AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1112980

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1112980 MtrunA17_Chr7g0248721 95.890 219 8 1 1 219 1 218 1.50e-157 434
Msa1112980 MtrunA17_Chr7g0224801 71.264 87 25 0 129 215 81 167 5.05e-42 140
Msa1112980 MtrunA17_Chr8g0335811 66.265 83 27 1 119 200 132 214 2.47e-35 124
Msa1112980 MtrunA17_Chr8g0386241 50.893 112 52 1 100 211 65 173 2.76e-33 118
Msa1112980 MtrunA17_Chr2g0294231 75.000 72 18 0 127 198 189 260 2.93e-32 120
Msa1112980 MtrunA17_Chr1g0194481 70.130 77 23 0 122 198 139 215 9.36e-32 117
Msa1112980 MtrunA17_Chr5g0443131 72.603 73 20 0 127 199 143 215 1.04e-30 114
Msa1112980 MtrunA17_Chr7g0270191 56.566 99 34 1 100 198 113 202 1.17e-30 114
Msa1112980 MtrunA17_Chr4g0051881 69.863 73 22 0 127 199 164 236 1.44e-30 115
Msa1112980 MtrunA17_Chr3g0129361 58.824 85 34 1 124 207 127 211 5.72e-30 110
Msa1112980 MtrunA17_Chr5g0418781 59.783 92 28 1 106 197 98 180 1.11e-29 111
Msa1112980 MtrunA17_Chr8g0383351 65.278 72 24 1 127 197 145 216 3.38e-29 108
Msa1112980 MtrunA17_Chr3g0129321 55.556 90 37 2 113 199 89 178 1.86e-28 106
Msa1112980 MtrunA17_Chr1g0150801 40.426 188 80 7 14 198 1 159 2.93e-28 104
Msa1112980 MtrunA17_Chr7g0218081 61.039 77 30 0 121 197 390 466 1.82e-27 108
Msa1112980 MtrunA17_Chr7g0218081 59.677 62 24 1 136 197 223 283 7.48e-19 84.3
Msa1112980 MtrunA17_Chr5g0418191 37.342 158 81 2 58 197 219 376 1.00e-26 106
Msa1112980 MtrunA17_Chr5g0418191 48.810 84 38 2 128 207 138 220 6.93e-18 81.3
Msa1112980 MtrunA17_Chr5g0432161 54.444 90 41 0 108 197 388 477 1.24e-26 107
Msa1112980 MtrunA17_Chr5g0432161 56.897 58 24 1 141 198 244 300 1.80e-15 74.7
Msa1112980 MtrunA17_Chr4g0042831 44.167 120 67 0 78 197 215 334 2.75e-26 104
Msa1112980 MtrunA17_Chr4g0042831 53.226 62 29 0 136 197 140 201 3.74e-16 76.3
Msa1112980 MtrunA17_Chr3g0079691 48.598 107 49 1 97 197 445 551 3.98e-26 105
Msa1112980 MtrunA17_Chr3g0079691 62.069 58 21 1 141 198 280 336 2.09e-18 83.2
Msa1112980 MtrunA17_Chr4g0068541 58.974 78 32 0 128 205 195 272 9.39e-26 103
Msa1112980 MtrunA17_Chr8g0383251 50.549 91 40 1 128 218 95 180 4.47e-25 97.1
Msa1112980 MtrunA17_Chr5g0445311 58.974 78 32 0 120 197 343 420 6.90e-25 101
Msa1112980 MtrunA17_Chr5g0445311 58.621 58 23 1 141 198 200 256 1.22e-16 78.2
Msa1112980 MtrunA17_Chr3g0101131 58.974 78 32 0 120 197 394 471 9.95e-25 101
Msa1112980 MtrunA17_Chr3g0101131 54.688 64 28 1 135 198 237 299 2.20e-17 80.1
Msa1112980 MtrunA17_Chr7g0243891 51.579 95 38 1 111 197 336 430 1.01e-24 101
Msa1112980 MtrunA17_Chr7g0243891 56.897 58 24 1 141 198 216 272 2.17e-15 74.3
Msa1112980 MtrunA17_Chr3g0106491 54.023 87 40 0 111 197 335 421 1.23e-24 100
Msa1112980 MtrunA17_Chr3g0106491 58.621 58 23 1 141 198 198 254 1.61e-15 74.7
Msa1112980 MtrunA17_Chr4g0004911 59.211 76 31 0 122 197 317 392 1.55e-24 100
Msa1112980 MtrunA17_Chr4g0004911 55.172 58 26 0 141 198 184 241 2.97e-16 77.0
Msa1112980 MtrunA17_Chr7g0249301 54.545 77 35 0 121 197 272 348 9.80e-24 97.4
Msa1112980 MtrunA17_Chr7g0249301 58.621 58 23 1 140 197 61 117 2.53e-15 73.9
Msa1112980 MtrunA17_Chr7g0249311 51.064 94 46 0 104 197 355 448 2.35e-23 97.4
Msa1112980 MtrunA17_Chr7g0249311 63.158 57 20 1 141 197 179 234 1.11e-17 81.3
Msa1112980 MtrunA17_Chr7g0263531 43.750 112 51 1 98 197 306 417 8.59e-22 92.4
Msa1112980 MtrunA17_Chr7g0263531 62.500 56 20 1 142 197 190 244 2.90e-16 76.6
Msa1112980 MtrunA17_Chr3g0099641 50.575 87 39 2 125 207 235 321 2.98e-21 91.3
Msa1112980 MtrunA17_Chr2g0288871 50.000 80 39 1 120 198 284 363 3.02e-21 91.3
Msa1112980 MtrunA17_Chr2g0333851 52.564 78 34 2 124 198 150 227 7.80e-21 88.6
Msa1112980 MtrunA17_Chr6g0485431 50.685 73 35 1 126 197 139 211 7.96e-21 89.0
Msa1112980 MtrunA17_Chr2g0302391 34.503 171 86 6 58 207 116 281 8.85e-21 89.7
Msa1112980 MtrunA17_Chr4g0075201 48.750 80 40 1 120 198 246 325 8.85e-21 89.7
Msa1112980 MtrunA17_Chr7g0270831 38.849 139 59 3 61 198 161 274 1.21e-20 89.4
Msa1112980 MtrunA17_Chr7g0238921 63.158 57 21 0 141 197 124 180 3.01e-20 87.0
Msa1112980 MtrunA17_Chr5g0447701 54.286 70 32 0 128 197 239 308 7.24e-20 86.7
Msa1112980 MtrunA17_Chr5g0447701 53.226 62 28 1 137 198 88 148 1.55e-14 71.6
Msa1112980 MtrunA17_Chr1g0147881 42.857 98 52 2 108 204 232 326 9.40e-20 85.9
Msa1112980 MtrunA17_Chr1g0189391 37.097 124 64 3 81 197 38 154 2.16e-19 84.7
Msa1112980 MtrunA17_Chr4g0025061 44.211 95 49 2 128 218 347 441 2.60e-19 85.9
Msa1112980 MtrunA17_Chr4g0074001 36.000 150 81 3 63 197 266 415 5.32e-19 84.7
