Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1116540 | AES81523.1 | 55.556 | 72 | 19 | 2 | 42 | 100 | 78 | 149 | 5.29e-12 | 73.9 |
| Msa1116540 | AES81523.1 | 67.196 | 189 | 31 | 4 | 98 | 283 | 1 | 161 | 1.31e-65 | 212 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1116540 | G7KWB3 | 55.556 | 72 | 19 | 2 | 42 | 100 | 78 | 149 | 2.53e-12 | 73.9 |
| Msa1116540 | G7KWB3 | 67.196 | 189 | 31 | 4 | 98 | 283 | 1 | 161 | 6.23e-66 | 212 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1116540 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1116540 | MtrunA17_Chr7g0258981 | 67.196 | 189 | 31 | 4 | 98 | 283 | 1 | 161 | 1.20e-69 | 212 |
| Msa1116540 | MtrunA17_Chr7g0258981 | 55.556 | 72 | 19 | 2 | 42 | 100 | 78 | 149 | 4.86e-16 | 73.9 |
| Msa1116540 | MtrunA17_Chr3g0080591 | 51.020 | 98 | 34 | 4 | 1 | 87 | 1 | 95 | 8.57e-19 | 80.5 |
| Msa1116540 | MtrunA17_Chr3g0080591 | 40.769 | 130 | 49 | 4 | 168 | 272 | 8 | 134 | 1.42e-16 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 72 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATAATATTGATGGATCTT+TGG | 0.189029 | 7_3:-64216225 | Msa1116540:CDS |
| AATAATATTGATGGATCTTT+GGG | 0.232329 | 7_3:-64216224 | Msa1116540:CDS |
| AAACTGCACAAGATCTTTCT+TGG | 0.245892 | 7_3:-64216505 | Msa1116540:CDS |
| TAAAGACGAGTAGGGAAAAT+TGG | 0.289389 | 7_3:+64222317 | None:intergenic |
| CGACCTTGATTTGAAGCTTT+AGG | 0.290526 | 7_3:-64216102 | None:intergenic |
| ACACAATTTGCAACATAAAT+CGG | 0.316739 | 7_3:-64216469 | Msa1116540:CDS |
| TGTGAAAATTGTGGTGTTGC+TGG | 0.325919 | 7_3:+64222467 | None:intergenic |
| CATGATTACAATAATATTGA+TGG | 0.344856 | 7_3:-64216233 | Msa1116540:CDS |
| ACCGCTGGTAATTCTTCAAT+TGG | 0.376621 | 7_3:+64216152 | None:intergenic |
| TGTAAATCTTGTGATGTTGT+TGG | 0.389716 | 7_3:+64216404 | None:intergenic |
| CACAATTTGCAACATAAATC+GGG | 0.419218 | 7_3:-64216468 | Msa1116540:CDS |
| TGTGATGAAGGTGGTGGAGA+TGG | 0.423532 | 7_3:+64216353 | None:intergenic |
| AAAATTGGAATCTCTGGTAT+AGG | 0.429793 | 7_3:+64222332 | None:intergenic |
| ACAATTGGAACCTCTGGTAT+AGG | 0.433089 | 7_3:+64216269 | None:intergenic |
| GTAGGGAAAATTGGAATCTC+TGG | 0.436918 | 7_3:+64222326 | None:intergenic |
| CAACCTAAAGCTTCAAATCA+AGG | 0.460309 | 7_3:+64216099 | None:intergenic |
| TGCTCCAATGGAGGAACGAC+TGG | 0.478203 | 7_3:-64222222 | Msa1116540:CDS |
| TGACGAGTACGAGAGACAAT+TGG | 0.479925 | 7_3:+64216254 | None:intergenic |
| TGAGATGAAGGTGGTGGTAG+TGG | 0.484354 | 7_3:+64222416 | None:intergenic |
| CGAGAGACAATTGGAACCTC+TGG | 0.486624 | 7_3:+64216263 | None:intergenic |
| ACCACCAGTCGTTCCTCCAT+TGG | 0.488135 | 7_3:+64222218 | None:intergenic |
| TCTTTCTTTGATTGACAAGC+CGG | 0.490146 | 7_3:-64222252 | Msa1116540:CDS |
| AAGAATTACCAGCGGTCTGG+TGG | 0.491691 | 7_3:-64216145 | Msa1116540:CDS |
| TCAATTGGAGCAGAATCAAT+CGG | 0.499372 | 7_3:+64216167 | None:intergenic |
| TTGAAGAATTACCAGCGGTC+TGG | 0.500257 | 7_3:-64216148 | Msa1116540:CDS |
| GCCGGCTGATCTTGCTCCAA+TGG | 0.502269 | 7_3:-64222234 | Msa1116540:CDS |
| TCCATTGGAGCAAGATCAGC+CGG | 0.503676 | 7_3:+64222233 | None:intergenic |
| CACACTATGTTTCCCATGCA+TGG | 0.504244 | 7_3:-64222395 | Msa1116540:CDS |
| ACCATGTTGTTTCCTATGCA+TGG | 0.506943 | 7_3:-64216329 | Msa1116540:CDS |
| TGCAAATTGTGTATGAGCTT+CGG | 0.508830 | 7_3:+64216480 | None:intergenic |
| TCTGGTATAGGCCTCATGTA+TGG | 0.510085 | 7_3:+64222344 | None:intergenic |
| AACCTCTGGTATAGGCCTCA+TGG | 0.524083 | 7_3:+64216277 | None:intergenic |
| TTACCAGCGGTCTGGTGGGA+TGG | 0.524380 | 7_3:-64216140 | Msa1116540:CDS |
| GTTGGTATGAATGTTTGTGA+TGG | 0.529752 | 7_3:+64216422 | None:intergenic |
| TGATTGCATCGAAATTCGAT+TGG | 0.532720 | 7_3:+64216545 | None:intergenic |
| ATAATTACCACGTCCATGCA+TGG | 0.540019 | 7_3:+64222382 | None:intergenic |
| TTTCCATCCCACCAGACCGC+TGG | 0.540570 | 7_3:+64216137 | None:intergenic |
| CGACTGGTGGTGTTGAGTGA+TGG | 0.544769 | 7_3:-64222206 | Msa1116540:intron |
| AGATCTTCTTTGTACCACAT+TGG | 0.545928 | 7_3:-64216380 | Msa1116540:CDS |
| AACAACATGGTGTGTGATGA+AGG | 0.556950 | 7_3:+64216341 | None:intergenic |
| TGGATCTTTGGGGAGAACAA+TGG | 0.571321 | 7_3:-64216213 | Msa1116540:CDS |
| TGTTATGGTAAAGACGAGTA+GGG | 0.574420 | 7_3:+64222309 | None:intergenic |
| ATGTTTCCCATGCATGGACG+TGG | 0.575400 | 7_3:-64222389 | Msa1116540:CDS |
| TTGTTTCCTATGCATGGAAG+TGG | 0.582090 | 7_3:-64216323 | Msa1116540:CDS |
| TAGGCCTCATGGATGGATGA+AGG | 0.586352 | 7_3:+64216288 | None:intergenic |
| GGAAACATAGTGTGAGATGA+AGG | 0.586864 | 7_3:+64222404 | None:intergenic |
| TAATTACCACTTCCATGCAT+AGG | 0.590506 | 7_3:+64216317 | None:intergenic |
| TAATTACCACGTCCATGCAT+GGG | 0.591314 | 7_3:+64222383 | None:intergenic |
| AAAACTCTTTGTGAAAATTG+TGG | 0.591357 | 7_3:+64222458 | None:intergenic |
| GTTAGAGTAAGAACAAGAGT+AGG | 0.594186 | 7_3:+64216569 | None:intergenic |
| GATGAAGGTGGTGGAGATGG+TGG | 0.599841 | 7_3:+64216356 | None:intergenic |
