Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121960 | XP_003624928.1 | 97.297 | 444 | 11 | 1 | 1 | 443 | 4 | 447 | 0.0 | 888 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121960 | sp|Q9FHK9|MD26B_ARATH | 47.300 | 463 | 192 | 11 | 3 | 443 | 4 | 436 | 9.24e-121 | 362 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121960 | G7L5V2 | 97.297 | 444 | 11 | 1 | 1 | 443 | 4 | 447 | 0.0 | 888 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1121960 | TR | IWS1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121960 | MtrunA17_Chr7g0255811 | 97.297 | 444 | 11 | 1 | 1 | 443 | 1 | 444 | 0.0 | 887 |
| Msa1121960 | MtrunA17_Chr3g0129551 | 33.175 | 211 | 120 | 6 | 6 | 208 | 3 | 200 | 3.27e-23 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121960 | AT5G05140.1 | 47.300 | 463 | 192 | 11 | 3 | 443 | 4 | 436 | 9.39e-122 | 362 |
| Msa1121960 | AT3G10820.1 | 42.361 | 432 | 202 | 8 | 3 | 433 | 7 | 392 | 5.22e-90 | 279 |
| Msa1121960 | AT3G10820.2 | 42.361 | 432 | 202 | 8 | 3 | 433 | 7 | 392 | 3.62e-87 | 277 |
| Msa1121960 | AT5G09850.1 | 33.178 | 214 | 117 | 6 | 6 | 208 | 3 | 201 | 2.87e-22 | 97.8 |
| Msa1121960 | AT5G09850.4 | 33.178 | 214 | 117 | 6 | 6 | 208 | 3 | 201 | 2.87e-22 | 97.8 |
| Msa1121960 | AT5G09850.2 | 33.178 | 214 | 117 | 6 | 6 | 208 | 3 | 201 | 2.87e-22 | 97.8 |
| Msa1121960 | AT5G09850.5 | 33.178 | 214 | 117 | 6 | 6 | 208 | 3 | 201 | 2.87e-22 | 97.8 |
| Msa1121960 | AT5G09850.3 | 33.178 | 214 | 117 | 6 | 6 | 208 | 3 | 201 | 1.11e-21 | 96.3 |
Find 145 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTCCAAGCTATTGAATTT+TGG | 0.116061 | 7_3:+72068650 | None:intergenic |
| TGCTTTCGCCAAACATTTAA+TGG | 0.140548 | 7_3:-72069106 | Msa1121960:three_prime_UTR |
| CCAAAGCTGTAATTGCTAAT+AGG | 0.172892 | 7_3:+72071346 | None:intergenic |
| CCATTGCCGATTGTGATTTC+CGG | 0.189148 | 7_3:+72069219 | None:intergenic |
| TTCAACAACAGATGGATTTC+TGG | 0.196234 | 7_3:+72070255 | None:intergenic |
| ATTGTTTATTATAACATATT+TGG | 0.196786 | 7_3:-72071734 | Msa1121960:five_prime_UTR |
| ATTTCTATTGACAATAATTA+TGG | 0.200682 | 7_3:+72068857 | None:intergenic |
| TCATTTGGGTCATTGAAAAT+TGG | 0.218670 | 7_3:+72071785 | None:intergenic |
| AATTGGTTTGATTCTTCTTC+AGG | 0.261010 | 7_3:+72071802 | None:intergenic |
| CATTGCCGATTGTGATTTCC+GGG | 0.275321 | 7_3:+72069220 | None:intergenic |
| CATTTATATTACTTGCATTA+AGG | 0.279858 | 7_3:-72068802 | Msa1121960:three_prime_UTR |
| ACTTTGATCGAAACACAATT+TGG | 0.284098 | 7_3:+72072578 | None:intergenic |
| AATTTCAAATCCAATATTCT+TGG | 0.292669 | 7_3:+72068919 | None:intergenic |
| TCAGCAGCCATTGGTTTATT+AGG | 0.298615 | 7_3:+72069721 | None:intergenic |
| TTACTTTCGTTCATCTAATT+CGG | 0.313641 | 7_3:-72071632 | Msa1121960:CDS |
| TCTTCTATCCATTAAATGTT+TGG | 0.320005 | 7_3:+72069098 | None:intergenic |
| TATGTAATAAGCAGGTTTAT+AGG | 0.329790 | 7_3:-72068704 | Msa1121960:three_prime_UTR |
| AAACCAATGGCTGCTGATAC+TGG | 0.331234 | 7_3:-72069715 | Msa1121960:CDS |
| TAAAAGTACTTCTTTCTTGT+TGG | 0.333050 | 7_3:-72072500 | Msa1121960:five_prime_UTR |
| CCTATTAGCAATTACAGCTT+TGG | 0.340233 | 7_3:-72071346 | Msa1121960:CDS |
| CAAAGCTGTAATTGCTAATA+GGG | 0.344245 | 7_3:+72071347 | None:intergenic |
| TTGGAGTTCCATGGCTTACT+TGG | 0.351974 | 7_3:-72068886 | Msa1121960:three_prime_UTR |
| TTTGAAATTTGATCCTATCT+TGG | 0.352247 | 7_3:-72068905 | Msa1121960:three_prime_UTR |
| CTCCTAGACTTAAACTCCTT+TGG | 0.357491 | 7_3:+72071559 | None:intergenic |
| GCTTTCTTTGTTGCCCCAAC+TGG | 0.358676 | 7_3:-72070184 | Msa1121960:CDS |
| AGTTATCAACAAGCTGAAAA+TGG | 0.359783 | 7_3:-72069445 | Msa1121960:intron |
| TTGTATTGTCCTTTGCCTCT+TGG | 0.365164 | 7_3:+72069303 | None:intergenic |
| AGGACTCCCGTCACCTCCTT+TGG | 0.378418 | 7_3:-72070215 | Msa1121960:CDS |
| AATTTGCAGTCAACTGAGAT+TGG | 0.383050 | 7_3:-72070880 | Msa1121960:intron |
| GATCGAAACACAATTTGGTT+TGG | 0.387627 | 7_3:+72072583 | None:intergenic |
| CGCTGAATGTTTGAGTTTAG+CGG | 0.388633 | 7_3:+72069682 | None:intergenic |
| CTCTTGAAGTCTCCGCTTAG+TGG | 0.392632 | 7_3:+72069468 | None:intergenic |
| CGTTGGACAGACCCTTGCTT+TGG | 0.393563 | 7_3:+72069259 | None:intergenic |
| TGTTATGCTGAATCGTTGTA+AGG | 0.399819 | 7_3:-72071509 | Msa1121960:CDS |
| GTGCTGACTCTTGTTGTCCT+TGG | 0.405815 | 7_3:+72069771 | None:intergenic |
| GTTTCCAAAATTCAATAGCT+TGG | 0.413093 | 7_3:-72068654 | Msa1121960:three_prime_UTR |
| TTGTCACGGTTCTTGTTGAA+TGG | 0.419455 | 7_3:+72069871 | None:intergenic |
| TGAATTGTGATGATACCTTT+TGG | 0.420252 | 7_3:+72072545 | None:intergenic |
| GTACTCAAAGTTTAAACCTT+GGG | 0.422898 | 7_3:+72068959 | None:intergenic |
| GATTGCAGTAGGGAAGAAAA+TGG | 0.423504 | 7_3:-72071385 | Msa1121960:CDS |
| GTCTAAGTGTTCAGATGATT+CGG | 0.425620 | 7_3:-72069503 | Msa1121960:CDS |
| CGGAAATCACAATCGGCAAT+GGG | 0.431117 | 7_3:-72069218 | Msa1121960:CDS |
