Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1123760 | XP_024626574.1 | 62.145 | 317 | 49 | 6 | 1 | 303 | 1 | 260 | 3.06e-116 | 348 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1123760 | A0A072TYR1 | 62.222 | 315 | 53 | 6 | 1 | 301 | 1 | 263 | 4.41e-114 | 349 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1123760 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1123760 | MtrunA17_Chr2g0287651 | 63.095 | 168 | 49 | 2 | 154 | 308 | 58 | 225 | 2.61e-68 | 230 |
| Msa1123760 | MtrunA17_Chr2g0287651 | 60.000 | 65 | 26 | 0 | 308 | 372 | 494 | 558 | 3.53e-18 | 86.3 |
| Msa1123760 | MtrunA17_Chr1g0203051 | 33.628 | 226 | 127 | 6 | 106 | 308 | 4 | 229 | 9.27e-26 | 108 |
| Msa1123760 | MtrunA17_Chr8g0389811 | 38.655 | 119 | 65 | 3 | 139 | 249 | 48 | 166 | 3.92e-16 | 76.6 |
| Msa1123760 | MtrunA17_Chr1g0171741 | 28.188 | 149 | 89 | 4 | 153 | 288 | 119 | 262 | 2.46e-13 | 69.3 |
| Msa1123760 | MtrunA17_Chr6g0473421 | 42.500 | 80 | 42 | 1 | 167 | 242 | 51 | 130 | 1.25e-12 | 65.1 |
| Msa1123760 | MtrunA17_Chr6g0479721 | 50.467 | 107 | 46 | 3 | 1 | 106 | 1 | 101 | 4.19e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 75 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATGCCTTTACTGATTT+TGG | 0.059598 | 7_3:-74755785 | Msa1123760:CDS |
| AATAAGAACTTGTCATATAA+TGG | 0.247315 | 7_3:-74754838 | Msa1123760:CDS |
| TGCATTTACACCCTGTTTAT+CGG | 0.264525 | 7_3:-74754911 | Msa1123760:CDS |
| TGTTCACTACAGACCCAAAA+AGG | 0.266221 | 7_3:-74754997 | Msa1123760:CDS |
| CATTAACTGCCGAAGGAATA+AGG | 0.291143 | 7_3:-74755253 | Msa1123760:CDS |
| AGTGATGATGGTGGTTGTTC+TGG | 0.317361 | 7_3:-74755563 | Msa1123760:CDS |
| TGCCGAAGGAATAAGGAAAA+TGG | 0.328585 | 7_3:-74755246 | Msa1123760:CDS |
| CTGTTAGGAAGAGTGATATT+AGG | 0.340554 | 7_3:-74755160 | Msa1123760:CDS |
| CATTGGTTGGAGTAGGTTCA+TGG | 0.364482 | 7_3:+74754937 | None:intergenic |
| ATAAGAACTTGTCATATAAT+GGG | 0.403187 | 7_3:-74754837 | Msa1123760:CDS |
| GGTACACCGGAACATGATTA+CGG | 0.407134 | 7_3:-74755764 | Msa1123760:CDS |
| AGCATTTATCAAGGTTAGAT+AGG | 0.409294 | 7_3:-74755070 | Msa1123760:CDS |
| GATTATAGTGCTGGTGATAA+AGG | 0.421954 | 7_3:-74755539 | Msa1123760:CDS |
| TATAAGTACGGTAAGTGTAA+TGG | 0.430620 | 7_3:-74755188 | Msa1123760:CDS |
| CGAGGCTGCTGAAATCTATA+CGG | 0.448201 | 7_3:-74753916 | Msa1123760:CDS |
| GATATTAGGCGCAATGTTAA+CGG | 0.449906 | 7_3:-74755146 | Msa1123760:CDS |
| GGGATACATGGTGGCTCAGA+AGG | 0.464555 | 7_3:-74754817 | Msa1123760:CDS |
| TAGTGAACACGGAGCCTAGC+TGG | 0.466097 | 7_3:+74755011 | None:intergenic |
| GAAACATATCCGATCATTGT+TGG | 0.469215 | 7_3:-74755716 | Msa1123760:CDS |
| GAGATAAGAAGCATTTATCA+AGG | 0.475640 | 7_3:-74755079 | Msa1123760:CDS |
| GTAGATAAAGCACAGATTGA+TGG | 0.478198 | 7_3:-74754876 | Msa1123760:CDS |
| TGATTACGGTTCTACGGATG+TGG | 0.481654 | 7_3:-74755750 | Msa1123760:CDS |
| CAGCACAGGGGATGAAAACC+TGG | 0.488423 | 7_3:+74753965 | None:intergenic |
| TGTTCTGGTGATTATAGTGC+TGG | 0.489646 | 7_3:-74755548 | Msa1123760:CDS |
| CGCAGATGAGTTGTCAGCAC+AGG | 0.491267 | 7_3:+74753951 | None:intergenic |
| AAACATATCCGATCATTGTT+GGG | 0.491804 | 7_3:-74755715 | Msa1123760:CDS |
| GTAGAACCGTAATCATGTTC+CGG | 0.492886 | 7_3:+74755758 | None:intergenic |
| AAAGATGATGATGTAGTTGT+TGG | 0.496825 | 7_3:-74755299 | Msa1123760:CDS |
| GCAGTATGTATGCAACAAGC+AGG | 0.502107 | 7_3:-74755108 | Msa1123760:intron |
| TGTAGTTGTTGGTGAGGAAA+TGG | 0.504666 | 7_3:-74755288 | Msa1123760:CDS |
| GTGAAAGAAGAGATTATGAA+AGG | 0.507624 | 7_3:-74753876 | Msa1123760:CDS |
| GCTCAGAAGGGTGGATATCC+CGG | 0.515458 | 7_3:-74754804 | Msa1123760:CDS |
| CCGATCATTGTTGGGAGTGG+TGG | 0.525336 | 7_3:-74755707 | Msa1123760:CDS |
| CGGTGTACCAAAATCAGTAA+AGG | 0.530148 | 7_3:+74755778 | None:intergenic |
| CCACCACTCCCAACAATGAT+CGG | 0.545431 | 7_3:+74755707 | None:intergenic |
| GGAACATGATTACGGTTCTA+CGG | 0.552732 | 7_3:-74755756 | Msa1123760:CDS |
| TTGTCATATAATGGGATACA+TGG | 0.555297 | 7_3:-74754829 | Msa1123760:CDS |
| TGTAAATGCACAGCATTGGT+TGG | 0.565762 | 7_3:+74754924 | None:intergenic |
| TTGTTGGTGAGGAAATGGTA+AGG | 0.572827 | 7_3:-74755283 | Msa1123760:CDS |
| TACATGGTGGCTCAGAAGGG+TGG | 0.573659 | 7_3:-74754813 | Msa1123760:CDS |
| TATCCGATCATTGTTGGGAG+TGG | 0.573961 | 7_3:-74755710 | Msa1123760:CDS |
| GCAGATGAGTTGTCAGCACA+GGG | 0.575960 | 7_3:+74753952 | None:intergenic |
| GATGAAAGTGAAGGTGATGA+AGG | 0.577534 | 7_3:-74755449 | Msa1123760:CDS |
| AGGGTGTAAATGCACAGCAT+TGG | 0.584309 | 7_3:+74754920 | None:intergenic |
| CAGTATGTATGCAACAAGCA+GGG | 0.584535 | 7_3:-74755107 | Msa1123760:CDS |
| GATGAAGGTGAACGTGATGA+AGG | 0.589312 | 7_3:-74755434 | Msa1123760:CDS |
| GGTGATAAAGGTGAAGATGA+TGG | 0.589452 | 7_3:-74755527 | Msa1123760:CDS |
