Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109160 | XP_003623338.1 | 91.327 | 588 | 47 | 2 | 1 | 587 | 1 | 585 | 0.0 | 1100 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109160 | sp|Q2PEG7|NSP2_LOTJA | 26.368 | 402 | 239 | 18 | 217 | 585 | 113 | 490 | 4.86e-18 | 90.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109160 | G7KSD5 | 91.327 | 588 | 47 | 2 | 1 | 587 | 1 | 585 | 0.0 | 1100 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1109160 | TF | GRAS |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109160 | MtrunA17_Chr7g0243151 | 91.327 | 588 | 47 | 2 | 1 | 587 | 1 | 585 | 0.0 | 1100 |
| Msa1109160 | MtrunA17_Chr3g0114841 | 27.653 | 311 | 197 | 11 | 285 | 585 | 207 | 499 | 6.47e-18 | 87.0 |
| Msa1109160 | MtrunA17_Chr5g0424131 | 26.368 | 402 | 244 | 15 | 217 | 585 | 116 | 498 | 2.68e-17 | 85.1 |
| Msa1109160 | MtrunA17_Chr7g0224271 | 25.799 | 438 | 233 | 21 | 201 | 586 | 276 | 673 | 7.71e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109160 | AT1G07520.1 | 23.645 | 406 | 247 | 16 | 217 | 585 | 313 | 692 | 2.61e-12 | 70.1 |
| Msa1109160 | AT1G07520.3 | 23.645 | 406 | 247 | 16 | 217 | 585 | 314 | 693 | 2.85e-12 | 70.1 |
| Msa1109160 | AT1G07520.2 | 23.645 | 406 | 247 | 16 | 217 | 585 | 149 | 528 | 1.32e-11 | 67.8 |
| Msa1109160 | AT1G07520.4 | 23.645 | 406 | 247 | 16 | 217 | 585 | 149 | 528 | 1.32e-11 | 67.8 |
Find 95 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAATTGACATCAATTAAA+TGG | 0.189338 | 7_3:+52576056 | Msa1109160:CDS |
| CACATAATTGATTATTGTTT+TGG | 0.189427 | 7_3:+52575977 | Msa1109160:CDS |
| ACCAATTTGTGGACTCAAAA+TGG | 0.208342 | 7_3:-52575384 | None:intergenic |
| TTTCTTCATCAATTGGAAAT+TGG | 0.210829 | 7_3:-52575319 | None:intergenic |
| TACTTTGCCACAAGAAAATA+TGG | 0.244532 | 7_3:+52575628 | Msa1109160:CDS |
| AAATGAGAATCAACTTGTTT+TGG | 0.251878 | 7_3:+52576711 | Msa1109160:CDS |
| AACTCCCTTCACTTTCTTCT+TGG | 0.260798 | 7_3:-52575427 | None:intergenic |
| CAATTTCAAACCACATGATT+TGG | 0.267276 | 7_3:-52576143 | None:intergenic |
| CTTGTATATCTTCTCTTGAT+TGG | 0.318337 | 7_3:+52576539 | Msa1109160:CDS |
| GATATGATCATTGGTGAATA+TGG | 0.332452 | 7_3:-52575297 | None:intergenic |
| TCCAAGGTTTCTTCATCAAT+TGG | 0.335882 | 7_3:-52575326 | None:intergenic |
| GATGACCGATCTTCCTCATA+TGG | 0.340403 | 7_3:+52576258 | Msa1109160:CDS |
| TCTATGTGTTCATAGATTAA+AGG | 0.348224 | 7_3:-52575050 | None:intergenic |
| ATACTCATAAAGTTCCCTTT+TGG | 0.349243 | 7_3:-52576119 | None:intergenic |
| CTTGGAACTTCCATCTCTAA+TGG | 0.352756 | 7_3:+52575343 | Msa1109160:CDS |
| ATGAAAATTCTGCATCTGTT+TGG | 0.356641 | 7_3:+52576083 | Msa1109160:CDS |
| AAAGATGAGATTAGCATAGA+AGG | 0.374138 | 7_3:+52576601 | Msa1109160:CDS |
| GTTGCATTATAAAGCTTTGT+TGG | 0.380439 | 7_3:+52576444 | Msa1109160:CDS |
| TCTTGTATGCCTCGCCTTTG+AGG | 0.385451 | 7_3:-52575838 | None:intergenic |
| CCTCGGAGACAGTTGTAAAA+TGG | 0.387068 | 7_3:+52575499 | Msa1109160:CDS |
| AGGAAGGGAATTGTTACTTT+TGG | 0.387523 | 7_3:+52576355 | Msa1109160:CDS |
| AGTGAGTCTTCCACACTTGA+TGG | 0.390562 | 7_3:+52575664 | Msa1109160:CDS |
| GAAGGTAGAGGAAAAGGAAT+TGG | 0.405087 | 7_3:+52576165 | Msa1109160:CDS |
| GAAATTGAAGGTAGAGGAAA+AGG | 0.406350 | 7_3:+52576159 | Msa1109160:CDS |
| TCTTGAATATTACCAATTTG+TGG | 0.407532 | 7_3:-52575395 | None:intergenic |
| CTCTTGATTGGTTACAAACA+TGG | 0.411194 | 7_3:+52576551 | Msa1109160:CDS |
| TGAGACACTTGCATATTACT+TGG | 0.425483 | 7_3:+52575787 | Msa1109160:CDS |
| TTTATCAAGGGAATTTGGTT+GGG | 0.433000 | 7_3:+52575885 | Msa1109160:CDS |
| TCAACCATGGTGAAGCTATA+CGG | 0.433516 | 7_3:-52575116 | None:intergenic |
| ATTTGATCAAGAACTATTGT+AGG | 0.434003 | 7_3:+52576335 | Msa1109160:CDS |
| TCCAATTGATGAAGAAACCT+TGG | 0.445970 | 7_3:+52575325 | Msa1109160:CDS |
| GAAACAGTCTCCAATAGAAA+AGG | 0.449571 | 7_3:-52576016 | None:intergenic |
| TGGAAATTGGATATGATCAT+TGG | 0.449728 | 7_3:-52575306 | None:intergenic |
| GATCAAAATAATGAACGAAA+AGG | 0.458900 | 7_3:+52576204 | Msa1109160:CDS |
| TCATATCAAGCAAGAATTGA+AGG | 0.470729 | 7_3:+52576685 | Msa1109160:CDS |