Msa1112980 MtrunA17_Chr2g0322391 46.250 80 42 1 119 197 327 406 5.76e-19 84.7
Msa1112980 MtrunA17_Chr7g0216891 51.389 72 34 1 128 198 206 277 6.38e-19 84.7
Msa1112980 MtrunA17_Chr4g0025051 32.164 171 99 4 45 198 223 393 7.84e-19 84.3
Msa1112980 MtrunA17_Chr4g0060271 50.667 75 36 1 124 197 238 312 1.23e-18 84.0
Msa1112980 MtrunA17_Chr1g0188941 46.053 76 41 0 122 197 32 107 1.34e-18 78.2
Msa1112980 MtrunA17_Chr4g0051181 52.778 72 33 1 128 198 230 301 1.67e-18 83.2
Msa1112980 MtrunA17_Chr4g0053281 44.186 86 44 2 113 197 241 323 5.13e-18 81.3
Msa1112980 MtrunA17_Chr4g0071521 45.783 83 41 2 116 197 223 302 2.43e-17 79.0
Msa1112980 MtrunA17_Chr7g0270051 50.000 72 35 1 142 212 54 125 2.60e-17 78.2
Msa1112980 MtrunA17_Chr4g0001361 47.436 78 38 2 124 198 143 220 3.48e-17 78.6
Msa1112980 MtrunA17_Chr3g0126391 34.532 139 81 3 80 210 67 203 1.81e-16 76.6
Msa1112980 MtrunA17_Chr1g0150281 54.098 61 27 1 142 201 141 201 2.29e-16 75.9
Msa1112980 MtrunA17_Chr1g0150271 51.667 60 28 1 139 197 99 158 6.59e-16 74.3
Msa1112980 MtrunA17_Chr5g0401821 39.806 103 49 3 96 197 166 256 7.13e-16 74.3
Msa1112980 MtrunA17_Chr3g0136961 47.368 76 37 2 125 197 120 195 9.63e-16 74.3
Msa1112980 MtrunA17_Chr1g0184691 43.373 83 43 2 116 197 271 350 1.28e-15 74.7
Msa1112980 MtrunA17_Chr2g0315361 50.769 65 29 1 134 195 141 205 2.36e-15 73.2
Msa1112980 MtrunA17_Chr8g0387501 50.769 65 31 1 135 198 123 187 3.26e-15 72.4
Msa1112980 MtrunA17_Chr8g0387981 42.056 107 43 5 97 195 94 189 4.21e-15 73.2
Msa1112980 MtrunA17_Chr2g0293481 41.860 86 47 3 116 198 240 325 6.23e-15 72.8
Msa1112980 MtrunA17_Chr5g0447711 40.506 79 47 0 119 197 208 286 6.73e-15 72.0
Msa1112980 MtrunA17_Chr5g0447711 41.176 68 37 2 133 198 73 139 2.82e-11 61.6
Msa1112980 MtrunA17_Chr7g0248691 41.667 84 40 2 116 198 137 212 1.57e-14 71.2
Msa1112980 MtrunA17_Chr8g0347251 40.964 83 41 2 121 195 111 193 3.03e-14 70.5
Msa1112980 MtrunA17_Chr7g0275531 52.542 59 25 1 140 195 117 175 8.64e-14 68.9
Msa1112980 MtrunA17_Chr1g0202461 45.312 64 34 1 135 197 255 318 1.49e-13 68.9
Msa1112980 MtrunA17_Chr8g0348311 46.875 64 33 1 136 198 150 213 1.51e-13 68.6
Msa1112980 MtrunA17_Chr3g0139021 39.759 83 46 2 116 197 292 371 1.57e-13 68.6
Msa1112980 MtrunA17_Chr8g0379461 49.123 57 28 1 142 197 77 133 1.58e-13 67.4
Msa1112980 MtrunA17_Chr8g0334541 51.562 64 26 2 141 201 103 164 1.58e-13 67.8
Msa1112980 MtrunA17_Chr2g0284321 49.123 57 28 1 142 197 36 92 1.67e-13 67.0
Msa1112980 MtrunA17_Chr4g0024391 41.667 72 41 1 128 198 216 287 2.75e-13 68.2
Msa1112980 MtrunA17_Chr2g0315381 36.937 111 55 4 108 205 101 209 3.03e-13 67.4
Msa1112980 MtrunA17_Chr7g0244981 50.000 58 26 1 141 195 122 179 3.13e-13 67.0
Msa1112980 MtrunA17_Chr7g0228941 38.542 96 53 4 119 213 33 123 3.15e-13 64.3
Msa1112980 MtrunA17_Chr5g0432071 50.877 57 27 1 141 197 104 159 6.60e-13 65.1
Msa1112980 MtrunA17_Chr3g0128671 32.061 131 74 4 85 205 67 192 9.45e-13 65.9
Msa1112980 MtrunA17_Chr8g0350621 34.343 99 52 3 115 202 77 173 1.17e-12 65.5
Msa1112980 MtrunA17_Chr2g0289181 43.548 62 34 1 137 197 10 71 3.00e-12 63.9
Msa1112980 MtrunA17_Chr2g0315371 40.741 81 42 3 118 195 121 198 3.70e-12 64.3
Msa1112980 MtrunA17_Chr7g0244971 45.763 59 29 1 140 195 122 180 4.41e-12 63.9
Msa1112980 MtrunA17_Chr2g0319961 49.123 57 28 1 142 197 81 137 7.40e-12 63.2
Msa1112980 MtrunA17_Chr5g0428351 44.444 63 32 1 136 195 178 240 1.76e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1112980 AT5G41570.1 72.174 115 24 1 105 219 70 176 1.22e-57 180
Msa1112980 AT1G64000.1 73.529 102 27 0 118 219 91 192 5.61e-55 174
Msa1112980 AT2G46130.1 78.571 98 21 0 122 219 11 108 8.52e-54 168
Msa1112980 AT2G46130.2 74.490 98 21 1 122 219 11 104 3.90e-48 154
Msa1112980 AT5G13080.1 68.478 92 29 0 128 219 54 145 3.23e-42 140
Msa1112980 AT2G44745.1 64.557 79 28 0 119 197 123 201 5.85e-34 121
Msa1112980 AT3G01970.1 59.551 89 36 0 128 216 52 140 7.55e-33 116
Msa1112980 AT1G69310.4 51.240 121 53 2 77 197 89 203 2.38e-31 116
Msa1112980 AT1G69310.2 51.240 121 53 2 77 197 89 203 2.38e-31 116
Msa1112980 AT1G69310.1 51.240 121 53 2 77 197 89 203 2.38e-31 116
Msa1112980 AT4G18170.1 63.529 85 27 1 118 198 145 229 6.54e-31 115
Msa1112980 AT1G29860.1 73.239 71 19 0 128 198 123 193 2.08e-30 114
Msa1112980 AT5G46350.1 40.323 186 85 4 28 198 66 240 3.35e-30 114
Msa1112980 AT5G49520.1 74.648 71 18 0 128 198 208 278 9.59e-30 114
Msa1112980 AT2G03340.1 44.275 131 69 1 71 197 341 471 4.78e-29 113
Msa1112980 AT2G03340.1 56.061 66 28 1 132 197 241 305 7.77e-18 82.0