| AGAGTTCAATTGTACCAGTT+GGG | 0.432169 | 7_3:+72070170 | None:intergenic |
| AGCTCTTGGCTCTCAAACTA+AGG | 0.432229 | 7_3:-72069836 | Msa1121960:CDS |
| TTGGGATTGAAGATGAAGTC+AGG | 0.434760 | 7_3:-72071676 | Msa1121960:exon |
| GATCCTATCTTGGAGTTCCA+TGG | 0.440157 | 7_3:-72068895 | Msa1121960:three_prime_UTR |
| CCGTCACCTCCTTTGGATGA+AGG | 0.458747 | 7_3:-72070208 | Msa1121960:CDS |
| AAGCCATGGAACTCCAAGAT+AGG | 0.459595 | 7_3:+72068892 | None:intergenic |
| TGAGAGTTCGTGCTAGTTGA+CGG | 0.465786 | 7_3:+72070815 | None:intergenic |
| CTGGCTTTCTTCCGTTGTCA+CGG | 0.466235 | 7_3:+72069857 | None:intergenic |
| CGTCACCTCCTTTGGATGAA+GGG | 0.466548 | 7_3:-72070207 | Msa1121960:CDS |
| AACGGAAGAAAGCCAGCTCT+TGG | 0.469024 | 7_3:-72069850 | Msa1121960:CDS |
| CATGTGATTATGTAATAAGC+AGG | 0.469847 | 7_3:-72068712 | Msa1121960:three_prime_UTR |
| ATGTTTGTAGCTTCAGAAGA+AGG | 0.472561 | 7_3:-72070289 | Msa1121960:intron |
| AGCATGTTCTCTAAAGATGA+AGG | 0.472793 | 7_3:-72069144 | Msa1121960:three_prime_UTR |
| TCATCACCATTATCATCATC+AGG | 0.473283 | 7_3:+72071460 | None:intergenic |
| GTTTGAAATGTGTATTCCGT+TGG | 0.475671 | 7_3:+72069242 | None:intergenic |
| GAGTTTAAGTCTAGGAGAGA+TGG | 0.491402 | 7_3:-72071553 | Msa1121960:CDS |
| TGTACTCAAAGTTTAAACCT+TGG | 0.494198 | 7_3:+72068958 | None:intergenic |
| ACAGATGGATTTCTGGAATC+CGG | 0.496893 | 7_3:+72070262 | None:intergenic |
| GCAAAGGACAATACAAGTAA+TGG | 0.500794 | 7_3:-72069296 | Msa1121960:CDS |
| CCGGAAATCACAATCGGCAA+TGG | 0.503234 | 7_3:-72069219 | Msa1121960:CDS |
| TTAGTTTGAGAGCCAAGAGC+TGG | 0.503363 | 7_3:+72069838 | None:intergenic |
| CAAGAGAAGTTCTGTTAGAG+AGG | 0.509666 | 7_3:-72071431 | Msa1121960:CDS |
| AAGATTATACCTCATCTTCA+CGG | 0.513302 | 7_3:+72071239 | None:intergenic |
| GTTGAAAATGAAGAGGAAGA+AGG | 0.514724 | 7_3:-72070238 | Msa1121960:CDS |
| TGCTGCTTCTGATTGTCCAA+AGG | 0.514908 | 7_3:-72071575 | Msa1121960:CDS |
| GCTGGTCAATGCGTGGGTGA+AGG | 0.515961 | 7_3:-72070439 | Msa1121960:CDS |
| AAAGTCAAAACTCAACCAAA+AGG | 0.516610 | 7_3:-72072560 | Msa1121960:five_prime_UTR |
| AGAGCAAGGTGGATTGCAGT+AGG | 0.520399 | 7_3:-72071396 | Msa1121960:CDS |
| TTTCTATGCTCTCAAGGAGG+GGG | 0.522651 | 7_3:+72069066 | None:intergenic |
| GCAATCACAACTTGCTGCTG+AGG | 0.525782 | 7_3:-72071290 | Msa1121960:CDS |
| CGGCCAGTATCAGCAGCCAT+TGG | 0.526346 | 7_3:+72069712 | None:intergenic |
| CACAATCGGCAATGGGGCAA+CGG | 0.528995 | 7_3:-72069211 | Msa1121960:CDS |
| CTTGTTGTCCTTGGCAGTGA+CGG | 0.530853 | 7_3:+72069780 | None:intergenic |
| AAAACAGTACTGTCGCTAAG+AGG | 0.533023 | 7_3:-72069621 | Msa1121960:CDS |
| ATAAATGATCTTCCAAAGCA+AGG | 0.538473 | 7_3:-72069271 | Msa1121960:CDS |
| GTCACCTCCTTTGGATGAAG+GGG | 0.541178 | 7_3:-72070206 | Msa1121960:CDS |
| GTGAATCATCTAAGAAAGCA+TGG | 0.544384 | 7_3:-72070850 | Msa1121960:CDS |
| GGTTTAAACTTTGAGTACAT+AGG | 0.545160 | 7_3:-72068954 | Msa1121960:three_prime_UTR |
| GGGTGCTAGCAAAGAGAGCA+AGG | 0.546467 | 7_3:-72071410 | Msa1121960:CDS |
| CTGCTGATACTGGCCGTGCA+AGG | 0.551930 | 7_3:-72069705 | Msa1121960:CDS |
| TAATTGCAGCCAAGAGGCAA+AGG | 0.553434 | 7_3:-72069312 | Msa1121960:intron |
| TCAAACCCGGAAATCACAAT+CGG | 0.553682 | 7_3:-72069225 | Msa1121960:CDS |
| TTGAGTTTAGCGGCCTTGCA+CGG | 0.554510 | 7_3:+72069692 | None:intergenic |
| TGTAAAGTTCTTCGATGGCA+TGG | 0.555348 | 7_3:-72070038 | Msa1121960:intron |
| ATCTGTTGTTGAAAATGAAG+AGG | 0.562068 | 7_3:-72070245 | Msa1121960:CDS |
| CATGTTGCTACAGTCTGACT+CGG | 0.562250 | 7_3:-72071057 | Msa1121960:intron |
| ACGGCTGTTTCATTAGATGC+CGG | 0.562358 | 7_3:+72069799 | None:intergenic |
| TAAATGATCTTCCAAAGCAA+GGG | 0.564834 | 7_3:-72069270 | Msa1121960:CDS |
| AGGCATCTTCGGCTCCACAT+TGG | 0.566230 | 7_3:+72069654 | None:intergenic |
| GAGAGTTCAATTGTACCAGT+TGG | 0.566913 | 7_3:+72070169 | None:intergenic |
| CCTTCATCCAAAGGAGGTGA+CGG | 0.567401 | 7_3:+72070208 | None:intergenic |
| CGGAATACACATTTCAAACC+CGG | 0.569195 | 7_3:-72069238 | Msa1121960:CDS |
| TTCGATGGCATGGATGATGA+TGG | 0.571056 | 7_3:-72070028 | Msa1121960:CDS |
| AAAACTGTTACAATCTACAT+AGG | 0.571213 | 7_3:-72072373 | Msa1121960:intron |
| GAGTTCAATTGTACCAGTTG+GGG | 0.574661 | 7_3:+72070171 | None:intergenic |
| CTTCATCCAAAGGAGGTGAC+GGG | 0.575720 | 7_3:+72070209 | None:intergenic |
| TACGTAATGTTGCACTATGA+TGG | 0.577531 | 7_3:+72072411 | None:intergenic |
| TGGTACAATTGAACTCTCAC+AGG | 0.578719 | 7_3:-72070164 | Msa1121960:intron |
| TCTGTGCCTGATGATGATAA+TGG | 0.579961 | 7_3:-72071466 | Msa1121960:CDS |
| GTTATGCTGAATCGTTGTAA+GGG | 0.581949 | 7_3:-72071508 | Msa1121960:CDS |
| GAGCAAGGTGGATTGCAGTA+GGG | 0.582197 | 7_3:-72071395 | Msa1121960:CDS |
| GCTCTCAAACTAAGGACAAG+AGG | 0.585924 | 7_3:-72069828 | Msa1121960:CDS |
| GAATTTACGCAAGCTCATTG+AGG | 0.586247 | 7_3:+72068738 | None:intergenic |
