AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1120200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1120200 MtrunA17_Chr7g0251651 93.878 196 10 2 1 196 1 194 7.45e-137 380
Msa1120200 MtrunA17_Chr7g0251661 69.014 142 43 1 16 157 8 148 5.98e-71 212
Msa1120200 MtrunA17_Chr7g0251671 70.000 140 41 1 18 157 10 148 9.68e-71 212
Msa1120200 MtrunA17_Chr2g0309891 32.278 158 99 5 16 167 4 159 1.75e-20 87.4
Msa1120200 MtrunA17_Chr6g0481091 32.468 154 97 5 16 164 4 155 9.91e-20 83.6
Msa1120200 MtrunA17_Chr4g0047841 34.247 146 85 6 18 157 15 155 1.27e-18 82.0
Msa1120200 MtrunA17_Chr5g0442771 37.037 135 76 6 13 142 14 144 1.51e-18 81.6
Msa1120200 MtrunA17_Chr2g0311651 30.851 188 94 9 13 174 18 195 2.06e-18 81.3
Msa1120200 MtrunA17_Chr5g0433781 33.846 130 81 4 16 142 4 131 9.31e-18 80.5
Msa1120200 MtrunA17_Chr2g0311661 35.664 143 75 7 10 142 14 149 9.74e-18 79.0
Msa1120200 MtrunA17_Chr3g0109821 33.077 130 82 4 16 142 4 131 1.89e-17 79.7
Msa1120200 MtrunA17_Chr6g0453131 30.822 146 95 4 5 147 2 144 3.61e-17 78.6
Msa1120200 MtrunA17_Chr5g0417791 28.571 161 106 6 16 173 1 155 1.02e-16 75.9
Msa1120200 MtrunA17_Chr5g0417001 32.374 139 86 6 14 148 11 145 1.83e-16 76.6
Msa1120200 MtrunA17_Chr8g0384721 29.496 139 90 5 12 147 1 134 1.96e-16 75.5
Msa1120200 MtrunA17_Chr3g0124761 31.111 135 85 4 16 147 5 134 1.98e-16 75.5
Msa1120200 MtrunA17_Chr1g0183741 32.353 136 85 5 15 146 7 139 3.41e-16 74.7
Msa1120200 MtrunA17_Chr7g0252971 30.882 136 80 5 18 142 8 140 3.49e-16 75.5
Msa1120200 MtrunA17_Chr3g0130731 31.655 139 87 4 12 147 1 134 4.67e-16 74.3
Msa1120200 MtrunA17_Chr2g0318101 33.588 131 76 6 18 142 15 140 5.37e-16 75.1
Msa1120200 MtrunA17_Chr1g0147421 32.576 132 81 6 18 144 27 155 6.21e-16 74.7
Msa1120200 MtrunA17_Chr6g0461661 32.824 131 81 5 16 142 16 143 6.31e-16 74.7
Msa1120200 MtrunA17_Chr5g0428991 29.231 195 123 6 5 186 12 204 6.47e-16 75.1
Msa1120200 MtrunA17_Chr4g0042561 27.950 161 105 7 17 173 8 161 7.87e-16 73.6
Msa1120200 MtrunA17_Chr4g0018391 28.750 160 108 5 18 173 7 164 8.99e-16 74.3
Msa1120200 MtrunA17_Chr1g0201021 30.270 185 107 8 2 177 3 174 1.13e-15 74.7
Msa1120200 MtrunA17_Chr8g0345711 31.538 130 82 4 18 142 12 139 1.55e-15 70.9
Msa1120200 MtrunA17_Chr7g0214071 34.586 133 77 6 16 144 13 139 3.65e-15 71.6
Msa1120200 MtrunA17_Chr8g0345701 28.000 150 85 4 12 142 1 146 3.96e-15 70.1
Msa1120200 MtrunA17_Chr2g0316971 31.852 135 85 6 18 148 23 154 6.19e-15 72.0
Msa1120200 MtrunA17_Chr6g0453451 34.247 146 88 7 1 142 2 143 6.92e-15 71.6
Msa1120200 MtrunA17_Chr8g0361731 28.804 184 111 9 4 172 2 180 6.93e-15 72.0
Msa1120200 MtrunA17_Chr8g0345671 31.429 140 88 5 18 152 11 147 9.29e-15 71.6
Msa1120200 MtrunA17_Chr3g0139331 31.298 131 83 6 18 144 11 138 9.68e-15 71.2
Msa1120200 MtrunA17_Chr3g0128151 32.857 140 83 5 12 142 10 147 1.00e-14 71.6
Msa1120200 MtrunA17_Chr7g0261411 32.353 136 85 5 15 146 7 139 1.25e-14 70.5
Msa1120200 MtrunA17_Chr8g0372121 30.597 134 87 5 18 147 6 137 2.68e-14 69.7
Msa1120200 MtrunA17_Chr1g0197361 31.373 153 90 8 21 164 11 157 3.21e-14 70.5
Msa1120200 MtrunA17_Chr4g0056541 28.571 161 105 7 18 172 7 163 3.44e-14 69.7
Msa1120200 MtrunA17_Chr4g0054791 27.746 173 115 4 14 179 2 171 3.85e-14 69.3
Msa1120200 MtrunA17_Chr6g0484441 27.922 154 104 6 18 168 5 154 4.10e-14 69.3
Msa1120200 MtrunA17_Chr3g0144271 28.916 166 105 8 18 178 23 180 6.45e-14 69.3
Msa1120200 MtrunA17_Chr4g0060931 30.075 133 86 6 13 142 12 140 8.82e-14 68.6
Msa1120200 MtrunA17_Chr5g0398971 27.820 133 91 4 18 146 7 138 1.00e-13 68.6
Msa1120200 MtrunA17_Chr7g0253011 33.094 139 84 6 16 148 15 150 1.01e-13 68.6
Msa1120200 MtrunA17_Chr3g0091921 30.827 133 85 6 13 142 11 139 1.40e-13 67.8
Msa1120200 MtrunA17_Chr7g0263931 27.119 177 110 8 7 177 6 169 1.56e-13 67.8
Msa1120200 MtrunA17_Chr8g0359921 32.061 131 80 6 16 142 12 137 1.99e-13 67.4
Msa1120200 MtrunA17_Chr5g0400461 28.655 171 102 7 15 174 3 164 2.80e-13 67.0
Msa1120200 MtrunA17_Chr1g0197351 31.250 128 83 4 18 142 42 167 4.29e-13 67.0
Msa1120200 MtrunA17_Chr3g0128111 32.000 125 80 4 21 142 45 167 4.30e-13 65.9
Msa1120200 MtrunA17_Chr5g0405211 30.233 129 84 5 18 142 8 134 6.20e-13 66.2
Msa1120200 MtrunA17_Chr3g0092671 29.801 151 95 6 21 164 8 154 7.52e-13 66.2
Msa1120200 MtrunA17_Chr8g0345731 29.771 131 86 4 18 142 24 154 1.19e-12 63.2
Msa1120200 MtrunA17_Chr8g0385991 27.329 161 104 7 17 169 13 168 2.53e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1120200 AT3G10500.1 34.211 152 93 6 18 164 9 158 4.88e-21 90.5
Msa1120200 AT5G13180.1 36.232 138 78 5 9 142 5 136 9.09e-21 87.0
Msa1120200 AT5G04410.1 34.375 128 79 4 18 142 9 134 5.69e-20 87.4
Msa1120200 AT3G03200.1 32.317 164 103 5 16 173 4 165 9.73e-20 86.7
Msa1120200 AT5G17260.1 31.098 164 105 5 16 173 4 165 1.87e-19 85.9