Msa1112980 AT4G39410.1 59.494 79 32 0 119 197 201 279 8.96e-29 110
Msa1112980 AT2G47260.1 59.783 92 28 1 106 197 148 230 3.64e-28 108
Msa1112980 AT2G38470.1 52.427 103 41 1 103 197 316 418 3.31e-26 105
Msa1112980 AT2G38470.1 56.897 58 24 1 141 198 184 240 3.39e-14 71.2
Msa1112980 AT1G13960.1 60.526 76 30 0 122 197 390 465 6.45e-26 105
Msa1112980 AT1G13960.1 58.065 62 25 1 136 197 224 284 2.88e-17 80.1
Msa1112980 AT1G69310.3 47.934 121 53 3 77 197 89 199 7.64e-26 101
Msa1112980 AT1G13960.2 60.526 76 30 0 122 197 237 312 7.66e-26 103
Msa1112980 AT1G13960.2 58.065 62 25 1 136 197 71 131 9.08e-17 78.2
Msa1112980 AT5G64810.1 49.438 89 43 1 111 197 78 166 2.72e-25 98.2
Msa1112980 AT2G04880.2 51.648 91 39 1 112 197 249 339 3.20e-25 102
Msa1112980 AT2G04880.2 55.000 60 26 1 139 198 109 167 6.04e-16 76.3
Msa1112980 AT5G56270.1 53.191 94 44 0 104 197 450 543 4.33e-25 103
Msa1112980 AT5G56270.1 59.649 57 22 1 141 197 273 328 1.39e-16 78.2
Msa1112980 AT2G04880.1 51.648 91 39 1 112 197 273 363 4.48e-25 102
Msa1112980 AT2G04880.1 55.000 60 26 1 139 198 109 167 6.62e-16 76.3
Msa1112980 AT3G62340.1 56.471 85 37 0 119 203 96 180 5.95e-25 99.4
Msa1112980 AT4G26640.5 59.211 76 31 0 122 197 186 261 6.69e-25 100
Msa1112980 AT4G26640.5 58.333 60 24 1 139 198 33 91 3.94e-17 79.3
Msa1112980 AT4G26640.6 59.211 76 31 0 122 197 186 261 6.69e-25 100
Msa1112980 AT4G26640.6 58.333 60 24 1 139 198 33 91 3.94e-17 79.3
Msa1112980 AT4G26640.4 59.211 76 31 0 122 197 186 261 6.69e-25 100
Msa1112980 AT4G26640.4 58.333 60 24 1 139 198 33 91 3.94e-17 79.3
Msa1112980 AT4G26640.3 59.211 76 31 0 122 197 186 261 6.69e-25 100
Msa1112980 AT4G26640.3 58.333 60 24 1 139 198 33 91 3.94e-17 79.3
Msa1112980 AT5G26170.1 60.000 70 28 0 128 197 100 169 7.19e-25 96.7
Msa1112980 AT4G26640.7 59.211 76 31 0 122 197 322 397 7.66e-25 102
Msa1112980 AT4G26640.7 58.333 60 24 1 139 198 169 227 3.03e-17 80.1
Msa1112980 AT4G26640.1 59.211 76 31 0 122 197 290 365 8.58e-25 101
Msa1112980 AT4G26640.1 58.333 60 24 1 139 198 137 195 3.39e-17 80.1
Msa1112980 AT3G01080.2 57.895 76 32 0 122 197 325 400 8.95e-25 101
Msa1112980 AT3G01080.2 57.377 61 25 1 137 197 201 260 1.79e-16 77.8
Msa1112980 AT4G26640.2 59.211 76 31 0 122 197 362 437 9.45e-25 101
Msa1112980 AT4G26640.2 58.333 60 24 1 139 198 209 267 2.91e-17 80.1
Msa1112980 AT3G01080.1 57.895 76 32 0 122 197 287 362 1.31e-24 100
Msa1112980 AT3G01080.1 57.377 61 25 1 137 197 163 222 3.17e-16 77.0
Msa1112980 AT2G30250.1 58.974 78 32 0 120 197 307 384 6.08e-24 98.6
Msa1112980 AT2G30250.1 41.772 79 40 2 120 198 150 222 5.45e-13 67.4
Msa1112980 AT5G07100.1 45.299 117 61 1 81 197 177 290 6.91e-24 97.1
Msa1112980 AT5G07100.1 45.714 70 38 0 129 198 105 174 2.22e-14 70.9
Msa1112980 AT5G07100.2 45.299 117 61 1 81 197 84 197 1.03e-23 94.7
Msa1112980 AT5G07100.2 45.714 70 38 0 129 198 12 81 2.51e-14 69.7
Msa1112980 AT5G07100.4 45.299 117 61 1 81 197 84 197 1.03e-23 94.7
Msa1112980 AT5G07100.4 45.714 70 38 0 129 198 12 81 2.51e-14 69.7
Msa1112980 AT5G07100.5 45.299 117 61 1 81 197 84 197 1.03e-23 94.7
Msa1112980 AT5G07100.5 45.714 70 38 0 129 198 12 81 2.51e-14 69.7
Msa1112980 AT5G07100.3 45.299 117 61 1 81 197 84 197 1.03e-23 94.7
Msa1112980 AT5G07100.3 45.714 70 38 0 129 198 12 81 2.51e-14 69.7
Msa1112980 AT4G26440.1 51.064 94 46 0 104 197 335 428 3.00e-23 97.4
Msa1112980 AT4G26440.1 59.649 57 22 1 141 197 178 233 1.95e-16 77.8
Msa1112980 AT1G55600.1 53.846 78 36 0 122 199 288 365 3.52e-23 97.1
Msa1112980 AT4G04450.2 47.126 87 45 1 113 198 170 256 1.83e-21 92.0
Msa1112980 AT1G62300.1 51.250 80 38 1 120 198 291 370 3.16e-21 91.7
Msa1112980 AT4G04450.1 47.126 87 45 1 113 198 264 350 6.56e-21 90.9
Msa1112980 AT4G22070.4 50.000 80 39 1 120 198 276 355 9.52e-21 90.5
Msa1112980 AT4G22070.3 50.000 80 39 1 120 198 276 355 9.52e-21 90.5
Msa1112980 AT4G22070.2 50.000 80 39 1 120 198 276 355 9.52e-21 90.5
Msa1112980 AT4G22070.1 50.000 80 39 1 120 198 276 355 9.52e-21 90.5
Msa1112980 AT2G37260.2 40.351 114 64 1 84 197 214 323 4.12e-20 87.4
Msa1112980 AT2G37260.2 52.703 74 33 2 125 197 66 138 8.68e-16 75.5
Msa1112980 AT2G37260.3 40.351 114 64 1 84 197 216 325 4.16e-20 87.4
Msa1112980 AT2G37260.3 52.703 74 33 2 125 197 68 140 8.53e-16 75.5
Msa1112980 AT2G37260.1 40.351 114 64 1 84 197 296 405 5.53e-20 87.8
Msa1112980 AT2G37260.1 52.703 74 33 2 125 197 148 220 9.45e-16 75.5
Msa1112980 AT5G43290.1 49.333 75 37 1 124 197 96 170 5.67e-20 85.9