| AAGAAAGCCCCTTCATCCAA+AGG | 0.586587 | 7_3:+72070199 | None:intergenic |
| TTCTAGTGGATGGAAAGAGC+TGG | 0.587363 | 7_3:-72070457 | Msa1121960:intron |
| ACATCTTGCTGAGCATTGAG+AGG | 0.588536 | 7_3:+72069598 | None:intergenic |
| CAAAGCAAGGGTCTGTCCAA+CGG | 0.592243 | 7_3:-72069258 | Msa1121960:CDS |
| GGAACAATCCAAGTAAGCCA+TGG | 0.593320 | 7_3:+72068878 | None:intergenic |
| GAAAATGAAGAGGAAGAAGG+AGG | 0.593730 | 7_3:-72070235 | Msa1121960:CDS |
| TGGGATTGAAGATGAAGTCA+GGG | 0.594781 | 7_3:-72071675 | Msa1121960:exon |
| TCTAAGAAAGCATGGATCGA+AGG | 0.595986 | 7_3:-72070842 | Msa1121960:CDS |
| GAAACATCGATTATTTCCCA+AGG | 0.598777 | 7_3:-72068975 | Msa1121960:three_prime_UTR |
| AAGAGAAGTTCTGTTAGAGA+GGG | 0.600208 | 7_3:-72071430 | Msa1121960:CDS |
| ACTCTCTGTCGATCTTCTGA+AGG | 0.600474 | 7_3:-72070997 | Msa1121960:intron |
| AATGTTGCACTATGATGGTA+TGG | 0.604480 | 7_3:+72072416 | None:intergenic |
| TTCTATGCTCTCAAGGAGGG+GGG | 0.604868 | 7_3:+72069067 | None:intergenic |
| GACGATGTAAAGTTCTTCGA+TGG | 0.605011 | 7_3:-72070043 | Msa1121960:intron |
| AATTCTTAATTGCAGCCAAG+AGG | 0.605234 | 7_3:-72069318 | Msa1121960:intron |
| TCAACAACCACACCTGTCGC+AGG | 0.609609 | 7_3:-72070414 | Msa1121960:intron |
| TGAAACAGCCGTCACTGCCA+AGG | 0.610149 | 7_3:-72069788 | Msa1121960:CDS |
| GCAGTCAACTGAGATTGGAA+AGG | 0.610845 | 7_3:-72070875 | Msa1121960:intron |
| TGCTGTTTGAGTCTCTGAGG+AGG | 0.611179 | 7_3:-72071034 | Msa1121960:CDS |
| CATTCAGCGAAAAGCCAATG+TGG | 0.612860 | 7_3:-72069668 | Msa1121960:CDS |
| TCTCAATAACCGTGAAGATG+AGG | 0.613333 | 7_3:-72071248 | Msa1121960:intron |
| AATTCTACCTGCGACAGGTG+TGG | 0.614711 | 7_3:+72070407 | None:intergenic |
| TAGGGAAGAAAATGGAGTGA+CGG | 0.617217 | 7_3:-72071377 | Msa1121960:CDS |
| CAGGGTCACTTGATCAGTGG+AGG | 0.617583 | 7_3:-72071657 | Msa1121960:CDS |
| TTCAACAAGAACCGTGACAA+CGG | 0.624350 | 7_3:-72069868 | Msa1121960:CDS |
| GGAAAGAGCTGGTCAATGCG+TGG | 0.625905 | 7_3:-72070446 | Msa1121960:CDS |
| GTCCAAAGGAGTTTAAGTCT+AGG | 0.627009 | 7_3:-72071561 | Msa1121960:CDS |
| CGGTGCTGTTTGAGTCTCTG+AGG | 0.632670 | 7_3:-72071037 | Msa1121960:CDS |
| GAAAGAGCTGGTCAATGCGT+GGG | 0.636719 | 7_3:-72070445 | Msa1121960:CDS |
| GGTGAGGCCTAATAAACCAA+TGG | 0.639487 | 7_3:-72069728 | Msa1121960:CDS |
| TCGTTGTAAGGGGTGTGAGA+AGG | 0.640457 | 7_3:-72071497 | Msa1121960:CDS |
| AAGCAGCAACAACAATTGCA+TGG | 0.641026 | 7_3:+72071590 | None:intergenic |
| AGTCAGGGTCACTTGATCAG+TGG | 0.646882 | 7_3:-72071660 | Msa1121960:CDS |
| AGCTTCAGAAGAAGGCACAC+CGG | 0.647483 | 7_3:-72070281 | Msa1121960:CDS |
| TTATGCTGAATCGTTGTAAG+GGG | 0.662020 | 7_3:-72071507 | Msa1121960:CDS |
| GGCAACGGTCGAAGATAGAG+CGG | 0.681487 | 7_3:-72069196 | Msa1121960:exon |
| AAAGCCCCTTCATCCAAAGG+AGG | 0.683333 | 7_3:+72070202 | None:intergenic |
| GGAAATCACAATCGGCAATG+GGG | 0.692012 | 7_3:-72069217 | Msa1121960:CDS |
| CTAAGCTTGAAGCCACTAAG+CGG | 0.697672 | 7_3:-72069480 | Msa1121960:CDS |
| TGCTAGCAAAGAGAGCAAGG+TGG | 0.724881 | 7_3:-72071407 | Msa1121960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTTAAATTTGATATTCT+GGG | + | chr7_3:72069353-72069372 | None:intergenic | 10.0% |
| !! | TTAATTTAAATTTGATATTC+TGG | + | chr7_3:72069354-72069373 | None:intergenic | 10.0% |
| !! | ATTGTTTATTATAACATATT+TGG | - | chr7_3:72069561-72069580 | Msa1121960:intron | 10.0% |
| !!! | CTTTATTGTTTTGTTTTTTA+AGG | + | chr7_3:72069067-72069086 | None:intergenic | 15.0% |
| !! | CTTAAAAAACAAAACAATAA+AGG | - | chr7_3:72069065-72069084 | Msa1121960:three_prime_UTR | 15.0% |
| !! | AATTTAAATTTGATATTCTG+GGG | + | chr7_3:72069352-72069371 | None:intergenic | 15.0% |
| !! | ATTACAAAATTAATTCATGT+TGG | - | chr7_3:72070969-72070988 | Msa1121960:intron | 15.0% |
| !!! | TTAAATTGATGATTGTAAAT+GGG | - | chr7_3:72071370-72071389 | Msa1121960:CDS | 15.0% |
| !! | ATTTCTATTGACAATAATTA+TGG | + | chr7_3:72072441-72072460 | None:intergenic | 15.0% |
| !! | CTAAAAAAAAGCGAAATTTA+AGG | + | chr7_3:72069031-72069050 | None:intergenic | 20.0% |
| !!! | AACTCAATTTTTTCTCATTT+GGG | + | chr7_3:72069527-72069546 | None:intergenic | 20.0% |
| !!! | AAACTCAATTTTTTCTCATT+TGG | + | chr7_3:72069528-72069547 | None:intergenic | 20.0% |
| !!! | ATTGATTCTTTTGTTGTTTT+GGG | - | chr7_3:72069601-72069620 | Msa1121960:CDS | 20.0% |
| !!! | AGTATGATTTAGTTTTTTCA+TGG | - | chr7_3:72070506-72070525 | Msa1121960:intron | 20.0% |
| !!! | TGGTTTATTTTATACAATCA+TGG | - | chr7_3:72070554-72070573 | Msa1121960:intron | 20.0% |
| !! | AAAATGGTTCAAATTAACTA+AGG | + | chr7_3:72070641-72070660 | None:intergenic | 20.0% |
| !! | GATATGAATCAAAACAATAA+CGG | + | chr7_3:72070729-72070748 | None:intergenic | 20.0% |
| !!! | ATCTGTTAAATGTTTTCAAT+TGG | - | chr7_3:72070771-72070790 | Msa1121960:intron | 20.0% |
| !!! | TAATCTTTTCTAATTTCTAG+TGG | - | chr7_3:72070824-72070843 | Msa1121960:CDS | 20.0% |