Msa1120200 AT3G17730.1 34.884 129 81 3 16 142 4 131 4.00e-19 82.4
Msa1120200 AT1G54330.1 32.927 164 100 5 16 174 4 162 7.84e-19 82.8
Msa1120200 AT1G65910.1 31.481 162 103 6 16 172 4 162 1.48e-18 83.2
Msa1120200 AT5G39820.1 32.432 148 92 6 4 147 7 150 2.28e-18 81.6
Msa1120200 AT3G12910.1 36.170 141 78 6 13 146 17 152 3.33e-18 80.9
Msa1120200 AT2G24430.2 34.109 129 78 6 18 142 16 141 4.87e-18 80.5
Msa1120200 AT2G24430.1 34.109 129 78 6 18 142 16 141 4.87e-18 80.5
Msa1120200 AT2G33480.1 34.043 141 83 5 5 142 2 135 7.26e-18 79.3
Msa1120200 AT2G33480.2 34.043 141 83 5 5 142 2 135 8.07e-18 79.3
Msa1120200 AT1G76420.1 32.432 148 91 7 1 142 3 147 8.77e-18 80.1
Msa1120200 AT1G61110.1 33.846 130 76 5 18 142 16 140 2.06e-17 79.0
Msa1120200 AT1G01720.1 29.744 195 115 8 16 194 5 193 2.65e-17 78.2
Msa1120200 AT3G04070.2 30.137 146 92 5 18 156 10 152 2.97e-17 78.6
Msa1120200 AT3G04070.1 30.137 146 92 5 18 156 10 152 4.97e-17 78.2
Msa1120200 AT5G07680.1 29.947 187 120 9 13 193 12 193 1.25e-16 77.0
Msa1120200 AT1G77450.1 31.852 135 84 4 16 147 8 137 1.31e-16 75.9
Msa1120200 AT5G07680.2 30.435 184 117 9 16 193 1 179 1.43e-16 76.6
Msa1120200 AT5G08790.1 29.787 141 91 5 16 153 5 140 1.89e-16 75.9
Msa1120200 AT1G26870.1 34.815 135 79 7 12 142 12 141 2.12e-16 76.6
Msa1120200 AT2G43000.1 28.866 194 115 9 13 191 14 199 2.18e-16 75.5
Msa1120200 AT5G18270.1 35.338 133 80 5 13 142 16 145 2.35e-16 76.3
Msa1120200 AT5G14000.1 26.590 173 117 5 5 173 2 168 3.13e-16 73.9
Msa1120200 AT3G10490.1 35.659 129 76 6 18 142 27 152 3.82e-16 74.3
Msa1120200 AT5G63790.1 30.370 135 86 5 16 147 48 177 5.81e-16 74.7
Msa1120200 AT5G63790.2 30.370 135 86 5 16 147 58 187 5.93e-16 75.1
Msa1120200 AT5G18270.2 34.586 133 81 5 13 142 16 145 6.33e-16 75.1
Msa1120200 AT1G34180.1 33.071 127 80 4 21 144 19 143 7.50e-16 75.5
Msa1120200 AT3G10480.1 35.659 129 76 6 18 142 27 152 8.52e-16 75.1
Msa1120200 AT3G10480.2 35.659 129 76 6 18 142 27 152 9.09e-16 75.1
Msa1120200 AT3G15170.1 31.852 135 85 6 12 142 14 145 1.28e-15 73.9
Msa1120200 AT1G34180.3 33.071 127 80 4 21 144 19 143 1.36e-15 74.7
Msa1120200 AT5G53950.1 32.331 133 83 6 14 142 13 142 1.75e-15 73.9
Msa1120200 AT5G61430.1 33.083 133 82 6 13 142 11 139 2.19e-15 73.6
Msa1120200 AT3G10490.2 35.659 129 76 6 18 142 27 152 2.26e-15 73.9
Msa1120200 AT5G66300.1 31.818 132 84 5 15 142 9 138 2.77e-15 72.8
Msa1120200 AT2G27300.1 31.690 142 90 7 6 144 3 140 2.87e-15 73.2
Msa1120200 AT3G29035.1 30.978 184 105 9 16 193 22 189 8.07e-15 71.6
Msa1120200 AT3G15510.1 32.800 125 77 5 22 142 21 142 8.74e-15 72.0
Msa1120200 AT1G34190.1 32.283 127 81 4 21 144 19 143 9.93e-15 72.0
Msa1120200 AT5G46590.1 30.000 130 83 4 18 142 6 132 1.05e-14 71.2
Msa1120200 AT5G46590.2 30.000 130 83 4 18 142 6 132 1.19e-14 70.9
Msa1120200 AT4G17980.1 28.387 155 101 6 18 165 6 157 1.20e-14 70.5
Msa1120200 AT5G39610.1 31.724 145 84 7 1 142 11 143 1.23e-14 70.9
Msa1120200 AT5G14000.2 27.097 155 103 5 5 155 2 150 1.34e-14 68.6
Msa1120200 AT3G04060.1 33.077 130 81 5 16 142 18 144 3.06e-14 70.1
Msa1120200 AT1G69490.1 31.250 128 81 5 18 142 9 132 3.69e-14 69.3
Msa1120200 AT4G17980.2 28.387 155 101 6 18 165 6 157 4.02e-14 69.7
Msa1120200 AT1G12260.2 28.387 155 105 5 18 168 7 159 5.15e-14 69.7
Msa1120200 AT5G24590.2 27.174 184 111 5 18 181 13 193 6.72e-14 69.7
Msa1120200 AT4G35580.1 28.141 199 115 7 18 192 9 203 7.09e-14 69.7
Msa1120200 AT5G62380.2 28.777 139 93 5 12 146 1 137 7.90e-14 69.3
Msa1120200 AT5G62380.1 28.777 139 93 5 12 146 1 137 7.90e-14 69.3
Msa1120200 AT4G35580.3 28.141 199 115 7 18 192 9 203 8.14e-14 69.3
Msa1120200 AT1G12260.1 28.387 155 105 5 18 168 7 159 8.14e-14 69.3
Msa1120200 AT4G35580.2 28.141 199 115 7 18 192 9 203 8.62e-14 69.3
Msa1120200 AT1G62700.1 27.329 161 111 5 17 173 6 164 8.85e-14 69.3
Msa1120200 AT1G62700.2 27.329 161 111 5 17 173 6 164 8.85e-14 69.3
Msa1120200 AT4G27410.2 28.571 168 110 7 16 178 12 174 1.12e-13 68.2
Msa1120200 AT1G79580.3 29.771 131 87 4 16 142 15 144 1.21e-13 68.6
Msa1120200 AT1G79580.5 29.771 131 87 4 16 142 15 144 1.21e-13 68.6
Msa1120200 AT1G79580.4 29.771 131 87 4 16 142 15 144 1.21e-13 68.6
Msa1120200 AT1G79580.2 29.771 131 87 4 16 142 15 144 1.21e-13 68.6
Msa1120200 AT1G79580.1 29.771 131 87 4 16 142 15 144 1.21e-13 68.6
Msa1120200 AT4G36160.2 29.630 135 89 5 12 142 8 140 1.48e-13 68.6
Msa1120200 AT4G36160.1 29.630 135 89 5 12 142 4 136 1.68e-13 68.2
Msa1120200 AT4G36160.3 29.630 135 89 5 12 142 4 136 1.68e-13 68.2
Msa1120200 AT3G12977.1 31.159 138 87 6 18 151 18 151 1.97e-13 67.4
Msa1120200 AT1G34180.2 30.216 139 80 5 21 144 19 155 2.02e-13 68.6
Msa1120200 AT1G33060.1 31.915 141 91 5 5 142 11 149 2.67e-13 68.2
Msa1120200 AT1G33060.2 31.915 141 91 5 5 142 11 149 2.88e-13 68.2
