109 4 55 225 21 189 8.81e-18 82.0
Msa1108700 AT3G61960.1 30.000 170 117 2 56 225 10 177 1.37e-17 81.6
Msa1108700 AT3G61960.2 30.000 170 117 2 56 225 10 177 1.43e-17 81.6
Msa1108700 AT5G66880.1 35.484 155 88 5 54 205 20 165 1.65e-17 80.9
Msa1108700 AT5G66880.2 35.484 155 88 5 54 205 20 165 1.65e-17 80.9
Msa1108700 AT5G63650.1 35.484 155 88 5 54 205 2 147 1.67e-17 80.9
Msa1108700 AT1G78290.3 35.526 152 92 4 54 205 2 147 2.01e-17 80.5
Msa1108700 AT1G78290.2 35.526 152 92 4 54 205 2 147 2.01e-17 80.5
Msa1108700 AT4G40010.1 35.294 153 91 4 54 205 2 147 3.22e-17 79.7
Msa1108700 AT1G60940.1 33.548 155 91 5 54 205 2 147 1.06e-16 78.6
Msa1108700 AT1G60940.2 33.548 155 91 5 54 205 2 147 1.06e-16 78.6
Msa1108700 AT1G10940.1 33.548 155 91 5 54 205 2 147 1.42e-16 78.2
Msa1108700 AT3G08720.1 29.268 164 112 2 62 225 146 305 3.15e-16 77.8
Msa1108700 AT3G08720.3 29.268 164 112 2 62 225 146 305 3.15e-16 77.8
Msa1108700 AT3G08720.4 29.268 164 112 2 62 225 146 305 3.15e-16 77.8
Msa1108700 AT3G08720.2 29.268 164 112 2 62 225 146 305 3.15e-16 77.8
Msa1108700 AT2G37840.1 27.647 170 121 2 56 225 12 179 6.86e-16 77.0
Msa1108700 AT3G08730.1 27.326 172 121 2 54 225 132 299 9.57e-16 76.3
Msa1108700 AT3G08730.2 27.326 172 121 2 54 225 132 299 9.57e-16 76.3
Msa1108700 AT1G30640.2 31.724 145 93 4 62 205 126 265 4.92e-15 74.3
Msa1108700 AT1G30640.1 31.724 145 93 4 62 205 126 265 4.92e-15 74.3
Msa1108700 AT2G20470.3 30.769 143 95 2 62 204 130 268 5.04e-15 74.3
Msa1108700 AT1G30640.3 31.724 145 93 4 62 205 33 172 5.07e-15 73.9
Msa1108700 AT2G20470.2 30.769 143 95 2 62 204 130 268 5.33e-15 74.3
Msa1108700 AT2G20470.1 30.769 143 95 2 62 204 130 268 5.33e-15 74.3
Msa1108700 AT5G04510.3 29.078 141 96 2 63 203 51 187 5.99e-15 73.2
Msa1108700 AT5G04510.2 29.078 141 96 2 63 203 51 187 6.22e-15 73.6
Msa1108700 AT5G04510.1 29.078 141 96 2 63 203 51 187 6.24e-15 73.9
Msa1108700 AT3G10540.1 30.201 149 96 3 59 203 44 188 7.71e-15 73.6
Msa1108700 AT3G17510.2 35.135 111 66 2 118 225 1 108 1.31e-14 72.4
Msa1108700 AT1G66750.1 32.727 165 103 6 46 208 2 160 1.41e-14 72.4
Msa1108700 AT3G53930.1 26.471 170 123 2 41 210 5 172 1.55e-14 72.8
Msa1108700 AT3G53930.2 26.471 170 123 2 41 210 5 172 1.56e-14 72.8
Msa1108700 AT2G19400.1 30.769 143 95 2 62 204 111 249 1.71e-14 72.8
Msa1108700 AT1G09000.2 27.517 149 99 3 62 205 75 219 1.84e-14 72.8
Msa1108700 AT1G10940.2 31.902 163 91 6 54 205 2 155 2.01e-14 72.0
Msa1108700 AT2G23030.1 34.194 155 90 5 54 205 2 147 2.09e-14 71.6
Msa1108700 AT1G09000.1 27.517 149 99 3 62 205 75 219 2.36e-14 72.4