| TGCATCTGTTTGGAATTTCG+AGG | 0.475745 | 7_3:+52576093 | Msa1109160:CDS |
| ATGACCGATCTTCCTCATAT+GGG | 0.477572 | 7_3:+52576259 | Msa1109160:CDS |
| CTTCTAACCATTCCCATATG+AGG | 0.492028 | 7_3:-52576271 | None:intergenic |
| ATCAAAATAATGAACGAAAA+GGG | 0.498103 | 7_3:+52576205 | Msa1109160:CDS |
| TCTGATTTCATGGAAAGTGT+TGG | 0.499305 | 7_3:-52575581 | None:intergenic |
| GGAATTTCGAGGATACCAAA+AGG | 0.507394 | 7_3:+52576104 | Msa1109160:CDS |
| TCATCCATGATGATGCCATA+TGG | 0.508726 | 7_3:-52575158 | None:intergenic |
| TCATCCATGATGATGCCATA+TGG | 0.509020 | 7_3:-52575203 | None:intergenic |
| CATTAGAGATGGAAGTTCCA+AGG | 0.509956 | 7_3:-52575342 | None:intergenic |
| ATCATGTGGTTTGAAATTGA+AGG | 0.512511 | 7_3:+52576147 | Msa1109160:CDS |
| ATCAAGAACTATTGTAGGAA+GGG | 0.515195 | 7_3:+52576340 | Msa1109160:CDS |
| GCTCAAGTAGTGACAAATCA+TGG | 0.515932 | 7_3:+52575809 | Msa1109160:CDS |
| CATGGTGAAGCCTTGGAGAA+AGG | 0.516575 | 7_3:+52575692 | Msa1109160:CDS |
| AAAATTCTCCCTGTGGTGCA+TGG | 0.518660 | 7_3:+52575555 | Msa1109160:CDS |
| GAGAGTACTATTCTCTGAAG+TGG | 0.519133 | 7_3:-52575264 | None:intergenic |
| GTCTCAAGAGAGTCACCAAT+AGG | 0.521912 | 7_3:-52575770 | None:intergenic |
| GATCAAGAACTATTGTAGGA+AGG | 0.523430 | 7_3:+52576339 | Msa1109160:CDS |
| GGAAGCACATGGTGAAGCCT+TGG | 0.523810 | 7_3:+52575685 | Msa1109160:CDS |
| TGGTTTGAAATTGAAGGTAG+AGG | 0.525487 | 7_3:+52576153 | Msa1109160:CDS |
| GATGATGACTATGTTCCATA+TGG | 0.526351 | 7_3:+52575188 | Msa1109160:CDS |
| GATTCTAATTCCATTAGAGA+TGG | 0.530035 | 7_3:-52575353 | None:intergenic |
| GTTGATGACTATGATCCATA+TGG | 0.530988 | 7_3:+52575143 | Msa1109160:CDS |
| GAATTTCGAGGATACCAAAA+GGG | 0.531446 | 7_3:+52576105 | Msa1109160:CDS |
| AACAGATTCTTCACTCTCCA+TGG | 0.536819 | 7_3:+52575027 | Msa1109160:CDS |
| GATGAGATTAGCATAGAAGG+TGG | 0.537000 | 7_3:+52576604 | Msa1109160:CDS |
| TGTTGGACTCCATGCACCAC+AGG | 0.537815 | 7_3:-52575564 | None:intergenic |
| CGATCTTCCTCATATGGGAA+TGG | 0.548107 | 7_3:+52576264 | Msa1109160:CDS |
| CCTTCACAAAATTCTCCCTG+TGG | 0.548533 | 7_3:+52575548 | Msa1109160:CDS |
| GATTTGAACTATACCCTTCG+AGG | 0.553155 | 7_3:-52575475 | None:intergenic |
| TGTTCATAGATTAAAGGCCA+TGG | 0.555928 | 7_3:-52575044 | None:intergenic |
| GAAATGATCATAAGTGGCAC+TGG | 0.557550 | 7_3:-52575525 | None:intergenic |
| TGAAGGGAAATGATCATAAG+TGG | 0.559314 | 7_3:-52575531 | None:intergenic |
| TGATCCATATGGCATCATCA+TGG | 0.565829 | 7_3:+52575154 | Msa1109160:CDS |
| TGTTCCATATGGCATCATCA+TGG | 0.566239 | 7_3:+52575199 | Msa1109160:CDS |
| CATTCCCATATGAGGAAGAT+CGG | 0.567563 | 7_3:-52576263 | None:intergenic |
| CTATACCCTTCGAGGTCATG+TGG | 0.569181 | 7_3:-52575467 | None:intergenic |
| TCTTGATTGGTTACAAACAT+GGG | 0.569487 | 7_3:+52576552 | Msa1109160:CDS |
| ATTGACATCAATTAAATGGA+GGG | 0.571443 | 7_3:+52576060 | Msa1109160:CDS |
| AATTGACATCAATTAAATGG+AGG | 0.573165 | 7_3:+52576059 | Msa1109160:CDS |
| TGAGTGTGAAGTGTTGTTTG+TGG | 0.576764 | 7_3:+52576513 | Msa1109160:CDS |
| TCAAGTGTGGAAGACTCACT+TGG | 0.579458 | 7_3:-52575661 | None:intergenic |
| TATGAGTATGCCAAATCATG+TGG | 0.582299 | 7_3:+52576133 | Msa1109160:CDS |
| CAATCAAGAGAAGATATACA+AGG | 0.583066 | 7_3:-52576538 | None:intergenic |
| GAAGTCAGAGAAATGTTGAG+AGG | 0.583320 | 7_3:+52576652 | Msa1109160:CDS |
| TGGGAAGAGATGAAAAGTGA+TGG | 0.606712 | 7_3:+52576571 | Msa1109160:CDS |
| GAATACCAAGAAGAAAGTGA+AGG | 0.607663 | 7_3:+52575422 | Msa1109160:CDS |
| AATACCAAGAAGAAAGTGAA+GGG | 0.608570 | 7_3:+52575423 | Msa1109160:CDS |
| AATCATGGAGATTACCTCAA+AGG | 0.616214 | 7_3:+52575824 | Msa1109160:CDS |
| CCATGTGCTTCCATCAAGTG+TGG | 0.618160 | 7_3:-52575674 | None:intergenic |
| ATGATCATAAGTGGCACTGG+CGG | 0.631598 | 7_3:-52575522 | None:intergenic |
| GTCATCAACATGGTCAACCA+TGG | 0.639550 | 7_3:-52575129 | None:intergenic |
| GGGTATAGTTCAAATCCCCT+CGG | 0.648026 | 7_3:+52575482 | Msa1109160:CDS |
| CCACACTTGATGGAAGCACA+TGG | 0.654957 | 7_3:+52575674 | Msa1109160:CDS |
| AAGAGAGTCACCAATAGGAG+TGG | 0.663623 | 7_3:-52575765 | None:intergenic |
| GTTGGACTCCATGCACCACA+GGG | 0.676745 | 7_3:-52575563 | None:intergenic |