| !! | TTGAAATATAAGTTTGAGAA+TGG | + | chr7_3:72071179-72071198 | None:intergenic | 20.0% |
| !! | TTCTCAAACTTATATTTCAA+AGG | - | chr7_3:72071179-72071198 | Msa1121960:intron | 20.0% |
| !! | TGTATATATGAAACTGAATT+TGG | - | chr7_3:72071203-72071222 | Msa1121960:intron | 20.0% |
| !! | GTATATATGAAACTGAATTT+GGG | - | chr7_3:72071204-72071223 | Msa1121960:intron | 20.0% |
| !!! | CTTAAATTGATGATTGTAAA+TGG | - | chr7_3:72071369-72071388 | Msa1121960:CDS | 20.0% |
| !!! | TAAATTGATGATTGTAAATG+GGG | - | chr7_3:72071371-72071390 | Msa1121960:CDS | 20.0% |
| !! | TAACTCTATTCAAGTAAAAA+TGG | + | chr7_3:72072273-72072292 | None:intergenic | 20.0% |
| !!! | TTTTGTTTATCCAAGAATAT+TGG | - | chr7_3:72072366-72072385 | Msa1121960:intron | 20.0% |
| !! | AATTTCAAATCCAATATTCT+TGG | + | chr7_3:72072379-72072398 | None:intergenic | 20.0% |
| !! | CATTTATATTACTTGCATTA+AGG | - | chr7_3:72072493-72072512 | Msa1121960:five_prime_UTR | 20.0% |
| !!! | TTGAATTTTGGAAACATTAT+AGG | + | chr7_3:72072636-72072655 | None:intergenic | 20.0% |
| !!! | TAAAAGTACTTCTTTCTTGT+TGG | - | chr7_3:72068795-72068814 | Msa1121960:three_prime_UTR | 25.0% |
| ! | AAAACTGTTACAATCTACAT+AGG | - | chr7_3:72068922-72068941 | Msa1121960:three_prime_UTR | 25.0% |
| !! | TTCTTCTTGTTAGATTTTTC+AGG | - | chr7_3:72068992-72069011 | Msa1121960:three_prime_UTR | 25.0% |
| !!! | AAGGTTATTTCTTCTTTTTG+AGG | - | chr7_3:72069084-72069103 | Msa1121960:three_prime_UTR | 25.0% |
| !!! | TTTCTTCTTTTTGAGGTTTT+TGG | - | chr7_3:72069091-72069110 | Msa1121960:three_prime_UTR | 25.0% |
| !! | TGTATTGTTTCACATTTTTC+TGG | + | chr7_3:72069129-72069148 | None:intergenic | 25.0% |
| ! | AATTTGATTGGATCAATGTT+CGG | + | chr7_3:72069314-72069333 | None:intergenic | 25.0% |
| !! | TCCAATCAAATTTTCCTAAA+TGG | - | chr7_3:72069322-72069341 | Msa1121960:intron | 25.0% |
| !! | CCAATCAAATTTTCCTAAAT+GGG | - | chr7_3:72069323-72069342 | Msa1121960:intron | 25.0% |
| !!! | TTTCGTCATTGTTTTATTCA+GGG | - | chr7_3:72069457-72069476 | Msa1121960:CDS | 25.0% |
| !!! | AAAAATTGAGTTTTGAATCG+TGG | - | chr7_3:72069535-72069554 | Msa1121960:intron | 25.0% |
| !!! | AAAATTGAGTTTTGAATCGT+GGG | - | chr7_3:72069536-72069555 | Msa1121960:intron | 25.0% |
| !!! | GATTGATTCTTTTGTTGTTT+TGG | - | chr7_3:72069600-72069619 | Msa1121960:CDS | 25.0% |
| ! | TTACTTTCGTTCATCTAATT+CGG | - | chr7_3:72069663-72069682 | Msa1121960:CDS | 25.0% |
| ! | AATTCATTTGATGTGATTCT+TGG | - | chr7_3:72070113-72070132 | Msa1121960:intron | 25.0% |
| !!! | ATGTCTTGATATGGTTTTTT+TGG | - | chr7_3:72070143-72070162 | Msa1121960:intron | 25.0% |
| !! | AACAATCTTAAAAAAAGCAC+TGG | + | chr7_3:72070374-72070393 | None:intergenic | 25.0% |
| ! | TCACTATCATTACATAATCA+TGG | - | chr7_3:72070601-72070620 | Msa1121960:intron | 25.0% |
| !!! | AGTTTAGAATTTGAGTTGTT+CGG | + | chr7_3:72070800-72070819 | None:intergenic | 25.0% |
| !! | TTTTATCTACCTTATTAGTG+TGG | - | chr7_3:72070911-72070930 | Msa1121960:intron | 25.0% |
| ! | ATAAGTTTGAGAATGGAAAA+AGG | + | chr7_3:72071172-72071191 | None:intergenic | 25.0% |
| ! | TCTTCTATCCATTAAATGTT+TGG | + | chr7_3:72072200-72072219 | None:intergenic | 25.0% |
| !!! | TAGAGTTATTTTGATTGTAG+AGG | - | chr7_3:72072285-72072304 | Msa1121960:intron | 25.0% |
| !!! | AGAGTTATTTTGATTGTAGA+GGG | - | chr7_3:72072286-72072305 | Msa1121960:intron | 25.0% |
| !! | TTTGAAATTTGATCCTATCT+TGG | - | chr7_3:72072390-72072409 | Msa1121960:five_prime_UTR | 25.0% |
| ! | TATGTAATAAGCAGGTTTAT+AGG | - | chr7_3:72072591-72072610 | Msa1121960:five_prime_UTR | 25.0% |
| ACTTTGATCGAAACACAATT+TGG | + | chr7_3:72068720-72068739 | None:intergenic | 30.0% | |
| AAAGTCAAAACTCAACCAAA+AGG | - | chr7_3:72068735-72068754 | Msa1121960:three_prime_UTR | 30.0% | |
| ! | TGAATTGTGATGATACCTTT+TGG | + | chr7_3:72068753-72068772 | None:intergenic | 30.0% |
| !! | CTTTTAGAGAGAGAAAGAAA+GGG | + | chr7_3:72068781-72068800 | None:intergenic | 30.0% |
| !! | ACTTTTAGAGAGAGAAAGAA+AGG | + | chr7_3:72068782-72068801 | None:intergenic | 30.0% |
| !!! | GTGTTGTTTTCTTTTGTTTC+TGG | - | chr7_3:72069202-72069221 | Msa1121960:CDS | 30.0% |
| !! | TTTTGGATTTGGAACAGATT+CGG | + | chr7_3:72069247-72069266 | None:intergenic | 30.0% |
| !!! | TGATGATATGGTTTTGGATT+TGG | + | chr7_3:72069258-72069277 | None:intergenic | 30.0% |
| !! | TGATGATGATGATATGGTTT+TGG | + | chr7_3:72069264-72069283 | None:intergenic | 30.0% |
| ! | TGATGATGATGATGATGATA+TGG | + | chr7_3:72069270-72069289 | None:intergenic | 30.0% |
| CCCATTTAGGAAAATTTGAT+TGG | + | chr7_3:72069326-72069345 | None:intergenic | 30.0% | |
| TGACGAAAGAATGATCAAAA+GGG | + | chr7_3:72069445-72069464 | None:intergenic | 30.0% | |
| ATGACGAAAGAATGATCAAA+AGG | + | chr7_3:72069446-72069465 | None:intergenic | 30.0% | |
| !! | CTTTCGTCATTGTTTTATTC+AGG | - | chr7_3:72069456-72069475 | Msa1121960:CDS | 30.0% |