Msa1108700 AT1G30270.3 44.737 76 39 1 130 205 7 79 3.35e-14 71.6
Msa1108700 AT4G14350.3 29.371 143 97 2 62 204 125 263 4.38e-14 71.2
Msa1108700 AT4G14350.2 29.371 143 97 2 62 204 125 263 4.65e-14 71.2
Msa1108700 AT4G14350.1 29.371 143 97 2 62 204 125 263 4.65e-14 71.2
Msa1108700 AT4G14350.4 29.371 143 97 2 62 204 125 263 4.65e-14 71.2
Msa1108700 AT3G23310.1 29.371 143 97 2 62 204 126 264 7.18e-14 70.9
Msa1108700 AT5G57565.4 33.071 127 73 3 115 233 17 139 1.07e-13 67.4
Msa1108700 AT4G33080.1 29.371 143 97 2 62 204 100 238 2.40e-13 69.3
Msa1108700 AT4G33080.2 29.371 143 97 2 62 204 100 238 2.56e-13 69.3
Msa1108700 AT5G09890.2 29.371 143 97 2 62 204 108 246 2.78e-13 68.9
Msa1108700 AT5G09890.1 29.371 143 97 2 62 204 108 246 2.83e-13 68.9
Msa1108700 AT1G54960.1 25.641 156 107 3 55 205 67 218 3.30e-13 68.9
Msa1108700 AT1G54960.2 25.641 156 107 3 55 205 67 218 3.30e-13 68.9
Msa1108700 AT1G49180.1 29.255 188 120 6 52 235 3 181 5.16e-13 68.2
Msa1108700 AT1G49180.2 29.255 188 120 6 52 235 3 181 5.68e-13 67.8
Msa1108700 AT3G17850.1 28.497 193 125 5 15 205 846 1027 6.09e-13 68.2
Msa1108700 AT4G29810.1 28.070 171 106 6 42 205 54 214 9.54e-13 67.0
Msa1108700 AT4G29810.2 28.070 171 106 6 42 205 63 223 1.05e-12 67.0
Msa1108700 AT5G57565.5 34.234 111 69 2 115 225 17 123 1.08e-12 63.9
Msa1108700 AT5G57565.1 34.234 111 69 2 115 225 17 123 1.08e-12 63.9
Msa1108700 AT4G29810.3 28.070 171 106 6 42 205 63 223 1.09e-12 67.0
Msa1108700 AT1G50240.3 30.323 155 101 5 51 205 2 149 1.38e-12 67.4
Msa1108700 AT1G50240.2 30.323 155 101 5 51 205 2 149 1.38e-12 67.4
Msa1108700 AT1G18040.1 31.013 158 98 5 54 208 10 159 1.73e-12 66.6
Msa1108700 AT1G79250.1 28.641 206 130 5 21 224 112 302 2.41e-12 66.2
Msa1108700 AT1G79250.3 28.641 206 130 5 21 224 112 302 2.41e-12 66.2
Msa1108700 AT1G79250.2 28.641 206 130 5 21 224 112 302 2.41e-12 66.2
Msa1108700 AT1G79250.4 28.641 206 130 5 21 224 112 302 2.41e-12 66.2
Msa1108700 AT4G28860.1 30.263 152 99 4 55 205 8 153 2.65e-12 65.9
Msa1108700 AT3G06030.1 25.714 175 119 4 36 205 50 218 3.10e-12 66.2
Msa1108700 AT1G48260.2 36.082 97 56 2 132 225 1 94 4.67e-12 65.1
Msa1108700 AT1G48260.4 36.082 97 56 2 132 225 1 94 4.67e-12 65.1
Msa1108700 AT1G48260.3 36.082 97 56 2 132 225 1 94 4.67e-12 65.1
Msa1108700 AT1G48260.5 36.082 97 56 2 132 225 1 94 4.67e-12 65.1
Msa1108700 AT4G28860.2 30.263 152 99 4 55 205 8 153 5.25e-12 65.1
Msa1108700 AT4G28880.3 29.605 152 100 4 55 205 8 153 5.95e-12 65.1
Msa1108700 AT4G28880.2 29.605 152 100 4 55 205 8 153 5.95e-12 65.1