| AAAATAATGAACGAAAAGGG+CGG | 0.679821 | 7_3:+52576208 | Msa1109160:CDS |
| TGGAGATTACCTCAAAGGCG+AGG | 0.686092 | 7_3:+52575829 | Msa1109160:CDS |
| GAACATAGTCATCATCAACA+TGG | 0.707488 | 7_3:-52575181 | None:intergenic |
| ATGGATCATAGTCATCAACA+TGG | 0.710348 | 7_3:-52575139 | None:intergenic |
| TGAGCCGTATAGCTTCACCA+TGG | 0.712624 | 7_3:+52575112 | Msa1109160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATAGTTTGAATTTCA+AGG | + | chr7_3:52576402-52576421 | Msa1109160:CDS | 15.0% |
| !! | TAAAAATAGTTTGAATTTCA+AGG | + | chr7_3:52576402-52576421 | Msa1109160:CDS | 15.0% |
| !!! | CACATAATTGATTATTGTTT+TGG | + | chr7_3:52575977-52575996 | Msa1109160:CDS | 20.0% |
| !!! | ATTGATTATTGTTTTGGAAA+TGG | + | chr7_3:52575983-52576002 | Msa1109160:CDS | 20.0% |
| !! | TGAAATTGACATCAATTAAA+TGG | + | chr7_3:52576056-52576075 | Msa1109160:CDS | 20.0% |
| !! | ATCAAAATAATGAACGAAAA+GGG | + | chr7_3:52576205-52576224 | Msa1109160:CDS | 20.0% |
| !!! | AACTGTTAAGATTTTCTATT+TGG | + | chr7_3:52576749-52576768 | Msa1109160:CDS | 20.0% |
| !!! | CACATAATTGATTATTGTTT+TGG | + | chr7_3:52575977-52575996 | Msa1109160:CDS | 20.0% |
| !!! | ATTGATTATTGTTTTGGAAA+TGG | + | chr7_3:52575983-52576002 | Msa1109160:CDS | 20.0% |
| !! | TGAAATTGACATCAATTAAA+TGG | + | chr7_3:52576056-52576075 | Msa1109160:CDS | 20.0% |
| !! | ATCAAAATAATGAACGAAAA+GGG | + | chr7_3:52576205-52576224 | Msa1109160:CDS | 20.0% |
| !!! | AACTGTTAAGATTTTCTATT+TGG | + | chr7_3:52576749-52576768 | Msa1109160:CDS | 20.0% |
| ! | TCTATGTGTTCATAGATTAA+AGG | - | chr7_3:52575053-52575072 | None:intergenic | 25.0% |
| ! | TTTCTTCATCAATTGGAAAT+TGG | - | chr7_3:52575322-52575341 | None:intergenic | 25.0% |
| ! | TCTTGAATATTACCAATTTG+TGG | - | chr7_3:52575398-52575417 | None:intergenic | 25.0% |
| ! | TGATGAAAAATCTGATTTCA+TGG | - | chr7_3:52575594-52575613 | None:intergenic | 25.0% |
| !! | TCAATTTCCATATTTTCTTG+TGG | - | chr7_3:52575638-52575657 | None:intergenic | 25.0% |
| !!! | CTTTTCAGGTATTTTATCAA+GGG | + | chr7_3:52575873-52575892 | Msa1109160:CDS | 25.0% |
| ! | AATTGACATCAATTAAATGG+AGG | + | chr7_3:52576059-52576078 | Msa1109160:CDS | 25.0% |
| ! | ATTGACATCAATTAAATGGA+GGG | + | chr7_3:52576060-52576079 | Msa1109160:CDS | 25.0% |
| ! | GATCAAAATAATGAACGAAA+AGG | + | chr7_3:52576204-52576223 | Msa1109160:CDS | 25.0% |
| ! | ATTTGATCAAGAACTATTGT+AGG | + | chr7_3:52576335-52576354 | Msa1109160:CDS | 25.0% |
| !!! | AATTTCAAGGCATTTTTTGA+AGG | + | chr7_3:52576415-52576434 | Msa1109160:CDS | 25.0% |
| !!! | ATTTCAAGGCATTTTTTGAA+GGG | + | chr7_3:52576416-52576435 | Msa1109160:CDS | 25.0% |
| !!! | ATTGAGCAAAAATGTTTTGA+TGG | + | chr7_3:52576630-52576649 | Msa1109160:CDS | 25.0% |
| !!! | AAATGAGAATCAACTTGTTT+TGG | + | chr7_3:52576711-52576730 | Msa1109160:CDS | 25.0% |
| ! | TCTATGTGTTCATAGATTAA+AGG | - | chr7_3:52575053-52575072 | None:intergenic | 25.0% |
| ! | TTTCTTCATCAATTGGAAAT+TGG | - | chr7_3:52575322-52575341 | None:intergenic | 25.0% |
| ! | TCTTGAATATTACCAATTTG+TGG | - | chr7_3:52575398-52575417 | None:intergenic | 25.0% |
| ! | TGATGAAAAATCTGATTTCA+TGG | - | chr7_3:52575594-52575613 | None:intergenic | 25.0% |
| !! | TCAATTTCCATATTTTCTTG+TGG | - | chr7_3:52575638-52575657 | None:intergenic | 25.0% |
| !!! | CTTTTCAGGTATTTTATCAA+GGG | + | chr7_3:52575873-52575892 | Msa1109160:CDS | 25.0% |
| ! | AATTGACATCAATTAAATGG+AGG | + | chr7_3:52576059-52576078 | Msa1109160:CDS | 25.0% |
| ! | ATTGACATCAATTAAATGGA+GGG | + | chr7_3:52576060-52576079 | Msa1109160:CDS | 25.0% |
| ! | GATCAAAATAATGAACGAAA+AGG | + | chr7_3:52576204-52576223 | Msa1109160:CDS | 25.0% |
| ! | ATTTGATCAAGAACTATTGT+AGG | + | chr7_3:52576335-52576354 | Msa1109160:CDS | 25.0% |
| !!! | AATTTCAAGGCATTTTTTGA+AGG | + | chr7_3:52576415-52576434 | Msa1109160:CDS | 25.0% |
| !!! | ATTTCAAGGCATTTTTTGAA+GGG | + | chr7_3:52576416-52576435 | Msa1109160:CDS | 25.0% |
| !!! | ATTGAGCAAAAATGTTTTGA+TGG | + | chr7_3:52576630-52576649 | Msa1109160:CDS | 25.0% |
| !!! | AAATGAGAATCAACTTGTTT+TGG | + | chr7_3:52576711-52576730 | Msa1109160:CDS | 25.0% |