Msa1112980 AT1G18860.1 52.500 80 33 2 120 198 222 297 7.05e-20 87.8
Msa1112980 AT2G24570.1 38.532 109 63 2 108 215 213 318 1.72e-19 85.5
Msa1112980 AT4G01720.1 54.167 72 32 1 128 198 226 297 2.92e-19 85.9
Msa1112980 AT2G21900.1 40.196 102 54 2 105 203 74 171 3.91e-19 82.4
Msa1112980 AT1G80840.1 48.052 77 37 2 125 198 128 204 5.20e-19 84.0
Msa1112980 AT1G68150.1 52.778 72 33 1 128 198 222 293 7.76e-19 84.0
Msa1112980 AT4G31550.1 31.461 178 110 5 32 207 146 313 2.31e-18 82.4
Msa1112980 AT2G25000.2 46.154 78 41 1 121 197 83 160 3.54e-18 80.1
Msa1112980 AT2G25000.4 46.154 78 41 1 121 197 83 160 3.54e-18 80.1
Msa1112980 AT4G30935.1 46.154 78 42 0 120 197 310 387 5.08e-18 82.4
Msa1112980 AT2G25000.3 46.154 78 41 1 121 197 105 182 5.19e-18 80.1
Msa1112980 AT5G28650.1 39.806 103 55 3 96 197 223 319 5.41e-18 81.3
Msa1112980 AT5G15130.2 36.170 141 81 4 58 197 110 242 7.56e-18 82.0
Msa1112980 AT2G25000.1 46.154 78 41 1 121 197 126 203 8.05e-18 80.1
Msa1112980 AT5G15130.1 36.170 141 81 4 58 197 152 284 1.01e-17 81.6
Msa1112980 AT2G30590.1 44.048 84 43 2 116 198 291 371 1.76e-17 80.5
Msa1112980 AT3G04670.1 39.806 103 55 3 96 197 223 319 3.66e-17 79.0
Msa1112980 AT4G31550.2 39.785 93 52 2 116 207 223 312 3.91e-17 79.0
Msa1112980 AT4G24240.1 37.097 124 63 4 85 207 237 346 4.46e-17 79.0
Msa1112980 AT3G01080.3 57.377 61 25 1 137 197 201 260 4.54e-17 78.6
Msa1112980 AT4G31800.2 52.542 59 27 1 140 197 110 168 8.53e-17 77.0
Msa1112980 AT4G31800.1 52.542 59 27 1 140 197 175 233 1.23e-16 77.4
Msa1112980 AT2G34830.1 40.367 109 61 4 93 198 166 273 1.27e-16 78.2
Msa1112980 AT2G34830.2 40.367 109 61 4 93 198 175 282 1.42e-16 78.2
Msa1112980 AT5G24110.1 39.000 100 51 3 120 209 85 184 9.44e-16 74.7
Msa1112980 AT1G69810.2 35.135 148 78 5 54 198 72 204 1.11e-15 74.7
Msa1112980 AT1G69810.1 35.135 148 78 5 54 198 130 262 1.71e-15 74.7
Msa1112980 AT2G23320.1 37.634 93 46 3 106 197 216 297 1.73e-15 74.3
Msa1112980 AT1G30650.1 37.815 119 69 5 83 198 159 275 2.38e-15 74.3
Msa1112980 AT5G45260.1 42.169 83 36 3 119 198 1195 1268 7.95e-15 73.6
Msa1112980 AT5G45050.4 35.000 160 68 6 55 207 978 1108 8.13e-15 73.2
Msa1112980 AT2G40740.1 49.275 69 32 1 130 195 162 230 9.72e-15 72.0
Msa1112980 AT5G45050.1 35.000 160 68 6 55 207 1117 1247 1.02e-14 73.2
Msa1112980 AT5G45050.2 35.000 160 68 6 55 207 1089 1219 1.15e-14 72.8
Msa1112980 AT2G40740.3 49.275 69 32 1 130 195 171 239 1.25e-14 71.6
Msa1112980 AT4G23810.1 43.038 79 40 2 134 209 151 227 1.39e-14 71.6
Msa1112980 AT3G56400.1 47.143 70 32 2 139 205 118 185 3.62e-14 70.5
Msa1112980 AT1G29280.1 41.111 90 49 3 113 198 43 132 4.78e-14 69.7
Msa1112980 AT2G46400.1 44.706 85 41 3 121 202 85 166 1.38e-13 68.6
Msa1112980 AT4G01250.1 44.444 72 39 1 142 212 129 200 1.53e-13 68.6
Msa1112980 AT5G52830.1 47.619 63 32 1 137 198 161 223 1.68e-13 68.9
Msa1112980 AT4G12020.10 44.595 74 40 1 124 197 451 523 2.54e-13 68.9
Msa1112980 AT4G12020.4 44.595 74 40 1 124 197 451 523 2.61e-13 68.9
Msa1112980 AT4G12020.3 44.595 74 40 1 124 197 451 523 2.69e-13 68.9
Msa1112980 AT4G12020.2 44.595 74 40 1 124 197 451 523 2.71e-13 68.9
Msa1112980 AT4G12020.5 44.595 74 40 1 124 197 384 456 2.84e-13 68.9
Msa1112980 AT4G12020.7 44.595 74 40 1 124 197 451 523 2.88e-13 68.9
Msa1112980 AT4G12020.1 44.595 74 40 1 124 197 451 523 2.97e-13 68.9
Msa1112980 AT4G12020.9 44.595 74 40 1 124 197 451 523 2.97e-13 68.9
Msa1112980 AT4G12020.6 44.595 74 40 1 124 197 451 523 3.05e-13 68.9
Msa1112980 AT4G12020.8 44.595 74 40 1 124 197 451 523 3.05e-13 68.9
Msa1112980 AT4G12020.11 44.595 74 40 1 124 197 451 523 5.14e-13 68.2
Msa1112980 AT3G58710.2 51.724 58 27 1 142 198 71 128 6.43e-13 66.6
Msa1112980 AT3G58710.1 51.724 58 27 1 142 198 72 129 6.55e-13 66.6
Msa1112980 AT4G11070.2 42.169 83 40 2 121 195 84 166 6.82e-13 66.6
Msa1112980 AT4G11070.1 42.169 83 40 2 121 195 116 198 9.73e-13 66.2
Msa1112980 AT1G66560.1 50.000 58 26 1 141 195 103 160 1.16e-12 65.5
Msa1112980 AT2G40750.1 39.326 89 50 2 111 195 121 209 1.18e-12 66.2
Msa1112980 AT4G23550.1 46.774 62 32 1 137 197 136 197 1.32e-12 65.9
Msa1112980 AT5G01900.1 38.298 94 51 2 105 195 78 167 3.63e-12 64.3
Msa1112980 AT5G22570.1 41.333 75 41 1 135 206 104 178 6.81e-12 63.9
Msa1112980 AT1G66550.2 46.552 58 28 1 141 195 103 160 3.38e-11 61.6
Msa1112980 AT1G66550.1 46.552 58 28 1 141 195 108 165 4.18e-11 61.2
Msa1112980 AT1G66600.1 47.458 59 28 1 140 195 102 160 8.28e-11 60.1

Find 52 sgRNAs with CRISPR-Local