Msa1120200 AT1G34180.4 30.216 139 80 5 21 144 19 155 3.71e-13 67.4
Msa1120200 AT1G02230.1 30.714 140 86 4 16 148 1 136 3.89e-13 67.4
Msa1120200 AT1G71930.2 31.008 129 83 5 18 142 9 135 4.40e-13 67.0
Msa1120200 AT1G71930.1 31.008 129 83 5 18 142 9 135 4.40e-13 67.0
Msa1120200 AT2G18060.3 28.571 133 89 5 14 142 5 135 1.15e-12 65.9
Msa1120200 AT2G18060.1 28.571 133 89 5 14 142 5 135 1.15e-12 65.9
Msa1120200 AT5G09330.5 32.558 129 82 5 17 142 5 131 2.63e-12 65.1
Msa1120200 AT5G09330.2 32.558 129 82 5 17 142 5 131 2.63e-12 65.1
Msa1120200 AT5G09330.4 32.558 129 82 5 17 142 5 131 2.63e-12 65.1
Msa1120200 AT5G09330.3 32.558 129 82 5 17 142 5 131 2.63e-12 65.1
Msa1120200 AT5G09330.1 32.558 129 82 5 17 142 5 131 2.63e-12 65.1
Msa1120200 AT4G28530.1 30.405 148 80 6 15 142 7 151 6.55e-12 63.5
Msa1120200 AT4G27410.3 25.683 183 113 7 16 178 12 191 2.33e-11 62.0
Msa1120200 AT3G44290.2 29.457 129 81 6 21 144 17 140 3.31e-11 60.8
Msa1120200 AT1G32870.3 28.070 171 110 6 1 165 30 193 7.26e-11 60.8
Msa1120200 AT5G22290.1 28.571 161 105 8 21 177 24 178 8.28e-11 60.5

Find 58 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCATTGTCTTCAATTTAT+AGG 0.232995 7_3:-69437762 None:intergenic
TGAAATTACCTGTTGGATTC+AGG 0.250804 7_3:+69437892 Msa1120200:CDS
GAAAGAACACATTTGTTTAC+TGG 0.255170 7_3:+69438386 Msa1120200:CDS
CTTCACTTGCTAAGAACTTT+TGG 0.256930 7_3:+69437815 Msa1120200:five_prime_UTR
GGTACTATTTCTTTGATATC+AGG 0.295817 7_3:+69438257 Msa1120200:CDS
GAACCGTAGGTTCGAAAATA+TGG 0.299363 7_3:+69438279 Msa1120200:CDS
AAAGCATAGTGAGCTAGTTT+TGG 0.338409 7_3:+69437860 Msa1120200:CDS
AGAAATGAAACATGAGTTCA+TGG 0.371014 7_3:-69439293 None:intergenic
TCGAATTCTGACAGGACATT+TGG 0.373254 7_3:-69437981 None:intergenic
CAGGAATTGAGGTTTGTGCT+TGG 0.441832 7_3:+69439479 Msa1120200:three_prime_UTR
GAATTTAGTTGTAAGTCCTA+TGG 0.472907 7_3:+69439368 Msa1120200:three_prime_UTR
TGAGTTCATGGAGAGGGAGG+AGG 0.476558 7_3:-69439281 None:intergenic
GGATCAAACCTGAATCCAAC+AGG 0.478056 7_3:-69437900 None:intergenic
AAATCAATCACTGTTGGTGT+GGG 0.492009 7_3:-69439230 None:intergenic
AATTGAGGTTGTAAGTCCTA+TGG 0.511690 7_3:+69439426 Msa1120200:three_prime_UTR
ACAGGACATTTGGAAGAGGT+TGG 0.514459 7_3:-69437971 None:intergenic
GAGTTCATGGAGAGGGAGGA+GGG 0.516664 7_3:-69439280 None:intergenic
AATATGGATGCAAGAAGAGC+TGG 0.518416 7_3:+69438295 Msa1120200:CDS
GAGCCATGGAAGCTGCCAAA+AGG 0.533677 7_3:+69438017 Msa1120200:CDS
GAAATCAATCACTGTTGGTG+TGG 0.538024 7_3:-69439231 None:intergenic
ATTGAGAATAATTGTTGTGT+GGG 0.538881 7_3:+69439587 Msa1120200:three_prime_UTR
GAAGAGCTGGAAATGGTGAA+TGG 0.539470 7_3:+69438308 Msa1120200:CDS
AGTTCATGGAGAGGGAGGAG+GGG 0.541559 7_3:-69439279 None:intergenic
TTTGTTTACTGGAGAATGCA+AGG 0.541628 7_3:+69438397 Msa1120200:CDS
CTATCGGATATTTAAGATGA+AGG 0.543622 7_3:+69439184 Msa1120200:CDS
GAGAGAGAAAGAGAGAGACT+AGG 0.545275 7_3:-69437713 None:intergenic
TCTACAAACTCATGATCAGT+TGG 0.550976 7_3:-69437921 None:intergenic
GAAATACATCGAATTCTGAC+AGG 0.551455 7_3:-69437989 None:intergenic
GGACCTCTTCAAAGCATATG+AGG 0.554252 7_3:+69438236 Msa1120200:CDS
TCTGACAGGACATTTGGAAG+AGG 0.561916 7_3:-69437975 None:intergenic
ATGTATTTCAAACTGAGCCA+TGG 0.561975 7_3:+69438003 Msa1120200:CDS
TGAAACATGAGTTCATGGAG+AGG 0.563520 7_3:-69439288 None:intergenic
ATAATGCACATAATTAGTAA+AGG 0.565113 7_3:-69439551 None:intergenic
GATGGTATGAAATTACCTGT+TGG 0.565216 7_3:+69437885 Msa1120200:CDS
GATGCAAGAAGAGCTGGAAA+TGG 0.566075 7_3:+69438301 Msa1120200:CDS
AATTGAGAATAATTGTTGTG+TGG 0.569112 7_3:+69439586 Msa1120200:three_prime_UTR
ATCAATCACTGTTGGTGTGG+GGG 0.572846 7_3:-69439228 None:intergenic
ATGTAGGTGTACTCAGCTGT+AGG 0.589112 7_3:+69439158 Msa1120200:intron
ACTCAGCTGTAGGTGCCTAT+CGG 0.590616 7_3:+69439168 Msa1120200:CDS
GTACCTCATATGCTTTGAAG+AGG 0.594155 7_3:-69438239 None:intergenic
TCTTTGATATCAGGAACCGT+AGG 0.597083 7_3:+69438266 Msa1120200:CDS
AGAGACACTTGCATCTTCCA+TGG 0.599268 7_3:-69439255 None:intergenic
CTTCATCTTAAATATCCGAT+AGG 0.611455 7_3:-69439183 None:intergenic
ACATGAGTTCATGGAGAGGG+AGG 0.614894 7_3:-69439284 None:intergenic
GTGAATGGAGAATATATGAG+AGG 0.620604 7_3:+69438323 Msa1120200:CDS
TTGAGAATAATTGTTGTGTG+GGG 0.627933 7_3:+69439588 Msa1120200:three_prime_UTR
TTGTAGATTATTATCTGACG+AGG 0.629933 7_3:+69437937 Msa1120200:CDS
GAAACATGAGTTCATGGAGA+GGG 0.632009 7_3:-69439287 None:intergenic
AATCAATCACTGTTGGTGTG+GGG 0.641402 7_3:-69439229 None:intergenic
ATCAAGCTCTGATGACACAA+TGG 0.648632 7_3:+69438425 Msa1120200:CDS
AGGATGCATGAATTTGTCAT+CGG 0.657194 7_3:+69438448 Msa1120200:CDS
ATGGTGAAATCAATCACTGT+TGG 0.663372 7_3:-69439236 None:intergenic
TCGGATATTTAAGATGAAGG+TGG 0.674233 7_3:+69439187 Msa1120200:CDS
AACAGTGATTGATTTCACCA+TGG 0.680653 7_3:+69439238 Msa1120200:CDS