| TCTGGTATAGGCCTCATGGA+TGG | 0.600026 | 7_3:+64216281 | None:intergenic |
| GATGAAGGTGGTGGTAGTGG+TGG | 0.600039 | 7_3:+64222419 | None:intergenic |
| GGCTGATCTTGCTCCAATGG+AGG | 0.602414 | 7_3:-64222231 | Msa1116540:CDS |
| GAAAATTGTGGTGTTGCTGG+TGG | 0.610901 | 7_3:+64222470 | None:intergenic |
| TCATGTATGGACGAAAGCGA+CGG | 0.619121 | 7_3:+64222357 | None:intergenic |
| GTGGAGATGGTGGTCCAATG+TGG | 0.620516 | 7_3:+64216366 | None:intergenic |
| GTCGCTTTCGTCCATACATG+AGG | 0.623718 | 7_3:-64222355 | Msa1116540:CDS |
| ATCCATGAGGCCTATACCAG+AGG | 0.624967 | 7_3:-64216279 | Msa1116540:CDS |
| AGAATTACCAGCGGTCTGGT+GGG | 0.635470 | 7_3:-64216144 | Msa1116540:CDS |
| ATAGTGTGAGATGAAGGTGG+TGG | 0.665632 | 7_3:+64222410 | None:intergenic |
| TCCAATGGAGGAACGACTGG+TGG | 0.666252 | 7_3:-64222219 | Msa1116540:CDS |
| ATAATATTGATGGATCTTTG+GGG | 0.673989 | 7_3:-64216223 | Msa1116540:CDS |
| GTGGTAGTGGTGGTCCATTG+CGG | 0.679358 | 7_3:+64222429 | None:intergenic |
| ATGGTGTGTGATGAAGGTGG+TGG | 0.684137 | 7_3:+64216347 | None:intergenic |
| TCCAATTGAAGAATTACCAG+CGG | 0.686028 | 7_3:-64216153 | Msa1116540:CDS |
| AACATAGTGTGAGATGAAGG+TGG | 0.688373 | 7_3:+64222407 | None:intergenic |
| GGTGGTATGAATGTTGTCAA+CGG | 0.693608 | 7_3:+64222488 | None:intergenic |
| GCCTCATGGATGGATGAAGG+TGG | 0.701559 | 7_3:+64216291 | None:intergenic |
| ACCACCTTCATCCATCCATG+AGG | 0.719012 | 7_3:-64216292 | Msa1116540:CDS |
| TCCATGCATAGGAAACAACA+TGG | 0.729158 | 7_3:+64216328 | None:intergenic |
| AACATGGTGTGTGATGAAGG+TGG | 0.787924 | 7_3:+64216344 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+GGG | + | chr7_3:64218505-64218524 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | + | chr7_3:64218506-64218525 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | - | chr7_3:64218505-64218524 | Msa1116540:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | - | chr7_3:64218506-64218525 | Msa1116540:intron | 0.0% |
| !!! | TTTTTTTTCTTTATTTTTCA+AGG | - | chr7_3:64217524-64217543 | Msa1116540:intron | 10.0% |
| !!! | TTTTTTTCTTTATTTTTCAA+GGG | - | chr7_3:64217525-64217544 | Msa1116540:intron | 10.0% |
| !!! | TTTTTTTGCTAATAAAAAAA+AGG | - | chr7_3:64217634-64217653 | Msa1116540:intron | 10.0% |
| !! | TTAATTAGAATATAAACAAA+AGG | - | chr7_3:64218403-64218422 | Msa1116540:intron | 10.0% |
| !! | TAATTAGAATATAAACAAAA+GGG | - | chr7_3:64218404-64218423 | Msa1116540:intron | 10.0% |
| !! | AGTAAATATATATATATATG+GGG | + | chr7_3:64218841-64218860 | None:intergenic | 10.0% |
| !!! | ATATTTACTAACTTTTTTTA+AGG | - | chr7_3:64218852-64218871 | Msa1116540:intron | 10.0% |
| !! | TTTATTATAAATTTCATGAT+TGG | - | chr7_3:64218920-64218939 | Msa1116540:intron | 10.0% |
| !!! | TTTTTTTTAAGAAATCAAAA+TGG | + | chr7_3:64219092-64219111 | None:intergenic | 10.0% |
| !!! | ATAAAGAAAATACATATTTT+TGG | - | chr7_3:64220375-64220394 | Msa1116540:intron | 10.0% |
| !!! | TAAAGAAAATACATATTTTT+GGG | - | chr7_3:64220376-64220395 | Msa1116540:intron | 10.0% |
| !!! | TAAAATTAACTATTTTTTAG+GGG | + | chr7_3:64220840-64220859 | None:intergenic | 10.0% |
| !!! | CTAAAATTAACTATTTTTTA+GGG | + | chr7_3:64220841-64220860 | None:intergenic | 10.0% |
| !!! | ACTAAAATTAACTATTTTTT+AGG | + | chr7_3:64220842-64220861 | None:intergenic | 10.0% |
| !! | TATCAAAATACAAATTTAAA+AGG | - | chr7_3:64221568-64221587 | Msa1116540:intron | 10.0% |
| !! | ATATATATAGGAATTAATTA+GGG | + | chr7_3:64221786-64221805 | None:intergenic | 10.0% |
| !! | TATATATATAGGAATTAATT+AGG | + | chr7_3:64221787-64221806 | None:intergenic | 10.0% |
| !!! | TTCCTATATATATATTTTTT+TGG | - | chr7_3:64221793-64221812 | Msa1116540:intron | 10.0% |
| !! | AACCAAAAAAATATATATAT+AGG | + | chr7_3:64221798-64221817 | None:intergenic | 10.0% |
| !!! | ATGGTTTTATAATTATGTAA+TGG | - | chr7_3:64216522-64216541 | Msa1116540:CDS | 15.0% |
| !!! | TGGTTTTATAATTATGTAAT+GGG | - | chr7_3:64216523-64216542 | Msa1116540:CDS | 15.0% |
| !!! | TTTTTGTTTTGATTTTCATT+AGG | - | chr7_3:64216583-64216602 | Msa1116540:CDS | 15.0% |
| !!! | TTTTGTTTTGATTTTCATTA+GGG | - | chr7_3:64216584-64216603 | Msa1116540:CDS | 15.0% |
| !!! | TTTGATTAATGAAATGTTTT+AGG | - | chr7_3:64216743-64216762 | Msa1116540:intron | 15.0% |
| !!! | TTGATTAATGAAATGTTTTA+GGG | - | chr7_3:64216744-64216763 | Msa1116540:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | + | chr7_3:64217230-64217249 | None:intergenic | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | chr7_3:64217229-64217248 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | + | chr7_3:64217138-64217157 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | - | chr7_3:64217038-64217057 | Msa1116540:intron | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | - | chr7_3:64217229-64217248 | Msa1116540:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | - | chr7_3:64217230-64217249 | Msa1116540:intron | 15.0% |