| ! | ATGATGATGATGATGATCAA+AGG | - | chr7_3:52575084-52575103 | None:intergenic | 30.0% |
| GATATGATCATTGGTGAATA+TGG | - | chr7_3:52575300-52575319 | None:intergenic | 30.0% | |
| TGGAAATTGGATATGATCAT+TGG | - | chr7_3:52575309-52575328 | None:intergenic | 30.0% | |
| GATTCTAATTCCATTAGAGA+TGG | - | chr7_3:52575356-52575375 | None:intergenic | 30.0% | |
| AATACCAAGAAGAAAGTGAA+GGG | + | chr7_3:52575423-52575442 | Msa1109160:CDS | 30.0% | |
| ! | CATGTGGAAAATTTTGTGAA+GGG | - | chr7_3:52575454-52575473 | None:intergenic | 30.0% |
| ! | TCATGTGGAAAATTTTGTGA+AGG | - | chr7_3:52575455-52575474 | None:intergenic | 30.0% |
| TACTTTGCCACAAGAAAATA+TGG | + | chr7_3:52575628-52575647 | Msa1109160:CDS | 30.0% | |
| !!! | GCTTTTCAGGTATTTTATCA+AGG | + | chr7_3:52575872-52575891 | Msa1109160:CDS | 30.0% |
| ! | GGTATTTTATCAAGGGAATT+TGG | + | chr7_3:52575880-52575899 | Msa1109160:CDS | 30.0% |
| ! | TTTTATCAAGGGAATTTGGT+TGG | + | chr7_3:52575884-52575903 | Msa1109160:CDS | 30.0% |
| TTTATCAAGGGAATTTGGTT+GGG | + | chr7_3:52575885-52575904 | Msa1109160:CDS | 30.0% | |
| ATGAAAATTCTGCATCTGTT+TGG | + | chr7_3:52576083-52576102 | Msa1109160:CDS | 30.0% | |
| ! | ATACTCATAAAGTTCCCTTT+TGG | - | chr7_3:52576122-52576141 | None:intergenic | 30.0% |
| CAATTTCAAACCACATGATT+TGG | - | chr7_3:52576146-52576165 | None:intergenic | 30.0% | |
| ! | ATCATGTGGTTTGAAATTGA+AGG | + | chr7_3:52576147-52576166 | Msa1109160:CDS | 30.0% |
| AAAATAATGAACGAAAAGGG+CGG | + | chr7_3:52576208-52576227 | Msa1109160:CDS | 30.0% | |
| ! | ACATGCTTATGAGTTTTTGA+AGG | + | chr7_3:52576303-52576322 | Msa1109160:CDS | 30.0% |
| ATCAAGAACTATTGTAGGAA+GGG | + | chr7_3:52576340-52576359 | Msa1109160:CDS | 30.0% | |
| ! | GTTGCATTATAAAGCTTTGT+TGG | + | chr7_3:52576444-52576463 | Msa1109160:CDS | 30.0% |
| CAATCAAGAGAAGATATACA+AGG | - | chr7_3:52576541-52576560 | None:intergenic | 30.0% | |
| CTTGTATATCTTCTCTTGAT+TGG | + | chr7_3:52576539-52576558 | Msa1109160:CDS | 30.0% | |
| ! | TCTTGATTGGTTACAAACAT+GGG | + | chr7_3:52576552-52576571 | Msa1109160:CDS | 30.0% |
| AAAGATGAGATTAGCATAGA+AGG | + | chr7_3:52576601-52576620 | Msa1109160:CDS | 30.0% | |
| TCATATCAAGCAAGAATTGA+AGG | + | chr7_3:52576685-52576704 | Msa1109160:CDS | 30.0% | |
| !!! | AGAATCAACTTGTTTTGGAA+TGG | + | chr7_3:52576716-52576735 | Msa1109160:CDS | 30.0% |
| ! | ATGATGATGATGATGATCAA+AGG | - | chr7_3:52575084-52575103 | None:intergenic | 30.0% |
| GATATGATCATTGGTGAATA+TGG | - | chr7_3:52575300-52575319 | None:intergenic | 30.0% | |
| TGGAAATTGGATATGATCAT+TGG | - | chr7_3:52575309-52575328 | None:intergenic | 30.0% | |
| GATTCTAATTCCATTAGAGA+TGG | - | chr7_3:52575356-52575375 | None:intergenic | 30.0% | |
| AATACCAAGAAGAAAGTGAA+GGG | + | chr7_3:52575423-52575442 | Msa1109160:CDS | 30.0% | |
| ! | CATGTGGAAAATTTTGTGAA+GGG | - | chr7_3:52575454-52575473 | None:intergenic | 30.0% |
| ! | TCATGTGGAAAATTTTGTGA+AGG | - | chr7_3:52575455-52575474 | None:intergenic | 30.0% |
| TACTTTGCCACAAGAAAATA+TGG | + | chr7_3:52575628-52575647 | Msa1109160:CDS | 30.0% | |
| !!! | GCTTTTCAGGTATTTTATCA+AGG | + | chr7_3:52575872-52575891 | Msa1109160:CDS | 30.0% |
| ! | GGTATTTTATCAAGGGAATT+TGG | + | chr7_3:52575880-52575899 | Msa1109160:CDS | 30.0% |
| ! | TTTTATCAAGGGAATTTGGT+TGG | + | chr7_3:52575884-52575903 | Msa1109160:CDS | 30.0% |
| TTTATCAAGGGAATTTGGTT+GGG | + | chr7_3:52575885-52575904 | Msa1109160:CDS | 30.0% | |
| ATGAAAATTCTGCATCTGTT+TGG | + | chr7_3:52576083-52576102 | Msa1109160:CDS | 30.0% | |
| ! | ATACTCATAAAGTTCCCTTT+TGG | - | chr7_3:52576122-52576141 | None:intergenic | 30.0% |
| CAATTTCAAACCACATGATT+TGG | - | chr7_3:52576146-52576165 | None:intergenic | 30.0% | |
| ! | ATCATGTGGTTTGAAATTGA+AGG | + | chr7_3:52576147-52576166 | Msa1109160:CDS | 30.0% |
| AAAATAATGAACGAAAAGGG+CGG | + | chr7_3:52576208-52576227 | Msa1109160:CDS | 30.0% | |
| ! | ACATGCTTATGAGTTTTTGA+AGG | + | chr7_3:52576303-52576322 | Msa1109160:CDS | 30.0% |
| ATCAAGAACTATTGTAGGAA+GGG | + | chr7_3:52576340-52576359 | Msa1109160:CDS | 30.0% | |
| ! | GTTGCATTATAAAGCTTTGT+TGG | + | chr7_3:52576444-52576463 | Msa1109160:CDS | 30.0% |