GAGAATATATGAGAGGAACG+AGG 0.682363 7_3:+69438330 Msa1120200:CDS
AAGCTCTGATGACACAATGG+AGG 0.685078 7_3:+69438428 Msa1120200:CDS
CAAGTGAAGAAAGAGTTGTG+TGG 0.710718 7_3:-69437801 None:intergenic
GTTTACTGGAGAATGCAAGG+AGG 0.745067 7_3:+69438400 Msa1120200:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACTAAAAAAAAAATATGA+TGG - chr7_3:69439345-69439364 None:intergenic 10.0%
!! AAACTAAAAAAAAAATATGA+TGG - chr7_3:69439345-69439364 None:intergenic 10.0%
!!! ACATAAGGAAAATTTTAAAA+GGG - chr7_3:69438118-69438137 None:intergenic 15.0%
!!! AACATAAGGAAAATTTTAAA+AGG - chr7_3:69438119-69438138 None:intergenic 15.0%
!!! ACATAAGGAAAATTTTAAAA+GGG - chr7_3:69438118-69438137 None:intergenic 15.0%
!!! AACATAAGGAAAATTTTAAA+AGG - chr7_3:69438119-69438138 None:intergenic 15.0%
!! ATCATAAGAAAAAGAATGAA+GGG - chr7_3:69438058-69438077 None:intergenic 20.0%
!! CCATCATAAGATTAATTAAA+GGG - chr7_3:69438150-69438169 None:intergenic 20.0%
!! TCCATCATAAGATTAATTAA+AGG - chr7_3:69438151-69438170 None:intergenic 20.0%
!!! TACAATTTTTCATCAAACTA+AGG + chr7_3:69438471-69438490 Msa1120200:CDS 20.0%
!! TAATGGCTTAATTAATGATT+TGG + chr7_3:69438517-69438536 Msa1120200:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG - chr7_3:69438874-69438893 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG - chr7_3:69438873-69438892 None:intergenic 20.0%
!! AAGTTATTAACGTTACAATT+TGG + chr7_3:69438577-69438596 Msa1120200:intron 20.0%
!!! ACGAAACTTTTAATAGTTAA+GGG - chr7_3:69438814-69438833 None:intergenic 20.0%
!!! AACGAAACTTTTAATAGTTA+AGG - chr7_3:69438813-69438832 None:intergenic 20.0%
!!! AACTATTAAAAGTTTCGTTT+TGG + chr7_3:69438637-69438656 Msa1120200:intron 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG - chr7_3:69438754-69438773 None:intergenic 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG - chr7_3:69438754-69438773 None:intergenic 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG + chr7_3:69438754-69438773 Msa1120200:intron 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG + chr7_3:69438754-69438773 Msa1120200:intron 20.0%
!!! AACTATTAAAAGTTTCGTTT+TGG - chr7_3:69438637-69438656 None:intergenic 20.0%
!!! AACGAAACTTTTAATAGTTA+AGG + chr7_3:69438813-69438832 Msa1120200:intron 20.0%
!!! ACGAAACTTTTAATAGTTAA+GGG + chr7_3:69438814-69438833 Msa1120200:intron 20.0%
!! AAGTTATTAACGTTACAATT+TGG - chr7_3:69438577-69438596 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG + chr7_3:69438873-69438892 Msa1120200:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG + chr7_3:69438874-69438893 Msa1120200:intron 20.0%
!!! TGTCAGTATAAGATTATTTT+AGG - chr7_3:69438949-69438968 None:intergenic 20.0%
!! ATCACTATAAAAAAACTATG+AGG + chr7_3:69438999-69439018 Msa1120200:intron 20.0%
!!! TTTGAAGTAATAATGTGTTT+TGG + chr7_3:69439028-69439047 Msa1120200:intron 20.0%
!!! TTTTGAACTCAAATTAATGT+AGG + chr7_3:69439142-69439161 Msa1120200:intron 20.0%
!! ATAATGCACATAATTAGTAA+AGG - chr7_3:69439554-69439573 None:intergenic 20.0%
!! ATCATAAGAAAAAGAATGAA+GGG - chr7_3:69438058-69438077 None:intergenic 20.0%
!! CCATCATAAGATTAATTAAA+GGG - chr7_3:69438150-69438169 None:intergenic 20.0%
!! TCCATCATAAGATTAATTAA+AGG - chr7_3:69438151-69438170 None:intergenic 20.0%
!!! TACAATTTTTCATCAAACTA+AGG + chr7_3:69438471-69438490 Msa1120200:CDS 20.0%
!! TAATGGCTTAATTAATGATT+TGG + chr7_3:69438517-69438536 Msa1120200:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG - chr7_3:69438874-69438893 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG - chr7_3:69438873-69438892 None:intergenic 20.0%
!! AAGTTATTAACGTTACAATT+TGG + chr7_3:69438577-69438596 Msa1120200:intron 20.0%
!!! ACGAAACTTTTAATAGTTAA+GGG - chr7_3:69438814-69438833 None:intergenic 20.0%
!!! AACGAAACTTTTAATAGTTA+AGG - chr7_3:69438813-69438832 None:intergenic 20.0%
!!! AACTATTAAAAGTTTCGTTT+TGG + chr7_3:69438637-69438656 Msa1120200:intron 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG - chr7_3:69438754-69438773 None:intergenic 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG - chr7_3:69438754-69438773 None:intergenic 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG + chr7_3:69438754-69438773 Msa1120200:intron 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG + chr7_3:69438754-69438773 Msa1120200:intron 20.0%
!!! AACTATTAAAAGTTTCGTTT+TGG - chr7_3:69438637-69438656 None:intergenic 20.0%
!!! AACGAAACTTTTAATAGTTA+AGG + chr7_3:69438813-69438832 Msa1120200:intron 20.0%
!!! ACGAAACTTTTAATAGTTAA+GGG + chr7_3:69438814-69438833 Msa1120200:intron 20.0%
!! AAGTTATTAACGTTACAATT+TGG - chr7_3:69438577-69438596 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG + chr7_3:69438873-69438892 Msa1120200:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG + chr7_3:69438874-69438893 Msa1120200:intron 20.0%