| !!! | TTTTTTCTTTATTTTTCAAG+GGG | - | chr7_3:64217526-64217545 | Msa1116540:intron | 15.0% |
| !!! | TCATAAAAACTTATTTGTTT+TGG | + | chr7_3:64217706-64217725 | None:intergenic | 15.0% |
| !! | TAGACAAAATTAATATTTGA+AGG | - | chr7_3:64217774-64217793 | Msa1116540:intron | 15.0% |
| !!! | ATTTTGCTTATAATAGTAAT+CGG | + | chr7_3:64217861-64217880 | None:intergenic | 15.0% |
| !!! | TATATGACTTGTTTATTTTA+CGG | - | chr7_3:64218013-64218032 | Msa1116540:intron | 15.0% |
| !! | ATAATATTGTATCATATGTA+AGG | + | chr7_3:64218113-64218132 | None:intergenic | 15.0% |
| !!! | ATTATATTTCCTTTTTTTGA+AGG | - | chr7_3:64218128-64218147 | Msa1116540:intron | 15.0% |
| !!! | TTATATTTCCTTTTTTTGAA+GGG | - | chr7_3:64218129-64218148 | Msa1116540:intron | 15.0% |
| !! | CATTTCTATAAGTATTATTA+AGG | - | chr7_3:64218217-64218236 | Msa1116540:intron | 15.0% |
| !!! | AATTTTAAGGAAACAATATT+TGG | + | chr7_3:64218287-64218306 | None:intergenic | 15.0% |
| !!! | GTAATAAAGACAAAATTTTA+AGG | + | chr7_3:64218300-64218319 | None:intergenic | 15.0% |
| !!! | TGTTTTAGTAAATTATAAGT+GGG | - | chr7_3:64218427-64218446 | Msa1116540:intron | 15.0% |
| !! | TTGTTTATAATAGAAAAACA+TGG | - | chr7_3:64218739-64218758 | Msa1116540:intron | 15.0% |
| !! | TGTTTATAATAGAAAAACAT+GGG | - | chr7_3:64218740-64218759 | Msa1116540:intron | 15.0% |
| !! | GTAATTATTGTTTATTTCAA+TGG | - | chr7_3:64219023-64219042 | Msa1116540:intron | 15.0% |
| !! | TATATATATATATGCAAAGA+AGG | - | chr7_3:64219691-64219710 | Msa1116540:intron | 15.0% |
| !! | TATATATAATTCAATTCGTT+TGG | + | chr7_3:64219870-64219889 | None:intergenic | 15.0% |
| !! | AAAAAAATACAAAAAATGAC+CGG | + | chr7_3:64220114-64220133 | None:intergenic | 15.0% |
| !! | TTTATTTAAAGAGAATAAGT+GGG | - | chr7_3:64220164-64220183 | Msa1116540:intron | 15.0% |
| !!! | TGAATTTAATTTAGTTGATA+GGG | + | chr7_3:64220228-64220247 | None:intergenic | 15.0% |
| !!! | AAAGAAAATACATATTTTTG+GGG | - | chr7_3:64220377-64220396 | Msa1116540:intron | 15.0% |
| !! | TATTATATTTGATGTATTGT+TGG | - | chr7_3:64220484-64220503 | Msa1116540:intron | 15.0% |
| !! | TTGAAAAAGATAATTATAGA+TGG | - | chr7_3:64220512-64220531 | Msa1116540:intron | 15.0% |
| !!! | TGGATTTTGATTAAAATTAT+AGG | + | chr7_3:64220567-64220586 | None:intergenic | 15.0% |
| !!! | TAATTTTCATTTTATTTGAC+TGG | + | chr7_3:64220698-64220717 | None:intergenic | 15.0% |
| !! | AAATATACTAGGAATTAATT+AGG | + | chr7_3:64220958-64220977 | None:intergenic | 15.0% |
| !!! | TTAATTCCTAGTATATTTTT+TGG | - | chr7_3:64220960-64220979 | Msa1116540:intron | 15.0% |
| !! | TTTAAACCAAAAAATATACT+AGG | + | chr7_3:64220969-64220988 | None:intergenic | 15.0% |
| !!! | AATTGATTCAATTACAATTT+TGG | - | chr7_3:64221121-64221140 | Msa1116540:intron | 15.0% |
| !! | AAAAAAAATTACATTGCTTT+GGG | + | chr7_3:64221250-64221269 | None:intergenic | 15.0% |
| !! | AAAAAAAAATTACATTGCTT+TGG | + | chr7_3:64221251-64221270 | None:intergenic | 15.0% |
| !!! | AAAACTTGTTCAAAAAAATT+TGG | - | chr7_3:64221474-64221493 | Msa1116540:intron | 15.0% |
| !!! | ATATTTTAACTAGTAGAAAA+TGG | - | chr7_3:64221531-64221550 | Msa1116540:intron | 15.0% |
| !! | TATATATAGGAATTAATTAG+GGG | + | chr7_3:64221785-64221804 | None:intergenic | 15.0% |
| !! | AAAATTCATCAATGTTGTTA+TGG | + | chr7_3:64216330-64216349 | None:intergenic | 20.0% |
| !!! | AACAACATTGATGAATTTTT+AGG | - | chr7_3:64216331-64216350 | Msa1116540:CDS | 20.0% |
| !!! | ACAACATTGATGAATTTTTA+GGG | - | chr7_3:64216332-64216351 | Msa1116540:CDS | 20.0% |
| !!! | GGTTTTATAATTATGTAATG+GGG | - | chr7_3:64216524-64216543 | Msa1116540:CDS | 20.0% |
| !!! | AATTTTGCGATAATTTTTTG+CGG | - | chr7_3:64217073-64217092 | Msa1116540:intron | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | - | chr7_3:64217167-64217186 | Msa1116540:intron | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | - | chr7_3:64217168-64217187 | Msa1116540:intron | 20.0% |
| !! | CTAAATTAAACTCATTTAAG+AGG | + | chr7_3:64217393-64217412 | None:intergenic | 20.0% |
| !!! | TTAAGATGATACTTTTGATA+AGG | + | chr7_3:64217802-64217821 | None:intergenic | 20.0% |
| !!! | ATGAGTGTAAATAATTTTGT+AGG | + | chr7_3:64218200-64218219 | None:intergenic | 20.0% |
| !!! | TATGTCATTGTCTTTTTTTA+AGG | - | chr7_3:64218337-64218356 | Msa1116540:intron | 20.0% |
| !!! | GTGTTTTAGTAAATTATAAG+TGG | - | chr7_3:64218426-64218445 | Msa1116540:intron | 20.0% |
| !! | AAAGTTTAATAGAGACAAAA+GGG | + | chr7_3:64218676-64218695 | None:intergenic | 20.0% |
| !! | TAAAGTTTAATAGAGACAAA+AGG | + | chr7_3:64218677-64218696 | None:intergenic | 20.0% |
| !! | TGCAAAAATATATTGCTTAA+AGG | - | chr7_3:64219611-64219630 | Msa1116540:intron | 20.0% |
| !!! | ATATCTCACCATTTTTTTTA+GGG | - | chr7_3:64220038-64220057 | Msa1116540:intron | 20.0% |
| !!! | CTTTATTTAAAGAGAATAAG+TGG | - | chr7_3:64220163-64220182 | Msa1116540:intron | 20.0% |
| !! | TTATTTAAAGAGAATAAGTG+GGG | - | chr7_3:64220165-64220184 | Msa1116540:intron | 20.0% |