| !! | AATTGGTTTGATTCTTCTTC+AGG | + | chr7_3:72069496-72069515 | None:intergenic | 30.0% |
| TCATTTGGGTCATTGAAAAT+TGG | + | chr7_3:72069513-72069532 | None:intergenic | 30.0% | |
| CAAAGCTGTAATTGCTAATA+GGG | + | chr7_3:72069951-72069970 | None:intergenic | 30.0% | |
| AAGATTATACCTCATCTTCA+CGG | + | chr7_3:72070059-72070078 | None:intergenic | 30.0% | |
| ATTTGATGTGATTCTTGGAA+AGG | - | chr7_3:72070118-72070137 | Msa1121960:intron | 30.0% | |
| !!! | CTTGATATGGTTTTTTTGGA+TGG | - | chr7_3:72070147-72070166 | Msa1121960:intron | 30.0% |
| !! | GCATTTTTGTTCTTGTTTGA+AGG | - | chr7_3:72070169-72070188 | Msa1121960:CDS | 30.0% |
| ! | TGAATCTTTCTTTGTTGCTT+TGG | - | chr7_3:72070328-72070347 | Msa1121960:intron | 30.0% |
| !! | GAATCTTTCTTTGTTGCTTT+GGG | - | chr7_3:72070329-72070348 | Msa1121960:intron | 30.0% |
| !! | AATCTTTCTTTGTTGCTTTG+GGG | - | chr7_3:72070330-72070349 | Msa1121960:intron | 30.0% |
| CACATGACTAACTAAGAAAA+TGG | + | chr7_3:72070657-72070676 | None:intergenic | 30.0% | |
| ! | TCATTCACCTATCTAAAGTT+TGG | + | chr7_3:72070701-72070720 | None:intergenic | 30.0% |
| !!! | CTTTTCTAATTTCTAGTGGA+TGG | - | chr7_3:72070828-72070847 | Msa1121960:CDS | 30.0% |
| TCATCAATACCACACTAATA+AGG | + | chr7_3:72070923-72070942 | None:intergenic | 30.0% | |
| ATTGATGAGTACAATTATGC+TGG | - | chr7_3:72070935-72070954 | Msa1121960:intron | 30.0% | |
| ! | TCTTCATTTTCAACAACAGA+TGG | + | chr7_3:72071051-72071070 | None:intergenic | 30.0% |
| ATCTGTTGTTGAAAATGAAG+AGG | - | chr7_3:72071050-72071069 | Msa1121960:intron | 30.0% | |
| TTCCTTGTGTTGTATATATC+TGG | - | chr7_3:72071230-72071249 | Msa1121960:intron | 30.0% | |
| ! | AATCATCAATTTAAGACGAG+GGG | + | chr7_3:72071364-72071383 | None:intergenic | 30.0% |
| ! | CAATCATCAATTTAAGACGA+GGG | + | chr7_3:72071365-72071384 | None:intergenic | 30.0% |
| ! | ACAATCATCAATTTAAGACG+AGG | + | chr7_3:72071366-72071385 | None:intergenic | 30.0% |
| ! | ACAGTACTGTTTTCGATTTT+CGG | + | chr7_3:72071667-72071686 | None:intergenic | 30.0% |
| ! | GCATAAATTTTGCAAGTTTG+TGG | - | chr7_3:72071737-72071756 | Msa1121960:five_prime_UTR | 30.0% |
| !! | CTTCTGAAACGCAAAAATTA+AGG | + | chr7_3:72071773-72071792 | None:intergenic | 30.0% |
| AGTTATCAACAAGCTGAAAA+TGG | - | chr7_3:72071850-72071869 | Msa1121960:intron | 30.0% | |
| ATAAATGATCTTCCAAAGCA+AGG | - | chr7_3:72072024-72072043 | Msa1121960:intron | 30.0% | |
| TAAATGATCTTCCAAAGCAA+GGG | - | chr7_3:72072025-72072044 | Msa1121960:intron | 30.0% | |
| !!! | TGTTATTTTCTATGCTCTCA+AGG | + | chr7_3:72072238-72072257 | None:intergenic | 30.0% |
| GTACTCAAAGTTTAAACCTT+GGG | + | chr7_3:72072339-72072358 | None:intergenic | 30.0% | |
| TGTACTCAAAGTTTAAACCT+TGG | + | chr7_3:72072340-72072359 | None:intergenic | 30.0% | |
| GGTTTAAACTTTGAGTACAT+AGG | - | chr7_3:72072341-72072360 | Msa1121960:intron | 30.0% | |
| CATGTGATTATGTAATAAGC+AGG | - | chr7_3:72072583-72072602 | Msa1121960:five_prime_UTR | 30.0% | |
| GTTTCCAAAATTCAATAGCT+TGG | - | chr7_3:72072641-72072660 | Msa1121960:five_prime_UTR | 30.0% | |
| ! | AACTCCAAGCTATTGAATTT+TGG | + | chr7_3:72072648-72072667 | None:intergenic | 30.0% |
| AAAAAGAGCAACAGAAGATG+TGG | + | chr7_3:72068677-72068696 | None:intergenic | 35.0% | |
| GATCGAAACACAATTTGGTT+TGG | + | chr7_3:72068715-72068734 | None:intergenic | 35.0% | |
| AATGTTGCACTATGATGGTA+TGG | + | chr7_3:72068882-72068901 | None:intergenic | 35.0% | |
| TACGTAATGTTGCACTATGA+TGG | + | chr7_3:72068887-72068906 | None:intergenic | 35.0% | |
| TCAATGTTCGGTAAGAGAAT+TGG | + | chr7_3:72069302-72069321 | None:intergenic | 35.0% | |
| TGTTATGCTGAATCGTTGTA+AGG | - | chr7_3:72069786-72069805 | Msa1121960:CDS | 35.0% | |
| GTTATGCTGAATCGTTGTAA+GGG | - | chr7_3:72069787-72069806 | Msa1121960:CDS | 35.0% | |
| TTATGCTGAATCGTTGTAAG+GGG | - | chr7_3:72069788-72069807 | Msa1121960:CDS | 35.0% | |
| TCATCACCATTATCATCATC+AGG | + | chr7_3:72069838-72069857 | None:intergenic | 35.0% | |
| AAGAGAAGTTCTGTTAGAGA+GGG | - | chr7_3:72069865-72069884 | Msa1121960:CDS | 35.0% | |
| CCAAAGCTGTAATTGCTAAT+AGG | + | chr7_3:72069952-72069971 | None:intergenic | 35.0% | |
| CCTATTAGCAATTACAGCTT+TGG | - | chr7_3:72069949-72069968 | Msa1121960:intron | 35.0% | |
| GGAAAGGATATGTCTTGATA+TGG | - | chr7_3:72070134-72070153 | Msa1121960:intron | 35.0% | |
| !! | ATCTTTCTTTGTTGCTTTGG+GGG | - | chr7_3:72070331-72070350 | Msa1121960:intron | 35.0% |
| AATTTGCAGTCAACTGAGAT+TGG | - | chr7_3:72070415-72070434 | Msa1121960:CDS | 35.0% | |
| GTGAATCATCTAAGAAAGCA+TGG | - | chr7_3:72070445-72070464 | Msa1121960:CDS | 35.0% | |
| ATTGACGCCAAACTTTAGAT+AGG | - | chr7_3:72070691-72070710 | Msa1121960:intron | 35.0% | |
| CTTTAGATAGGTGAATGACT+TGG | - | chr7_3:72070703-72070722 | Msa1121960:intron | 35.0% | |
| TAAAAAATTCTACCTGCGAC+AGG | + | chr7_3:72070896-72070915 | None:intergenic | 35.0% | |