!!! TGTCAGTATAAGATTATTTT+AGG - chr7_3:69438949-69438968 None:intergenic 20.0%
!! ATCACTATAAAAAAACTATG+AGG + chr7_3:69438999-69439018 Msa1120200:intron 20.0%
!!! TTTGAAGTAATAATGTGTTT+TGG + chr7_3:69439028-69439047 Msa1120200:intron 20.0%
!!! TTTTGAACTCAAATTAATGT+AGG + chr7_3:69439142-69439161 Msa1120200:intron 20.0%
!! ATAATGCACATAATTAGTAA+AGG - chr7_3:69439554-69439573 None:intergenic 20.0%
! ATGCATTGTCTTCAATTTAT+AGG - chr7_3:69437765-69437784 None:intergenic 25.0%
!! CTATAATTTCACAAACCTTT+TGG - chr7_3:69438035-69438054 None:intergenic 25.0%
! GATCATAAGAAAAAGAATGA+AGG - chr7_3:69438059-69438078 None:intergenic 25.0%
! CCCTTTAATTAATCTTATGA+TGG + chr7_3:69438147-69438166 Msa1120200:intron 25.0%
!!! ATTTGTTTTCTGCAGATAAT+AGG + chr7_3:69438215-69438234 Msa1120200:intron 25.0%
! TCAGATGATGCATAAAATAA+TGG + chr7_3:69438500-69438519 Msa1120200:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG - chr7_3:69438905-69438924 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG - chr7_3:69438904-69438923 None:intergenic 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG + chr7_3:69438548-69438567 Msa1120200:intron 25.0%
! GAAACCAAAAAGTAACTTAA+GGG - chr7_3:69438845-69438864 None:intergenic 25.0%
! CGAAACCAAAAAATAAGTTA+AGG - chr7_3:69438753-69438772 None:intergenic 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG + chr7_3:69438668-69438687 Msa1120200:intron 25.0%
! CGAAACCAAAAAATAAGTTA+AGG - chr7_3:69438753-69438772 None:intergenic 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG + chr7_3:69438668-69438687 Msa1120200:intron 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG - chr7_3:69438668-69438687 None:intergenic 25.0%
! CGAAACCAAAAAATAAGTTA+AGG + chr7_3:69438753-69438772 Msa1120200:intron 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG - chr7_3:69438668-69438687 None:intergenic 25.0%
! CGAAACCAAAAAATAAGTTA+AGG + chr7_3:69438753-69438772 Msa1120200:intron 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG - chr7_3:69438548-69438567 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG + chr7_3:69438904-69438923 Msa1120200:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG + chr7_3:69438905-69438924 Msa1120200:intron 25.0%
!! TTTAGGCTTAATTACTCTTT+TGG - chr7_3:69438932-69438951 None:intergenic 25.0%
!!! AAACATGTTTTTTTGTCCAT+AGG - chr7_3:69439387-69439406 None:intergenic 25.0%
!!! GTTTTATCTTTCTAGTTTTC+AGG + chr7_3:69439403-69439422 Msa1120200:three_prime_UTR 25.0%
!!! AAAACATGTTTTTTGTCCAT+AGG - chr7_3:69439445-69439464 None:intergenic 25.0%
!!! GTTTTATCTTTCTAGTTTTC+AGG + chr7_3:69439403-69439422 Msa1120200:three_prime_UTR 25.0%
! ATGCATTGTCTTCAATTTAT+AGG - chr7_3:69437765-69437784 None:intergenic 25.0%
!! CTATAATTTCACAAACCTTT+TGG - chr7_3:69438035-69438054 None:intergenic 25.0%
! GATCATAAGAAAAAGAATGA+AGG - chr7_3:69438059-69438078 None:intergenic 25.0%
! CCCTTTAATTAATCTTATGA+TGG + chr7_3:69438147-69438166 Msa1120200:intron 25.0%
!!! ATTTGTTTTCTGCAGATAAT+AGG + chr7_3:69438215-69438234 Msa1120200:intron 25.0%
! TCAGATGATGCATAAAATAA+TGG + chr7_3:69438500-69438519 Msa1120200:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG - chr7_3:69438905-69438924 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG - chr7_3:69438904-69438923 None:intergenic 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG + chr7_3:69438548-69438567 Msa1120200:intron 25.0%
! GAAACCAAAAAGTAACTTAA+GGG - chr7_3:69438845-69438864 None:intergenic 25.0%
! CGAAACCAAAAAATAAGTTA+AGG - chr7_3:69438753-69438772 None:intergenic 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG + chr7_3:69438668-69438687 Msa1120200:intron 25.0%
! CGAAACCAAAAAATAAGTTA+AGG - chr7_3:69438753-69438772 None:intergenic 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG + chr7_3:69438668-69438687 Msa1120200:intron 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG - chr7_3:69438668-69438687 None:intergenic 25.0%
! CGAAACCAAAAAATAAGTTA+AGG + chr7_3:69438753-69438772 Msa1120200:intron 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG - chr7_3:69438668-69438687 None:intergenic 25.0%
! CGAAACCAAAAAATAAGTTA+AGG + chr7_3:69438753-69438772 Msa1120200:intron 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG - chr7_3:69438548-69438567 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG + chr7_3:69438904-69438923 Msa1120200:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG + chr7_3:69438905-69438924 Msa1120200:intron 25.0%
!! TTTAGGCTTAATTACTCTTT+TGG - chr7_3:69438932-69438951 None:intergenic 25.0%
!!! AAACATGTTTTTTTGTCCAT+AGG - chr7_3:69439387-69439406 None:intergenic 25.0%
!!! GTTTTATCTTTCTAGTTTTC+AGG + chr7_3:69439403-69439422 Msa1120200:three_prime_UTR 25.0%
!!! AAAACATGTTTTTTGTCCAT+AGG - chr7_3:69439445-69439464 None:intergenic 25.0%