Msa1108700 AT4G28880.1 29.605 152 100 4 55 205 8 153 5.95e-12 65.1
Msa1108700 AT4G28880.4 29.605 152 100 4 55 205 8 153 5.95e-12 65.1
Msa1108700 AT1G45160.1 30.247 162 89 4 54 205 668 815 6.01e-12 65.5
Msa1108700 AT1G45160.2 30.247 162 89 4 54 205 668 815 6.45e-12 65.1
Msa1108700 AT1G48490.4 27.638 199 121 5 14 205 792 974 1.42e-11 64.3
Msa1108700 AT1G48490.3 27.638 199 121 5 14 205 791 973 1.47e-11 64.3
Msa1108700 AT1G48490.2 27.638 199 121 5 14 205 791 973 1.47e-11 64.3
Msa1108700 AT1G48490.1 27.638 199 121 5 14 205 791 973 1.47e-11 64.3
Msa1108700 AT5G62310.1 28.495 186 106 6 30 205 731 899 1.76e-11 63.9
Msa1108700 AT1G32320.1 31.034 145 88 4 62 205 54 187 1.83e-11 63.2
Msa1108700 AT3G48750.1 29.221 154 102 6 54 205 2 150 2.29e-11 62.8
Msa1108700 AT5G57630.3 39.130 92 52 2 134 225 1 88 2.31e-11 62.8
Msa1108700 AT4G22940.1 24.615 195 130 5 25 210 69 255 2.58e-11 63.2
Msa1108700 AT3G12690.1 30.968 155 101 3 54 206 183 333 3.70e-11 62.8
Msa1108700 AT3G12690.3 30.968 155 101 3 54 206 183 333 3.70e-11 62.8
Msa1108700 AT3G12690.2 30.968 155 101 3 54 206 183 333 3.70e-11 62.8
Msa1108700 AT5G60550.1 30.726 179 110 6 61 231 112 284 3.91e-11 62.4
Msa1108700 AT4G38230.1 74.286 35 9 0 177 211 1 35 4.00e-11 62.4
Msa1108700 AT4G22940.2 24.615 195 130 5 25 210 69 255 4.41e-11 62.4
Msa1108700 AT5G57565.2 36.264 91 54 2 115 205 17 103 4.80e-11 59.3
Msa1108700 AT5G57565.6 36.264 91 54 2 115 205 17 103 4.80e-11 59.3
Msa1108700 AT4G32660.2 30.645 186 93 8 50 206 65 243 6.14e-11 61.6
Msa1108700 AT4G32660.3 30.645 186 93 8 50 206 57 235 6.38e-11 62.0
Msa1108700 AT4G32660.1 30.645 186 93 8 50 206 65 243 6.42e-11 62.0
Msa1108700 AT1G18350.1 30.822 146 90 5 62 205 51 187 8.89e-11 61.2

Find 62 sgRNAs with CRISPR-Local

Find 73 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGCTGAAAGCTATTGATTT+TGG 0.162467 7_3:-51869429 Msa1108700:CDS
CGGTGGTTTCAGTTCGTTTA+GGG 0.234830 7_3:+51869940 None:intergenic
TTCCATGTTGTCGGAGGTTT+TGG 0.265635 7_3:+51869878 None:intergenic
GCGGTGGTTTCAGTTCGTTT+AGG 0.361159 7_3:+51869939 None:intergenic
GAACTCGGCCGCGGCGAATT+CGG 0.367931 7_3:-51869834 Msa1108700:CDS
CAGGTATGGAACTGAATCTT+AGG 0.408571 7_3:-51869386 Msa1108700:CDS
TGTTGCTAGAGGGCATTATA+CGG 0.412074 7_3:-51869577 Msa1108700:CDS
GCGGCGAGGACGGTGACCGG+TGG 0.412515 7_3:+51869903 None:intergenic
GGCGGTTCGTAGCTTCCGTT+TGG 0.416280 7_3:+51869752 None:intergenic
TAATGCTGTTCATCTTGTTA+TGG 0.421011 7_3:-51869634 Msa1108700:CDS
TTATGTGTAGTGAGTGTGTT+TGG 0.423735 7_3:-51869338 Msa1108700:CDS
ATTCGCCGCGGCCGAGTTCA+CGG 0.434772 7_3:+51869838 None:intergenic