| ATGTTTGTAGCTTCAGAAGA+AGG | - | chr7_3:72071006-72071025 | Msa1121960:CDS | 35.0% | |
| ! | TTCAACAACAGATGGATTTC+TGG | + | chr7_3:72071043-72071062 | None:intergenic | 35.0% |
| GTTGAAAATGAAGAGGAAGA+AGG | - | chr7_3:72071057-72071076 | Msa1121960:intron | 35.0% | |
| AGAGTTCAATTGTACCAGTT+GGG | + | chr7_3:72071128-72071147 | None:intergenic | 35.0% | |
| GTCCAGATATATACAACACA+AGG | + | chr7_3:72071235-72071254 | None:intergenic | 35.0% | |
| ! | TAAGGACAAGAGGAATTTTC+CGG | - | chr7_3:72071477-72071496 | Msa1121960:CDS | 35.0% |
| GTCTAAGTGTTCAGATGATT+CGG | - | chr7_3:72071792-72071811 | Msa1121960:five_prime_UTR | 35.0% | |
| AATTCTTAATTGCAGCCAAG+AGG | - | chr7_3:72071977-72071996 | Msa1121960:intron | 35.0% | |
| GCAAAGGACAATACAAGTAA+TGG | - | chr7_3:72071999-72072018 | Msa1121960:intron | 35.0% | |
| ! | GTTTGAAATGTGTATTCCGT+TGG | + | chr7_3:72072056-72072075 | None:intergenic | 35.0% |
| ! | AGCATGTTCTCTAAAGATGA+AGG | - | chr7_3:72072151-72072170 | Msa1121960:intron | 35.0% |
| TGCTTTCGCCAAACATTTAA+TGG | - | chr7_3:72072189-72072208 | Msa1121960:intron | 35.0% | |
| ! | ATTTTCTATGCTCTCAAGGA+GGG | + | chr7_3:72072234-72072253 | None:intergenic | 35.0% |
| ! | TATTTTCTATGCTCTCAAGG+AGG | + | chr7_3:72072235-72072254 | None:intergenic | 35.0% |
| ! | GAAACATCGATTATTTCCCA+AGG | - | chr7_3:72072320-72072339 | Msa1121960:intron | 35.0% |
| !! | TATTCTGGGGTATCCCATTT+AGG | + | chr7_3:72069339-72069358 | None:intergenic | 40.0% |
| TTGGGATTGAAGATGAAGTC+AGG | - | chr7_3:72069619-72069638 | Msa1121960:CDS | 40.0% | |
| TGGGATTGAAGATGAAGTCA+GGG | - | chr7_3:72069620-72069639 | Msa1121960:CDS | 40.0% | |
| AAGCAGCAACAACAATTGCA+TGG | + | chr7_3:72069708-72069727 | None:intergenic | 40.0% | |
| GTCCAAAGGAGTTTAAGTCT+AGG | - | chr7_3:72069734-72069753 | Msa1121960:CDS | 40.0% | |
| CTCCTAGACTTAAACTCCTT+TGG | + | chr7_3:72069739-72069758 | None:intergenic | 40.0% | |
| GAGTTTAAGTCTAGGAGAGA+TGG | - | chr7_3:72069742-72069761 | Msa1121960:CDS | 40.0% | |
| ! | TCTGTGCCTGATGATGATAA+TGG | - | chr7_3:72069829-72069848 | Msa1121960:CDS | 40.0% |
| CAAGAGAAGTTCTGTTAGAG+AGG | - | chr7_3:72069864-72069883 | Msa1121960:CDS | 40.0% | |
| GATTGCAGTAGGGAAGAAAA+TGG | - | chr7_3:72069910-72069929 | Msa1121960:intron | 40.0% | |
| TAGGGAAGAAAATGGAGTGA+CGG | - | chr7_3:72069918-72069937 | Msa1121960:intron | 40.0% | |
| TCTCAATAACCGTGAAGATG+AGG | - | chr7_3:72070047-72070066 | Msa1121960:intron | 40.0% | |
| ! | TCTAAGAAAGCATGGATCGA+AGG | - | chr7_3:72070453-72070472 | Msa1121960:CDS | 40.0% |
| TGTTTCTTGTCTGCGAATTG+TGG | - | chr7_3:72070534-72070553 | Msa1121960:intron | 40.0% | |
| TGGCGTCAATGTTAACATCA+TGG | + | chr7_3:72070681-72070700 | None:intergenic | 40.0% | |
| !! | ACAGATGGATTTCTGGAATC+CGG | + | chr7_3:72071036-72071055 | None:intergenic | 40.0% |
| GAAAATGAAGAGGAAGAAGG+AGG | - | chr7_3:72071060-72071079 | Msa1121960:intron | 40.0% | |
| GAGTTCAATTGTACCAGTTG+GGG | + | chr7_3:72071127-72071146 | None:intergenic | 40.0% | |
| GAGAGTTCAATTGTACCAGT+TGG | + | chr7_3:72071129-72071148 | None:intergenic | 40.0% | |
| TGGTACAATTGAACTCTCAC+AGG | - | chr7_3:72071131-72071150 | Msa1121960:intron | 40.0% | |
| GACGATGTAAAGTTCTTCGA+TGG | - | chr7_3:72071252-72071271 | Msa1121960:CDS | 40.0% | |
| TGTAAAGTTCTTCGATGGCA+TGG | - | chr7_3:72071257-72071276 | Msa1121960:CDS | 40.0% | |
| ! | CTACCTAGCTTTCGTTGTTA+CGG | - | chr7_3:72071323-72071342 | Msa1121960:CDS | 40.0% |
| TTGTCACGGTTCTTGTTGAA+TGG | + | chr7_3:72071427-72071446 | None:intergenic | 40.0% | |
| TTCAACAAGAACCGTGACAA+CGG | - | chr7_3:72071427-72071446 | Msa1121960:CDS | 40.0% | |
| TCAGCACATGAAGAAAAACG+AGG | - | chr7_3:72071540-72071559 | Msa1121960:CDS | 40.0% | |
| !! | TCAGCAGCCATTGGTTTATT+AGG | + | chr7_3:72071577-72071596 | None:intergenic | 40.0% |
| ! | CGCTGAATGTTTGAGTTTAG+CGG | + | chr7_3:72071616-72071635 | None:intergenic | 40.0% |
| ! | GTACTGTTTTCGATTTTCGG+AGG | + | chr7_3:72071664-72071683 | None:intergenic | 40.0% |
| AAAACAGTACTGTCGCTAAG+AGG | - | chr7_3:72071674-72071693 | Msa1121960:exon | 40.0% | |
| TTGTATTGTCCTTTGCCTCT+TGG | + | chr7_3:72071995-72072014 | None:intergenic | 40.0% | |
| CGGAATACACATTTCAAACC+CGG | - | chr7_3:72072057-72072076 | Msa1121960:intron | 40.0% | |
| TCAAACCCGGAAATCACAAT+CGG | - | chr7_3:72072070-72072089 | Msa1121960:intron | 40.0% | |
| !! | AAGATAGAGCGGCTATTTTC+AGG | - | chr7_3:72072110-72072129 | Msa1121960:intron | 40.0% |
| ! | TTTTCTATGCTCTCAAGGAG+GGG | + | chr7_3:72072233-72072252 | None:intergenic | 40.0% |
| GAATTTACGCAAGCTCATTG+AGG | + | chr7_3:72072560-72072579 | None:intergenic | 40.0% | |
| ! | CCAAGTTTTTCATACGCACG+CGG | - | chr7_3:72068834-72068853 | Msa1121960:three_prime_UTR | 45.0% |