!!! GTTTTATCTTTCTAGTTTTC+AGG + chr7_3:69439403-69439422 Msa1120200:three_prime_UTR 25.0%
TTGTAGATTATTATCTGACG+AGG + chr7_3:69437937-69437956 Msa1120200:CDS 30.0%
AAAGGGTTTCAAAGAACATA+AGG - chr7_3:69438133-69438152 None:intergenic 30.0%
! GGTACTATTTCTTTGATATC+AGG + chr7_3:69438257-69438276 Msa1120200:CDS 30.0%
GAAAGAACACATTTGTTTAC+TGG + chr7_3:69438386-69438405 Msa1120200:CDS 30.0%
CGAAACCAAAAAGTAACTTA+AGG - chr7_3:69438844-69438863 None:intergenic 30.0%
!!! GTTACTTTTTGGTTTCGTTT+TGG + chr7_3:69438608-69438627 Msa1120200:intron 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG + chr7_3:69438657-69438676 Msa1120200:intron 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG + chr7_3:69438657-69438676 Msa1120200:intron 30.0%
TCCCTCCAAAAAATAAGTTA+AGG + chr7_3:69438722-69438741 Msa1120200:intron 30.0%
!!! CCCTTAACTTATTTTTTGGA+GGG - chr7_3:69438726-69438745 None:intergenic 30.0%
CCCTCCAAAAAATAAGTTAA+GGG + chr7_3:69438723-69438742 Msa1120200:intron 30.0%
!!! TCCCTTAACTTATTTTTTGG+AGG - chr7_3:69438660-69438679 None:intergenic 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG - chr7_3:69438657-69438676 None:intergenic 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG - chr7_3:69438657-69438676 None:intergenic 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG - chr7_3:69438657-69438676 None:intergenic 30.0%
!!! GTTACTTTTTGGTTTCGTTT+TGG - chr7_3:69438608-69438627 None:intergenic 30.0%
!!! TGGTCTCTTAAGTTACTTTT+TGG - chr7_3:69438852-69438871 None:intergenic 30.0%
!!! TGCTAGTTTTATGCAAAAAG+TGG + chr7_3:69439070-69439089 Msa1120200:intron 30.0%
CTTCATCTTAAATATCCGAT+AGG - chr7_3:69439186-69439205 None:intergenic 30.0%
! CTATCGGATATTTAAGATGA+AGG + chr7_3:69439184-69439203 Msa1120200:CDS 30.0%
AGAAATGAAACATGAGTTCA+TGG - chr7_3:69439296-69439315 None:intergenic 30.0%
GAATTTAGTTGTAAGTCCTA+TGG + chr7_3:69439368-69439387 Msa1120200:three_prime_UTR 30.0%
!!! TTTCTAGTTTTCAGGAATTG+AGG + chr7_3:69439411-69439430 Msa1120200:three_prime_UTR 30.0%
!!! TTTCTAGTTTTCAGGAATTG+AGG + chr7_3:69439411-69439430 Msa1120200:three_prime_UTR 30.0%
TTGTAGATTATTATCTGACG+AGG + chr7_3:69437937-69437956 Msa1120200:CDS 30.0%
AAAGGGTTTCAAAGAACATA+AGG - chr7_3:69438133-69438152 None:intergenic 30.0%
! GGTACTATTTCTTTGATATC+AGG + chr7_3:69438257-69438276 Msa1120200:CDS 30.0%
GAAAGAACACATTTGTTTAC+TGG + chr7_3:69438386-69438405 Msa1120200:CDS 30.0%
CGAAACCAAAAAGTAACTTA+AGG - chr7_3:69438844-69438863 None:intergenic 30.0%
!!! GTTACTTTTTGGTTTCGTTT+TGG + chr7_3:69438608-69438627 Msa1120200:intron 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG + chr7_3:69438657-69438676 Msa1120200:intron 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG + chr7_3:69438657-69438676 Msa1120200:intron 30.0%
TCCCTCCAAAAAATAAGTTA+AGG + chr7_3:69438722-69438741 Msa1120200:intron 30.0%
!!! CCCTTAACTTATTTTTTGGA+GGG - chr7_3:69438726-69438745 None:intergenic 30.0%
CCCTCCAAAAAATAAGTTAA+GGG + chr7_3:69438723-69438742 Msa1120200:intron 30.0%
!!! TCCCTTAACTTATTTTTTGG+AGG - chr7_3:69438660-69438679 None:intergenic 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG - chr7_3:69438657-69438676 None:intergenic 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG - chr7_3:69438657-69438676 None:intergenic 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG - chr7_3:69438657-69438676 None:intergenic 30.0%
!!! GTTACTTTTTGGTTTCGTTT+TGG - chr7_3:69438608-69438627 None:intergenic 30.0%
!!! TGGTCTCTTAAGTTACTTTT+TGG - chr7_3:69438852-69438871 None:intergenic 30.0%
!!! TGCTAGTTTTATGCAAAAAG+TGG + chr7_3:69439070-69439089 Msa1120200:intron 30.0%
CTTCATCTTAAATATCCGAT+AGG - chr7_3:69439186-69439205 None:intergenic 30.0%
! CTATCGGATATTTAAGATGA+AGG + chr7_3:69439184-69439203 Msa1120200:CDS 30.0%
AGAAATGAAACATGAGTTCA+TGG - chr7_3:69439296-69439315 None:intergenic 30.0%
GAATTTAGTTGTAAGTCCTA+TGG + chr7_3:69439368-69439387 Msa1120200:three_prime_UTR 30.0%
!!! TTTCTAGTTTTCAGGAATTG+AGG + chr7_3:69439411-69439430 Msa1120200:three_prime_UTR 30.0%
!!! TTTCTAGTTTTCAGGAATTG+AGG + chr7_3:69439411-69439430 Msa1120200:three_prime_UTR 30.0%
!! CTTCACTTGCTAAGAACTTT+TGG + chr7_3:69437815-69437834 Msa1120200:five_prime_UTR 35.0%
!! AAAGCATAGTGAGCTAGTTT+TGG + chr7_3:69437860-69437879 Msa1120200:CDS 35.0%
GATGGTATGAAATTACCTGT+TGG + chr7_3:69437885-69437904 Msa1120200:CDS 35.0%
TGAAATTACCTGTTGGATTC+AGG + chr7_3:69437892-69437911 Msa1120200:CDS 35.0%
TCTACAAACTCATGATCAGT+TGG - chr7_3:69437924-69437943 None:intergenic 35.0%
GAAATACATCGAATTCTGAC+AGG - chr7_3:69437992-69438011 None:intergenic 35.0%
ATGTATTTCAAACTGAGCCA+TGG + chr7_3:69438003-69438022 Msa1120200:CDS 35.0%
! CATCCATATTTTCGAACCTA+CGG - chr7_3:69438285-69438304 None:intergenic 35.0%