| CAATCAAGAGAAGATATACA+AGG | - | chr7_3:52576541-52576560 | None:intergenic | 30.0% | |
| CTTGTATATCTTCTCTTGAT+TGG | + | chr7_3:52576539-52576558 | Msa1109160:CDS | 30.0% | |
| ! | TCTTGATTGGTTACAAACAT+GGG | + | chr7_3:52576552-52576571 | Msa1109160:CDS | 30.0% |
| AAAGATGAGATTAGCATAGA+AGG | + | chr7_3:52576601-52576620 | Msa1109160:CDS | 30.0% | |
| TCATATCAAGCAAGAATTGA+AGG | + | chr7_3:52576685-52576704 | Msa1109160:CDS | 30.0% | |
| !!! | AGAATCAACTTGTTTTGGAA+TGG | + | chr7_3:52576716-52576735 | Msa1109160:CDS | 30.0% |
| TGTTCATAGATTAAAGGCCA+TGG | - | chr7_3:52575047-52575066 | None:intergenic | 35.0% | |
| ATGGATCATAGTCATCAACA+TGG | - | chr7_3:52575142-52575161 | None:intergenic | 35.0% | |
| !! | GTTGATGACTATGATCCATA+TGG | + | chr7_3:52575143-52575162 | Msa1109160:CDS | 35.0% |
| GAACATAGTCATCATCAACA+TGG | - | chr7_3:52575184-52575203 | None:intergenic | 35.0% | |
| GATGATGACTATGTTCCATA+TGG | + | chr7_3:52575188-52575207 | Msa1109160:CDS | 35.0% | |
| TCCAATTGATGAAGAAACCT+TGG | + | chr7_3:52575325-52575344 | Msa1109160:CDS | 35.0% | |
| TCCAAGGTTTCTTCATCAAT+TGG | - | chr7_3:52575329-52575348 | None:intergenic | 35.0% | |
| !! | TCCATTTTGAGTCCACAAAT+TGG | + | chr7_3:52575383-52575402 | Msa1109160:CDS | 35.0% |
| ACCAATTTGTGGACTCAAAA+TGG | - | chr7_3:52575387-52575406 | None:intergenic | 35.0% | |
| GAATACCAAGAAGAAAGTGA+AGG | + | chr7_3:52575422-52575441 | Msa1109160:CDS | 35.0% | |
| TGAAGGGAAATGATCATAAG+TGG | - | chr7_3:52575534-52575553 | None:intergenic | 35.0% | |
| ! | TCTGATTTCATGGAAAGTGT+TGG | - | chr7_3:52575584-52575603 | None:intergenic | 35.0% |
| TGAGACACTTGCATATTACT+TGG | + | chr7_3:52575787-52575806 | Msa1109160:CDS | 35.0% | |
| AATCATGGAGATTACCTCAA+AGG | + | chr7_3:52575824-52575843 | Msa1109160:CDS | 35.0% | |
| !!! | GTTTTGGAAATGGTGTTCAA+TGG | + | chr7_3:52575993-52576012 | Msa1109160:CDS | 35.0% |
| ! | TGTTCAATGGCCTTTTCTAT+TGG | + | chr7_3:52576006-52576025 | Msa1109160:CDS | 35.0% |
| GAAACAGTCTCCAATAGAAA+AGG | - | chr7_3:52576019-52576038 | None:intergenic | 35.0% | |
| GAATTTCGAGGATACCAAAA+GGG | + | chr7_3:52576105-52576124 | Msa1109160:CDS | 35.0% | |
| TATGAGTATGCCAAATCATG+TGG | + | chr7_3:52576133-52576152 | Msa1109160:CDS | 35.0% | |
| ! | TGGTTTGAAATTGAAGGTAG+AGG | + | chr7_3:52576153-52576172 | Msa1109160:CDS | 35.0% |
| GAAATTGAAGGTAGAGGAAA+AGG | + | chr7_3:52576159-52576178 | Msa1109160:CDS | 35.0% | |
| GATCAAGAACTATTGTAGGA+AGG | + | chr7_3:52576339-52576358 | Msa1109160:CDS | 35.0% | |
| !!! | AGGAAGGGAATTGTTACTTT+TGG | + | chr7_3:52576355-52576374 | Msa1109160:CDS | 35.0% |
| !!! | GGAATTGTTACTTTTGGTGA+TGG | + | chr7_3:52576361-52576380 | Msa1109160:CDS | 35.0% |
| ! | CTCTTGATTGGTTACAAACA+TGG | + | chr7_3:52576551-52576570 | Msa1109160:CDS | 35.0% |
| !!! | CAACTTGTTTTGGAATGGAA+AGG | + | chr7_3:52576721-52576740 | Msa1109160:CDS | 35.0% |
| TGTTCATAGATTAAAGGCCA+TGG | - | chr7_3:52575047-52575066 | None:intergenic | 35.0% | |
| ATGGATCATAGTCATCAACA+TGG | - | chr7_3:52575142-52575161 | None:intergenic | 35.0% | |
| !! | GTTGATGACTATGATCCATA+TGG | + | chr7_3:52575143-52575162 | Msa1109160:CDS | 35.0% |
| GAACATAGTCATCATCAACA+TGG | - | chr7_3:52575184-52575203 | None:intergenic | 35.0% | |
| GATGATGACTATGTTCCATA+TGG | + | chr7_3:52575188-52575207 | Msa1109160:CDS | 35.0% | |
| TCCAATTGATGAAGAAACCT+TGG | + | chr7_3:52575325-52575344 | Msa1109160:CDS | 35.0% | |
| TCCAAGGTTTCTTCATCAAT+TGG | - | chr7_3:52575329-52575348 | None:intergenic | 35.0% | |
| !! | TCCATTTTGAGTCCACAAAT+TGG | + | chr7_3:52575383-52575402 | Msa1109160:CDS | 35.0% |
| ACCAATTTGTGGACTCAAAA+TGG | - | chr7_3:52575387-52575406 | None:intergenic | 35.0% | |
| GAATACCAAGAAGAAAGTGA+AGG | + | chr7_3:52575422-52575441 | Msa1109160:CDS | 35.0% | |
| TGAAGGGAAATGATCATAAG+TGG | - | chr7_3:52575534-52575553 | None:intergenic | 35.0% | |
| ! | TCTGATTTCATGGAAAGTGT+TGG | - | chr7_3:52575584-52575603 | None:intergenic | 35.0% |
| TGAGACACTTGCATATTACT+TGG | + | chr7_3:52575787-52575806 | Msa1109160:CDS | 35.0% | |