| !!! | GTGAATTTAATTTAGTTGAT+AGG | + | chr7_3:64220229-64220248 | None:intergenic | 20.0% |
| !! | TAGATGGTTACAATATAAAA+TGG | - | chr7_3:64220528-64220547 | Msa1116540:intron | 20.0% |
| !!! | TTTAGTTTTCAAAAAGTTAC+GGG | + | chr7_3:64221177-64221196 | None:intergenic | 20.0% |
| !!! | GTTTAGTTTTCAAAAAGTTA+CGG | + | chr7_3:64221178-64221197 | None:intergenic | 20.0% |
| !! | AAAAAAATTACATTGCTTTG+GGG | + | chr7_3:64221249-64221268 | None:intergenic | 20.0% |
| !! | TTCTATTCAAAATCAAATCT+AGG | + | chr7_3:64221298-64221317 | None:intergenic | 20.0% |
| !! | AATAGAAAATACCAATTTGT+AGG | - | chr7_3:64221311-64221330 | Msa1116540:intron | 20.0% |
| !! | ATGTACATACATTCAATTAA+AGG | - | chr7_3:64221757-64221776 | Msa1116540:intron | 20.0% |
| !! | ATGTAAGATGTATTTATAGA+GGG | + | chr7_3:64221871-64221890 | None:intergenic | 20.0% |
| !! | TTTCAGTGATAAGAAAAAAA+TGG | + | chr7_3:64221960-64221979 | None:intergenic | 20.0% |
| !! | CATGATTACAATAATATTGA+TGG | - | chr7_3:64222388-64222407 | Msa1116540:CDS | 20.0% |
| !!! | AATAATATTGATGGATCTTT+GGG | - | chr7_3:64222397-64222416 | Msa1116540:CDS | 20.0% |
| ! | AAAACTCTTTGTGAAAATTG+TGG | + | chr7_3:64216166-64216185 | None:intergenic | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | + | chr7_3:64216880-64216899 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | + | chr7_3:64216881-64216900 | None:intergenic | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | - | chr7_3:64217201-64217220 | Msa1116540:intron | 25.0% |
| !!! | ATTAACCCAATGTTTTATTC+TGG | - | chr7_3:64217296-64217315 | Msa1116540:intron | 25.0% |
| !!! | TTAACCCAATGTTTTATTCT+GGG | - | chr7_3:64217297-64217316 | Msa1116540:intron | 25.0% |
| !! | GATATGCTTGTTAATTTCTT+TGG | + | chr7_3:64217416-64217435 | None:intergenic | 25.0% |
| ! | AAATTAACAAGCATATCATG+TGG | - | chr7_3:64217419-64217438 | Msa1116540:intron | 25.0% |
| ! | AAATGAATACATCAATGTGT+GGG | - | chr7_3:64217488-64217507 | Msa1116540:intron | 25.0% |
| ! | AAAAAAAGGAGAATGTTAAC+CGG | - | chr7_3:64217648-64217667 | Msa1116540:intron | 25.0% |
| !!! | AACTTATTTGTTTTGGTCTT+TGG | + | chr7_3:64217699-64217718 | None:intergenic | 25.0% |
| !!! | ATCGGATGAAGTATTTTTTA+TGG | + | chr7_3:64217843-64217862 | None:intergenic | 25.0% |
| ! | TTGATGGAAAATGATGTAAT+TGG | - | chr7_3:64218043-64218062 | Msa1116540:intron | 25.0% |
| ! | AATATTGTCCCTTCAAAAAA+AGG | + | chr7_3:64218140-64218159 | None:intergenic | 25.0% |
| !! | ATATTTGGAATGATGAAAGT+GGG | + | chr7_3:64218272-64218291 | None:intergenic | 25.0% |
| !! | AATATTTGGAATGATGAAAG+TGG | + | chr7_3:64218273-64218292 | None:intergenic | 25.0% |
| ! | AAAAGACAATGACATACTTA+AGG | + | chr7_3:64218333-64218352 | None:intergenic | 25.0% |
| !!! | TGTTTTAGTAAAGTACAAGT+AGG | + | chr7_3:64218653-64218672 | None:intergenic | 25.0% |
| !!! | TGTTTTGGTAAATAACTAGT+AGG | - | chr7_3:64218763-64218782 | Msa1116540:intron | 25.0% |
| ! | TGTACATAATTTCATGTAGT+AGG | + | chr7_3:64219984-64220003 | None:intergenic | 25.0% |
| ! | CTAAAAAAAATGGTGAGATA+TGG | + | chr7_3:64220039-64220058 | None:intergenic | 25.0% |
| !!! | CATATCTCACCATTTTTTTT+AGG | - | chr7_3:64220037-64220056 | Msa1116540:intron | 25.0% |
| !!! | TATCTCACCATTTTTTTTAG+GGG | - | chr7_3:64220039-64220058 | Msa1116540:intron | 25.0% |
| !!! | TTTTTTGTCAAGTAGTCTAT+TGG | - | chr7_3:64220129-64220148 | Msa1116540:intron | 25.0% |
| ! | TTCGTGAAAATTAATATGGT+TGG | + | chr7_3:64220286-64220305 | None:intergenic | 25.0% |
| ! | AAGGTTCGTGAAAATTAATA+TGG | + | chr7_3:64220290-64220309 | None:intergenic | 25.0% |
| !!! | ATTTTATTTCACTCGTGAAA+AGG | - | chr7_3:64221151-64221170 | Msa1116540:intron | 25.0% |
| ! | AAAAAATTACATTGCTTTGG+GGG | + | chr7_3:64221248-64221267 | None:intergenic | 25.0% |
| ! | TTTATTTGATAAGTCATGCT+TGG | + | chr7_3:64221432-64221451 | None:intergenic | 25.0% |
| ! | TGTAAGATGTATTTATAGAG+GGG | + | chr7_3:64221870-64221889 | None:intergenic | 25.0% |
| ! | GATGTAAGATGTATTTATAG+AGG | + | chr7_3:64221872-64221891 | None:intergenic | 25.0% |
| ! | AAATACATCTTACATCTCAA+AGG | - | chr7_3:64221876-64221895 | Msa1116540:intron | 25.0% |
| ! | ACACAATTTGCAACATAAAT+CGG | - | chr7_3:64222152-64222171 | Msa1116540:intron | 25.0% |
| !! | CAATAATATTGATGGATCTT+TGG | - | chr7_3:64222396-64222415 | Msa1116540:CDS | 25.0% |
| !! | ATAATATTGATGGATCTTTG+GGG | - | chr7_3:64222398-64222417 | Msa1116540:CDS | 25.0% |
| AAAATTGGAATCTCTGGTAT+AGG | + | chr7_3:64216292-64216311 | None:intergenic | 30.0% | |
| !! | TGAATTTTTAGGGAGAGAAT+TGG | - | chr7_3:64216342-64216361 | Msa1116540:CDS | 30.0% |
| !! | AGTGATGGTTTGTTTGAAAT+GGG | - | chr7_3:64216430-64216449 | Msa1116540:CDS | 30.0% |
| !! | TTGTTTTACAGAGACATTGT+TGG | - | chr7_3:64216616-64216635 | Msa1116540:CDS | 30.0% |
| GTTGGACTTAATTATTGTCA+AGG | - | chr7_3:64216634-64216653 | Msa1116540:CDS | 30.0% | |