Find 167 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTTCATCTTCTTCTAATT+TGG 0.109939 7_3:+59122133 Msa1112980:CDS
AAGAAGTGTTGATGATATTT+TGG 0.221201 7_3:+59122286 Msa1112980:CDS
ATTAATGGTGGTGGTGGGTT+TGG 0.274937 7_3:-59121906 None:intergenic
CACCACAATGCTAGTATCTT+TGG 0.301892 7_3:-59125153 None:intergenic
GGTGATGGGATATTCATTAA+TGG 0.303707 7_3:-59121921 None:intergenic
GTGGTGGGTTTGGTGGGTCT+TGG 0.304953 7_3:-59121896 None:intergenic
ACAACAATAGCTTGCTTGTT+GGG 0.309012 7_3:+59122069 Msa1112980:CDS
GGTTATCGTTGGAGGAAATA+TGG 0.317694 7_3:+59122314 Msa1112980:CDS
GAAACAAGTTAGAGGAGAAA+AGG 0.356863 7_3:+59122207 Msa1112980:CDS
TTAGAGGAGAAAAGGGTTAG+AGG 0.362096 7_3:+59122215 Msa1112980:CDS
TTCTTTACAAAATTACCCTT+TGG 0.380075 7_3:+59121989 Msa1112980:CDS
CATTGTGGTGACTACTTATG+AGG 0.394639 7_3:+59125166 Msa1112980:CDS
AGAAAAGGGAAACAAGTTAG+AGG 0.399768 7_3:+59122199 Msa1112980:CDS
TCAACTACATGAAGAAGAAA+AGG 0.419090 7_3:+59122184 Msa1112980:CDS
AAACAAGTTAGAGGAGAAAA+GGG 0.432866 7_3:+59122208 Msa1112980:CDS
AACAACAATAGCTTGCTTGT+TGG 0.439151 7_3:+59122068 Msa1112980:CDS
GAATCACAAGATCAAGGTCT+TGG 0.450978 7_3:+59122011 Msa1112980:CDS
ATGGTGGTGGTGGGTTTGGT+GGG 0.457794 7_3:-59121902 None:intergenic
TGGATGATGGTTATCGTTGG+AGG 0.458848 7_3:+59122306 Msa1112980:CDS
AAAGAAGGCGTGAAGAAGAA+GGG 0.459669 7_3:-59121972 None:intergenic
ATATTCATTAATGGTGGTGG+TGG 0.463366 7_3:-59121912 None:intergenic
TAAAGAAGGCGTGAAGAAGA+AGG 0.467672 7_3:-59121973 None:intergenic
AATGGTGGTGGTGGGTTTGG+TGG 0.469202 7_3:-59121903 None:intergenic
GTAATTCAAAATAATGAAAG+TGG 0.470864 7_3:+59122155 Msa1112980:CDS
AGGAGAAAAGGGTTAGAGGT+GGG 0.487742 7_3:+59122219 Msa1112980:CDS
TATTCATTAATGGTGGTGGT+GGG 0.497156 7_3:-59121911 None:intergenic
CACATGCAACGTGAAGAAAC+AGG 0.504608 7_3:+59125118 Msa1112980:CDS
AACTGTATTTGCTTTAGAAG+AGG 0.505645 7_3:-59125233 None:intergenic
CTTGATCTTGTGATTCCAAA+GGG 0.509438 7_3:-59122004 None:intergenic
CAACTACATGAAGAAGAAAA+GGG 0.514940 7_3:+59122185 Msa1112980:CDS
GTTTCCATCAGCTTCTCGCA+TGG 0.515796 7_3:-59125203 None:intergenic
CCTTTGGAATCACAAGATCA+AGG 0.519006 7_3:+59122005 Msa1112980:CDS
CTTGCTTGTTGGGGATGCTA+AGG 0.519688 7_3:+59122079 Msa1112980:CDS
TTTCCATCAGCTTCTCGCAT+GGG 0.522203 7_3:-59125202 None:intergenic
GAGGAGAAAAGGGTTAGAGG+TGG 0.538687 7_3:+59122218 Msa1112980:CDS
AAGAAGGCGTGAAGAAGAAG+GGG 0.539107 7_3:-59121971 None:intergenic
GGGATATTCATTAATGGTGG+TGG 0.540612 7_3:-59121915 None:intergenic
CAACAATAGCTTGCTTGTTG+GGG 0.541714 7_3:+59122070 Msa1112980:CDS
CCATCAGCTTCTCGCATGGG+TGG 0.547684 7_3:-59125199 None:intergenic
CCTTGATCTTGTGATTCCAA+AGG 0.562491 7_3:-59122005 None:intergenic
CTTGTCTGAAATGCAAACCT+TGG 0.566555 7_3:-59122266 None:intergenic
TCAAGAACAGCAAGTATCCC+AGG 0.569780 7_3:+59122348 Msa1112980:CDS
AGGTCTTGGTGATATTGAGT+GGG 0.577572 7_3:+59122025 Msa1112980:CDS
CCACCCATGCGAGAAGCTGA+TGG 0.580190 7_3:+59125199 Msa1112980:CDS
ATTGTGGTGACTACTTATGA+GGG 0.595440 7_3:+59125167 Msa1112980:CDS
AAGGTCTTGGTGATATTGAG+TGG 0.598654 7_3:+59122024 Msa1112980:CDS
ACGTGAAGAAACAGGTGCAA+AGG 0.603852 7_3:+59125126 Msa1112980:CDS
TAATTCAAAATAATGAAAGT+GGG 0.605922 7_3:+59122156 Msa1112980:CDS
GATGGGATATTCATTAATGG+TGG 0.606842 7_3:-59121918 None:intergenic
TTCCAAAGATACTAGCATTG+TGG 0.630354 7_3:+59125151 Msa1112980:CDS
AAAAGACAACAAAAGTGCCA+AGG 0.641958 7_3:+59122249 Msa1112980:CDS
GGTCTTGGTGATATTGAGTG+GGG 0.698935 7_3:+59122026 Msa1112980:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATCTTTACAAAAATAAA+TGG + chr7_3:59122575-59122594 Msa1112980:intron 10.0%
!! ATAATCTTTACAAAAATAAA+TGG + chr7_3:59122842-59122861 Msa1112980:intron 10.0%
!!! TTTAAAATAATTAACTTCAT+TGG - chr7_3:59123468-59123487 None:intergenic 10.0%
!!! AAAGACAAATATTTTATATA+AGG + chr7_3:59123565-59123584 Msa1112980:intron 10.0%
!!! AAGACAAATATTTTATATAA+GGG + chr7_3:59123566-59123585 Msa1112980:intron 10.0%
!! ATACTAATTAAATTCTTTAT+TGG + chr7_3:59123823-59123842 Msa1112980:intron 10.0%
!! ATTAAACATAAAAAATGATA+GGG + chr7_3:59123899-59123918 Msa1112980:intron 10.0%
!! TAATTCAAAATAATGAAAGT+GGG + chr7_3:59122156-59122175 Msa1112980:CDS 15.0%
!! TTAGAAGAATAAATTTAGAA+GGG - chr7_3:59123035-59123054 None:intergenic 15.0%
!! TTTAGAAGAATAAATTTAGA+AGG - chr7_3:59123036-59123055 None:intergenic 15.0%
!! TGTTTGATAAAATTAAATGT+TGG - chr7_3:59123285-59123304 None:intergenic 15.0%
!! CCTTAATTTAAAAAATATTG+TGG - chr7_3:59123386-59123405 None:intergenic 15.0%
!!! CCACAATATTTTTTAAATTA+AGG + chr7_3:59123383-59123402 Msa1112980:intron 15.0%
!! GATTAAACATAAAAAATGAT+AGG + chr7_3:59123898-59123917 Msa1112980:intron 15.0%