GTGAATGGAGAATATATGAG+AGG + chr7_3:69438323-69438342 Msa1120200:CDS 35.0%
TTTGTTTACTGGAGAATGCA+AGG + chr7_3:69438397-69438416 Msa1120200:CDS 35.0%
AGGATGCATGAATTTGTCAT+CGG + chr7_3:69438448-69438467 Msa1120200:CDS 35.0%
TGGTCCCTTAAGTTATTTGT+TGG + chr7_3:69438537-69438556 Msa1120200:intron 35.0%
!!! TGGTCCCTTAAGTTACTTTT+TGG + chr7_3:69438597-69438616 Msa1120200:intron 35.0%
TGGTCCCTTAAGTTATTTGT+TGG - chr7_3:69438537-69438556 None:intergenic 35.0%
! TCGGATATTTAAGATGAAGG+TGG + chr7_3:69439187-69439206 Msa1120200:CDS 35.0%
AAATCAATCACTGTTGGTGT+GGG - chr7_3:69439233-69439252 None:intergenic 35.0%
ATGGTGAAATCAATCACTGT+TGG - chr7_3:69439239-69439258 None:intergenic 35.0%
! AACAGTGATTGATTTCACCA+TGG + chr7_3:69439238-69439257 Msa1120200:CDS 35.0%
AATTGAGGTTGTAAGTCCTA+TGG + chr7_3:69439426-69439445 Msa1120200:three_prime_UTR 35.0%
!! CTTCACTTGCTAAGAACTTT+TGG + chr7_3:69437815-69437834 Msa1120200:five_prime_UTR 35.0%
!! AAAGCATAGTGAGCTAGTTT+TGG + chr7_3:69437860-69437879 Msa1120200:CDS 35.0%
GATGGTATGAAATTACCTGT+TGG + chr7_3:69437885-69437904 Msa1120200:CDS 35.0%
TGAAATTACCTGTTGGATTC+AGG + chr7_3:69437892-69437911 Msa1120200:CDS 35.0%
TCTACAAACTCATGATCAGT+TGG - chr7_3:69437924-69437943 None:intergenic 35.0%
GAAATACATCGAATTCTGAC+AGG - chr7_3:69437992-69438011 None:intergenic 35.0%
ATGTATTTCAAACTGAGCCA+TGG + chr7_3:69438003-69438022 Msa1120200:CDS 35.0%
! CATCCATATTTTCGAACCTA+CGG - chr7_3:69438285-69438304 None:intergenic 35.0%
GTGAATGGAGAATATATGAG+AGG + chr7_3:69438323-69438342 Msa1120200:CDS 35.0%
TTTGTTTACTGGAGAATGCA+AGG + chr7_3:69438397-69438416 Msa1120200:CDS 35.0%
AGGATGCATGAATTTGTCAT+CGG + chr7_3:69438448-69438467 Msa1120200:CDS 35.0%
TGGTCCCTTAAGTTATTTGT+TGG + chr7_3:69438537-69438556 Msa1120200:intron 35.0%
!!! TGGTCCCTTAAGTTACTTTT+TGG + chr7_3:69438597-69438616 Msa1120200:intron 35.0%
TGGTCCCTTAAGTTATTTGT+TGG - chr7_3:69438537-69438556 None:intergenic 35.0%
! TCGGATATTTAAGATGAAGG+TGG + chr7_3:69439187-69439206 Msa1120200:CDS 35.0%
AAATCAATCACTGTTGGTGT+GGG - chr7_3:69439233-69439252 None:intergenic 35.0%
ATGGTGAAATCAATCACTGT+TGG - chr7_3:69439239-69439258 None:intergenic 35.0%
! AACAGTGATTGATTTCACCA+TGG + chr7_3:69439238-69439257 Msa1120200:CDS 35.0%
AATTGAGGTTGTAAGTCCTA+TGG + chr7_3:69439426-69439445 Msa1120200:three_prime_UTR 35.0%
CAAGTGAAGAAAGAGTTGTG+TGG - chr7_3:69437804-69437823 None:intergenic 40.0%
!! AGAACTTTTGGTGACAACCA+TGG + chr7_3:69437827-69437846 Msa1120200:exon 40.0%
!!! AGTGAGCTAGTTTTGGAAGA+TGG + chr7_3:69437867-69437886 Msa1120200:CDS 40.0%
TCGAATTCTGACAGGACATT+TGG - chr7_3:69437984-69438003 None:intergenic 40.0%
!! GTACCTCATATGCTTTGAAG+AGG - chr7_3:69438242-69438261 None:intergenic 40.0%
TCTTTGATATCAGGAACCGT+AGG + chr7_3:69438266-69438285 Msa1120200:CDS 40.0%
GAACCGTAGGTTCGAAAATA+TGG + chr7_3:69438279-69438298 Msa1120200:CDS 40.0%
AATATGGATGCAAGAAGAGC+TGG + chr7_3:69438295-69438314 Msa1120200:CDS 40.0%
GAGAATATATGAGAGGAACG+AGG + chr7_3:69438330-69438349 Msa1120200:CDS 40.0%
! ATCAAGCTCTGATGACACAA+TGG + chr7_3:69438425-69438444 Msa1120200:CDS 40.0%
AATCAATCACTGTTGGTGTG+GGG - chr7_3:69439232-69439251 None:intergenic 40.0%
GAAATCAATCACTGTTGGTG+TGG - chr7_3:69439234-69439253 None:intergenic 40.0%
GAAACATGAGTTCATGGAGA+GGG - chr7_3:69439290-69439309 None:intergenic 40.0%
TGAAACATGAGTTCATGGAG+AGG - chr7_3:69439291-69439310 None:intergenic 40.0%
CAAGTGAAGAAAGAGTTGTG+TGG - chr7_3:69437804-69437823 None:intergenic 40.0%
!! AGAACTTTTGGTGACAACCA+TGG + chr7_3:69437827-69437846 Msa1120200:exon 40.0%
!!! AGTGAGCTAGTTTTGGAAGA+TGG + chr7_3:69437867-69437886 Msa1120200:CDS 40.0%
TCGAATTCTGACAGGACATT+TGG - chr7_3:69437984-69438003 None:intergenic 40.0%
!! GTACCTCATATGCTTTGAAG+AGG - chr7_3:69438242-69438261 None:intergenic 40.0%
TCTTTGATATCAGGAACCGT+AGG + chr7_3:69438266-69438285 Msa1120200:CDS 40.0%
GAACCGTAGGTTCGAAAATA+TGG + chr7_3:69438279-69438298 Msa1120200:CDS 40.0%
AATATGGATGCAAGAAGAGC+TGG + chr7_3:69438295-69438314 Msa1120200:CDS 40.0%
GAGAATATATGAGAGGAACG+AGG + chr7_3:69438330-69438349 Msa1120200:CDS 40.0%
! ATCAAGCTCTGATGACACAA+TGG + chr7_3:69438425-69438444 Msa1120200:CDS 40.0%
AATCAATCACTGTTGGTGTG+GGG - chr7_3:69439232-69439251 None:intergenic 40.0%
GAAATCAATCACTGTTGGTG+TGG - chr7_3:69439234-69439253 None:intergenic 40.0%
GAAACATGAGTTCATGGAGA+GGG - chr7_3:69439290-69439309 None:intergenic 40.0%
TGAAACATGAGTTCATGGAG+AGG - chr7_3:69439291-69439310 None:intergenic 40.0%
GAGAGAGAAAGAGAGAGACT+AGG - chr7_3:69437716-69437735 None:intergenic 45.0%
! ATGCTTTTCATCAGCAGCCA+TGG - chr7_3:69437847-69437866 None:intergenic 45.0%
GGATCAAACCTGAATCCAAC+AGG - chr7_3:69437903-69437922 None:intergenic 45.0%
ACAGGACATTTGGAAGAGGT+TGG - chr7_3:69437974-69437993 None:intergenic 45.0%