| GAAGGTGAACGTGATGAAGG+TGG | 0.592672 | 7_3:-74755431 | Msa1123760:CDS |
| ATAAATTCATTAACTGCCGA+AGG | 0.597779 | 7_3:-74755260 | Msa1123760:CDS |
| AGTGAAGGACATGGTAGTGA+AGG | 0.609922 | 7_3:-74755338 | Msa1123760:CDS |
| AGAGACAATGAAAGTGATGA+TGG | 0.611273 | 7_3:-74755575 | Msa1123760:CDS |
| GGATACATGGTGGCTCAGAA+GGG | 0.612576 | 7_3:-74754816 | Msa1123760:CDS |
| AATCTGTGCTTTATCTACCT+CGG | 0.613894 | 7_3:+74754881 | None:intergenic |
| TCTGCGTTGTCTTGAACGCG+AGG | 0.617404 | 7_3:-74753934 | Msa1123760:CDS |
| GATGAAAGTCAAGGTGATGA+AGG | 0.618015 | 7_3:-74755494 | Msa1123760:CDS |
| GGTGAACGTGATGAAGTTGA+AGG | 0.625202 | 7_3:-74755473 | Msa1123760:CDS |
| AGTATGTATGCAACAAGCAG+GGG | 0.634341 | 7_3:-74755106 | Msa1123760:CDS |
| TGCACAGCATTGGTTGGAGT+AGG | 0.638605 | 7_3:+74754930 | None:intergenic |
| CTCGTACAAAGTGTCCAGCT+AGG | 0.644688 | 7_3:-74755025 | Msa1123760:CDS |
| GGTGAACGTGATGAAGGTGG+AGG | 0.647603 | 7_3:-74755428 | Msa1123760:CDS |
| TGATGATGTAGTTGTTGGTG+AGG | 0.665725 | 7_3:-74755294 | Msa1123760:CDS |
| TCATATAATGGGATACATGG+TGG | 0.669224 | 7_3:-74754826 | Msa1123760:CDS |
| GATGATGATGATGTGAGTCA+TGG | 0.683220 | 7_3:-74755653 | Msa1123760:intron |
| AGGTGTTGCACTGAGTGTGA+AGG | 0.686205 | 7_3:-74753856 | Msa1123760:CDS |
| GGTGGAGGTGATGAAAGTGA+AGG | 0.700815 | 7_3:-74755413 | Msa1123760:CDS |
| GACAATGAAAGTGATGATGG+TGG | 0.702934 | 7_3:-74755572 | Msa1123760:CDS |
| TGTTTATCGGAAAATATCCG+AGG | 0.704996 | 7_3:-74754898 | Msa1123760:CDS |
| ATTGATGGTCTTCAGTCACA+CGG | 0.708259 | 7_3:-74754861 | Msa1123760:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.708789 | 7_3:-74755353 | Msa1123760:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.717258 | 7_3:-74755398 | Msa1123760:intron |
| GTTGAAGGTGATGAAAGTGA+AGG | 0.720547 | 7_3:-74755458 | Msa1123760:CDS |
| GGTGATGAAAGTGAAGGACA+TGG | 0.730526 | 7_3:-74755347 | Msa1123760:CDS |
| AGTGAAGGTGATGAAAGTGA+AGG | 0.731903 | 7_3:-74755368 | Msa1123760:intron |
| AGTGAATGCGATGAAAGTCA+AGG | 0.740679 | 7_3:-74755503 | Msa1123760:CDS |
| CAGATGAGTTGTCAGCACAG+GGG | 0.773409 | 7_3:+74753953 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACGATTTTTATTATAAGTA+CGG | - | chr7_3:74754445-74754464 | Msa1123760:intron | 15.0% |
| !!! | TACGATTTTTATTATAAGTA+CGG | - | chr7_3:74754445-74754464 | Msa1123760:intron | 15.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | - | chr7_3:74754807-74754826 | Msa1123760:CDS | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | - | chr7_3:74754808-74754827 | Msa1123760:CDS | 20.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | - | chr7_3:74754807-74754826 | Msa1123760:CDS | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | - | chr7_3:74754808-74754827 | Msa1123760:CDS | 20.0% |
| ! | AATTATACGAAGAATACTCA+AGG | - | chr7_3:74754016-74754035 | Msa1123760:intron | 25.0% |
| ! | ATTATACGAAGAATACTCAA+GGG | - | chr7_3:74754017-74754036 | Msa1123760:intron | 25.0% |
| !! | AAAAATGTGTGCTGTTATTA+AGG | - | chr7_3:74754906-74754925 | Msa1123760:CDS | 25.0% |
| ! | CTTAACATTCAGATAGTTTA+GGG | + | chr7_3:74754950-74754969 | None:intergenic | 25.0% |
| ! | ACTTAACATTCAGATAGTTT+AGG | + | chr7_3:74754951-74754970 | None:intergenic | 25.0% |
| !!! | AACGTTTGAAATGTCTATTT+TGG | - | chr7_3:74755019-74755038 | Msa1123760:CDS | 25.0% |
| !!! | ACGTTTGAAATGTCTATTTT+GGG | - | chr7_3:74755020-74755039 | Msa1123760:CDS | 25.0% |
| ! | AAACAATAGACACTTATATG+TGG | - | chr7_3:74755202-74755221 | Msa1123760:CDS | 25.0% |
| ! | AACAATAGACACTTATATGT+GGG | - | chr7_3:74755203-74755222 | Msa1123760:CDS | 25.0% |
| !! | AGCAATGTACTCTAATTTTA+CGG | - | chr7_3:74755416-74755435 | Msa1123760:CDS | 25.0% |
| !! | TTCTTTGTTCTCATATGTTT+TGG | + | chr7_3:74755511-74755530 | None:intergenic | 25.0% |
| ! | ATATGAGAACAAAGAATTGT+GGG | - | chr7_3:74755515-74755534 | Msa1123760:CDS | 25.0% |
| ! | AATTATACGAAGAATACTCA+AGG | - | chr7_3:74754016-74754035 | Msa1123760:intron | 25.0% |
| ! | ATTATACGAAGAATACTCAA+GGG | - | chr7_3:74754017-74754036 | Msa1123760:intron | 25.0% |
| !! | AAAAATGTGTGCTGTTATTA+AGG | - | chr7_3:74754906-74754925 | Msa1123760:CDS | 25.0% |
| ! | CTTAACATTCAGATAGTTTA+GGG | + | chr7_3:74754950-74754969 | None:intergenic | 25.0% |
| ! | ACTTAACATTCAGATAGTTT+AGG | + | chr7_3:74754951-74754970 | None:intergenic | 25.0% |
| !!! | AACGTTTGAAATGTCTATTT+TGG | - | chr7_3:74755019-74755038 | Msa1123760:CDS | 25.0% |
| !!! | ACGTTTGAAATGTCTATTTT+GGG | - | chr7_3:74755020-74755039 | Msa1123760:CDS | 25.0% |
| ! | AAACAATAGACACTTATATG+TGG | - | chr7_3:74755202-74755221 | Msa1123760:CDS | 25.0% |
| ! | AACAATAGACACTTATATGT+GGG | - | chr7_3:74755203-74755222 | Msa1123760:CDS | 25.0% |