!! AATTAAACAAATTTGAATTG+AGG - chr7_3:59124037-59124056 None:intergenic 15.0%
!!! TGAATTTTTTTAAATGACAA+AGG - chr7_3:59124189-59124208 None:intergenic 15.0%
!!! ATATTACTTTTTTTATATGC+AGG + chr7_3:59124245-59124264 Msa1112980:intron 15.0%
!!! TATTACTTTTTTTATATGCA+GGG + chr7_3:59124246-59124265 Msa1112980:intron 15.0%
!!! AGAAGTAATTTTTTTTTTGT+AGG + chr7_3:59124502-59124521 Msa1112980:intron 15.0%
!!! GAAGTAATTTTTTTTTTGTA+GGG + chr7_3:59124503-59124522 Msa1112980:intron 15.0%
!! AAACCTATTAAAATTAAGTA+AGG + chr7_3:59124532-59124551 Msa1112980:intron 15.0%
!!! AATCCTTACTTAATTTTAAT+AGG - chr7_3:59124538-59124557 None:intergenic 15.0%
!! TTAAAATTTATAAACTATCG+AGG - chr7_3:59124806-59124825 None:intergenic 15.0%
!!! CGATAGTTTATAAATTTTAA+CGG + chr7_3:59124806-59124825 Msa1112980:intron 15.0%
!! GTAATTCAAAATAATGAAAG+TGG + chr7_3:59122155-59122174 Msa1112980:CDS 20.0%
!!! TTTGTTAAGTTTGAAATTGA+GGG - chr7_3:59122431-59122450 None:intergenic 20.0%
!!! TTTTGTTAAGTTTGAAATTG+AGG - chr7_3:59122432-59122451 None:intergenic 20.0%
!! AGATGTATATTACATTTCTA+AGG + chr7_3:59122501-59122520 Msa1112980:intron 20.0%
!! ATCTTTACAAAAATAAATGG+AGG + chr7_3:59122578-59122597 Msa1112980:intron 20.0%
!! TCTTTACAAAAATAAATGGA+GGG + chr7_3:59122579-59122598 Msa1112980:intron 20.0%
!!! TACAATTTTAGAGAAGAAAT+TGG - chr7_3:59122700-59122719 None:intergenic 20.0%
!!! AATTTCTTCTCTAAAATTGT+AGG + chr7_3:59122699-59122718 Msa1112980:intron 20.0%
!! GTAAAGATTATAAATGACAA+TGG - chr7_3:59122833-59122852 None:intergenic 20.0%
!! ATCTTTACAAAAATAAATGG+AGG + chr7_3:59122578-59122597 Msa1112980:intron 20.0%
!! TCTTTACAAAAATAAATGGA+GGG + chr7_3:59122579-59122598 Msa1112980:intron 20.0%
!! TAATAAACTTTCCATTTGTT+TGG + chr7_3:59123145-59123164 Msa1112980:intron 20.0%
!!! GTTTAATTTAAGTAGGTTAA+AGG + chr7_3:59123234-59123253 Msa1112980:intron 20.0%
!!! TAAAAGTTCCCAATTTTATA+GGG - chr7_3:59123942-59123961 None:intergenic 20.0%
!!! TTAAAAGTTCCCAATTTTAT+AGG - chr7_3:59123943-59123962 None:intergenic 20.0%
!!! TGAGTGCATAAATTTTTTTA+GGG - chr7_3:59124002-59124021 None:intergenic 20.0%
!!! ATTACTTTTTTTATATGCAG+GGG + chr7_3:59124247-59124266 Msa1112980:intron 20.0%
!!! CATAAATGTCATATCATTTT+GGG - chr7_3:59124606-59124625 None:intergenic 20.0%
!!! TCATAAATGTCATATCATTT+TGG - chr7_3:59124607-59124626 None:intergenic 20.0%
!!! AAATGATCAATATCTCTTTT+AGG + chr7_3:59124891-59124910 Msa1112980:intron 20.0%
!!! ATTTTACCAATGCAAATTTA+TGG - chr7_3:59125068-59125087 None:intergenic 20.0%
!! AAAGGGTAATTTTGTAAAGA+AGG - chr7_3:59121990-59122009 None:intergenic 25.0%
! TTCTTTACAAAATTACCCTT+TGG + chr7_3:59121989-59122008 Msa1112980:CDS 25.0%
!!! AAGAAGTGTTGATGATATTT+TGG + chr7_3:59122286-59122305 Msa1112980:CDS 25.0%
! ATGTTTGTGAAATCATCATT+TGG + chr7_3:59122385-59122404 Msa1112980:intron 25.0%
!!! TATTTTGTTTGCCAAACAAA+TGG - chr7_3:59123159-59123178 None:intergenic 25.0%
! GCTCGTATAAAAGATTAATT+TGG + chr7_3:59123192-59123211 Msa1112980:intron 25.0%
!!! AATTTGGTAACCATCATTTT+CGG + chr7_3:59123208-59123227 Msa1112980:intron 25.0%
! ATTAAACTTACCGAAAATGA+TGG - chr7_3:59123221-59123240 None:intergenic 25.0%
!! TCGGTAAGTTTAATTTAAGT+AGG + chr7_3:59123227-59123246 Msa1112980:intron 25.0%
!! ATTATTTGCTACCTTTATTG+AGG + chr7_3:59123632-59123651 Msa1112980:intron 25.0%
! CTAATTAAACTCCTCAATAA+AGG - chr7_3:59123646-59123665 None:intergenic 25.0%
!! TATTTTACACATGCATTCAA+TGG + chr7_3:59123687-59123706 Msa1112980:intron 25.0%
!! GTGTTTTCATATTCCTTAAT+TGG + chr7_3:59123747-59123766 Msa1112980:intron 25.0%
!! TTTTTGCTCCCTATAAAATT+GGG + chr7_3:59123931-59123950 Msa1112980:intron 25.0%
!!! CTGAGTGCATAAATTTTTTT+AGG - chr7_3:59124003-59124022 None:intergenic 25.0%
! AAACAAATTTGAATTGAGGA+GGG - chr7_3:59124033-59124052 None:intergenic 25.0%
! TAAACAAATTTGAATTGAGG+AGG - chr7_3:59124034-59124053 None:intergenic 25.0%
!! CAAGTTTAGAATACTATGAA+AGG - chr7_3:59124409-59124428 None:intergenic 25.0%
!! TTAGAAGTTCCCAATTTTAT+AGG + chr7_3:59124562-59124581 Msa1112980:intron 25.0%
!! TAGAAGTTCCCAATTTTATA+GGG + chr7_3:59124563-59124582 Msa1112980:intron 25.0%
!!! TTTTTGGTCCCTATAAAATT+GGG - chr7_3:59124574-59124593 None:intergenic 25.0%
!!! TTTTGGGTTAAATGTGTTTT+TGG - chr7_3:59124590-59124609 None:intergenic 25.0%
! GACATTTATGATTGAATGAT+TGG + chr7_3:59124616-59124635 Msa1112980:intron 25.0%
!! CTTAGAGAAAGAGTATAATT+TGG - chr7_3:59124685-59124704 None:intergenic 25.0%
! AGTGAAACTAAGAGAAAAAT+AGG + chr7_3:59124837-59124856 Msa1112980:intron 25.0%