| CAAAACTAATCAAAAGACAG+AGG | + | chr7_3:64216685-64216704 | None:intergenic | 30.0% | |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | chr7_3:64217261-64217280 | None:intergenic | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | chr7_3:64217260-64217279 | None:intergenic | 30.0% |
| AAGTAGGGACTAAATTTACA+AGG | + | chr7_3:64216803-64216822 | None:intergenic | 30.0% | |
| CAGTGCAGAAAAACAAAATT+AGG | - | chr7_3:64217200-64217219 | Msa1116540:intron | 30.0% | |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr7_3:64217260-64217279 | Msa1116540:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr7_3:64217261-64217280 | Msa1116540:intron | 30.0% |
| TAGACCCAGAATAAAACATT+GGG | + | chr7_3:64217304-64217323 | None:intergenic | 30.0% | |
| TTAGACCCAGAATAAAACAT+TGG | + | chr7_3:64217305-64217324 | None:intergenic | 30.0% | |
| ! | AAACTGAGGTTTTCAATGAA+AGG | - | chr7_3:64217450-64217469 | Msa1116540:intron | 30.0% |
| ! | AACTGAGGTTTTCAATGAAA+GGG | - | chr7_3:64217451-64217470 | Msa1116540:intron | 30.0% |
| CAATGAAAGGGAAAACAAAT+TGG | - | chr7_3:64217463-64217482 | Msa1116540:intron | 30.0% | |
| CAAATGAATACATCAATGTG+TGG | - | chr7_3:64217487-64217506 | Msa1116540:intron | 30.0% | |
| AGAACATGCGTTGTTATATA+CGG | + | chr7_3:64217587-64217606 | None:intergenic | 30.0% | |
| ATGTTTAACCAATATCCATG+GGG | + | chr7_3:64217676-64217695 | None:intergenic | 30.0% | |
| GATGTTTAACCAATATCCAT+GGG | + | chr7_3:64217677-64217696 | None:intergenic | 30.0% | |
| ATCTTAATTGATGTACTCAC+CGG | + | chr7_3:64217992-64218011 | None:intergenic | 30.0% | |
| ! | ATAGAAAAACATGGGTGTTT+TGG | - | chr7_3:64218748-64218767 | Msa1116540:intron | 30.0% |
| CATTACCCAAACAATGAAAA+GGG | + | chr7_3:64218954-64218973 | None:intergenic | 30.0% | |
| !! | ACCGTTAAATTGCTTTTATG+TGG | - | chr7_3:64219312-64219331 | Msa1116540:intron | 30.0% |
| GCCACATAAAAGCAATTTAA+CGG | + | chr7_3:64219316-64219335 | None:intergenic | 30.0% | |
| TTATGTACACTAGTTACATC+AGG | - | chr7_3:64219995-64220014 | Msa1116540:intron | 30.0% | |
| AAAAATGGTGAGATATGGTT+GGG | + | chr7_3:64220034-64220053 | None:intergenic | 30.0% | |
| AAAAAATGGTGAGATATGGT+TGG | + | chr7_3:64220035-64220054 | None:intergenic | 30.0% | |
| AGATATGCCCCTAAAAAAAA+TGG | + | chr7_3:64220049-64220068 | None:intergenic | 30.0% | |
| ! | ATTTGTCCCTTTGTTATGTA+AGG | - | chr7_3:64220074-64220093 | Msa1116540:intron | 30.0% |
| ! | TTTGTCCCTTTGTTATGTAA+GGG | - | chr7_3:64220075-64220094 | Msa1116540:intron | 30.0% |
| CATAATATATACAGGAGTTG+AGG | + | chr7_3:64220199-64220218 | None:intergenic | 30.0% | |
| GGACATTGCATAATATATAC+AGG | + | chr7_3:64220207-64220226 | None:intergenic | 30.0% | |
| TTAGTGCAAAATGGAAGAAA+AGG | + | chr7_3:64220309-64220328 | None:intergenic | 30.0% | |
| GAAGAAAGTTTAGTGCAAAA+TGG | + | chr7_3:64220318-64220337 | None:intergenic | 30.0% | |
| !!! | GAAAATACATATTTTTGGGG+TGG | - | chr7_3:64220380-64220399 | Msa1116540:intron | 30.0% |
| CAATAAAAATAGCCAACAGA+CGG | - | chr7_3:64220650-64220669 | Msa1116540:intron | 30.0% | |
| AATAAAAATAGCCAACAGAC+GGG | - | chr7_3:64220651-64220670 | Msa1116540:intron | 30.0% | |
| CATAATTGTAAGATAACCGA+GGG | + | chr7_3:64221209-64221228 | None:intergenic | 30.0% | |
| ! | AAAAATTACATTGCTTTGGG+GGG | + | chr7_3:64221247-64221266 | None:intergenic | 30.0% |
| TTCCTCAAAACTAGTCATTT+AGG | - | chr7_3:64221270-64221289 | Msa1116540:intron | 30.0% | |
| TCCTCAAAACTAGTCATTTA+GGG | - | chr7_3:64221271-64221290 | Msa1116540:intron | 30.0% | |
| ! | TAAAGTTGACAGCGAATTTT+AGG | + | chr7_3:64221337-64221356 | None:intergenic | 30.0% |
| TGAATGCATGTACATGTAAT+GGG | + | chr7_3:64221723-64221742 | None:intergenic | 30.0% | |
| TTGAATGCATGTACATGTAA+TGG | + | chr7_3:64221724-64221743 | None:intergenic | 30.0% | |
| TAAGATGTATTTATAGAGGG+GGG | + | chr7_3:64221868-64221887 | None:intergenic | 30.0% | |
| GTAAGATGTATTTATAGAGG+GGG | + | chr7_3:64221869-64221888 | None:intergenic | 30.0% | |
| CACAATTTGCAACATAAATC+GGG | - | chr7_3:64222153-64222172 | Msa1116540:intron | 30.0% | |
| TGTAAATCTTGTGATGTTGT+TGG | + | chr7_3:64222220-64222239 | None:intergenic | 30.0% | |
| !!! | ACGGTGTGTTGTTTTCATTT+TGG | + | chr7_3:64216117-64216136 | None:intergenic | 35.0% |
| TAAAGACGAGTAGGGAAAAT+TGG | + | chr7_3:64216307-64216326 | None:intergenic | 35.0% | |
| TGTTATGGTAAAGACGAGTA+GGG | + | chr7_3:64216315-64216334 | None:intergenic | 35.0% | |
| TTGTTATGGTAAAGACGAGT+AGG | + | chr7_3:64216316-64216335 | None:intergenic | 35.0% | |
| TCTTTCTTTGATTGACAAGC+CGG | - | chr7_3:64216369-64216388 | Msa1116540:CDS | 35.0% | |
| !! | GAGTGATGGTTTGTTTGAAA+TGG | - | chr7_3:64216429-64216448 | Msa1116540:CDS | 35.0% |
| ! | CTACCATGATTTGAAACTCT+AGG | - | chr7_3:64216492-64216511 | Msa1116540:CDS | 35.0% |
| CAACCTAGAGTTTCAAATCA+TGG | + | chr7_3:64216498-64216517 | None:intergenic | 35.0% | |
| !! | TGAAACTCTAGGTTGATCTA+TGG | - | chr7_3:64216503-64216522 | Msa1116540:CDS | 35.0% |