| !! | AGCAATGTACTCTAATTTTA+CGG | - | chr7_3:74755416-74755435 | Msa1123760:CDS | 25.0% |
| !! | TTCTTTGTTCTCATATGTTT+TGG | + | chr7_3:74755511-74755530 | None:intergenic | 25.0% |
| ! | ATATGAGAACAAAGAATTGT+GGG | - | chr7_3:74755515-74755534 | Msa1123760:CDS | 25.0% |
| !!! | AACAATGCCTTTACTGATTT+TGG | - | chr7_3:74753860-74753879 | Msa1123760:CDS | 30.0% |
| AAACATATCCGATCATTGTT+GGG | - | chr7_3:74753930-74753949 | Msa1123760:CDS | 30.0% | |
| ! | AAAGATGATGATGTAGTTGT+TGG | - | chr7_3:74754346-74754365 | Msa1123760:intron | 30.0% |
| ATAAATTCATTAACTGCCGA+AGG | - | chr7_3:74754385-74754404 | Msa1123760:intron | 30.0% | |
| ! | TTCCATTTTCCTTATTCCTT+CGG | + | chr7_3:74754404-74754423 | None:intergenic | 30.0% |
| TATAAGTACGGTAAGTGTAA+TGG | - | chr7_3:74754457-74754476 | Msa1123760:intron | 30.0% | |
| !! | GAGATAAGAAGCATTTATCA+AGG | - | chr7_3:74754566-74754585 | Msa1123760:intron | 30.0% |
| AGCATTTATCAAGGTTAGAT+AGG | - | chr7_3:74754575-74754594 | Msa1123760:intron | 30.0% | |
| ! | ACAACATATCTACCCTTTTT+GGG | + | chr7_3:74754664-74754683 | None:intergenic | 30.0% |
| !!! | TGTTGTGTCTATTTTTGAAG+AGG | - | chr7_3:74754678-74754697 | Msa1123760:intron | 30.0% |
| !!! | GTTGTGTCTATTTTTGAAGA+GGG | - | chr7_3:74754679-74754698 | Msa1123760:intron | 30.0% |
| ! | TTGTCATATAATGGGATACA+TGG | - | chr7_3:74754816-74754835 | Msa1123760:CDS | 30.0% |
| GAATATTCACAAAAGGAATG+TGG | + | chr7_3:74754985-74755004 | None:intergenic | 30.0% | |
| !! | AGATCAGATTATTTCTGCTT+TGG | - | chr7_3:74755057-74755076 | Msa1123760:CDS | 30.0% |
| CAAATATAACTGTTTGTGAG+TGG | + | chr7_3:74755161-74755180 | None:intergenic | 30.0% | |
| CACTCACAAACAGTTATATT+TGG | - | chr7_3:74755159-74755178 | Msa1123760:CDS | 30.0% | |
| ! | ACCAGTTTTCTAGATTGTAT+GGG | - | chr7_3:74755231-74755250 | Msa1123760:CDS | 30.0% |
| !!! | TGTCAAGAATTCAGCTTTTT+TGG | - | chr7_3:74755380-74755399 | Msa1123760:intron | 30.0% |
| !!! | AAGAATTCAGCTTTTTTGGA+AGG | - | chr7_3:74755384-74755403 | Msa1123760:intron | 30.0% |
| ! | AATGTACTCTAATTTTACGG+AGG | - | chr7_3:74755419-74755438 | Msa1123760:CDS | 30.0% |
| ! | AGGATGAATTTGAAGAGTTT+TGG | - | chr7_3:74755439-74755458 | Msa1123760:CDS | 30.0% |
| ! | GGATGAATTTGAAGAGTTTT+GGG | - | chr7_3:74755440-74755459 | Msa1123760:CDS | 30.0% |
| ! | GATGAATTTGAAGAGTTTTG+GGG | - | chr7_3:74755441-74755460 | Msa1123760:CDS | 30.0% |
| !! | ATGAATTTGAAGAGTTTTGG+GGG | - | chr7_3:74755442-74755461 | Msa1123760:CDS | 30.0% |
| CATATGAGAACAAAGAATTG+TGG | - | chr7_3:74755514-74755533 | Msa1123760:CDS | 30.0% | |
| !! | TTGTAGCTGATTTTAAATCC+AGG | - | chr7_3:74755662-74755681 | Msa1123760:CDS | 30.0% |
| GTGAAAGAAGAGATTATGAA+AGG | - | chr7_3:74755769-74755788 | Msa1123760:CDS | 30.0% | |
| !!! | AACAATGCCTTTACTGATTT+TGG | - | chr7_3:74753860-74753879 | Msa1123760:CDS | 30.0% |
| AAACATATCCGATCATTGTT+GGG | - | chr7_3:74753930-74753949 | Msa1123760:CDS | 30.0% | |
| ! | AAAGATGATGATGTAGTTGT+TGG | - | chr7_3:74754346-74754365 | Msa1123760:intron | 30.0% |
| ATAAATTCATTAACTGCCGA+AGG | - | chr7_3:74754385-74754404 | Msa1123760:intron | 30.0% | |
| ! | TTCCATTTTCCTTATTCCTT+CGG | + | chr7_3:74754404-74754423 | None:intergenic | 30.0% |
| TATAAGTACGGTAAGTGTAA+TGG | - | chr7_3:74754457-74754476 | Msa1123760:intron | 30.0% | |
| !! | GAGATAAGAAGCATTTATCA+AGG | - | chr7_3:74754566-74754585 | Msa1123760:intron | 30.0% |
| AGCATTTATCAAGGTTAGAT+AGG | - | chr7_3:74754575-74754594 | Msa1123760:intron | 30.0% | |
| ! | ACAACATATCTACCCTTTTT+GGG | + | chr7_3:74754664-74754683 | None:intergenic | 30.0% |
| !!! | TGTTGTGTCTATTTTTGAAG+AGG | - | chr7_3:74754678-74754697 | Msa1123760:intron | 30.0% |
| !!! | GTTGTGTCTATTTTTGAAGA+GGG | - | chr7_3:74754679-74754698 | Msa1123760:intron | 30.0% |
| ! | TTGTCATATAATGGGATACA+TGG | - | chr7_3:74754816-74754835 | Msa1123760:CDS | 30.0% |
| GAATATTCACAAAAGGAATG+TGG | + | chr7_3:74754985-74755004 | None:intergenic | 30.0% | |
| !! | AGATCAGATTATTTCTGCTT+TGG | - | chr7_3:74755057-74755076 | Msa1123760:CDS | 30.0% |
| CAAATATAACTGTTTGTGAG+TGG | + | chr7_3:74755161-74755180 | None:intergenic | 30.0% | |
| CACTCACAAACAGTTATATT+TGG | - | chr7_3:74755159-74755178 | Msa1123760:CDS | 30.0% | |
| ! | ACCAGTTTTCTAGATTGTAT+GGG | - | chr7_3:74755231-74755250 | Msa1123760:CDS | 30.0% |
| !!! | TGTCAAGAATTCAGCTTTTT+TGG | - | chr7_3:74755380-74755399 | Msa1123760:intron | 30.0% |
| !!! | AAGAATTCAGCTTTTTTGGA+AGG | - | chr7_3:74755384-74755403 | Msa1123760:intron | 30.0% |
| ! | AATGTACTCTAATTTTACGG+AGG | - | chr7_3:74755419-74755438 | Msa1123760:CDS | 30.0% |
| ! | AGGATGAATTTGAAGAGTTT+TGG | - | chr7_3:74755439-74755458 | Msa1123760:CDS | 30.0% |