| ! | TTTTCATACGCACGCGGTAT+TGG | - | chr7_3:72068840-72068859 | Msa1121960:three_prime_UTR | 45.0% |
| ! | TGCTGCTTCTGATTGTCCAA+AGG | - | chr7_3:72069720-72069739 | Msa1121960:CDS | 45.0% |
| !!! | AACTTGCTGCTGAGGTTTTG+AGG | - | chr7_3:72070013-72070032 | Msa1121960:intron | 45.0% |
| CATGTTGCTACAGTCTGACT+CGG | - | chr7_3:72070238-72070257 | Msa1121960:CDS | 45.0% | |
| ACTCTCTGTCGATCTTCTGA+AGG | - | chr7_3:72070298-72070317 | Msa1121960:intron | 45.0% | |
| GCAGTCAACTGAGATTGGAA+AGG | - | chr7_3:72070420-72070439 | Msa1121960:CDS | 45.0% | |
| TGAGAGTTCGTGCTAGTTGA+CGG | + | chr7_3:72070483-72070502 | None:intergenic | 45.0% | |
| ! | TTCTAGTGGATGGAAAGAGC+TGG | - | chr7_3:72070838-72070857 | Msa1121960:CDS | 45.0% |
| AAGAAAGCCCCTTCATCCAA+AGG | + | chr7_3:72071099-72071118 | None:intergenic | 45.0% | |
| TTCGATGGCATGGATGATGA+TGG | - | chr7_3:72071267-72071286 | Msa1121960:CDS | 45.0% | |
| GAACCGTAACAACGAAAGCT+AGG | + | chr7_3:72071329-72071348 | None:intergenic | 45.0% | |
| ! | TTAGTTTGAGAGCCAAGAGC+TGG | + | chr7_3:72071460-72071479 | None:intergenic | 45.0% |
| ! | AGCTCTTGGCTCTCAAACTA+AGG | - | chr7_3:72071459-72071478 | Msa1121960:CDS | 45.0% |
| GCTCTCAAACTAAGGACAAG+AGG | - | chr7_3:72071467-72071486 | Msa1121960:CDS | 45.0% | |
| ! | ACGGCTGTTTCATTAGATGC+CGG | + | chr7_3:72071499-72071518 | None:intergenic | 45.0% |
| CATGAAGAAAAACGAGGCTG+CGG | - | chr7_3:72071546-72071565 | Msa1121960:CDS | 45.0% | |
| GGTGAGGCCTAATAAACCAA+TGG | - | chr7_3:72071567-72071586 | Msa1121960:CDS | 45.0% | |
| AAACCAATGGCTGCTGATAC+TGG | - | chr7_3:72071580-72071599 | Msa1121960:CDS | 45.0% | |
| CATTCAGCGAAAAGCCAATG+TGG | - | chr7_3:72071627-72071646 | Msa1121960:CDS | 45.0% | |
| !!! | TCGATTTTCGGAGGCATCTT+CGG | + | chr7_3:72071655-72071674 | None:intergenic | 45.0% |
| !! | ACATCTTGCTGAGCATTGAG+AGG | + | chr7_3:72071700-72071719 | None:intergenic | 45.0% |
| CTAAGCTTGAAGCCACTAAG+CGG | - | chr7_3:72071815-72071834 | Msa1121960:five_prime_UTR | 45.0% | |
| TAATTGCAGCCAAGAGGCAA+AGG | - | chr7_3:72071983-72072002 | Msa1121960:intron | 45.0% | |
| ! | CATTGCCGATTGTGATTTCC+GGG | + | chr7_3:72072078-72072097 | None:intergenic | 45.0% |
| ! | CCATTGCCGATTGTGATTTC+CGG | + | chr7_3:72072079-72072098 | None:intergenic | 45.0% |
| CGGAAATCACAATCGGCAAT+GGG | - | chr7_3:72072077-72072096 | Msa1121960:intron | 45.0% | |
| GGAAATCACAATCGGCAATG+GGG | - | chr7_3:72072078-72072097 | Msa1121960:intron | 45.0% | |
| !! | ATAGAGCGGCTATTTTCAGG+AGG | - | chr7_3:72072113-72072132 | Msa1121960:intron | 45.0% |
| !! | TAGAGCGGCTATTTTCAGGA+GGG | - | chr7_3:72072114-72072133 | Msa1121960:intron | 45.0% |
| TTTCTATGCTCTCAAGGAGG+GGG | + | chr7_3:72072232-72072251 | None:intergenic | 45.0% | |
| GATCCTATCTTGGAGTTCCA+TGG | - | chr7_3:72072400-72072419 | Msa1121960:five_prime_UTR | 45.0% | |
| AAGCCATGGAACTCCAAGAT+AGG | + | chr7_3:72072406-72072425 | None:intergenic | 45.0% | |
| TTGGAGTTCCATGGCTTACT+TGG | - | chr7_3:72072409-72072428 | Msa1121960:five_prime_UTR | 45.0% | |
| GGAACAATCCAAGTAAGCCA+TGG | + | chr7_3:72072420-72072439 | None:intergenic | 45.0% | |
| CCGCGTGCGTATGAAAAACT+TGG | + | chr7_3:72068837-72068856 | None:intergenic | 50.0% | |
| AGTCAGGGTCACTTGATCAG+TGG | - | chr7_3:72069635-72069654 | Msa1121960:CDS | 50.0% | |
| ! | TCGTTGTAAGGGGTGTGAGA+AGG | - | chr7_3:72069798-72069817 | Msa1121960:CDS | 50.0% |
| TGCTAGCAAAGAGAGCAAGG+TGG | - | chr7_3:72069888-72069907 | Msa1121960:CDS | 50.0% | |
| !! | AGAGCAAGGTGGATTGCAGT+AGG | - | chr7_3:72069899-72069918 | Msa1121960:intron | 50.0% |
| !! | GAGCAAGGTGGATTGCAGTA+GGG | - | chr7_3:72069900-72069919 | Msa1121960:intron | 50.0% |
| !! | GCAATCACAACTTGCTGCTG+AGG | - | chr7_3:72070005-72070024 | Msa1121960:intron | 50.0% |
| ! | TGCTGTTTGAGTCTCTGAGG+AGG | - | chr7_3:72070261-72070280 | Msa1121960:CDS | 50.0% |
| GAAAGAGCTGGTCAATGCGT+GGG | - | chr7_3:72070850-72070869 | Msa1121960:CDS | 50.0% | |
| AATTCTACCTGCGACAGGTG+TGG | + | chr7_3:72070891-72070910 | None:intergenic | 50.0% | |
| ! | AGCTTCAGAAGAAGGCACAC+CGG | - | chr7_3:72071014-72071033 | Msa1121960:CDS | 50.0% |
| CTTCATCCAAAGGAGGTGAC+GGG | + | chr7_3:72071089-72071108 | None:intergenic | 50.0% | |
| CCTTCATCCAAAGGAGGTGA+CGG | + | chr7_3:72071090-72071109 | None:intergenic | 50.0% | |
| CGTCACCTCCTTTGGATGAA+GGG | - | chr7_3:72071088-72071107 | Msa1121960:intron | 50.0% | |
| GTCACCTCCTTTGGATGAAG+GGG | - | chr7_3:72071089-72071108 | Msa1121960:intron | 50.0% | |
| AAAGCCCCTTCATCCAAAGG+AGG | + | chr7_3:72071096-72071115 | None:intergenic | 50.0% | |
| GCTTTCTTTGTTGCCCCAAC+TGG | - | chr7_3:72071111-72071130 | Msa1121960:intron | 50.0% | |
| ! | CTGGCTTTCTTCCGTTGTCA+CGG | + | chr7_3:72071441-72071460 | None:intergenic | 50.0% |
| AACGGAAGAAAGCCAGCTCT+TGG | - | chr7_3:72071445-72071464 | Msa1121960:CDS | 50.0% | |