| AATCATGGAGATTACCTCAA+AGG | + | chr7_3:52575824-52575843 | Msa1109160:CDS | 35.0% | |
| !!! | GTTTTGGAAATGGTGTTCAA+TGG | + | chr7_3:52575993-52576012 | Msa1109160:CDS | 35.0% |
| ! | TGTTCAATGGCCTTTTCTAT+TGG | + | chr7_3:52576006-52576025 | Msa1109160:CDS | 35.0% |
| GAAACAGTCTCCAATAGAAA+AGG | - | chr7_3:52576019-52576038 | None:intergenic | 35.0% | |
| GAATTTCGAGGATACCAAAA+GGG | + | chr7_3:52576105-52576124 | Msa1109160:CDS | 35.0% | |
| TATGAGTATGCCAAATCATG+TGG | + | chr7_3:52576133-52576152 | Msa1109160:CDS | 35.0% | |
| ! | TGGTTTGAAATTGAAGGTAG+AGG | + | chr7_3:52576153-52576172 | Msa1109160:CDS | 35.0% |
| GAAATTGAAGGTAGAGGAAA+AGG | + | chr7_3:52576159-52576178 | Msa1109160:CDS | 35.0% | |
| GATCAAGAACTATTGTAGGA+AGG | + | chr7_3:52576339-52576358 | Msa1109160:CDS | 35.0% | |
| !!! | AGGAAGGGAATTGTTACTTT+TGG | + | chr7_3:52576355-52576374 | Msa1109160:CDS | 35.0% |
| !!! | GGAATTGTTACTTTTGGTGA+TGG | + | chr7_3:52576361-52576380 | Msa1109160:CDS | 35.0% |
| ! | CTCTTGATTGGTTACAAACA+TGG | + | chr7_3:52576551-52576570 | Msa1109160:CDS | 35.0% |
| !!! | CAACTTGTTTTGGAATGGAA+AGG | + | chr7_3:52576721-52576740 | Msa1109160:CDS | 35.0% |
| AACAGATTCTTCACTCTCCA+TGG | + | chr7_3:52575027-52575046 | Msa1109160:CDS | 40.0% | |
| TCAACCATGGTGAAGCTATA+CGG | - | chr7_3:52575119-52575138 | None:intergenic | 40.0% | |
| TGATCCATATGGCATCATCA+TGG | + | chr7_3:52575154-52575173 | Msa1109160:CDS | 40.0% | |
| ! | TCATCCATGATGATGCCATA+TGG | - | chr7_3:52575161-52575180 | None:intergenic | 40.0% |
| TGTTCCATATGGCATCATCA+TGG | + | chr7_3:52575199-52575218 | Msa1109160:CDS | 40.0% | |
| ! | TCATCCATGATGATGCCATA+TGG | - | chr7_3:52575161-52575180 | None:intergenic | 40.0% |
| !! | GAGAGTACTATTCTCTGAAG+TGG | - | chr7_3:52575267-52575286 | None:intergenic | 40.0% |
| CATTAGAGATGGAAGTTCCA+AGG | - | chr7_3:52575345-52575364 | None:intergenic | 40.0% | |
| CTTGGAACTTCCATCTCTAA+TGG | + | chr7_3:52575343-52575362 | Msa1109160:CDS | 40.0% | |
| AACTCCCTTCACTTTCTTCT+TGG | - | chr7_3:52575430-52575449 | None:intergenic | 40.0% | |
| ! | AATTTTCCACATGACCTCGA+AGG | + | chr7_3:52575461-52575480 | Msa1109160:CDS | 40.0% |
| ! | ATTTTCCACATGACCTCGAA+GGG | + | chr7_3:52575462-52575481 | Msa1109160:CDS | 40.0% |
| GATTTGAACTATACCCTTCG+AGG | - | chr7_3:52575478-52575497 | None:intergenic | 40.0% | |
| ! | ATTTTACAACTGTCTCCGAG+GGG | - | chr7_3:52575500-52575519 | None:intergenic | 40.0% |
| ! | CATTTTACAACTGTCTCCGA+GGG | - | chr7_3:52575501-52575520 | None:intergenic | 40.0% |
| GAAATGATCATAAGTGGCAC+TGG | - | chr7_3:52575528-52575547 | None:intergenic | 40.0% | |
| ! | CACAGGGAGAATTTTGTGAA+GGG | - | chr7_3:52575550-52575569 | None:intergenic | 40.0% |
| !! | TGCTTTTTGTCCTTTCTCCA+AGG | - | chr7_3:52575705-52575724 | None:intergenic | 40.0% |
| ! | CAATAGGAGTGGTGACTTTT+TGG | - | chr7_3:52575757-52575776 | None:intergenic | 40.0% |
| CAAAAAGTCACCACTCCTAT+TGG | + | chr7_3:52575755-52575774 | Msa1109160:CDS | 40.0% | |
| GCTCAAGTAGTGACAAATCA+TGG | + | chr7_3:52575809-52575828 | Msa1109160:CDS | 40.0% | |
| ! | CGAGGCATACAAGATTTTTC+AGG | + | chr7_3:52575847-52575866 | Msa1109160:CDS | 40.0% |
| !!! | GATTTTTCAGGCTGCTTTTC+AGG | + | chr7_3:52575859-52575878 | Msa1109160:CDS | 40.0% |
| ! | TGCATCTGTTTGGAATTTCG+AGG | + | chr7_3:52576093-52576112 | Msa1109160:CDS | 40.0% |
| GGAATTTCGAGGATACCAAA+AGG | + | chr7_3:52576104-52576123 | Msa1109160:CDS | 40.0% | |
| GAAGGTAGAGGAAAAGGAAT+TGG | + | chr7_3:52576165-52576184 | Msa1109160:CDS | 40.0% | |
| ATGACCGATCTTCCTCATAT+GGG | + | chr7_3:52576259-52576278 | Msa1109160:CDS | 40.0% | |
| CATTCCCATATGAGGAAGAT+CGG | - | chr7_3:52576266-52576285 | None:intergenic | 40.0% | |
| CTTCTAACCATTCCCATATG+AGG | - | chr7_3:52576274-52576293 | None:intergenic | 40.0% | |
| !! | TGAGTTTTTGAAGGTAGCTG+AGG | + | chr7_3:52576312-52576331 | Msa1109160:CDS | 40.0% |
| !! | TGAGTGTGAAGTGTTGTTTG+TGG | + | chr7_3:52576513-52576532 | Msa1109160:CDS | 40.0% |
| TGGGAAGAGATGAAAAGTGA+TGG | + | chr7_3:52576571-52576590 | Msa1109160:CDS | 40.0% | |
| GATGAGATTAGCATAGAAGG+TGG | + | chr7_3:52576604-52576623 | Msa1109160:CDS | 40.0% | |