| CAAGATTAGAACACTACGAA+AGG | - | chr7_3:64216943-64216962 | Msa1116540:intron | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | - | chr7_3:64217245-64217264 | Msa1116540:intron | 35.0% | |
| AACATGCGTTGTTATATACG+GGG | + | chr7_3:64217585-64217604 | None:intergenic | 35.0% | |
| GAACATGCGTTGTTATATAC+GGG | + | chr7_3:64217586-64217605 | None:intergenic | 35.0% | |
| TGTTCTTGTCAACTGAACTA+CGG | - | chr7_3:64217601-64217620 | Msa1116540:intron | 35.0% | |
| GGATGTTTAACCAATATCCA+TGG | + | chr7_3:64217678-64217697 | None:intergenic | 35.0% | |
| ! | ATTTTGCTTGTAACAGTGAC+CGG | - | chr7_3:64217970-64217989 | Msa1116540:intron | 35.0% |
| ! | ATTTTACGGCAGTTTCTTGA+TGG | - | chr7_3:64218027-64218046 | Msa1116540:intron | 35.0% |
| AAGTGGGTGTAAATTAGTGA+AGG | + | chr7_3:64218256-64218275 | None:intergenic | 35.0% | |
| ! | ACTTGCACCTTAGTGTTTTT+AGG | - | chr7_3:64218462-64218481 | Msa1116540:intron | 35.0% |
| ! | ACTTGCACCTTAGTGTTTTT+AGG | + | chr7_3:64218462-64218481 | None:intergenic | 35.0% |
| ! | ACTTGCACCTTAGTGTTTTT+AGG | - | chr7_3:64218462-64218481 | Msa1116540:intron | 35.0% |
| ! | CAGAACCCTTTTCATTGTTT+GGG | - | chr7_3:64218946-64218965 | Msa1116540:intron | 35.0% |
| CCATTACCCAAACAATGAAA+AGG | + | chr7_3:64218955-64218974 | None:intergenic | 35.0% | |
| ! | CCTTTTCATTGTTTGGGTAA+TGG | - | chr7_3:64218952-64218971 | Msa1116540:intron | 35.0% |
| ATGTTAACACAGTTACTACG+TGG | + | chr7_3:64219204-64219223 | None:intergenic | 35.0% | |
| !! | ATTGCTTTTATGTGGCAGAT+AGG | - | chr7_3:64219320-64219339 | Msa1116540:intron | 35.0% |
| AAGCTCAAGTTCAACTCATT+TGG | - | chr7_3:64219928-64219947 | Msa1116540:intron | 35.0% | |
| CTAGTTACATCAGGAAATTC+TGG | - | chr7_3:64220004-64220023 | Msa1116540:intron | 35.0% | |
| GAAGTCCCTTACATAACAAA+GGG | + | chr7_3:64220083-64220102 | None:intergenic | 35.0% | |
| ! | TATATGATTGGGCATGGTTT+TGG | + | chr7_3:64221010-64221029 | None:intergenic | 35.0% |
| CATGCCCAATCATATAACAA+CGG | - | chr7_3:64221014-64221033 | Msa1116540:intron | 35.0% | |
| ATGCCCAATCATATAACAAC+GGG | - | chr7_3:64221015-64221034 | Msa1116540:intron | 35.0% | |
| TGTCCCGTTGTTATATGATT+GGG | + | chr7_3:64221021-64221040 | None:intergenic | 35.0% | |
| ATGTCCCGTTGTTATATGAT+TGG | + | chr7_3:64221022-64221041 | None:intergenic | 35.0% | |
| ! | AACTAAACTTTTCGATCCCT+CGG | - | chr7_3:64221190-64221209 | Msa1116540:intron | 35.0% |
| CCATAATTGTAAGATAACCG+AGG | + | chr7_3:64221210-64221229 | None:intergenic | 35.0% | |
| CCTCGGTTATCTTACAATTA+TGG | - | chr7_3:64221207-64221226 | Msa1116540:intron | 35.0% | |
| !!! | ACCCTAAATGACTAGTTTTG+AGG | + | chr7_3:64221275-64221294 | None:intergenic | 35.0% |
| ! | CGAATTTTAGGCCTACAAAT+TGG | + | chr7_3:64221325-64221344 | None:intergenic | 35.0% |
| GTTAGAGTAAGAACAAGAGT+AGG | + | chr7_3:64222055-64222074 | None:intergenic | 35.0% | |
| TGATTGCATCGAAATTCGAT+TGG | + | chr7_3:64222079-64222098 | None:intergenic | 35.0% | |
| !! | AAGATCTTGTGCAGTTTTGA+AGG | + | chr7_3:64222113-64222132 | None:intergenic | 35.0% |
| AAACTGCACAAGATCTTTCT+TGG | - | chr7_3:64222116-64222135 | Msa1116540:intron | 35.0% | |
| TGCAAATTGTGTATGAGCTT+CGG | + | chr7_3:64222144-64222163 | None:intergenic | 35.0% | |
| GTTGGTATGAATGTTTGTGA+TGG | + | chr7_3:64222202-64222221 | None:intergenic | 35.0% | |
| AGATCTTCTTTGTACCACAT+TGG | - | chr7_3:64222241-64222260 | Msa1116540:CDS | 35.0% | |
| TAATTACCACTTCCATGCAT+AGG | + | chr7_3:64222307-64222326 | None:intergenic | 35.0% | |
| TCAATTGGAGCAGAATCAAT+CGG | + | chr7_3:64222457-64222476 | None:intergenic | 35.0% | |
| TCCAATTGAAGAATTACCAG+CGG | - | chr7_3:64222468-64222487 | Msa1116540:CDS | 35.0% | |
| GGTGGTATGAATGTTGTCAA+CGG | + | chr7_3:64216136-64216155 | None:intergenic | 40.0% | |
| !! | TGTGAAAATTGTGGTGTTGC+TGG | + | chr7_3:64216157-64216176 | None:intergenic | 40.0% |
| AACATAGTGTGAGATGAAGG+TGG | + | chr7_3:64216217-64216236 | None:intergenic | 40.0% | |
| GGAAACATAGTGTGAGATGA+AGG | + | chr7_3:64216220-64216239 | None:intergenic | 40.0% | |
| TAATTACCACGTCCATGCAT+GGG | + | chr7_3:64216241-64216260 | None:intergenic | 40.0% | |
| ATAATTACCACGTCCATGCA+TGG | + | chr7_3:64216242-64216261 | None:intergenic | 40.0% | |
| GTAGGGAAAATTGGAATCTC+TGG | + | chr7_3:64216298-64216317 | None:intergenic | 40.0% | |
| !! | TTTGTTGTTGTTCCTGTTGC+TGG | + | chr7_3:64216461-64216480 | None:intergenic | 40.0% |
| ! | ATGTGGTCTTGATCAAACTG+AGG | - | chr7_3:64217436-64217455 | Msa1116540:intron | 40.0% |
| ACATGCGTTGTTATATACGG+GGG | + | chr7_3:64217584-64217603 | None:intergenic | 40.0% | |
| GTTCTTGTCAACTGAACTAC+GGG | - | chr7_3:64217602-64217621 | Msa1116540:intron | 40.0% | |
| TTCTTGTCAACTGAACTACG+GGG | - | chr7_3:64217603-64217622 | Msa1116540:intron | 40.0% | |
| !!! | TGCACCTTAGTGTTTTTAGG+TGG | - | chr7_3:64218465-64218484 | Msa1116540:intron | 40.0% |
| !!! | GCACCTTAGTGTTTTTAGGT+GGG | - | chr7_3:64218466-64218485 | Msa1116540:intron | 40.0% |