| ! | GGATGAATTTGAAGAGTTTT+GGG | - | chr7_3:74755440-74755459 | Msa1123760:CDS | 30.0% |
| ! | GATGAATTTGAAGAGTTTTG+GGG | - | chr7_3:74755441-74755460 | Msa1123760:CDS | 30.0% |
| !! | ATGAATTTGAAGAGTTTTGG+GGG | - | chr7_3:74755442-74755461 | Msa1123760:CDS | 30.0% |
| CATATGAGAACAAAGAATTG+TGG | - | chr7_3:74755514-74755533 | Msa1123760:CDS | 30.0% | |
| !! | TTGTAGCTGATTTTAAATCC+AGG | - | chr7_3:74755662-74755681 | Msa1123760:CDS | 30.0% |
| GTGAAAGAAGAGATTATGAA+AGG | - | chr7_3:74755769-74755788 | Msa1123760:CDS | 30.0% | |
| !!! | CTTTACTGATTTTGGTACAC+CGG | - | chr7_3:74753868-74753887 | Msa1123760:CDS | 35.0% |
| GAAACATATCCGATCATTGT+TGG | - | chr7_3:74753929-74753948 | Msa1123760:CDS | 35.0% | |
| AAGAATACTCAAGGGAATAC+AGG | - | chr7_3:74754025-74754044 | Msa1123760:intron | 35.0% | |
| AGAGACAATGAAAGTGATGA+TGG | - | chr7_3:74754070-74754089 | Msa1123760:intron | 35.0% | |
| !! | GATTATAGTGCTGGTGATAA+AGG | - | chr7_3:74754106-74754125 | Msa1123760:intron | 35.0% |
| !!! | AGTGTAATGGTTTTGCTGTT+AGG | - | chr7_3:74754470-74754489 | Msa1123760:intron | 35.0% |
| CTGTTAGGAAGAGTGATATT+AGG | - | chr7_3:74754485-74754504 | Msa1123760:intron | 35.0% | |
| GATATTAGGCGCAATGTTAA+CGG | - | chr7_3:74754499-74754518 | Msa1123760:intron | 35.0% | |
| TTAACGGTGAGATTGTAATG+AGG | - | chr7_3:74754515-74754534 | Msa1123760:intron | 35.0% | |
| ! | CACAACATATCTACCCTTTT+TGG | + | chr7_3:74754665-74754684 | None:intergenic | 35.0% |
| TGCATTTACACCCTGTTTAT+CGG | - | chr7_3:74754734-74754753 | Msa1123760:intron | 35.0% | |
| ! | CGGATATTTTCCGATAAACA+GGG | + | chr7_3:74754747-74754766 | None:intergenic | 35.0% |
| ! | TCGGATATTTTCCGATAAAC+AGG | + | chr7_3:74754748-74754767 | None:intergenic | 35.0% |
| TGTTTATCGGAAAATATCCG+AGG | - | chr7_3:74754747-74754766 | Msa1123760:intron | 35.0% | |
| AATCTGTGCTTTATCTACCT+CGG | + | chr7_3:74754767-74754786 | None:intergenic | 35.0% | |
| GTAGATAAAGCACAGATTGA+TGG | - | chr7_3:74754769-74754788 | Msa1123760:intron | 35.0% | |
| ! | TCATATAATGGGATACATGG+TGG | - | chr7_3:74754819-74754838 | Msa1123760:CDS | 35.0% |
| ! | ATGTGTGCTGTTATTAAGGA+TGG | - | chr7_3:74754910-74754929 | Msa1123760:CDS | 35.0% |
| AGTGGCAGAATATTCACAAA+AGG | + | chr7_3:74754992-74755011 | None:intergenic | 35.0% | |
| !! | AAATGTCTATTTTGGGCAGA+TGG | - | chr7_3:74755027-74755046 | Msa1123760:CDS | 35.0% |
| !! | AGTTATATTTGGTGCTGCAT+TGG | - | chr7_3:74755170-74755189 | Msa1123760:CDS | 35.0% |
| ! | GACCAGTTTTCTAGATTGTA+TGG | - | chr7_3:74755230-74755249 | Msa1123760:CDS | 35.0% |
| TCCCATACAATCTAGAAAAC+TGG | + | chr7_3:74755235-74755254 | None:intergenic | 35.0% | |
| !!! | TGAATTTGAAGAGTTTTGGG+GGG | - | chr7_3:74755443-74755462 | Msa1123760:CDS | 35.0% |
| ATGGAATTGAGAACAATCCA+TGG | - | chr7_3:74755481-74755500 | Msa1123760:CDS | 35.0% | |
| TGGAATTGAGAACAATCCAT+GGG | - | chr7_3:74755482-74755501 | Msa1123760:CDS | 35.0% | |
| !!! | TCATATGTTTTGGTAACCCA+TGG | + | chr7_3:74755501-74755520 | None:intergenic | 35.0% |
| !! | ATTTCTGCACAATTTTGACG+AGG | - | chr7_3:74755612-74755631 | Msa1123760:intron | 35.0% |
| !!! | CTTTACTGATTTTGGTACAC+CGG | - | chr7_3:74753868-74753887 | Msa1123760:CDS | 35.0% |
| GAAACATATCCGATCATTGT+TGG | - | chr7_3:74753929-74753948 | Msa1123760:CDS | 35.0% | |
| AAGAATACTCAAGGGAATAC+AGG | - | chr7_3:74754025-74754044 | Msa1123760:intron | 35.0% | |
| AGAGACAATGAAAGTGATGA+TGG | - | chr7_3:74754070-74754089 | Msa1123760:intron | 35.0% | |
| !! | GATTATAGTGCTGGTGATAA+AGG | - | chr7_3:74754106-74754125 | Msa1123760:intron | 35.0% |
| !!! | AGTGTAATGGTTTTGCTGTT+AGG | - | chr7_3:74754470-74754489 | Msa1123760:intron | 35.0% |
| CTGTTAGGAAGAGTGATATT+AGG | - | chr7_3:74754485-74754504 | Msa1123760:intron | 35.0% | |
| GATATTAGGCGCAATGTTAA+CGG | - | chr7_3:74754499-74754518 | Msa1123760:intron | 35.0% | |
| TTAACGGTGAGATTGTAATG+AGG | - | chr7_3:74754515-74754534 | Msa1123760:intron | 35.0% | |
| ! | CACAACATATCTACCCTTTT+TGG | + | chr7_3:74754665-74754684 | None:intergenic | 35.0% |
| TGCATTTACACCCTGTTTAT+CGG | - | chr7_3:74754734-74754753 | Msa1123760:intron | 35.0% | |
| ! | CGGATATTTTCCGATAAACA+GGG | + | chr7_3:74754747-74754766 | None:intergenic | 35.0% |
| ! | TCGGATATTTTCCGATAAAC+AGG | + | chr7_3:74754748-74754767 | None:intergenic | 35.0% |
| TGTTTATCGGAAAATATCCG+AGG | - | chr7_3:74754747-74754766 | Msa1123760:intron | 35.0% | |
| AATCTGTGCTTTATCTACCT+CGG | + | chr7_3:74754767-74754786 | None:intergenic | 35.0% | |
| GTAGATAAAGCACAGATTGA+TGG | - | chr7_3:74754769-74754788 | Msa1123760:intron | 35.0% | |
| ! | TCATATAATGGGATACATGG+TGG | - | chr7_3:74754819-74754838 | Msa1123760:CDS | 35.0% |
| ! | ATGTGTGCTGTTATTAAGGA+TGG | - | chr7_3:74754910-74754929 | Msa1123760:CDS | 35.0% |