! GTGAAACTAAGAGAAAAATA+GGG + chr7_3:59124838-59124857 Msa1112980:intron 25.0%
CACTTCATCTTCTTCTAATT+TGG + chr7_3:59122133-59122152 Msa1112980:CDS 30.0%
TCAACTACATGAAGAAGAAA+AGG + chr7_3:59122184-59122203 Msa1112980:CDS 30.0%
CAACTACATGAAGAAGAAAA+GGG + chr7_3:59122185-59122204 Msa1112980:CDS 30.0%
AAACAAGTTAGAGGAGAAAA+GGG + chr7_3:59122208-59122227 Msa1112980:CDS 30.0%
!!! GTTGATGATATTTTGGATGA+TGG + chr7_3:59122293-59122312 Msa1112980:CDS 30.0%
CATACATGTAGTATATACCT+GGG - chr7_3:59122368-59122387 None:intergenic 30.0%
ACATACATGTAGTATATACC+TGG - chr7_3:59122369-59122388 None:intergenic 30.0%
!! GACGATTTTGATAAATGTCT+TGG + chr7_3:59122868-59122887 Msa1112980:intron 30.0%
ATATACTGTCACACCAATTA+AGG - chr7_3:59123763-59123782 None:intergenic 30.0%
ATTGGTTAGCAATACTCTAT+CGG + chr7_3:59123841-59123860 Msa1112980:intron 30.0%
! GTTTTTGCTCCCTATAAAAT+TGG + chr7_3:59123930-59123949 Msa1112980:intron 30.0%
!!! TTTGCGATAATTTTTTGCAG+AGG - chr7_3:59124125-59124144 None:intergenic 30.0%
GAGCTTACACAATTAAATTG+TGG - chr7_3:59124304-59124323 None:intergenic 30.0%
!!! GTTTTTGGTCCCTATAAAAT+TGG - chr7_3:59124575-59124594 None:intergenic 30.0%
AGTATCTATACAAAACTCCA+CGG + chr7_3:59124643-59124662 Msa1112980:intron 30.0%
AGAGATGTAGAAAATAGTGA+TGG - chr7_3:59124750-59124769 None:intergenic 30.0%
!! TTGATCATTTTTCACGAGTT+TGG - chr7_3:59124881-59124900 None:intergenic 30.0%
AAACATCGAAGACTGAAAAA+GGG - chr7_3:59124964-59124983 None:intergenic 30.0%
AAAACATCGAAGACTGAAAA+AGG - chr7_3:59124965-59124984 None:intergenic 30.0%
!! TTTTTCAGTCTTCGATGTTT+TGG + chr7_3:59124964-59124983 Msa1112980:intron 30.0%
CTTGATCCATAAATTTGCAT+TGG + chr7_3:59125059-59125078 Msa1112980:intron 30.0%
!! AACTGTATTTGCTTTAGAAG+AGG - chr7_3:59125236-59125255 None:intergenic 30.0%
!! TATTCATTAATGGTGGTGGT+GGG - chr7_3:59121914-59121933 None:intergenic 35.0%
!! ATATTCATTAATGGTGGTGG+TGG - chr7_3:59121915-59121934 None:intergenic 35.0%
GATGGGATATTCATTAATGG+TGG - chr7_3:59121921-59121940 None:intergenic 35.0%
!! GGTGATGGGATATTCATTAA+TGG - chr7_3:59121924-59121943 None:intergenic 35.0%
!!! TGTTTTGAGTTTGTGGTGAT+GGG - chr7_3:59121938-59121957 None:intergenic 35.0%
!!! TTGTTTTGAGTTTGTGGTGA+TGG - chr7_3:59121939-59121958 None:intergenic 35.0%
!!! GTGTTGTTGTTTTGAGTTTG+TGG - chr7_3:59121945-59121964 None:intergenic 35.0%
CTTGATCTTGTGATTCCAAA+GGG - chr7_3:59122007-59122026 None:intergenic 35.0%
!! AACAACAATAGCTTGCTTGT+TGG + chr7_3:59122068-59122087 Msa1112980:CDS 35.0%
!! ACAACAATAGCTTGCTTGTT+GGG + chr7_3:59122069-59122088 Msa1112980:CDS 35.0%
AGAAAAGGGAAACAAGTTAG+AGG + chr7_3:59122199-59122218 Msa1112980:CDS 35.0%
GAAACAAGTTAGAGGAGAAA+AGG + chr7_3:59122207-59122226 Msa1112980:CDS 35.0%
!! AAAAGACAACAAAAGTGCCA+AGG + chr7_3:59122249-59122268 Msa1112980:CDS 35.0%
!! TTTTGGATGATGGTTATCGT+TGG + chr7_3:59122303-59122322 Msa1112980:CDS 35.0%
!! CTTCTCTAAAATTGTAGGAC+TGG + chr7_3:59122704-59122723 Msa1112980:intron 35.0%
! CTAACTGACTTATCTGCTAT+CGG + chr7_3:59123316-59123335 Msa1112980:intron 35.0%
TTGGTGTGACAGTATATCAT+TGG + chr7_3:59123766-59123785 Msa1112980:intron 35.0%
TACCAACTGAACTAAGCTTA+CGG - chr7_3:59124222-59124241 None:intergenic 35.0%
! TAAGCTTAGTTCAGTTGGTA+GGG + chr7_3:59124222-59124241 Msa1112980:intron 35.0%
! TGTAGAAAATAGTGATGGAG+AGG - chr7_3:59124745-59124764 None:intergenic 35.0%
TTCCAAAGATACTAGCATTG+TGG + chr7_3:59125151-59125170 Msa1112980:CDS 35.0%
ATTGTGGTGACTACTTATGA+GGG + chr7_3:59125167-59125186 Msa1112980:CDS 35.0%
GGGATATTCATTAATGGTGG+TGG - chr7_3:59121918-59121937 None:intergenic 40.0%
! AAAGAAGGCGTGAAGAAGAA+GGG - chr7_3:59121975-59121994 None:intergenic 40.0%
! TAAAGAAGGCGTGAAGAAGA+AGG - chr7_3:59121976-59121995 None:intergenic 40.0%
CCTTGATCTTGTGATTCCAA+AGG - chr7_3:59122008-59122027 None:intergenic 40.0%
!! CCTTTGGAATCACAAGATCA+AGG + chr7_3:59122005-59122024 Msa1112980:CDS 40.0%
GAATCACAAGATCAAGGTCT+TGG + chr7_3:59122011-59122030 Msa1112980:CDS 40.0%
! AAGGTCTTGGTGATATTGAG+TGG + chr7_3:59122024-59122043 Msa1112980:CDS 40.0%
! AGGTCTTGGTGATATTGAGT+GGG + chr7_3:59122025-59122044 Msa1112980:CDS 40.0%
!! GAGTGGGGAAACTTTTTCTT+AGG + chr7_3:59122041-59122060 Msa1112980:CDS 40.0%
!! CAACAATAGCTTGCTTGTTG+GGG + chr7_3:59122070-59122089 Msa1112980:CDS 40.0%
TTAGAGGAGAAAAGGGTTAG+AGG + chr7_3:59122215-59122234 Msa1112980:CDS 40.0%
! CTTGTCTGAAATGCAAACCT+TGG - chr7_3:59122269-59122288 None:intergenic 40.0%
GGTTATCGTTGGAGGAAATA+TGG + chr7_3:59122314-59122333 Msa1112980:CDS 40.0%
ACCAACTGAACTAAGCTTAC+GGG - chr7_3:59124221-59124240 None:intergenic 40.0%