| ACACCCACCTAAAAACACTA+AGG | + | chr7_3:64218472-64218491 | None:intergenic | 40.0% | |
| GCACCTACCTAAAAACACTA+AGG | - | chr7_3:64218608-64218627 | Msa1116540:intron | 40.0% | |
| !!! | GCACCTTAGTGTTTTTAGGT+AGG | + | chr7_3:64218466-64218485 | None:intergenic | 40.0% |
| GCACACACCTAAAAACACTA+AGG | + | chr7_3:64218808-64218827 | None:intergenic | 40.0% | |
| CCAAACAATGAAAAGGGTTC+TGG | + | chr7_3:64218948-64218967 | None:intergenic | 40.0% | |
| ! | CCAGAACCCTTTTCATTGTT+TGG | - | chr7_3:64218945-64218964 | Msa1116540:intron | 40.0% |
| ! | GTGGAATCTAGCTCAATAGT+TGG | + | chr7_3:64219185-64219204 | None:intergenic | 40.0% |
| CTCGTGAACATTAAGAGAGT+CGG | + | chr7_3:64219446-64219465 | None:intergenic | 40.0% | |
| ! | TGAATCTAACGAGTTGAACC+AGG | + | chr7_3:64219472-64219491 | None:intergenic | 40.0% |
| CGTTGTTATATGATTGGGCA+TGG | + | chr7_3:64221016-64221035 | None:intergenic | 40.0% | |
| ! | CTTTGGGGGGAAATATTGTT+GGG | + | chr7_3:64221234-64221253 | None:intergenic | 40.0% |
| ! | TTCAAGGTAGGGCATGATTT+TGG | + | chr7_3:64221844-64221863 | None:intergenic | 40.0% |
| ATTTATAGAGGGGGGTTTCA+AGG | + | chr7_3:64221860-64221879 | None:intergenic | 40.0% | |
| TGCAAGAAGCTAGAGAAATG+TGG | + | chr7_3:64221926-64221945 | None:intergenic | 40.0% | |
| !!! | GTGCAGTTTTGAAGGTGTTA+TGG | + | chr7_3:64222105-64222124 | None:intergenic | 40.0% |
| AACAACATGGTGTGTGATGA+AGG | + | chr7_3:64222283-64222302 | None:intergenic | 40.0% | |
| !! | ACCATGTTGTTTCCTATGCA+TGG | - | chr7_3:64222292-64222311 | Msa1116540:intron | 40.0% |
| TCCATGCATAGGAAACAACA+TGG | + | chr7_3:64222296-64222315 | None:intergenic | 40.0% | |
| TTGTTTCCTATGCATGGAAG+TGG | - | chr7_3:64222298-64222317 | Msa1116540:intron | 40.0% | |
| ACAATTGGAACCTCTGGTAT+AGG | + | chr7_3:64222355-64222374 | None:intergenic | 40.0% | |
| ACCGCTGGTAATTCTTCAAT+TGG | + | chr7_3:64222472-64222491 | None:intergenic | 40.0% | |
| !! | GAAAATTGTGGTGTTGCTGG+TGG | + | chr7_3:64216154-64216173 | None:intergenic | 45.0% |
| !!! | AGAGTTTTTTCACGCCGCAA+TGG | - | chr7_3:64216178-64216197 | Msa1116540:CDS | 45.0% |
| ATAGTGTGAGATGAAGGTGG+TGG | + | chr7_3:64216214-64216233 | None:intergenic | 45.0% | |
| CACACTATGTTTCCCATGCA+TGG | - | chr7_3:64216226-64216245 | Msa1116540:CDS | 45.0% | |
| TCATGTATGGACGAAAGCGA+CGG | + | chr7_3:64216267-64216286 | None:intergenic | 45.0% | |
| TCTGGTATAGGCCTCATGTA+TGG | + | chr7_3:64216280-64216299 | None:intergenic | 45.0% | |
| AAACTCGTCTGAGCTTGACT+TGG | - | chr7_3:64219367-64219386 | Msa1116540:intron | 45.0% | |
| CTTAATGTTCACGAGCAACC+TGG | - | chr7_3:64219451-64219470 | Msa1116540:intron | 45.0% | |
| AGTAGGTGATCTTGACCACT+GGG | + | chr7_3:64219967-64219986 | None:intergenic | 45.0% | |
| TAGTAGGTGATCTTGACCAC+TGG | + | chr7_3:64219968-64219987 | None:intergenic | 45.0% | |
| AATGGTGAGATATGGTTGGG+TGG | + | chr7_3:64220031-64220050 | None:intergenic | 45.0% | |
| !! | GCTTTGGGGGGAAATATTGT+TGG | + | chr7_3:64221235-64221254 | None:intergenic | 45.0% |
| AACATGGTGTGTGATGAAGG+TGG | + | chr7_3:64222280-64222299 | None:intergenic | 45.0% | |
| TGACGAGTACGAGAGACAAT+TGG | + | chr7_3:64222370-64222389 | None:intergenic | 45.0% | |
| ! | TGGATCTTTGGGGAGAACAA+TGG | - | chr7_3:64222408-64222427 | Msa1116540:CDS | 45.0% |
| TTGAAGAATTACCAGCGGTC+TGG | - | chr7_3:64222473-64222492 | Msa1116540:CDS | 45.0% | |
| !!! | TAAGTAAATTTTTTTTTATA+GGG | + | chr7_3:64216847-64216866 | None:intergenic | 5.0% |
| !!! | ATAAGTAAATTTTTTTTTAT+AGG | + | chr7_3:64216848-64216867 | None:intergenic | 5.0% |
| !!! | TATTCTAATTAATTTTAAAT+AGG | + | chr7_3:64218395-64218414 | None:intergenic | 5.0% |
| !! | TATATATATATATATATATG+GGG | - | chr7_3:64218575-64218594 | Msa1116540:intron | 5.0% |
| !!! | TAAACTTTATTTTAATTAAA+AGG | - | chr7_3:64218688-64218707 | Msa1116540:intron | 5.0% |
| !! | TAGTAAATATATATATATAT+GGG | + | chr7_3:64218842-64218861 | None:intergenic | 5.0% |
| !! | TTAGTAAATATATATATATA+TGG | + | chr7_3:64218843-64218862 | None:intergenic | 5.0% |
| !!! | TTTTTAAAAGAAAAATTAAA+AGG | + | chr7_3:64219562-64219581 | None:intergenic | 5.0% |
| !!! | TTGTTTTTATTAAAATTATT+TGG | + | chr7_3:64220587-64220606 | None:intergenic | 5.0% |
| !!! | AAATTTTATTAATTTTTTTG+AGG | - | chr7_3:64221371-64221390 | Msa1116540:intron | 5.0% |
| !! | ATAAAAAGAAAATTAAAATT+TGG | - | chr7_3:64221447-64221466 | Msa1116540:intron | 5.0% |
| !!! | TAATTAACATTATTTTATTT+TGG | - | chr7_3:64221620-64221639 | Msa1116540:intron | 5.0% |
| ! | TGAGATGAAGGTGGTGGTAG+TGG | + | chr7_3:64216208-64216227 | None:intergenic | 50.0% |
| ATGTTTCCCATGCATGGACG+TGG | - | chr7_3:64216232-64216251 | Msa1116540:CDS | 50.0% | |
| ! | GTCGCTTTCGTCCATACATG+AGG | - | chr7_3:64216266-64216285 | Msa1116540:CDS | 50.0% |
| TCCATTGGAGCAAGATCAGC+CGG | + | chr7_3:64216391-64216410 | None:intergenic | 50.0% | |
| !! | AAATGGGAAGCACCAGCAAC+AGG | - | chr7_3:64216446-64216465 | Msa1116540:CDS | 50.0% |