| GAAGTCAGAGAAATGTTGAG+AGG | + | chr7_3:52576652-52576671 | Msa1109160:CDS | 40.0% | |
| AACAGATTCTTCACTCTCCA+TGG | + | chr7_3:52575027-52575046 | Msa1109160:CDS | 40.0% | |
| TCAACCATGGTGAAGCTATA+CGG | - | chr7_3:52575119-52575138 | None:intergenic | 40.0% | |
| TGATCCATATGGCATCATCA+TGG | + | chr7_3:52575154-52575173 | Msa1109160:CDS | 40.0% | |
| ! | TCATCCATGATGATGCCATA+TGG | - | chr7_3:52575161-52575180 | None:intergenic | 40.0% |
| TGTTCCATATGGCATCATCA+TGG | + | chr7_3:52575199-52575218 | Msa1109160:CDS | 40.0% | |
| ! | TCATCCATGATGATGCCATA+TGG | - | chr7_3:52575161-52575180 | None:intergenic | 40.0% |
| !! | GAGAGTACTATTCTCTGAAG+TGG | - | chr7_3:52575267-52575286 | None:intergenic | 40.0% |
| CATTAGAGATGGAAGTTCCA+AGG | - | chr7_3:52575345-52575364 | None:intergenic | 40.0% | |
| CTTGGAACTTCCATCTCTAA+TGG | + | chr7_3:52575343-52575362 | Msa1109160:CDS | 40.0% | |
| AACTCCCTTCACTTTCTTCT+TGG | - | chr7_3:52575430-52575449 | None:intergenic | 40.0% | |
| ! | AATTTTCCACATGACCTCGA+AGG | + | chr7_3:52575461-52575480 | Msa1109160:CDS | 40.0% |
| ! | ATTTTCCACATGACCTCGAA+GGG | + | chr7_3:52575462-52575481 | Msa1109160:CDS | 40.0% |
| GATTTGAACTATACCCTTCG+AGG | - | chr7_3:52575478-52575497 | None:intergenic | 40.0% | |
| ! | ATTTTACAACTGTCTCCGAG+GGG | - | chr7_3:52575500-52575519 | None:intergenic | 40.0% |
| ! | CATTTTACAACTGTCTCCGA+GGG | - | chr7_3:52575501-52575520 | None:intergenic | 40.0% |
| GAAATGATCATAAGTGGCAC+TGG | - | chr7_3:52575528-52575547 | None:intergenic | 40.0% | |
| ! | CACAGGGAGAATTTTGTGAA+GGG | - | chr7_3:52575550-52575569 | None:intergenic | 40.0% |
| !! | TGCTTTTTGTCCTTTCTCCA+AGG | - | chr7_3:52575705-52575724 | None:intergenic | 40.0% |
| ! | CAATAGGAGTGGTGACTTTT+TGG | - | chr7_3:52575757-52575776 | None:intergenic | 40.0% |
| CAAAAAGTCACCACTCCTAT+TGG | + | chr7_3:52575755-52575774 | Msa1109160:CDS | 40.0% | |
| GCTCAAGTAGTGACAAATCA+TGG | + | chr7_3:52575809-52575828 | Msa1109160:CDS | 40.0% | |
| ! | CGAGGCATACAAGATTTTTC+AGG | + | chr7_3:52575847-52575866 | Msa1109160:CDS | 40.0% |
| !!! | GATTTTTCAGGCTGCTTTTC+AGG | + | chr7_3:52575859-52575878 | Msa1109160:CDS | 40.0% |
| ! | TGCATCTGTTTGGAATTTCG+AGG | + | chr7_3:52576093-52576112 | Msa1109160:CDS | 40.0% |
| GGAATTTCGAGGATACCAAA+AGG | + | chr7_3:52576104-52576123 | Msa1109160:CDS | 40.0% | |
| GAAGGTAGAGGAAAAGGAAT+TGG | + | chr7_3:52576165-52576184 | Msa1109160:CDS | 40.0% | |
| ATGACCGATCTTCCTCATAT+GGG | + | chr7_3:52576259-52576278 | Msa1109160:CDS | 40.0% | |
| CATTCCCATATGAGGAAGAT+CGG | - | chr7_3:52576266-52576285 | None:intergenic | 40.0% | |
| CTTCTAACCATTCCCATATG+AGG | - | chr7_3:52576274-52576293 | None:intergenic | 40.0% | |
| !! | TGAGTTTTTGAAGGTAGCTG+AGG | + | chr7_3:52576312-52576331 | Msa1109160:CDS | 40.0% |
| !! | TGAGTGTGAAGTGTTGTTTG+TGG | + | chr7_3:52576513-52576532 | Msa1109160:CDS | 40.0% |
| TGGGAAGAGATGAAAAGTGA+TGG | + | chr7_3:52576571-52576590 | Msa1109160:CDS | 40.0% | |
| GATGAGATTAGCATAGAAGG+TGG | + | chr7_3:52576604-52576623 | Msa1109160:CDS | 40.0% | |
| GAAGTCAGAGAAATGTTGAG+AGG | + | chr7_3:52576652-52576671 | Msa1109160:CDS | 40.0% | |
| GTCATCAACATGGTCAACCA+TGG | - | chr7_3:52575132-52575151 | None:intergenic | 45.0% | |
| GGGTATAGTTCAAATCCCCT+CGG | + | chr7_3:52575482-52575501 | Msa1109160:CDS | 45.0% | |
| ! | CCATTTTACAACTGTCTCCG+AGG | - | chr7_3:52575502-52575521 | None:intergenic | 45.0% |
| CCTCGGAGACAGTTGTAAAA+TGG | + | chr7_3:52575499-52575518 | Msa1109160:CDS | 45.0% | |
| ! | ATGATCATAAGTGGCACTGG+CGG | - | chr7_3:52575525-52575544 | None:intergenic | 45.0% |
| ! | CCACAGGGAGAATTTTGTGA+AGG | - | chr7_3:52575551-52575570 | None:intergenic | 45.0% |
| CCTTCACAAAATTCTCCCTG+TGG | + | chr7_3:52575548-52575567 | Msa1109160:CDS | 45.0% | |
| AAAATTCTCCCTGTGGTGCA+TGG | + | chr7_3:52575555-52575574 | Msa1109160:CDS | 45.0% | |
| TCAAGTGTGGAAGACTCACT+TGG | - | chr7_3:52575664-52575683 | None:intergenic | 45.0% | |
| AGTGAGTCTTCCACACTTGA+TGG | + | chr7_3:52575664-52575683 | Msa1109160:CDS | 45.0% | |