TTCGCAAACAAGAAATTCTC+CGG 0.445213 7_3:+51869468 None:intergenic
TCTTCGCGTGCGACGGCGGC+CGG 0.448262 7_3:+51869993 None:intergenic
GTCACAATACTCGAACTCTT+AGG 0.457133 7_3:+51869681 None:intergenic
GTGGCGGCGAGGACGGTGAC+CGG 0.472986 7_3:+51869900 None:intergenic
TTTCTTGTTTGCGAATAAGA+AGG 0.477480 7_3:-51869460 Msa1108700:CDS
TACTCGAACTCTTAGGCAAA+TGG 0.483079 7_3:+51869688 None:intergenic
TATATTCTTTAAGCCAGGTA+TGG 0.483413 7_3:-51869400 Msa1108700:CDS
GTGGTCGTGGTTGGAGAAAG+AGG 0.489793 7_3:+51869962 None:intergenic
TTATGGAGCTTTGTGAAGGT+GGG 0.491764 7_3:-51869617 Msa1108700:CDS
GTTATGGAGCTTTGTGAAGG+TGG 0.492221 7_3:-51869618 Msa1108700:CDS
TCGTTTAGGGTGGTCGTGGT+TGG 0.494871 7_3:+51869953 None:intergenic
CGGCGAGGACGGTGACCGGT+GGG 0.495457 7_3:+51869904 None:intergenic
CTAAGATTCAGTTCCATACC+TGG 0.495467 7_3:+51869387 None:intergenic
TTGTCTATATTCTTTAAGCC+AGG 0.504620 7_3:-51869405 Msa1108700:CDS
CAGTTCGTTTAGGGTGGTCG+TGG 0.513335 7_3:+51869949 None:intergenic
ATCGACCGTGAACTCGGCCG+CGG 0.517617 7_3:-51869843 Msa1108700:CDS
TACCTCATCGACCGTGAACT+CGG 0.519409 7_3:-51869849 Msa1108700:CDS
GATTCATCGCGATCTTAAGC+CGG 0.527891 7_3:-51869487 Msa1108700:CDS
GACATCTTCGCGTGCGACGG+CGG 0.528557 7_3:+51869989 None:intergenic
GGGTAACTGCTGCAGATCTC+CGG 0.530101 7_3:-51870012 Msa1108700:CDS
GGCGCATGATAGCAACTTCA+CGG 0.536416 7_3:+51869709 None:intergenic
TTTGACATCTTCGCGTGCGA+CGG 0.541557 7_3:+51869986 None:intergenic
GTAACGGTCTTCCATGTTGT+CGG 0.542256 7_3:+51869869 None:intergenic
AACTGAATCTTAGGTGTAGT+GGG 0.552879 7_3:-51869377 Msa1108700:CDS
CCTGCAAAAGCATCTCCAAA+CGG 0.557623 7_3:-51869767 Msa1108700:CDS
GTCACGGTCGATACAGAGAT+AGG 0.562723 7_3:+51869806 None:intergenic
GAACTGAATCTTAGGTGTAG+TGG 0.568341 7_3:-51869378 Msa1108700:CDS
GAGCAGCCGCGGCGGTTGCG+AGG 0.575061 7_3:-51869551 Msa1108700:CDS
TATGGAGCTTTGTGAAGGTG+GGG 0.575792 7_3:-51869616 Msa1108700:CDS
CTTGTTATGGAGCTTTGTGA+AGG 0.577231 7_3:-51869621 Msa1108700:CDS
TTGATCGGATTGTTGCTAGA+GGG 0.586916 7_3:-51869587 Msa1108700:CDS
TTTGATCGGATTGTTGCTAG+AGG 0.587507 7_3:-51869588 Msa1108700:CDS
GTGCAACTTTGTCATAAGCA+TGG 0.587789 7_3:-51869513 Msa1108700:CDS
CGAGTAGCTCGCGAGTGTCA+CGG 0.589369 7_3:+51869790 None:intergenic
GGCGGTTGCGAGGACGATTG+TGG 0.594012 7_3:-51869541 Msa1108700:CDS
ACGGTCTTCCATGTTGTCGG+AGG 0.594375 7_3:+51869872 None:intergenic
TGGTTTCAGTTCGTTTAGGG+TGG 0.597479 7_3:+51869943 None:intergenic
CACCAAAACCTCCGACAACA+TGG 0.599215 7_3:-51869880 Msa1108700:CDS
GACTCTTCGTGAAGCGTGTG+AGG 0.599586 7_3:-51869661 Msa1108700:CDS
GGCGAGGACGGTGACCGGTG+GGG 0.601971 7_3:+51869905 None:intergenic