TCTGACAGGACATTTGGAAG+AGG - chr7_3:69437978-69437997 None:intergenic 45.0%
! AAACCTTTTGGCAGCTTCCA+TGG - chr7_3:69438023-69438042 None:intergenic 45.0%
GGACCTCTTCAAAGCATATG+AGG + chr7_3:69438236-69438255 Msa1120200:CDS 45.0%
GATGCAAGAAGAGCTGGAAA+TGG + chr7_3:69438301-69438320 Msa1120200:CDS 45.0%
GAAGAGCTGGAAATGGTGAA+TGG + chr7_3:69438308-69438327 Msa1120200:CDS 45.0%
GTTTACTGGAGAATGCAAGG+AGG + chr7_3:69438400-69438419 Msa1120200:CDS 45.0%
! AAGCTCTGATGACACAATGG+AGG + chr7_3:69438428-69438447 Msa1120200:CDS 45.0%
ATGTAGGTGTACTCAGCTGT+AGG + chr7_3:69439158-69439177 Msa1120200:intron 45.0%
ATCAATCACTGTTGGTGTGG+GGG - chr7_3:69439231-69439250 None:intergenic 45.0%
AGAGACACTTGCATCTTCCA+TGG - chr7_3:69439258-69439277 None:intergenic 45.0%
CAGGAATTGAGGTTTGTGCT+TGG + chr7_3:69439479-69439498 Msa1120200:three_prime_UTR 45.0%
GAGAGAGAAAGAGAGAGACT+AGG - chr7_3:69437716-69437735 None:intergenic 45.0%
! ATGCTTTTCATCAGCAGCCA+TGG - chr7_3:69437847-69437866 None:intergenic 45.0%
GGATCAAACCTGAATCCAAC+AGG - chr7_3:69437903-69437922 None:intergenic 45.0%
ACAGGACATTTGGAAGAGGT+TGG - chr7_3:69437974-69437993 None:intergenic 45.0%
TCTGACAGGACATTTGGAAG+AGG - chr7_3:69437978-69437997 None:intergenic 45.0%
! AAACCTTTTGGCAGCTTCCA+TGG - chr7_3:69438023-69438042 None:intergenic 45.0%
GGACCTCTTCAAAGCATATG+AGG + chr7_3:69438236-69438255 Msa1120200:CDS 45.0%
GATGCAAGAAGAGCTGGAAA+TGG + chr7_3:69438301-69438320 Msa1120200:CDS 45.0%
GAAGAGCTGGAAATGGTGAA+TGG + chr7_3:69438308-69438327 Msa1120200:CDS 45.0%
GTTTACTGGAGAATGCAAGG+AGG + chr7_3:69438400-69438419 Msa1120200:CDS 45.0%
! AAGCTCTGATGACACAATGG+AGG + chr7_3:69438428-69438447 Msa1120200:CDS 45.0%
ATGTAGGTGTACTCAGCTGT+AGG + chr7_3:69439158-69439177 Msa1120200:intron 45.0%
ATCAATCACTGTTGGTGTGG+GGG - chr7_3:69439231-69439250 None:intergenic 45.0%
AGAGACACTTGCATCTTCCA+TGG - chr7_3:69439258-69439277 None:intergenic 45.0%
CAGGAATTGAGGTTTGTGCT+TGG + chr7_3:69439479-69439498 Msa1120200:three_prime_UTR 45.0%
ACTCAGCTGTAGGTGCCTAT+CGG + chr7_3:69439168-69439187 Msa1120200:CDS 50.0%
ACATGAGTTCATGGAGAGGG+AGG - chr7_3:69439287-69439306 None:intergenic 50.0%
ACTCAGCTGTAGGTGCCTAT+CGG + chr7_3:69439168-69439187 Msa1120200:CDS 50.0%
ACATGAGTTCATGGAGAGGG+AGG - chr7_3:69439287-69439306 None:intergenic 50.0%
GAGCCATGGAAGCTGCCAAA+AGG + chr7_3:69438017-69438036 Msa1120200:CDS 55.0%
AGTTCATGGAGAGGGAGGAG+GGG - chr7_3:69439282-69439301 None:intergenic 55.0%
GAGTTCATGGAGAGGGAGGA+GGG - chr7_3:69439283-69439302 None:intergenic 55.0%
TGAGTTCATGGAGAGGGAGG+AGG - chr7_3:69439284-69439303 None:intergenic 55.0%
GAGCCATGGAAGCTGCCAAA+AGG + chr7_3:69438017-69438036 Msa1120200:CDS 55.0%
AGTTCATGGAGAGGGAGGAG+GGG - chr7_3:69439282-69439301 None:intergenic 55.0%
GAGTTCATGGAGAGGGAGGA+GGG - chr7_3:69439283-69439302 None:intergenic 55.0%
TGAGTTCATGGAGAGGGAGG+AGG - chr7_3:69439284-69439303 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 69437674 69439607 69437674 ID=Msa1120200;Name=Msa1120200
chr7_3 mRNA 69437674 69439607 69437674 ID=Msa1120200-mRNA-1;Parent=Msa1120200;Name=Msa1120200-mRNA-1;_AED=0.08;_eAED=0.08;_QI=172|1|1|1|1|1|3|309|196
chr7_3 exon 69437674 69438038 69437674 ID=Msa1120200-mRNA-1:exon:17565;Parent=Msa1120200-mRNA-1
chr7_3 exon 69438230 69438492 69438230 ID=Msa1120200-mRNA-1:exon:17566;Parent=Msa1120200-mRNA-1
chr7_3 exon 69439164 69439607 69439164 ID=Msa1120200-mRNA-1:exon:17567;Parent=Msa1120200-mRNA-1
chr7_3 five_prime_UTR 69437674 69437845 69437674 ID=Msa1120200-mRNA-1:five_prime_utr;Parent=Msa1120200-mRNA-1
chr7_3 CDS 69437846 69438038 69437846 ID=Msa1120200-mRNA-1:cds;Parent=Msa1120200-mRNA-1
chr7_3 CDS 69438230 69438492 69438230 ID=Msa1120200-mRNA-1:cds;Parent=Msa1120200-mRNA-1
chr7_3 CDS 69439164 69439298 69439164 ID=Msa1120200-mRNA-1:cds;Parent=Msa1120200-mRNA-1
chr7_3 three_prime_UTR 69439299 69439607 69439299 ID=Msa1120200-mRNA-1:three_prime_utr;Parent=Msa1120200-mRNA-1
Gene Sequence

>Msa1120200

ATGGCTGCTGATGAAAAGCATAGTGAGCTAGTTTTGGAAGATGGTATGAAATTACCTGTTGGATTCAGGTTTGATCCAACTGATCATGAGTTTGTAGATTATTATCTGACGAGGAAAGTCTGTAACCAACCTCTTCCAAATGTCCTGTCAGAATTCGATGTATTTCAAACTGAGCCATGGAAGCTGCCAAAAGATAATAGGACCTCTTCAAAGCATATGAGGTACTATTTCTTTGATATCAGGAACCGTAGGTTCGAAAATATGGATGCAAGAAGAGCTGGAAATGGTGAATGGAGAATATATGAGAGGAACGAGGAGTTTGCTCTTTCAAACAATCAATTGATTGCGAGAAAGAACACATTTGTTTACTGGAGAATGCAAGGAGGAAATCAAGCTCTGATGACACAATGGAGGATGCATGAATTTGTCATCGGTACAATTTTTCATCAAACTAAGGTGTACTCAGCTGTAGGTGCCTATCGGATATTTAAGATGAAGGTGGCAAAAGCTGAGAAGAAAGCCCCCACACCAACAGTGATTGATTTCACCATGGAAGATGCAAGTGTCTCTGCCCCTCCTCCCTCTCCATGA
Protein sequence

>Msa1120200

MAADEKHSELVLEDGMKLPVGFRFDPTDHEFVDYYLTRKVCNQPLPNVLSEFDVFQTEPWKLPKDNRTSSKHMRYYFFDIRNRRFENMDARRAGNGEWRIYERNEEFALSNNQLIARKNTFVYWRMQGGNQALMTQWRMHEFVIGTIFHQTKVYSAVGAYRIFKMKVAKAEKKAPTPTVIDFTMEDASVSAPPPSP*