| AAGAGAGTCACCAATAGGAG+TGG | - | chr7_3:52575768-52575787 | None:intergenic | 45.0% | |
| GTCTCAAGAGAGTCACCAAT+AGG | - | chr7_3:52575773-52575792 | None:intergenic | 45.0% | |
| !!! | GGGCGGAAAGAAAGTGTTTT+TGG | + | chr7_3:52576225-52576244 | Msa1109160:CDS | 45.0% |
| GATGACCGATCTTCCTCATA+TGG | + | chr7_3:52576258-52576277 | Msa1109160:CDS | 45.0% | |
| CGATCTTCCTCATATGGGAA+TGG | + | chr7_3:52576264-52576283 | Msa1109160:CDS | 45.0% | |
| GTCATCAACATGGTCAACCA+TGG | - | chr7_3:52575132-52575151 | None:intergenic | 45.0% | |
| GGGTATAGTTCAAATCCCCT+CGG | + | chr7_3:52575482-52575501 | Msa1109160:CDS | 45.0% | |
| ! | CCATTTTACAACTGTCTCCG+AGG | - | chr7_3:52575502-52575521 | None:intergenic | 45.0% |
| CCTCGGAGACAGTTGTAAAA+TGG | + | chr7_3:52575499-52575518 | Msa1109160:CDS | 45.0% | |
| ! | ATGATCATAAGTGGCACTGG+CGG | - | chr7_3:52575525-52575544 | None:intergenic | 45.0% |
| ! | CCACAGGGAGAATTTTGTGA+AGG | - | chr7_3:52575551-52575570 | None:intergenic | 45.0% |
| CCTTCACAAAATTCTCCCTG+TGG | + | chr7_3:52575548-52575567 | Msa1109160:CDS | 45.0% | |
| AAAATTCTCCCTGTGGTGCA+TGG | + | chr7_3:52575555-52575574 | Msa1109160:CDS | 45.0% | |
| TCAAGTGTGGAAGACTCACT+TGG | - | chr7_3:52575664-52575683 | None:intergenic | 45.0% | |
| AGTGAGTCTTCCACACTTGA+TGG | + | chr7_3:52575664-52575683 | Msa1109160:CDS | 45.0% | |
| AAGAGAGTCACCAATAGGAG+TGG | - | chr7_3:52575768-52575787 | None:intergenic | 45.0% | |
| GTCTCAAGAGAGTCACCAAT+AGG | - | chr7_3:52575773-52575792 | None:intergenic | 45.0% | |
| !!! | GGGCGGAAAGAAAGTGTTTT+TGG | + | chr7_3:52576225-52576244 | Msa1109160:CDS | 45.0% |
| GATGACCGATCTTCCTCATA+TGG | + | chr7_3:52576258-52576277 | Msa1109160:CDS | 45.0% | |
| CGATCTTCCTCATATGGGAA+TGG | + | chr7_3:52576264-52576283 | Msa1109160:CDS | 45.0% | |
| TGAGCCGTATAGCTTCACCA+TGG | + | chr7_3:52575112-52575131 | Msa1109160:CDS | 50.0% | |
| CTATACCCTTCGAGGTCATG+TGG | - | chr7_3:52575470-52575489 | None:intergenic | 50.0% | |
| CCATGTGCTTCCATCAAGTG+TGG | - | chr7_3:52575677-52575696 | None:intergenic | 50.0% | |
| ! | CCACACTTGATGGAAGCACA+TGG | + | chr7_3:52575674-52575693 | Msa1109160:CDS | 50.0% |
| CATGGTGAAGCCTTGGAGAA+AGG | + | chr7_3:52575692-52575711 | Msa1109160:CDS | 50.0% | |
| TGGAGATTACCTCAAAGGCG+AGG | + | chr7_3:52575829-52575848 | Msa1109160:CDS | 50.0% | |
| TCTTGTATGCCTCGCCTTTG+AGG | - | chr7_3:52575841-52575860 | None:intergenic | 50.0% | |
| TGAGCCGTATAGCTTCACCA+TGG | + | chr7_3:52575112-52575131 | Msa1109160:CDS | 50.0% | |
| CTATACCCTTCGAGGTCATG+TGG | - | chr7_3:52575470-52575489 | None:intergenic | 50.0% | |
| CCATGTGCTTCCATCAAGTG+TGG | - | chr7_3:52575677-52575696 | None:intergenic | 50.0% | |
| ! | CCACACTTGATGGAAGCACA+TGG | + | chr7_3:52575674-52575693 | Msa1109160:CDS | 50.0% |
| CATGGTGAAGCCTTGGAGAA+AGG | + | chr7_3:52575692-52575711 | Msa1109160:CDS | 50.0% | |
| TGGAGATTACCTCAAAGGCG+AGG | + | chr7_3:52575829-52575848 | Msa1109160:CDS | 50.0% | |
| TCTTGTATGCCTCGCCTTTG+AGG | - | chr7_3:52575841-52575860 | None:intergenic | 50.0% | |
| GTTGGACTCCATGCACCACA+GGG | - | chr7_3:52575566-52575585 | None:intergenic | 55.0% | |
| TGTTGGACTCCATGCACCAC+AGG | - | chr7_3:52575567-52575586 | None:intergenic | 55.0% | |
| ! | GGAAGCACATGGTGAAGCCT+TGG | + | chr7_3:52575685-52575704 | Msa1109160:CDS | 55.0% |
| GTTGGACTCCATGCACCACA+GGG | - | chr7_3:52575566-52575585 | None:intergenic | 55.0% | |
| TGTTGGACTCCATGCACCAC+AGG | - | chr7_3:52575567-52575586 | None:intergenic | 55.0% | |
| ! | GGAAGCACATGGTGAAGCCT+TGG | + | chr7_3:52575685-52575704 | Msa1109160:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 52575017 | 52576780 | 52575017 | ID=Msa1109160;Name=Msa1109160 |
| chr7_3 | mRNA | 52575017 | 52576780 | 52575017 | ID=Msa1109160-mRNA-1;Parent=Msa1109160;Name=Msa1109160-mRNA-1;_AED=0.00;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|587 |
| chr7_3 | exon | 52575017 | 52576780 | 52575017 | ID=Msa1109160-mRNA-1:exon:11036;Parent=Msa1109160-mRNA-1 |
| chr7_3 | CDS | 52575017 | 52576780 | 52575017 | ID=Msa1109160-mRNA-1:cds;Parent=Msa1109160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