GTTCACGGTCGATGAGGTAA+CGG 0.605798 7_3:+51869853 None:intergenic
GGCCGAGTTCACGGTCGATG+AGG 0.613704 7_3:+51869847 None:intergenic
GGTTGCGAGGACGATTGTGG+AGG 0.629825 7_3:-51869538 Msa1108700:CDS
GCGAACATCATCAACATCAA+CGG 0.645212 7_3:+51869731 None:intergenic
AATCGTCCTCGCAACCGCCG+CGG 0.659715 7_3:+51869545 None:intergenic
TTATACGGAGAGAGCAGCCG+CGG 0.660929 7_3:-51869562 Msa1108700:CDS
TACGGAGAGAGCAGCCGCGG+CGG 0.670249 7_3:-51869559 Msa1108700:CDS
CCAAAATCAATAGCTTTCAG+CGG 0.676537 7_3:+51869429 None:intergenic
AACATCATCAACATCAACGG+CGG 0.724157 7_3:+51869734 None:intergenic
AGGTTACACCGAATTCGCCG+CGG 0.735142 7_3:+51869826 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
TAATGCTGTTCATCTTGTTA+TGG - chr7_3:51869706-51869725 Msa1108700:CDS 30.0%
! TTTCTTGTTTGCGAATAAGA+AGG - chr7_3:51869880-51869899 Msa1108700:CDS 30.0%
TTGTCTATATTCTTTAAGCC+AGG - chr7_3:51869935-51869954 Msa1108700:CDS 30.0%
TATATTCTTTAAGCCAGGTA+TGG - chr7_3:51869940-51869959 Msa1108700:CDS 30.0%
TTCGCAAACAAGAAATTCTC+CGG + chr7_3:51869875-51869894 None:intergenic 35.0%
CCAAAATCAATAGCTTTCAG+CGG + chr7_3:51869914-51869933 None:intergenic 35.0%
!!! CGCTGAAAGCTATTGATTTT+GGG - chr7_3:51869912-51869931 Msa1108700:CDS 35.0%
AACTGAATCTTAGGTGTAGT+GGG - chr7_3:51869963-51869982 Msa1108700:CDS 35.0%
TTATGTGTAGTGAGTGTGTT+TGG - chr7_3:51870002-51870021 Msa1108700:CDS 35.0%
AACATCATCAACATCAACGG+CGG + chr7_3:51869609-51869628 None:intergenic 40.0%
GCGAACATCATCAACATCAA+CGG + chr7_3:51869612-51869631 None:intergenic 40.0%
TACTCGAACTCTTAGGCAAA+TGG + chr7_3:51869655-51869674 None:intergenic 40.0%
GTCACAATACTCGAACTCTT+AGG + chr7_3:51869662-51869681 None:intergenic 40.0%
! CTTGTTATGGAGCTTTGTGA+AGG - chr7_3:51869719-51869738 Msa1108700:CDS 40.0%
! TTATGGAGCTTTGTGAAGGT+GGG - chr7_3:51869723-51869742 Msa1108700:CDS 40.0%
TTTGATCGGATTGTTGCTAG+AGG - chr7_3:51869752-51869771 Msa1108700:CDS 40.0%
TTGATCGGATTGTTGCTAGA+GGG - chr7_3:51869753-51869772 Msa1108700:CDS 40.0%
!! TGTTGCTAGAGGGCATTATA+CGG - chr7_3:51869763-51869782 Msa1108700:CDS 40.0%
GTGCAACTTTGTCATAAGCA+TGG - chr7_3:51869827-51869846 Msa1108700:CDS 40.0%
!!! CCGCTGAAAGCTATTGATTT+TGG - chr7_3:51869911-51869930 Msa1108700:CDS 40.0%
CTAAGATTCAGTTCCATACC+TGG + chr7_3:51869956-51869975 None:intergenic 40.0%
CAGGTATGGAACTGAATCTT+AGG - chr7_3:51869954-51869973 Msa1108700:CDS 40.0%
GAACTGAATCTTAGGTGTAG+TGG - chr7_3:51869962-51869981 Msa1108700:CDS 40.0%
TGGTTTCAGTTCGTTTAGGG+TGG + chr7_3:51869400-51869419 None:intergenic 45.0%
CGGTGGTTTCAGTTCGTTTA+GGG + chr7_3:51869403-51869422 None:intergenic 45.0%