| AACCAATATCCATGGGGCAC+CGG | + | chr7_3:64217670-64217689 | None:intergenic | 50.0% | |
| TTCAATGGCACACCTTGTGC+TGG | - | chr7_3:64219038-64219057 | Msa1116540:intron | 50.0% | |
| TAGTCTATCCCACCAGCACA+AGG | + | chr7_3:64219053-64219072 | None:intergenic | 50.0% | |
| ! | GTGCTGGTGGGATAGACTAT+TGG | - | chr7_3:64219054-64219073 | Msa1116540:intron | 50.0% |
| GGCAGATAGGACTAGAAACG+AGG | - | chr7_3:64219333-64219352 | Msa1116540:intron | 50.0% | |
| GTAGGTGATCTTGACCACTG+GGG | + | chr7_3:64219966-64219985 | None:intergenic | 50.0% | |
| AAATAGCCAACAGACGGGCA+CGG | - | chr7_3:64220656-64220675 | Msa1116540:intron | 50.0% | |
| TAGAGGGGGGTTTCAAGGTA+GGG | + | chr7_3:64221855-64221874 | None:intergenic | 50.0% | |
| ATAGAGGGGGGTTTCAAGGT+AGG | + | chr7_3:64221856-64221875 | None:intergenic | 50.0% | |
| !! | TGTGATGAAGGTGGTGGAGA+TGG | + | chr7_3:64222271-64222290 | None:intergenic | 50.0% |
| ATGGTGTGTGATGAAGGTGG+TGG | + | chr7_3:64222277-64222296 | None:intergenic | 50.0% | |
| ACCACCTTCATCCATCCATG+AGG | - | chr7_3:64222329-64222348 | Msa1116540:CDS | 50.0% | |
| TAGGCCTCATGGATGGATGA+AGG | + | chr7_3:64222336-64222355 | None:intergenic | 50.0% | |
| TCTGGTATAGGCCTCATGGA+TGG | + | chr7_3:64222343-64222362 | None:intergenic | 50.0% | |
| ATCCATGAGGCCTATACCAG+AGG | - | chr7_3:64222342-64222361 | Msa1116540:CDS | 50.0% | |
| AACCTCTGGTATAGGCCTCA+TGG | + | chr7_3:64222347-64222366 | None:intergenic | 50.0% | |
| CGAGAGACAATTGGAACCTC+TGG | + | chr7_3:64222361-64222380 | None:intergenic | 50.0% | |
| AAGAATTACCAGCGGTCTGG+TGG | - | chr7_3:64222476-64222495 | Msa1116540:CDS | 50.0% | |
| AGAATTACCAGCGGTCTGGT+GGG | - | chr7_3:64222477-64222496 | Msa1116540:CDS | 50.0% | |
| !! | GTGGTAGTGGTGGTCCATTG+CGG | + | chr7_3:64216195-64216214 | None:intergenic | 55.0% |
| !! | GATGAAGGTGGTGGTAGTGG+TGG | + | chr7_3:64216205-64216224 | None:intergenic | 55.0% |
| GGCTGATCTTGCTCCAATGG+AGG | - | chr7_3:64216390-64216409 | Msa1116540:CDS | 55.0% | |
| TGCTCCAATGGAGGAACGAC+TGG | - | chr7_3:64216399-64216418 | Msa1116540:CDS | 55.0% | |
| TCCAATGGAGGAACGACTGG+TGG | - | chr7_3:64216402-64216421 | Msa1116540:CDS | 55.0% | |
| ACCACCAGTCGTTCCTCCAT+TGG | + | chr7_3:64216406-64216425 | None:intergenic | 55.0% | |
| ! | CGACTGGTGGTGTTGAGTGA+TGG | - | chr7_3:64216415-64216434 | Msa1116540:CDS | 55.0% |
| GAATGTTAACCGGTGCCCCA+TGG | - | chr7_3:64217658-64217677 | Msa1116540:intron | 55.0% | |
| AACCGGTGCCCCATGGATAT+TGG | - | chr7_3:64217665-64217684 | Msa1116540:intron | 55.0% | |
| AATGGCACACCTTGTGCTGG+TGG | - | chr7_3:64219041-64219060 | Msa1116540:intron | 55.0% | |
| ! | ATGGCACACCTTGTGCTGGT+GGG | - | chr7_3:64219042-64219061 | Msa1116540:intron | 55.0% |
| GGTTCATGAACCAACCCCAG+TGG | - | chr7_3:64219949-64219968 | Msa1116540:intron | 55.0% | |
| GTGATCTTGACCACTGGGGT+TGG | + | chr7_3:64219962-64219981 | None:intergenic | 55.0% | |
| ! | GTGGAGATGGTGGTCCAATG+TGG | + | chr7_3:64222258-64222277 | None:intergenic | 55.0% |
| !! | GATGAAGGTGGTGGAGATGG+TGG | + | chr7_3:64222268-64222287 | None:intergenic | 55.0% |
| GCCTCATGGATGGATGAAGG+TGG | + | chr7_3:64222333-64222352 | None:intergenic | 55.0% | |
| GCCGGCTGATCTTGCTCCAA+TGG | - | chr7_3:64216387-64216406 | Msa1116540:CDS | 60.0% | |
| TTACCAGCGGTCTGGTGGGA+TGG | - | chr7_3:64222481-64222500 | Msa1116540:CDS | 60.0% | |
| TTTCCATCCCACCAGACCGC+TGG | + | chr7_3:64222487-64222506 | None:intergenic | 60.0% | |
| TGTGCGCATCCACACACGCG+TGG | - | chr7_3:64219802-64219821 | Msa1116540:intron | 65.0% | |
| GTGCGCATCCACACACGCGT+GGG | - | chr7_3:64219803-64219822 | Msa1116540:intron | 65.0% | |
| TGTGTGCACCCACGCGTGTG+TGG | + | chr7_3:64219814-64219833 | None:intergenic | 65.0% | |
| ACCACTCCGTGCCCGTCTGT+TGG | + | chr7_3:64220665-64220684 | None:intergenic | 65.0% | |
| GCCAACAGACGGGCACGGAG+TGG | - | chr7_3:64220661-64220680 | Msa1116540:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 64216103 | 64222540 | 64216103 | ID=Msa1116540;Name=Msa1116540 |
| chr7_3 | mRNA | 64216103 | 64222540 | 64216103 | ID=Msa1116540-mRNA-1;Parent=Msa1116540;Name=Msa1116540-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0|0|0|1|0|0|3|0|283 |
| chr7_3 | exon | 64222324 | 64222540 | 64222324 | ID=Msa1116540-mRNA-1:exon:15238;Parent=Msa1116540-mRNA-1 |
| chr7_3 | exon | 64222207 | 64222290 | 64222207 | ID=Msa1116540-mRNA-1:exon:15237;Parent=Msa1116540-mRNA-1 |
| chr7_3 | exon | 64216103 | 64216653 | 64216103 | ID=Msa1116540-mRNA-1:exon:15236;Parent=Msa1116540-mRNA-1 |
| chr7_3 | CDS | 64222324 | 64222540 | 64222324 | ID=Msa1116540-mRNA-1:cds;Parent=Msa1116540-mRNA-1 |
| chr7_3 | CDS | 64222207 | 64222290 | 64222207 | ID=Msa1116540-mRNA-1:cds;Parent=Msa1116540-mRNA-1 |
| chr7_3 | CDS | 64216103 | 64216653 | 64216103 | ID=Msa1116540-mRNA-1:cds;Parent=Msa1116540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