| AGTGGCAGAATATTCACAAA+AGG | + | chr7_3:74754992-74755011 | None:intergenic | 35.0% | |
| !! | AAATGTCTATTTTGGGCAGA+TGG | - | chr7_3:74755027-74755046 | Msa1123760:CDS | 35.0% |
| !! | AGTTATATTTGGTGCTGCAT+TGG | - | chr7_3:74755170-74755189 | Msa1123760:CDS | 35.0% |
| ! | GACCAGTTTTCTAGATTGTA+TGG | - | chr7_3:74755230-74755249 | Msa1123760:CDS | 35.0% |
| TCCCATACAATCTAGAAAAC+TGG | + | chr7_3:74755235-74755254 | None:intergenic | 35.0% | |
| !!! | TGAATTTGAAGAGTTTTGGG+GGG | - | chr7_3:74755443-74755462 | Msa1123760:CDS | 35.0% |
| ATGGAATTGAGAACAATCCA+TGG | - | chr7_3:74755481-74755500 | Msa1123760:CDS | 35.0% | |
| TGGAATTGAGAACAATCCAT+GGG | - | chr7_3:74755482-74755501 | Msa1123760:CDS | 35.0% | |
| !!! | TCATATGTTTTGGTAACCCA+TGG | + | chr7_3:74755501-74755520 | None:intergenic | 35.0% |
| !! | ATTTCTGCACAATTTTGACG+AGG | - | chr7_3:74755612-74755631 | Msa1123760:intron | 35.0% |
| CGGTGTACCAAAATCAGTAA+AGG | + | chr7_3:74753870-74753889 | None:intergenic | 40.0% | |
| GTAGAACCGTAATCATGTTC+CGG | + | chr7_3:74753890-74753909 | None:intergenic | 40.0% | |
| GGAACATGATTACGGTTCTA+CGG | - | chr7_3:74753889-74753908 | Msa1123760:CDS | 40.0% | |
| ! | GATGATGATGATGTGAGTCA+TGG | - | chr7_3:74753992-74754011 | Msa1123760:CDS | 40.0% |
| !! | GACAATGAAAGTGATGATGG+TGG | - | chr7_3:74754073-74754092 | Msa1123760:intron | 40.0% |
| TGTTCTGGTGATTATAGTGC+TGG | - | chr7_3:74754097-74754116 | Msa1123760:intron | 40.0% | |
| GGTGATAAAGGTGAAGATGA+TGG | - | chr7_3:74754118-74754137 | Msa1123760:intron | 40.0% | |
| AGTGAATGCGATGAAAGTCA+AGG | - | chr7_3:74754142-74754161 | Msa1123760:intron | 40.0% | |
| GATGAAAGTCAAGGTGATGA+AGG | - | chr7_3:74754151-74754170 | Msa1123760:intron | 40.0% | |
| GTTGAAGGTGATGAAAGTGA+AGG | - | chr7_3:74754187-74754206 | Msa1123760:intron | 40.0% | |
| GATGAAAGTGAAGGTGATGA+AGG | - | chr7_3:74754196-74754215 | Msa1123760:intron | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr7_3:74754247-74754266 | Msa1123760:intron | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr7_3:74754247-74754266 | Msa1123760:intron | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr7_3:74754247-74754266 | Msa1123760:intron | 40.0% | |
| ! | TGATGATGTAGTTGTTGGTG+AGG | - | chr7_3:74754351-74754370 | Msa1123760:intron | 40.0% |
| ! | TGTAGTTGTTGGTGAGGAAA+TGG | - | chr7_3:74754357-74754376 | Msa1123760:intron | 40.0% |
| ! | TTGTTGGTGAGGAAATGGTA+AGG | - | chr7_3:74754362-74754381 | Msa1123760:intron | 40.0% |
| CATTAACTGCCGAAGGAATA+AGG | - | chr7_3:74754392-74754411 | Msa1123760:intron | 40.0% | |
| TGCCGAAGGAATAAGGAAAA+TGG | - | chr7_3:74754399-74754418 | Msa1123760:intron | 40.0% | |
| CAGTATGTATGCAACAAGCA+GGG | - | chr7_3:74754538-74754557 | Msa1123760:intron | 40.0% | |
| AGTATGTATGCAACAAGCAG+GGG | - | chr7_3:74754539-74754558 | Msa1123760:intron | 40.0% | |
| !! | TTTTGGGTCTGTAGTGAACA+CGG | + | chr7_3:74754648-74754667 | None:intergenic | 40.0% |
| TGTTCACTACAGACCCAAAA+AGG | - | chr7_3:74754648-74754667 | Msa1123760:intron | 40.0% | |
| GTTCACTACAGACCCAAAAA+GGG | - | chr7_3:74754649-74754668 | Msa1123760:intron | 40.0% | |
| !! | TGTAAATGCACAGCATTGGT+TGG | + | chr7_3:74754724-74754743 | None:intergenic | 40.0% |
| ! | ATTGATGGTCTTCAGTCACA+CGG | - | chr7_3:74754784-74754803 | Msa1123760:intron | 40.0% |
| TTTCTTAGTGAACCCAACAC+CGG | + | chr7_3:74754863-74754882 | None:intergenic | 40.0% | |
| AAAGGAATGTGGATCAGTTG+AGG | + | chr7_3:74754974-74754993 | None:intergenic | 40.0% | |
| TTTCAAACGTTCGTCATCAG+TGG | + | chr7_3:74755010-74755029 | None:intergenic | 40.0% | |
| !! | TTATTTCTGCTTTGGCGATG+TGG | - | chr7_3:74755065-74755084 | Msa1123760:CDS | 40.0% |
| GAACAAATACCACTATCCGT+TGG | - | chr7_3:74755113-74755132 | Msa1123760:intron | 40.0% | |
| ACAAAATCACCAACGGATAG+TGG | + | chr7_3:74755125-74755144 | None:intergenic | 40.0% | |
| !!! | TATCCGTTGGTGATTTTGTC+TGG | - | chr7_3:74755126-74755145 | Msa1123760:intron | 40.0% |
| ! | CCATCTGTTACAACTGCTTT+TGG | + | chr7_3:74755267-74755286 | None:intergenic | 40.0% |
| CCAAAAGCAGTTGTAACAGA+TGG | - | chr7_3:74755264-74755283 | Msa1123760:CDS | 40.0% | |
| GCATCTGAACAAGAATGCTA+TGG | - | chr7_3:74755353-74755372 | Msa1123760:CDS | 40.0% | |
| !! | AATTTTGACGAGGCAATGAG+AGG | - | chr7_3:74755622-74755641 | Msa1123760:intron | 40.0% |
| CGGTGTACCAAAATCAGTAA+AGG | + | chr7_3:74753870-74753889 | None:intergenic | 40.0% | |
| GTAGAACCGTAATCATGTTC+CGG | + | chr7_3:74753890-74753909 | None:intergenic | 40.0% | |
| GGAACATGATTACGGTTCTA+CGG | - | chr7_3:74753889-74753908 | Msa1123760:CDS | 40.0% | |
| ! | GATGATGATGATGTGAGTCA+TGG | - | chr7_3:74753992-74754011 | Msa1123760:CDS | 40.0% |
| !! | GACAATGAAAGTGATGATGG+TGG | - | chr7_3:74754073-74754092 | Msa1123760:intron | 40.0% |
| TGTTCTGGTGATTATAGTGC+TGG | - | chr7_3:74754097-74754116 | Msa1123760:intron | 40.0% | |
| GGTGATAAAGGTGAAGATGA+TGG | - | chr7_3:74754118-74754137 | Msa1123760:intron | 40.0% | |
| AGTGAATGCGATGAAAGTCA+AGG | - | chr7_3:74754142-74754161 | Msa1123760:intron | 40.0% | |
| GATGAAAGTCAAGGTGATGA+AGG | - | chr7_3:74754151-74754170 | Msa1123760:intron | 40.0% | |
| GTTGAAGGTGATGAAAGTGA+AGG | - | chr7_3:74754187-74754206 | Msa1123760:intron | 40.0% | |
| GATGAAAGTGAAGGTGATGA+AGG | - | chr7_3:74754196-74754215 | Msa1123760:intron | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr7_3:74754247-74754266 | Msa1123760:intron | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr7_3:74754247-74754266 | Msa1123760:intron | 40.0% | |
| AGTGAAGGTGATGAAAGTGA+AGG | - | chr7_3:74754247-74754266 | Msa1123760:intron | 40.0% | |
| ! | TGATGATGTAGTTGTTGGTG+AGG | - | chr7_3:74754351-74754370 | Msa1123760:intron | 40.0% |
| ! | TGTAGTTGTTGGTGAGGAAA+TGG | - | chr7_3:74754357-74754376 | Msa1123760:intron | 40.0% |
| ! | TTGTTGGTGAGGAAATGGTA+AGG | - | chr7_3:74754362-74754381 | Msa1123760:intron | 40.0% |
| CATTAACTGCCGAAGGAATA+AGG | - | chr7_3:74754392-74754411 | Msa1123760:intron | 40.0% | |
| TGCCGAAGGAATAAGGAAAA+TGG | - | chr7_3:74754399-74754418 | Msa1123760:intron | 40.0% | |
| CAGTATGTATGCAACAAGCA+GGG | - | chr7_3:74754538-74754557 | Msa1123760:intron | 40.0% | |
| AGTATGTATGCAACAAGCAG+GGG | - | chr7_3:74754539-74754558 | Msa1123760:intron | 40.0% | |
| !! | TTTTGGGTCTGTAGTGAACA+CGG | + | chr7_3:74754648-74754667 | None:intergenic | 40.0% |
| TGTTCACTACAGACCCAAAA+AGG | - | chr7_3:74754648-74754667 | Msa1123760:intron | 40.0% | |
| GTTCACTACAGACCCAAAAA+GGG | - | chr7_3:74754649-74754668 | Msa1123760:intron | 40.0% | |
| !! | TGTAAATGCACAGCATTGGT+TGG | + | chr7_3:74754724-74754743 | None:intergenic | 40.0% |
| ! | ATTGATGGTCTTCAGTCACA+CGG | - | chr7_3:74754784-74754803 | Msa1123760:intron | 40.0% |
| TTTCTTAGTGAACCCAACAC+CGG | + | chr7_3:74754863-74754882 | None:intergenic | 40.0% | |
| AAAGGAATGTGGATCAGTTG+AGG | + | chr7_3:74754974-74754993 | None:intergenic | 40.0% | |
| TTTCAAACGTTCGTCATCAG+TGG | + | chr7_3:74755010-74755029 | None:intergenic | 40.0% | |
| !! | TTATTTCTGCTTTGGCGATG+TGG | - | chr7_3:74755065-74755084 | Msa1123760:CDS | 40.0% |
| GAACAAATACCACTATCCGT+TGG | - | chr7_3:74755113-74755132 | Msa1123760:intron | 40.0% | |
| ACAAAATCACCAACGGATAG+TGG | + | chr7_3:74755125-74755144 | None:intergenic | 40.0% | |
| !!! | TATCCGTTGGTGATTTTGTC+TGG | - | chr7_3:74755126-74755145 | Msa1123760:intron | 40.0% |
| ! | CCATCTGTTACAACTGCTTT+TGG | + | chr7_3:74755267-74755286 | None:intergenic | 40.0% |
| CCAAAAGCAGTTGTAACAGA+TGG | - | chr7_3:74755264-74755283 | Msa1123760:CDS | 40.0% | |
| GCATCTGAACAAGAATGCTA+TGG | - | chr7_3:74755353-74755372 | Msa1123760:CDS | 40.0% | |
| !! | AATTTTGACGAGGCAATGAG+AGG | - | chr7_3:74755622-74755641 | Msa1123760:intron | 40.0% |
| GGTACACCGGAACATGATTA+CGG | - | chr7_3:74753881-74753900 | Msa1123760:CDS | 45.0% | |
| TGATTACGGTTCTACGGATG+TGG | - | chr7_3:74753895-74753914 | Msa1123760:CDS | 45.0% | |
| TATCCGATCATTGTTGGGAG+TGG | - | chr7_3:74753935-74753954 | Msa1123760:CDS | 45.0% | |
| !! | AGTGATGATGGTGGTTGTTC+TGG | - | chr7_3:74754082-74754101 | Msa1123760:intron | 45.0% |
| GGTGAACGTGATGAAGTTGA+AGG | - | chr7_3:74754172-74754191 | Msa1123760:intron | 45.0% | |
| GATGAAGGTGAACGTGATGA+AGG | - | chr7_3:74754166-74754185 | Msa1123760:intron | 45.0% | |
| AGTGAAGGTCATGCTAGTGA+AGG | - | chr7_3:74754262-74754281 | Msa1123760:intron | 45.0% | |
| GGTGATGAAAGTGAAGGACA+TGG | - | chr7_3:74754298-74754317 | Msa1123760:intron | 45.0% | |
| ! | AGTGAAGGACATGGTAGTGA+AGG | - | chr7_3:74754307-74754326 | Msa1123760:intron | 45.0% |
| GCAGTATGTATGCAACAAGC+AGG | - | chr7_3:74754537-74754556 | Msa1123760:intron | 45.0% | |
| ! | CATTGGTTGGAGTAGGTTCA+TGG | + | chr7_3:74754711-74754730 | None:intergenic | 45.0% |
| AGGGTGTAAATGCACAGCAT+TGG | + | chr7_3:74754728-74754747 | None:intergenic | 45.0% | |
| TTCTTAGTGAACCCAACACC+GGG | + | chr7_3:74754862-74754881 | None:intergenic | 45.0% | |
| CAGCCAGACAAAATCACCAA+CGG | + | chr7_3:74755132-74755151 | None:intergenic | 45.0% | |
| !! | ATTTGGTGCTGCATTGGTGA+TGG | - | chr7_3:74755176-74755195 | Msa1123760:CDS | 45.0% |
| GCAGTTGTAACAGATGGTGA+CGG | - | chr7_3:74755270-74755289 | Msa1123760:CDS | 45.0% | |
| !! | AGATGGTGACGGTTCTATGA+GGG | - | chr7_3:74755281-74755300 | Msa1123760:CDS | 45.0% |
| TTCTATGAGGGAGGCGATAA+AGG | - | chr7_3:74755293-74755312 | Msa1123760:CDS | 45.0% | |
| TACGTGCGTGACGATTTCTT+TGG | - | chr7_3:74755546-74755565 | Msa1123760:CDS | 45.0% | |
| ACTACGTCTGCGTTGAATTG+TGG | - | chr7_3:74755579-74755598 | Msa1123760:CDS | 45.0% | |
| CTACGTCTGCGTTGAATTGT+GGG | - | chr7_3:74755580-74755599 | Msa1123760:CDS | 45.0% | |
| CGAGGCTGCTGAAATCTATA+CGG | - | chr7_3:74755729-74755748 | Msa1123760:CDS | 45.0% | |
| GGTACACCGGAACATGATTA+CGG | - | chr7_3:74753881-74753900 | Msa1123760:CDS | 45.0% | |
| TGATTACGGTTCTACGGATG+TGG | - | chr7_3:74753895-74753914 | Msa1123760:CDS | 45.0% | |
| TATCCGATCATTGTTGGGAG+TGG | - | chr7_3:74753935-74753954 | Msa1123760:CDS | 45.0% | |
| !! | AGTGATGATGGTGGTTGTTC+TGG | - | chr7_3:74754082-74754101 | Msa1123760:intron | 45.0% |
| GGTGAACGTGATGAAGTTGA+AGG | - | chr7_3:74754172-74754191 | Msa1123760:intron | 45.0% | |
| GATGAAGGTGAACGTGATGA+AGG | - | chr7_3:74754166-74754185 | Msa1123760:intron | 45.0% | |
| AGTGAAGGTCATGCTAGTGA+AGG | - | chr7_3:74754262-74754281 | Msa1123760:intron | 45.0% | |
| GGTGATGAAAGTGAAGGACA+TGG | - | chr7_3:74754298-74754317 | Msa1123760:intron | 45.0% | |
| ! | AGTGAAGGACATGGTAGTGA+AGG | - | chr7_3:74754307-74754326 | Msa1123760:intron | 45.0% |
| GCAGTATGTATGCAACAAGC+AGG | - | chr7_3:74754537-74754556 | Msa1123760:intron | 45.0% | |
| ! | CATTGGTTGGAGTAGGTTCA+TGG | + | chr7_3:74754711-74754730 | None:intergenic | 45.0% |
| AGGGTGTAAATGCACAGCAT+TGG | + | chr7_3:74754728-74754747 | None:intergenic | 45.0% | |
| TTCTTAGTGAACCCAACACC+GGG | + | chr7_3:74754862-74754881 | None:intergenic | 45.0% | |
| CAGCCAGACAAAATCACCAA+CGG | + | chr7_3:74755132-74755151 | None:intergenic | 45.0% | |
| !! | ATTTGGTGCTGCATTGGTGA+TGG | - | chr7_3:74755176-74755195 | Msa1123760:CDS | 45.0% |
| GCAGTTGTAACAGATGGTGA+CGG | - | chr7_3:74755270-74755289 | Msa1123760:CDS | 45.0% | |
| !! | AGATGGTGACGGTTCTATGA+GGG | - | chr7_3:74755281-74755300 | Msa1123760:CDS | 45.0% |
| TTCTATGAGGGAGGCGATAA+AGG | - | chr7_3:74755293-74755312 | Msa1123760:CDS | 45.0% | |
| TACGTGCGTGACGATTTCTT+TGG | - | chr7_3:74755546-74755565 | Msa1123760:CDS | 45.0% | |
| ACTACGTCTGCGTTGAATTG+TGG | - | chr7_3:74755579-74755598 | Msa1123760:CDS | 45.0% | |
| CTACGTCTGCGTTGAATTGT+GGG | - | chr7_3:74755580-74755599 | Msa1123760:CDS | 45.0% | |
| CGAGGCTGCTGAAATCTATA+CGG | - | chr7_3:74755729-74755748 | Msa1123760:CDS | 45.0% | |
| CCACCACTCCCAACAATGAT+CGG | + | chr7_3:74753941-74753960 | None:intergenic | 50.0% | |
| GAAGGTGAACGTGATGAAGG+TGG | - | chr7_3:74754214-74754233 | Msa1123760:intron | 50.0% | |
| GGTGGAGGTGATGAAAGTGA+AGG | - | chr7_3:74754232-74754251 | Msa1123760:intron | 50.0% | |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | - | chr7_3:74754620-74754639 | Msa1123760:intron | 50.0% |
| !! | TGCACAGCATTGGTTGGAGT+AGG | + | chr7_3:74754718-74754737 | None:intergenic | 50.0% |
| GGATACATGGTGGCTCAGAA+GGG | - | chr7_3:74754829-74754848 | Msa1123760:CDS | 50.0% | |
| !! | CAGATGGTGACGGTTCTATG+AGG | - | chr7_3:74755280-74755299 | Msa1123760:CDS | 50.0% |
| TATGAGGGAGGCGATAAAGG+CGG | - | chr7_3:74755296-74755315 | Msa1123760:CDS | 50.0% | |
| CATAGACGATGACGCGTACT+TGG | + | chr7_3:74755327-74755346 | None:intergenic | 50.0% | |
| !!! | TGAAGAGTTTTGGGGGGACT+TGG | - | chr7_3:74755449-74755468 | Msa1123760:CDS | 50.0% |
| GTGCGTGACGATTTCTTTGG+TGG | - | chr7_3:74755549-74755568 | Msa1123760:CDS | 50.0% | |
| CAGATGAGTTGTCAGCACAG+GGG | + | chr7_3:74755695-74755714 | None:intergenic | 50.0% | |
| GCAGATGAGTTGTCAGCACA+GGG | + | chr7_3:74755696-74755715 | None:intergenic | 50.0% | |
| ! | AGGTGTTGCACTGAGTGTGA+AGG | - | chr7_3:74755789-74755808 | Msa1123760:CDS | 50.0% |
| CCACCACTCCCAACAATGAT+CGG | + | chr7_3:74753941-74753960 | None:intergenic | 50.0% | |
| GAAGGTGAACGTGATGAAGG+TGG | - | chr7_3:74754214-74754233 | Msa1123760:intron | 50.0% | |
| GGTGGAGGTGATGAAAGTGA+AGG | - | chr7_3:74754232-74754251 | Msa1123760:intron | 50.0% | |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | - | chr7_3:74754620-74754639 | Msa1123760:intron | 50.0% |
| !! | TGCACAGCATTGGTTGGAGT+AGG | + | chr7_3:74754718-74754737 | None:intergenic | 50.0% |
| GGATACATGGTGGCTCAGAA+GGG | - | chr7_3:74754829-74754848 | Msa1123760:CDS | 50.0% | |
| !! | CAGATGGTGACGGTTCTATG+AGG | - | chr7_3:74755280-74755299 | Msa1123760:CDS | 50.0% |
| TATGAGGGAGGCGATAAAGG+CGG | - | chr7_3:74755296-74755315 | Msa1123760:CDS | 50.0% | |
| CATAGACGATGACGCGTACT+TGG | + | chr7_3:74755327-74755346 | None:intergenic | 50.0% | |
| !!! | TGAAGAGTTTTGGGGGGACT+TGG | - | chr7_3:74755449-74755468 | Msa1123760:CDS | 50.0% |
| GTGCGTGACGATTTCTTTGG+TGG | - | chr7_3:74755549-74755568 | Msa1123760:CDS | 50.0% | |
| CAGATGAGTTGTCAGCACAG+GGG | + | chr7_3:74755695-74755714 | None:intergenic | 50.0% | |
| GCAGATGAGTTGTCAGCACA+GGG | + | chr7_3:74755696-74755715 | None:intergenic | 50.0% | |
| ! | AGGTGTTGCACTGAGTGTGA+AGG | - | chr7_3:74755789-74755808 | Msa1123760:CDS | 50.0% |
| CCGATCATTGTTGGGAGTGG+TGG | - | chr7_3:74753938-74753957 | Msa1123760:CDS | 55.0% | |
| GGTGAACGTGATGAAGGTGG+AGG | - | chr7_3:74754217-74754236 | Msa1123760:intron | 55.0% | |
| TAGTGAACACGGAGCCTAGC+TGG | + | chr7_3:74754637-74754656 | None:intergenic | 55.0% | |
| GGGATACATGGTGGCTCAGA+AGG | - | chr7_3:74754828-74754847 | Msa1123760:CDS | 55.0% | |
| TACATGGTGGCTCAGAAGGG+TGG | - | chr7_3:74754832-74754851 | Msa1123760:CDS | 55.0% | |
| GCTCAGAAGGGTGGATATCC+CGG | - | chr7_3:74754841-74754860 | Msa1123760:CDS | 55.0% | |
| AAGGGTGGATATCCCGGTGT+TGG | - | chr7_3:74754847-74754866 | Msa1123760:CDS | 55.0% | |
| AGGGTGGATATCCCGGTGTT+GGG | - | chr7_3:74754848-74754867 | Msa1123760:CDS | 55.0% | |
| !! | TGGTGACGGTTCTATGAGGG+AGG | - | chr7_3:74755284-74755303 | Msa1123760:CDS | 55.0% |
| CGCGTCATCGTCTATGTGCT+TGG | - | chr7_3:74755331-74755350 | Msa1123760:CDS | 55.0% | |
| !!! | AGTTTTGGGGGGACTTGGTG+AGG | - | chr7_3:74755454-74755473 | Msa1123760:CDS | 55.0% |
| !!! | GTTTTGGGGGGACTTGGTGA+GGG | - | chr7_3:74755455-74755474 | Msa1123760:CDS | 55.0% |
| !! | GGGGACTTGGTGAGGGAAAA+TGG | - | chr7_3:74755462-74755481 | Msa1123760:CDS | 55.0% |
| CAGCACAGGGGATGAAAACC+TGG | + | chr7_3:74755683-74755702 | None:intergenic | 55.0% | |
| CGCAGATGAGTTGTCAGCAC+AGG | + | chr7_3:74755697-74755716 | None:intergenic | 55.0% | |
| TCTGCGTTGTCTTGAACGCG+AGG | - | chr7_3:74755711-74755730 | Msa1123760:CDS | 55.0% | |
| CCGATCATTGTTGGGAGTGG+TGG | - | chr7_3:74753938-74753957 | Msa1123760:CDS | 55.0% | |
| GGTGAACGTGATGAAGGTGG+AGG | - | chr7_3:74754217-74754236 | Msa1123760:intron | 55.0% | |
| TAGTGAACACGGAGCCTAGC+TGG | + | chr7_3:74754637-74754656 | None:intergenic | 55.0% | |
| GGGATACATGGTGGCTCAGA+AGG | - | chr7_3:74754828-74754847 | Msa1123760:CDS | 55.0% | |
| TACATGGTGGCTCAGAAGGG+TGG | - | chr7_3:74754832-74754851 | Msa1123760:CDS | 55.0% | |
| GCTCAGAAGGGTGGATATCC+CGG | - | chr7_3:74754841-74754860 | Msa1123760:CDS | 55.0% | |
| AAGGGTGGATATCCCGGTGT+TGG | - | chr7_3:74754847-74754866 | Msa1123760:CDS | 55.0% | |
| AGGGTGGATATCCCGGTGTT+GGG | - | chr7_3:74754848-74754867 | Msa1123760:CDS | 55.0% | |
| !! | TGGTGACGGTTCTATGAGGG+AGG | - | chr7_3:74755284-74755303 | Msa1123760:CDS | 55.0% |
| CGCGTCATCGTCTATGTGCT+TGG | - | chr7_3:74755331-74755350 | Msa1123760:CDS | 55.0% | |
| !!! | AGTTTTGGGGGGACTTGGTG+AGG | - | chr7_3:74755454-74755473 | Msa1123760:CDS | 55.0% |
| !!! | GTTTTGGGGGGACTTGGTGA+GGG | - | chr7_3:74755455-74755474 | Msa1123760:CDS | 55.0% |
| !! | GGGGACTTGGTGAGGGAAAA+TGG | - | chr7_3:74755462-74755481 | Msa1123760:CDS | 55.0% |
| CAGCACAGGGGATGAAAACC+TGG | + | chr7_3:74755683-74755702 | None:intergenic | 55.0% | |
| CGCAGATGAGTTGTCAGCAC+AGG | + | chr7_3:74755697-74755716 | None:intergenic | 55.0% | |
| TCTGCGTTGTCTTGAACGCG+AGG | - | chr7_3:74755711-74755730 | Msa1123760:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 74753848 | 74755819 | 74753848 | ID=Msa1123760;Name=Msa1123760 |
| chr7_3 | mRNA | 74753848 | 74755819 | 74753848 | ID=Msa1123760-mRNA-1;Parent=Msa1123760;Name=Msa1123760-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|0.2|0.16|6|0|372 |
| chr7_3 | exon | 74755654 | 74755819 | 74755654 | ID=Msa1123760-mRNA-1:exon:19943;Parent=Msa1123760-mRNA-1 |
| chr7_3 | exon | 74755399 | 74755620 | 74755399 | ID=Msa1123760-mRNA-1:exon:19942;Parent=Msa1123760-mRNA-1 |
| chr7_3 | exon | 74755139 | 74755383 | 74755139 | ID=Msa1123760-mRNA-1:exon:19941;Parent=Msa1123760-mRNA-1 |
| chr7_3 | exon | 74754997 | 74755126 | 74754997 | ID=Msa1123760-mRNA-1:exon:19940;Parent=Msa1123760-mRNA-1 |
| chr7_3 | exon | 74754803 | 74754969 | 74754803 | ID=Msa1123760-mRNA-1:exon:19939;Parent=Msa1123760-mRNA-1 |
| chr7_3 | exon | 74753848 | 74754033 | 74753848 | ID=Msa1123760-mRNA-1:exon:19938;Parent=Msa1123760-mRNA-1 |
| chr7_3 | CDS | 74755654 | 74755819 | 74755654 | ID=Msa1123760-mRNA-1:cds;Parent=Msa1123760-mRNA-1 |
| chr7_3 | CDS | 74755399 | 74755620 | 74755399 | ID=Msa1123760-mRNA-1:cds;Parent=Msa1123760-mRNA-1 |
| chr7_3 | CDS | 74755139 | 74755383 | 74755139 | ID=Msa1123760-mRNA-1:cds;Parent=Msa1123760-mRNA-1 |
| chr7_3 | CDS | 74754997 | 74755126 | 74754997 | ID=Msa1123760-mRNA-1:cds;Parent=Msa1123760-mRNA-1 |
| chr7_3 | CDS | 74754803 | 74754969 | 74754803 | ID=Msa1123760-mRNA-1:cds;Parent=Msa1123760-mRNA-1 |
| chr7_3 | CDS | 74753848 | 74754033 | 74753848 | ID=Msa1123760-mRNA-1:cds;Parent=Msa1123760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