! TTCCATGTTGTCGGAGGTTT+TGG + chr7_3:51869465-51869484 None:intergenic 45.0%
GTAACGGTCTTCCATGTTGT+CGG + chr7_3:51869474-51869493 None:intergenic 45.0%
!! CCTGCAAAAGCATCTCCAAA+CGG - chr7_3:51869573-51869592 Msa1108700:CDS 45.0%
! GTTATGGAGCTTTGTGAAGG+TGG - chr7_3:51869722-51869741 Msa1108700:CDS 45.0%
! TATGGAGCTTTGTGAAGGTG+GGG - chr7_3:51869724-51869743 Msa1108700:CDS 45.0%
! AAGGTGGGGAGCTTTTTGAT+CGG - chr7_3:51869738-51869757 Msa1108700:CDS 45.0%
GATTCATCGCGATCTTAAGC+CGG - chr7_3:51869853-51869872 Msa1108700:CDS 45.0%
TTTGACATCTTCGCGTGCGA+CGG + chr7_3:51869357-51869376 None:intergenic 50.0%
GCGGTGGTTTCAGTTCGTTT+AGG + chr7_3:51869404-51869423 None:intergenic 50.0%
!!! TGGGGTTTTTTTGTTGGCGG+TGG + chr7_3:51869420-51869439 None:intergenic 50.0%
!!! CGGTGGGGTTTTTTTGTTGG+CGG + chr7_3:51869423-51869442 None:intergenic 50.0%
CGCCAACAAAAAAACCCCAC+CGG - chr7_3:51869421-51869440 Msa1108700:CDS 50.0%
!!! GACCGGTGGGGTTTTTTTGT+TGG + chr7_3:51869426-51869445 None:intergenic 50.0%
!! CATGTTGTCGGAGGTTTTGG+TGG + chr7_3:51869462-51869481 None:intergenic 50.0%
CACCAAAACCTCCGACAACA+TGG - chr7_3:51869460-51869479 Msa1108700:CDS 50.0%
GTTCACGGTCGATGAGGTAA+CGG + chr7_3:51869490-51869509 None:intergenic 50.0%
TACCTCATCGACCGTGAACT+CGG - chr7_3:51869491-51869510 Msa1108700:CDS 50.0%
GTCACGGTCGATACAGAGAT+AGG + chr7_3:51869537-51869556 None:intergenic 50.0%
! CCGTTTGGAGATGCTTTTGC+AGG + chr7_3:51869576-51869595 None:intergenic 50.0%
GGCGCATGATAGCAACTTCA+CGG + chr7_3:51869634-51869653 None:intergenic 50.0%
GGGTAACTGCTGCAGATCTC+CGG - chr7_3:51869328-51869347 Msa1108700:CDS 55.0%
GTGGTCGTGGTTGGAGAAAG+AGG + chr7_3:51869381-51869400 None:intergenic 55.0%
! TCGTTTAGGGTGGTCGTGGT+TGG + chr7_3:51869390-51869409 None:intergenic 55.0%
! CAGTTCGTTTAGGGTGGTCG+TGG + chr7_3:51869394-51869413 None:intergenic 55.0%
!! GTTGTCGGAGGTTTTGGTGG+CGG + chr7_3:51869459-51869478 None:intergenic 55.0%
ACGGTCTTCCATGTTGTCGG+AGG + chr7_3:51869471-51869490 None:intergenic 55.0%
AGGTTACACCGAATTCGCCG+CGG + chr7_3:51869517-51869536 None:intergenic 55.0%
GACTCTTCGTGAAGCGTGTG+AGG - chr7_3:51869679-51869698 Msa1108700:CDS 55.0%
TTATACGGAGAGAGCAGCCG+CGG - chr7_3:51869778-51869797 Msa1108700:CDS 55.0%
CGAGTAGCTCGCGAGTGTCA+CGG + chr7_3:51869553-51869572 None:intergenic 60.0%
GGCGGTTCGTAGCTTCCGTT+TGG + chr7_3:51869591-51869610 None:intergenic 60.0%
GGTTGCGAGGACGATTGTGG+AGG - chr7_3:51869802-51869821 Msa1108700:CDS 60.0%
GACATCTTCGCGTGCGACGG+CGG + chr7_3:51869354-51869373 None:intergenic 65.0%
!!! GGTTTTGGTGGCGGCGAGGA+CGG + chr7_3:51869450-51869469 None:intergenic 65.0%
GGCCGAGTTCACGGTCGATG+AGG + chr7_3:51869496-51869515 None:intergenic 65.0%
ATCGACCGTGAACTCGGCCG+CGG - chr7_3:51869497-51869516 Msa1108700:CDS 65.0%
ATTCGCCGCGGCCGAGTTCA+CGG + chr7_3:51869505-51869524 None:intergenic 65.0%
GAACTCGGCCGCGGCGAATT+CGG - chr7_3:51869506-51869525 Msa1108700:CDS 65.0%
AATCGTCCTCGCAACCGCCG+CGG + chr7_3:51869798-51869817 None:intergenic 65.0%
GGCGGTTGCGAGGACGATTG+TGG - chr7_3:51869799-51869818 Msa1108700:CDS 65.0%
!!! CGGAGGTTTTGGTGGCGGCG+AGG + chr7_3:51869454-51869473 None:intergenic 70.0%
TACGGAGAGAGCAGCCGCGG+CGG - chr7_3:51869781-51869800 Msa1108700:CDS 70.0%
TCTTCGCGTGCGACGGCGGC+CGG + chr7_3:51869350-51869369 None:intergenic 75.0%
GGCGAGGACGGTGACCGGTG+GGG + chr7_3:51869438-51869457 None:intergenic 75.0%
CGGCGAGGACGGTGACCGGT+GGG + chr7_3:51869439-51869458 None:intergenic 75.0%
GTGGCGGCGAGGACGGTGAC+CGG + chr7_3:51869443-51869462 None:intergenic 75.0%
! GCGGCGAGGACGGTGACCGG+TGG + chr7_3:51869440-51869459 None:intergenic 80.0%
! GAGCAGCCGCGGCGGTTGCG+AGG - chr7_3:51869789-51869808 Msa1108700:CDS 80.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 51869326 51870036 51869326 ID=Msa1108700;Name=Msa1108700
chr7_3 mRNA 51869326 51870036 51869326 ID=Msa1108700-mRNA-1;Parent=Msa1108700;Name=Msa1108700-mRNA-1;_AED=0.47;_eAED=0.47;_QI=0|-1|0|1|-1|1|1|0|236
chr7_3 exon 51869326 51870036 51869326 ID=Msa1108700-mRNA-1:exon:10719;Parent=Msa1108700-mRNA-1
chr7_3 CDS 51869326 51870036 51869326 ID=Msa1108700-mRNA-1:cds;Parent=Msa1108700-mRNA-1
Gene Sequence

>Msa1108700

ATGGGTAACTGCTGCAGATCTCCGGCCGCCGTCGCACGCGAAGATGTCAAATCCTCTTTCTCCAACCACGACCACCCTAAACGAACTGAAACCACCGCCAACAAAAAAACCCCACCGGTCACCGTCCTCGCCGCCACCAAAACCTCCGACAACATGGAAGACCGTTACCTCATCGACCGTGAACTCGGCCGCGGCGAATTCGGTGTAACCTATCTCTGTATCGACCGTGACACTCGCGAGCTACTCGCCTGCAAAAGCATCTCCAAACGGAAGCTACGAACCGCCGTTGATGTTGATGATGTTCGCCGTGAAGTTGCTATCATGCGCCATTTGCCTAAGAGTTCGAGTATTGTGACTCTTCGTGAAGCGTGTGAGGATGATAATGCTGTTCATCTTGTTATGGAGCTTTGTGAAGGTGGGGAGCTTTTTGATCGGATTGTTGCTAGAGGGCATTATACGGAGAGAGCAGCCGCGGCGGTTGCGAGGACGATTGTGGAGGTTGTGCAACTTTGTCATAAGCATGGAGTGATTCATCGCGATCTTAAGCCGGAGAATTTCTTGTTTGCGAATAAGAAGGAGAATTCGCCGCTGAAAGCTATTGATTTTGGGTTGTCTATATTCTTTAAGCCAGGTATGGAACTGAATCTTAGGTGTAGTGGGAGTGATTATTTGAGTTTTATGTGTAGTGAGTGTGTTTGGTTTGAAATTTGA
Protein sequence

>Msa1108700

MGNCCRSPAAVAREDVKSSFSNHDHPKRTETTANKKTPPVTVLAATKTSDNMEDRYLIDRELGRGEFGVTYLCIDRDTRELLACKSISKRKLRTAVDVDDVRREVAIMRHLPKSSSIVTLREACEDDNAVHLVMELCEGGELFDRIVARGHYTERAAAAVARTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGMELNLRCSGSDYLSFMCSECVWFEI*