| ! | CTTGTTGTCCTTGGCAGTGA+CGG | + | chr7_3:72071518-72071537 | None:intergenic | 50.0% |
| !! | GTGCTGACTCTTGTTGTCCT+TGG | + | chr7_3:72071527-72071546 | None:intergenic | 50.0% |
| TTGAGTTTAGCGGCCTTGCA+CGG | + | chr7_3:72071606-72071625 | None:intergenic | 50.0% | |
| CTCTTGAAGTCTCCGCTTAG+TGG | + | chr7_3:72071830-72071849 | None:intergenic | 50.0% | |
| CAAAGCAAGGGTCTGTCCAA+CGG | - | chr7_3:72072037-72072056 | Msa1121960:intron | 50.0% | |
| CCGGAAATCACAATCGGCAA+TGG | - | chr7_3:72072076-72072095 | Msa1121960:intron | 50.0% | |
| TTCTATGCTCTCAAGGAGGG+GGG | + | chr7_3:72072231-72072250 | None:intergenic | 50.0% | |
| CAGGGTCACTTGATCAGTGG+AGG | - | chr7_3:72069638-72069657 | Msa1121960:CDS | 55.0% | |
| GGGTGCTAGCAAAGAGAGCA+AGG | - | chr7_3:72069885-72069904 | Msa1121960:CDS | 55.0% | |
| !! | CGGTGCTGTTTGAGTCTCTG+AGG | - | chr7_3:72070258-72070277 | Msa1121960:CDS | 55.0% |
| GGAAAGAGCTGGTCAATGCG+TGG | - | chr7_3:72070849-72070868 | Msa1121960:CDS | 55.0% | |
| TCAACAACCACACCTGTCGC+AGG | - | chr7_3:72070881-72070900 | Msa1121960:intron | 55.0% | |
| CCGTCACCTCCTTTGGATGA+AGG | - | chr7_3:72071087-72071106 | Msa1121960:intron | 55.0% | |
| TGAAACAGCCGTCACTGCCA+AGG | - | chr7_3:72071507-72071526 | Msa1121960:CDS | 55.0% | |
| AGAAAAACGAGGCTGCGGTG+AGG | - | chr7_3:72071551-72071570 | Msa1121960:CDS | 55.0% | |
| AGGCATCTTCGGCTCCACAT+TGG | + | chr7_3:72071644-72071663 | None:intergenic | 55.0% | |
| CGTTGGACAGACCCTTGCTT+TGG | + | chr7_3:72072039-72072058 | None:intergenic | 55.0% | |
| CACAATCGGCAATGGGGCAA+CGG | - | chr7_3:72072084-72072103 | Msa1121960:intron | 55.0% | |
| GGCAACGGTCGAAGATAGAG+CGG | - | chr7_3:72072099-72072118 | Msa1121960:intron | 55.0% | |
| GCTGGTCAATGCGTGGGTGA+AGG | - | chr7_3:72070856-72070875 | Msa1121960:CDS | 60.0% | |
| AGGACTCCCGTCACCTCCTT+TGG | - | chr7_3:72071080-72071099 | Msa1121960:intron | 60.0% | |
| CGGCCAGTATCAGCAGCCAT+TGG | + | chr7_3:72071586-72071605 | None:intergenic | 60.0% | |
| CTGCTGATACTGGCCGTGCA+AGG | - | chr7_3:72071590-72071609 | Msa1121960:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 72068649 | 72072668 | 72068649 | ID=Msa1121960;Name=Msa1121960 |
| chr7_3 | mRNA | 72068649 | 72072668 | 72068649 | ID=Msa1121960-mRNA-1;Parent=Msa1121960;Name=Msa1121960-mRNA-1;_AED=0.16;_eAED=0.16;_QI=448|1|1|1|0.88|0.8|10|552|443 |
| chr7_3 | exon | 72068649 | 72069325 | 72068649 | ID=Msa1121960-mRNA-1:exon:18656;Parent=Msa1121960-mRNA-1 |
| chr7_3 | exon | 72069446 | 72069527 | 72069446 | ID=Msa1121960-mRNA-1:exon:18655;Parent=Msa1121960-mRNA-1 |
| chr7_3 | exon | 72069600 | 72069910 | 72069600 | ID=Msa1121960-mRNA-1:exon:18654;Parent=Msa1121960-mRNA-1 |
| chr7_3 | exon | 72070026 | 72070053 | 72070026 | ID=Msa1121960-mRNA-1:exon:18653;Parent=Msa1121960-mRNA-1 |
| chr7_3 | exon | 72070165 | 72070301 | 72070165 | ID=Msa1121960-mRNA-1:exon:18652;Parent=Msa1121960-mRNA-1 |
| chr7_3 | exon | 72070415 | 72070473 | 72070415 | ID=Msa1121960-mRNA-1:exon:18651;Parent=Msa1121960-mRNA-1 |
| chr7_3 | exon | 72070811 | 72070893 | 72070811 | ID=Msa1121960-mRNA-1:exon:18650;Parent=Msa1121960-mRNA-1 |
| chr7_3 | exon | 72070998 | 72071066 | 72070998 | ID=Msa1121960-mRNA-1:exon:18649;Parent=Msa1121960-mRNA-1 |
| chr7_3 | exon | 72071249 | 72071839 | 72071249 | ID=Msa1121960-mRNA-1:exon:18648;Parent=Msa1121960-mRNA-1 |
| chr7_3 | exon | 72072374 | 72072668 | 72072374 | ID=Msa1121960-mRNA-1:exon:18647;Parent=Msa1121960-mRNA-1 |
| chr7_3 | five_prime_UTR | 72072374 | 72072668 | 72072374 | ID=Msa1121960-mRNA-1:five_prime_utr;Parent=Msa1121960-mRNA-1 |
| chr7_3 | five_prime_UTR | 72071687 | 72071839 | 72071687 | ID=Msa1121960-mRNA-1:five_prime_utr;Parent=Msa1121960-mRNA-1 |
| chr7_3 | CDS | 72071249 | 72071686 | 72071249 | ID=Msa1121960-mRNA-1:cds;Parent=Msa1121960-mRNA-1 |
| chr7_3 | CDS | 72070998 | 72071066 | 72070998 | ID=Msa1121960-mRNA-1:cds;Parent=Msa1121960-mRNA-1 |
| chr7_3 | CDS | 72070811 | 72070893 | 72070811 | ID=Msa1121960-mRNA-1:cds;Parent=Msa1121960-mRNA-1 |
| chr7_3 | CDS | 72070415 | 72070473 | 72070415 | ID=Msa1121960-mRNA-1:cds;Parent=Msa1121960-mRNA-1 |
| chr7_3 | CDS | 72070165 | 72070301 | 72070165 | ID=Msa1121960-mRNA-1:cds;Parent=Msa1121960-mRNA-1 |
| chr7_3 | CDS | 72070026 | 72070053 | 72070026 | ID=Msa1121960-mRNA-1:cds;Parent=Msa1121960-mRNA-1 |
| chr7_3 | CDS | 72069600 | 72069910 | 72069600 | ID=Msa1121960-mRNA-1:cds;Parent=Msa1121960-mRNA-1 |
| chr7_3 | CDS | 72069446 | 72069527 | 72069446 | ID=Msa1121960-mRNA-1:cds;Parent=Msa1121960-mRNA-1 |
| chr7_3 | CDS | 72069201 | 72069325 | 72069201 | ID=Msa1121960-mRNA-1:cds;Parent=Msa1121960-mRNA-1 |
| chr7_3 | three_prime_UTR | 72068649 | 72069200 | 72068649 | ID=Msa1121960-mRNA-1:three_prime_utr;Parent=Msa1121960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