GTAAGCTTAGTTCAGTTGGT+AGG + chr7_3:59124221-59124240 Msa1112980:intron 40.0%
!!! CTTTTTTTATATGCAGGGGC+CGG + chr7_3:59124251-59124270 Msa1112980:intron 40.0%
!!! TTTTTTTATATGCAGGGGCC+GGG + chr7_3:59124252-59124271 Msa1112980:intron 40.0%
!! TTTTTGGTCAAGTAGCCTAG+TGG - chr7_3:59124330-59124349 None:intergenic 40.0%
!! AGTTGTTGACTTCCTCTCTT+TGG + chr7_3:59125007-59125026 Msa1112980:intron 40.0%
ACTTCCTCTCTTTGGTTGAT+TGG + chr7_3:59125015-59125034 Msa1112980:intron 40.0%
CTTCCTCTCTTTGGTTGATT+GGG + chr7_3:59125016-59125035 Msa1112980:intron 40.0%
CACCACAATGCTAGTATCTT+TGG - chr7_3:59125156-59125175 None:intergenic 40.0%
CATTGTGGTGACTACTTATG+AGG + chr7_3:59125166-59125185 Msa1112980:CDS 40.0%
!! ATTAATGGTGGTGGTGGGTT+TGG - chr7_3:59121909-59121928 None:intergenic 45.0%
! AAGAAGGCGTGAAGAAGAAG+GGG - chr7_3:59121974-59121993 None:intergenic 45.0%
! GGTCTTGGTGATATTGAGTG+GGG + chr7_3:59122026-59122045 Msa1112980:CDS 45.0%
AGGAGAAAAGGGTTAGAGGT+GGG + chr7_3:59122219-59122238 Msa1112980:CDS 45.0%
! TGGATGATGGTTATCGTTGG+AGG + chr7_3:59122306-59122325 Msa1112980:CDS 45.0%
TCAAGAACAGCAAGTATCCC+AGG + chr7_3:59122348-59122367 Msa1112980:CDS 45.0%
CCAACTGAACTAAGCTTACG+GGG - chr7_3:59124220-59124239 None:intergenic 45.0%
!!! TTTTTTATATGCAGGGGCCG+GGG + chr7_3:59124253-59124272 Msa1112980:intron 45.0%
! TTGTGGAGAAGTAGAGTGTC+CGG - chr7_3:59124287-59124306 None:intergenic 45.0%
! TTGTGTAAGCTCTAGCCACT+AGG + chr7_3:59124312-59124331 Msa1112980:intron 45.0%
GAGATAACACTAAGCTACCG+TGG - chr7_3:59124663-59124682 None:intergenic 45.0%
GATCCCAATCAACCAAAGAG+AGG - chr7_3:59125022-59125041 None:intergenic 45.0%
CACATGCAACGTGAAGAAAC+AGG + chr7_3:59125118-59125137 Msa1112980:CDS 45.0%
ACGTGAAGAAACAGGTGCAA+AGG + chr7_3:59125126-59125145 Msa1112980:CDS 45.0%
TTTCCATCAGCTTCTCGCAT+GGG - chr7_3:59125205-59125224 None:intergenic 45.0%
!!! TTAAATATGAATTTTTTTTT+TGG - chr7_3:59124346-59124365 None:intergenic 5.0%
! CTTGCTTGTTGGGGATGCTA+AGG + chr7_3:59122079-59122098 Msa1112980:CDS 50.0%
GAGGAGAAAAGGGTTAGAGG+TGG + chr7_3:59122218-59122237 Msa1112980:CDS 50.0%
CCCCGTAAGCTTAGTTCAGT+TGG + chr7_3:59124217-59124236 Msa1112980:intron 50.0%
! TGTGGAGAAGTAGAGTGTCC+GGG - chr7_3:59124286-59124305 None:intergenic 50.0%
GTTTCCATCAGCTTCTCGCA+TGG - chr7_3:59125206-59125225 None:intergenic 50.0%
!! ATGGTGGTGGTGGGTTTGGT+GGG - chr7_3:59121905-59121924 None:intergenic 55.0%
!! AATGGTGGTGGTGGGTTTGG+TGG - chr7_3:59121906-59121925 None:intergenic 55.0%
! GTGGAGAAGTAGAGTGTCCG+GGG - chr7_3:59124285-59124304 None:intergenic 55.0%
!! GTGGTGGGTTTGGTGGGTCT+TGG - chr7_3:59121899-59121918 None:intergenic 60.0%
CCATCAGCTTCTCGCATGGG+TGG - chr7_3:59125202-59125221 None:intergenic 60.0%
CCACCCATGCGAGAAGCTGA+TGG + chr7_3:59125199-59125218 Msa1112980:CDS 60.0%
AGTGTCCGGGGTTCGAACCC+CGG - chr7_3:59124273-59124292 None:intergenic 65.0%
AGGGGCCGGGGTTCGAACCC+CGG + chr7_3:59124265-59124284 Msa1112980:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 59121888 59125271 59121888 ID=Msa1112980;Name=Msa1112980
chr7_3 mRNA 59121888 59125271 59121888 ID=Msa1112980-mRNA-1;Parent=Msa1112980;Name=Msa1112980-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0|1|0|0.5|2|0|219
chr7_3 exon 59121888 59122369 59121888 ID=Msa1112980-mRNA-1:exon:13035;Parent=Msa1112980-mRNA-1
chr7_3 exon 59125094 59125271 59125094 ID=Msa1112980-mRNA-1:exon:13036;Parent=Msa1112980-mRNA-1
chr7_3 CDS 59121888 59122369 59121888 ID=Msa1112980-mRNA-1:cds;Parent=Msa1112980-mRNA-1
chr7_3 CDS 59125094 59125271 59125094 ID=Msa1112980-mRNA-1:cds;Parent=Msa1112980-mRNA-1
Gene Sequence

>Msa1112980

ATGGATAGCCAAGACCCACCAAACCCACCACCACCATTAATGAATATCCCATCACCACAAACTCAAAACAACAACACTTCTCTCCCCTTCTTCTTCACGCCTTCTTTACAAAATTACCCTTTGGAATCACAAGATCAAGGTCTTGGTGATATTGAGTGGGGAAACTTTTTCTTAGGTCAAAACAACAATAGCTTGCTTGTTGGGGATGCTAAGGAGACATTAAAGATTGACAATATTCAACAATGCACTTCATCTTCTTCTAATTTGGTAATTCAAAATAATGAAAGTGGGAGTTATCAACTACATGAAGAAGAAAAGGGAAACAAGTTAGAGGAGAAAAGGGTTAGAGGTGGGAGAGTGAAAAAGACAACAAAAGTGCCAAGGTTTGCATTTCAGACAAGAAGTGTTGATGATATTTTGGATGATGGTTATCGTTGGAGGAAATATGGACAAAAAGCTGTCAAGAACAGCAAGTATCCCAGAAGCTACTATCGATGCACACATCACACATGCAACGTGAAGAAACAGGTGCAAAGGCTTTCCAAAGATACTAGCATTGTGGTGACTACTTATGAGGGAATTCACAACCACCCATGCGAGAAGCTGATGGAAACTCTAACTCCTCTTCTAAAGCAAATACAGTTTCTTGCTAGCTTGTAA
Protein sequence

>Msa1112980

MDSQDPPNPPPPLMNIPSPQTQNNNTSLPFFFTPSLQNYPLESQDQGLGDIEWGNFFLGQNNNSLLVGDAKETLKIDNIQQCTSSSSNLVIQNNESGSYQLHEEEKGNKLEEKRVRGGRVKKTTKVPRFAFQTRSVDDILDDGYRWRKYGQKAVKNSKYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLASL*