Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129990 | AES82715.1 | 79.310 | 58 | 12 | 0 | 156 | 213 | 38 | 95 | 5.75e-19 | 89.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129990 | sp|Q8VYG0|LRL13_ARATH | 36.552 | 145 | 81 | 3 | 94 | 228 | 397 | 540 | 1.40e-15 | 79.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129990 | G7L2Z1 | 79.310 | 58 | 12 | 0 | 156 | 213 | 38 | 95 | 2.75e-19 | 89.7 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129990 | MtrunA17_Chr6g0467601 | 50.505 | 99 | 42 | 3 | 136 | 228 | 239 | 336 | 6.13e-19 | 85.5 |
| Msa1129990 | MtrunA17_Chr6g0483931 | 50.505 | 99 | 42 | 3 | 136 | 228 | 454 | 551 | 4.84e-18 | 83.2 |
| Msa1129990 | MtrunA17_Chr6g0467631 | 51.190 | 84 | 36 | 2 | 149 | 228 | 450 | 532 | 9.58e-17 | 79.3 |
| Msa1129990 | MtrunA17_Chr1g0209361 | 50.000 | 84 | 37 | 2 | 149 | 228 | 443 | 525 | 9.93e-17 | 79.3 |
| Msa1129990 | MtrunA17_Chr7g0251121 | 48.352 | 91 | 39 | 3 | 145 | 228 | 460 | 549 | 7.32e-16 | 76.6 |
| Msa1129990 | MtrunA17_Chr1g0209381 | 48.810 | 84 | 38 | 2 | 149 | 228 | 428 | 510 | 1.18e-14 | 73.2 |
| Msa1129990 | MtrunA17_Chr1g0209431 | 47.619 | 84 | 39 | 2 | 149 | 228 | 438 | 520 | 1.22e-14 | 73.2 |
| Msa1129990 | MtrunA17_Chr8g0376061 | 51.190 | 84 | 36 | 2 | 149 | 228 | 436 | 518 | 1.33e-14 | 72.8 |
| Msa1129990 | MtrunA17_Chr5g0423061 | 50.000 | 84 | 37 | 2 | 149 | 228 | 413 | 495 | 2.56e-14 | 72.0 |
| Msa1129990 | MtrunA17_Chr1g0209391 | 47.619 | 84 | 39 | 2 | 149 | 228 | 400 | 482 | 3.11e-14 | 71.6 |
| Msa1129990 | MtrunA17_Chr1g0158211 | 34.641 | 153 | 83 | 4 | 92 | 228 | 182 | 333 | 4.99e-14 | 70.9 |
| Msa1129990 | MtrunA17_Chr1g0158201 | 34.641 | 153 | 83 | 4 | 92 | 228 | 444 | 595 | 9.46e-14 | 70.5 |
| Msa1129990 | MtrunA17_Chr8g0374031 | 44.944 | 89 | 39 | 2 | 149 | 231 | 434 | 518 | 1.77e-13 | 69.7 |
| Msa1129990 | MtrunA17_Chr6g0483731 | 33.775 | 151 | 84 | 6 | 90 | 228 | 107 | 253 | 5.25e-13 | 67.8 |
| Msa1129990 | MtrunA17_Chr1g0158291 | 34.899 | 149 | 79 | 4 | 92 | 228 | 95 | 237 | 1.74e-12 | 66.2 |
| Msa1129990 | MtrunA17_Chr1g0158251 | 33.333 | 153 | 85 | 4 | 92 | 228 | 449 | 600 | 2.72e-12 | 66.2 |
| Msa1129990 | MtrunA17_Chr1g0158231 | 33.333 | 153 | 85 | 4 | 92 | 228 | 160 | 311 | 3.90e-12 | 65.5 |
| Msa1129990 | MtrunA17_Chr1g0158261 | 32.680 | 153 | 86 | 4 | 92 | 228 | 440 | 591 | 8.29e-12 | 64.7 |
| Msa1129990 | MtrunA17_Chr1g0158171 | 33.333 | 153 | 85 | 4 | 92 | 228 | 171 | 322 | 3.05e-11 | 62.8 |
| Msa1129990 | MtrunA17_Chr1g0148501 | 34.641 | 153 | 82 | 6 | 92 | 228 | 463 | 613 | 3.91e-11 | 62.8 |
| Msa1129990 | MtrunA17_Chr1g0148461 | 32.500 | 160 | 76 | 5 | 92 | 228 | 470 | 620 | 6.95e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129990 | AT5G38210.2 | 36.552 | 145 | 81 | 3 | 94 | 228 | 409 | 552 | 1.23e-16 | 79.3 |
| Msa1129990 | AT5G38210.1 | 36.552 | 145 | 81 | 3 | 94 | 228 | 397 | 540 | 1.42e-16 | 79.3 |
| Msa1129990 | AT5G38210.3 | 36.552 | 145 | 81 | 3 | 94 | 228 | 391 | 534 | 1.71e-16 | 79.0 |
| Msa1129990 | AT1G66880.2 | 36.552 | 145 | 81 | 3 | 94 | 228 | 627 | 770 | 1.88e-15 | 75.9 |
| Msa1129990 | AT1G66880.3 | 36.552 | 145 | 81 | 3 | 94 | 228 | 385 | 528 | 1.89e-15 | 75.9 |
| Msa1129990 | AT1G66880.1 | 36.552 | 145 | 81 | 3 | 94 | 228 | 1006 | 1149 | 2.14e-15 | 75.9 |
| Msa1129990 | AT1G18390.2 | 46.429 | 84 | 40 | 2 | 149 | 228 | 444 | 526 | 1.36e-14 | 73.2 |
| Msa1129990 | AT1G18390.1 | 37.313 | 134 | 73 | 5 | 105 | 228 | 388 | 520 | 1.93e-14 | 72.8 |
| Msa1129990 | AT2G23450.2 | 33.784 | 148 | 84 | 3 | 94 | 231 | 387 | 530 | 2.92e-14 | 72.4 |
| Msa1129990 | AT2G23450.1 | 33.784 | 148 | 84 | 3 | 94 | 231 | 387 | 530 | 2.92e-14 | 72.4 |
| Msa1129990 | AT1G25390.1 | 44.792 | 96 | 40 | 3 | 137 | 228 | 388 | 474 | 3.59e-14 | 72.0 |
| Msa1129990 | AT1G25390.2 | 44.792 | 96 | 40 | 3 | 137 | 228 | 388 | 474 | 3.59e-14 | 72.0 |
| Msa1129990 | AT5G66790.1 | 34.899 | 149 | 82 | 6 | 94 | 228 | 353 | 500 | 4.04e-12 | 65.9 |
| Msa1129990 | AT4G39110.1 | 34.746 | 118 | 61 | 3 | 118 | 228 | 600 | 708 | 8.22e-12 | 65.1 |
| Msa1129990 | AT1G79670.1 | 30.909 | 165 | 72 | 5 | 92 | 228 | 454 | 604 | 2.44e-11 | 63.5 |
| Msa1129990 | AT2G21480.1 | 34.746 | 118 | 61 | 3 | 118 | 228 | 599 | 707 | 5.18e-11 | 62.8 |
Find 40 sgRNAs with CRISPR-Local
Find 388 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGTAACGACATAATATT+TGG | 0.222579 | 7_3:-82060864 | None:intergenic |
| TTTCAGGAAAGCGTAGATTT+TGG | 0.265085 | 7_3:+82061270 | Msa1129990:CDS |
| GAGCACATATCTGAAACTTT+TGG | 0.274324 | 7_3:+82053981 | Msa1129990:CDS |
| CATTTGATCATTATAGCAAT+TGG | 0.284867 | 7_3:+82053871 | Msa1129990:CDS |
| TCCTTGAAGCGAATTATATT+CGG | 0.307244 | 7_3:-82060272 | None:intergenic |
| CTAATAGAGTGGAGGCAATT+AGG | 0.312378 | 7_3:+82061246 | Msa1129990:CDS |
| TCAGAATGATCTAGATAAAC+TGG | 0.347908 | 7_3:-82061182 | None:intergenic |
| CTTGTGCACCTGTTCGAATA+TGG | 0.353234 | 7_3:-82061154 | None:intergenic |
| ATTTGATCATTATAGCAATT+GGG | 0.374356 | 7_3:+82053872 | Msa1129990:CDS |
| GAATACCGTCATTTCAAGTT+CGG | 0.415463 | 7_3:+82053822 | Msa1129990:CDS |
| CTTAAAATGAGTAAATCAAA+TGG | 0.416145 | 7_3:-82053928 | None:intergenic |
| CCAAATATTATGTCGTTACA+TGG | 0.416832 | 7_3:+82060864 | Msa1129990:CDS |
| CCCGAATATAATTCGCTTCA+AGG | 0.424576 | 7_3:+82060271 | Msa1129990:CDS |
| TGAGTAATGATACTCCGTAT+TGG | 0.463022 | 7_3:+82054119 | Msa1129990:CDS |
| CCTTGAAGCGAATTATATTC+GGG | 0.486169 | 7_3:-82060271 | None:intergenic |
| GATCAAAGCCATATTCGAAC+AGG | 0.496465 | 7_3:+82061146 | Msa1129990:CDS |
| TTTGATCATTATAGCAATTG+GGG | 0.499726 | 7_3:+82053873 | Msa1129990:CDS |
| TTATCAACCACAGGTCTCTT+CGG | 0.501774 | 7_3:+82060246 | Msa1129990:CDS |
| AAGTGATAGTTCTAATAGAG+TGG | 0.507803 | 7_3:+82061235 | Msa1129990:CDS |
| CTATCCAAGTTGCTCCAATA+CGG | 0.521390 | 7_3:-82054133 | None:intergenic |
| TCGGTTGATATAGAACTAGC+TGG | 0.526267 | 7_3:+82053841 | Msa1129990:CDS |
| TAGAACGAACTTAAAACTCA+AGG | 0.532153 | 7_3:+82060830 | Msa1129990:intron |
| TTAAAATGAGTAAATCAAAT+GGG | 0.540804 | 7_3:-82053927 | None:intergenic |
| ATCAACCGAACTTGAAATGA+CGG | 0.554267 | 7_3:-82053827 | None:intergenic |
| CATATTCGAACAGGTGCACA+AGG | 0.558852 | 7_3:+82061155 | Msa1129990:CDS |
| GTAACGACATAATATTTGGA+TGG | 0.561090 | 7_3:-82060860 | None:intergenic |
| ACATAATATTTGGATGGGAA+AGG | 0.561998 | 7_3:-82060854 | None:intergenic |
| TAACGACATAATATTTGGAT+GGG | 0.564181 | 7_3:-82060859 | None:intergenic |
| TACTCCGTATTGGAGCAACT+TGG | 0.565144 | 7_3:+82054129 | Msa1129990:CDS |
| TTTCCAGATTGATGAGAATG+TGG | 0.567042 | 7_3:+82060214 | Msa1129990:intron |
| GCTGACTTTCATGCAAAAGT+AGG | 0.574540 | 7_3:+82061092 | Msa1129990:CDS |
| CTCTCAACAACAAATGCAAG+AGG | 0.589133 | 7_3:-82053961 | None:intergenic |
| CTAGAGAGATTATCAACCAC+AGG | 0.592807 | 7_3:+82060237 | Msa1129990:CDS |
| TTACATGGGTGCACCTCACG+TGG | 0.616764 | 7_3:+82060879 | Msa1129990:CDS |
| GGTTAGGATGAATATTGCAG+TGG | 0.622926 | 7_3:+82061001 | Msa1129990:intron |
| CAAATATTATGTCGTTACAT+GGG | 0.630277 | 7_3:+82060865 | Msa1129990:CDS |
| TGATAGTTCTAATAGAGTGG+AGG | 0.652354 | 7_3:+82061238 | Msa1129990:CDS |
| TCGGGTGCCGAAGAGACCTG+TGG | 0.684900 | 7_3:-82060253 | None:intergenic |
| GAATATAATTCGCTTCAAGG+AGG | 0.726990 | 7_3:+82060274 | Msa1129990:CDS |
| ATATTCGAACAGGTGCACAA+GGG | 0.753564 | 7_3:+82061156 | Msa1129990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAATATATAATATAAA+TGG | - | chr7_3:82059448-82059467 | None:intergenic | 0.0% |
| !! | AAATTCCTAAAAAAAAAAAA+AGG | + | chr7_3:82054692-82054711 | Msa1129990:intron | 10.0% |
| !!! | ATTAACCTTTTTTTTTTTTT+AGG | - | chr7_3:82054700-82054719 | None:intergenic | 10.0% |
| !! | TTCAAAACAAAAAATAAAAT+TGG | - | chr7_3:82055182-82055201 | None:intergenic | 10.0% |
| !!! | AATTACTTACTTTTATTAAT+AGG | + | chr7_3:82055400-82055419 | Msa1129990:intron | 10.0% |
| !! | TTTAAGAAAATAAATATAGA+AGG | - | chr7_3:82055517-82055536 | None:intergenic | 10.0% |
| !!! | ATTTTGAAACAATTTTTTTT+TGG | + | chr7_3:82057208-82057227 | Msa1129990:intron | 10.0% |
| !! | TATATGCATATTTAATTAAA+CGG | - | chr7_3:82058279-82058298 | None:intergenic | 10.0% |
| !!! | AAAATGTTATATTTTAAATG+AGG | + | chr7_3:82059477-82059496 | Msa1129990:intron | 10.0% |
| !!! | AAATGTTATATTTTAAATGA+GGG | + | chr7_3:82059478-82059497 | Msa1129990:intron | 10.0% |
| !!! | ATATTTTTTAAAAAGTGAAA+TGG | - | chr7_3:82060099-82060118 | None:intergenic | 10.0% |
| !! | TTAAAATGAGTAAATCAAAT+GGG | - | chr7_3:82053930-82053949 | None:intergenic | 15.0% |
| !!! | TTCAAAAAAATTGTATTTTG+AGG | - | chr7_3:82054054-82054073 | None:intergenic | 15.0% |
| !! | GAAATGTAGATAAAAAAATT+AGG | + | chr7_3:82054259-82054278 | Msa1129990:intron | 15.0% |
| !!! | TATTTTTTGTTTTGAAAACT+CGG | + | chr7_3:82055186-82055205 | Msa1129990:intron | 15.0% |
| !! | GTTTAAAAATTGCTTAAATA+GGG | - | chr7_3:82055269-82055288 | None:intergenic | 15.0% |
| !! | TGTTTAAAAATTGCTTAAAT+AGG | - | chr7_3:82055270-82055289 | None:intergenic | 15.0% |
| !! | ATAAGAAAATACAAATTTGT+GGG | - | chr7_3:82055348-82055367 | None:intergenic | 15.0% |
| !!! | TTTTAATTAAACGAAAATAG+AGG | + | chr7_3:82055882-82055901 | Msa1129990:intron | 15.0% |
| !! | AAAATAGAGGTTAAAAAATT+CGG | + | chr7_3:82055895-82055914 | Msa1129990:intron | 15.0% |
| !! | AAAAAATTAGTGTATTTATC+CGG | + | chr7_3:82055962-82055981 | Msa1129990:intron | 15.0% |
| !! | ATTTATTGAAAAAAGAAAGT+GGG | - | chr7_3:82057828-82057847 | None:intergenic | 15.0% |
| !! | AATTTATTGAAAAAAGAAAG+TGG | - | chr7_3:82057827-82057846 | None:intergenic | 15.0% |
| !!! | GAAAAGTTAATTTTGATTAA+AGG | - | chr7_3:82056400-82056419 | None:intergenic | 15.0% |
| !! | ACATGTTAAGAAATTTAAAA+TGG | - | chr7_3:82056660-82056679 | None:intergenic | 15.0% |
| !! | ATAAATAGTCATTGTTAAAA+GGG | - | chr7_3:82056707-82056726 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr7_3:82057081-82057100 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr7_3:82057080-82057099 | Msa1129990:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr7_3:82057104-82057123 | Msa1129990:intron | 15.0% |
| !!! | CATATAATTTTAACTATTCA+TGG | - | chr7_3:82057432-82057451 | None:intergenic | 15.0% |
| !! | TGCAAAAAAAAAAAATTTGT+TGG | + | chr7_3:82057751-82057770 | Msa1129990:intron | 15.0% |
| !!! | TTGATGTTAATATTCTAAAA+CGG | + | chr7_3:82057929-82057948 | Msa1129990:intron | 15.0% |
| !!! | TTTTAATTAAACGAAAATAG+AGG | - | chr7_3:82055882-82055901 | None:intergenic | 15.0% |
| !!! | TTTTTAGCATCATTATAAAA+GGG | - | chr7_3:82058220-82058239 | None:intergenic | 15.0% |
| !!! | ATTTTTAGCATCATTATAAA+AGG | - | chr7_3:82058221-82058240 | None:intergenic | 15.0% |
| !! | TTAAATATGCATATATCTAA+TGG | + | chr7_3:82058284-82058303 | Msa1129990:intron | 15.0% |
| !!! | AAATTTCGTTTAAAATTAAG+GGG | - | chr7_3:82058889-82058908 | None:intergenic | 15.0% |
| !!! | CAAATTTCGTTTAAAATTAA+GGG | - | chr7_3:82058890-82058909 | None:intergenic | 15.0% |
| !! | TTAATTAGACTTATGAAATA+AGG | + | chr7_3:82059003-82059022 | Msa1129990:intron | 15.0% |
| !! | TTGAATCAATAAAATTGTTA+AGG | - | chr7_3:82059061-82059080 | None:intergenic | 15.0% |
| !! | TATAAACATTACAAGAAAAA+TGG | - | chr7_3:82059386-82059405 | None:intergenic | 15.0% |
| !!! | AATGTTATATTTTAAATGAG+GGG | + | chr7_3:82059479-82059498 | Msa1129990:intron | 15.0% |
| !! | ATAAACAACTAAAAAATATG+TGG | - | chr7_3:82059749-82059768 | None:intergenic | 15.0% |
| !! | TACATGAAAAATATCAAAAT+TGG | - | chr7_3:82059880-82059899 | None:intergenic | 15.0% |
| !!! | AATTGTTTGATCTTTTTATA+TGG | - | chr7_3:82060526-82060545 | None:intergenic | 15.0% |
| !!! | TAAGATTATGAATTTTCAAT+TGG | + | chr7_3:82060545-82060564 | Msa1129990:intron | 15.0% |
| !! | ATTTGATCATTATAGCAATT+GGG | + | chr7_3:82053872-82053891 | Msa1129990:CDS | 20.0% |
| !! | CTTAAAATGAGTAAATCAAA+TGG | - | chr7_3:82053931-82053950 | None:intergenic | 20.0% |
| !!! | TGATTTACTCATTTTAAGTT+TGG | + | chr7_3:82053933-82053952 | Msa1129990:CDS | 20.0% |
| !!! | GATTTACTCATTTTAAGTTT+GGG | + | chr7_3:82053934-82053953 | Msa1129990:CDS | 20.0% |
| !!! | GAGCTAATTTAGAAATATTT+TGG | - | chr7_3:82054032-82054051 | None:intergenic | 20.0% |
| !! | CAAACTTTAATCTAAACTTA+CGG | - | chr7_3:82054219-82054238 | None:intergenic | 20.0% |
| !! | ATATACATTCTAAATGTAGT+AGG | - | chr7_3:82055074-82055093 | None:intergenic | 20.0% |
| !! | TAAGAAAATACAAATTTGTG+GGG | - | chr7_3:82055347-82055366 | None:intergenic | 20.0% |
| !! | GATAAGAAAATACAAATTTG+TGG | - | chr7_3:82055349-82055368 | None:intergenic | 20.0% |
| !!! | CTTGCAATTTTTATTTTGTT+TGG | + | chr7_3:82055627-82055646 | Msa1129990:intron | 20.0% |
| !!! | TTTTATTTTGTTTGGAAAGA+AGG | + | chr7_3:82055635-82055654 | Msa1129990:intron | 20.0% |
| !!! | ATTTTTAGCATCACTATAAA+AGG | + | chr7_3:82055745-82055764 | Msa1129990:intron | 20.0% |
| !!! | TTTTTAGCATCACTATAAAA+GGG | + | chr7_3:82055746-82055765 | Msa1129990:intron | 20.0% |
| !! | ACCAAAATATATTTGAACTT+AGG | + | chr7_3:82055784-82055803 | Msa1129990:intron | 20.0% |
| !!! | TCCTAAGTTCAAATATATTT+TGG | - | chr7_3:82055788-82055807 | None:intergenic | 20.0% |
| !! | TATATTTGAACTTAGGAAAA+AGG | + | chr7_3:82055791-82055810 | Msa1129990:intron | 20.0% |
| !! | AAATAGAGGTTAAAAAATTC+GGG | + | chr7_3:82055896-82055915 | Msa1129990:intron | 20.0% |
| !!! | ACACTAATTTTTTTGACAAT+CGG | - | chr7_3:82055955-82055974 | None:intergenic | 20.0% |
| !!! | ATCTGTTCATTTTTAAATGT+AGG | + | chr7_3:82056044-82056063 | Msa1129990:intron | 20.0% |
| !! | GGGAAAAAATAGAAATATAT+TGG | - | chr7_3:82056145-82056164 | None:intergenic | 20.0% |
| !! | TGTGCAAAAAAAAAATTTGT+TGG | - | chr7_3:82056242-82056261 | None:intergenic | 20.0% |
| !!! | TTAATTTTGATTAAAGGAGT+TGG | - | chr7_3:82056394-82056413 | None:intergenic | 20.0% |
| !! | GATAAATAGTCATTGTTAAA+AGG | - | chr7_3:82056708-82056727 | None:intergenic | 20.0% |
| !!! | TATCAATTTTTTTGGTGATA+GGG | - | chr7_3:82056750-82056769 | None:intergenic | 20.0% |
| !!! | TTATCAATTTTTTTGGTGAT+AGG | - | chr7_3:82056751-82056770 | None:intergenic | 20.0% |
| !!! | GTAACAATAATTTTCAACTA+GGG | - | chr7_3:82056779-82056798 | None:intergenic | 20.0% |
| !!! | TGTAACAATAATTTTCAACT+AGG | - | chr7_3:82056780-82056799 | None:intergenic | 20.0% |
| !!! | ATAGTTTTACAAAGAAAAAG+AGG | - | chr7_3:82056855-82056874 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr7_3:82057090-82057109 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr7_3:82057167-82057186 | Msa1129990:intron | 20.0% |
| !!! | GGAAAAGTTAATTTGATTAA+AGG | + | chr7_3:82057591-82057610 | Msa1129990:intron | 20.0% |
| !! | TTTATTGAAAAAAGAAAGTG+TGG | + | chr7_3:82057829-82057848 | Msa1129990:intron | 20.0% |
| !!! | TTATTGAAAAAAGAAAGTGT+GGG | + | chr7_3:82057830-82057849 | Msa1129990:intron | 20.0% |
| !! | TATATTGGTAGATTAAAACA+AGG | + | chr7_3:82057865-82057884 | Msa1129990:intron | 20.0% |
| !! | ATATTGGTAGATTAAAACAA+GGG | + | chr7_3:82057866-82057885 | Msa1129990:intron | 20.0% |
| !! | TATCAATTAGTGTATTTACT+CGG | - | chr7_3:82058033-82058052 | None:intergenic | 20.0% |
| !! | AATAGAGGTTAAAAAATTCT+GGG | - | chr7_3:82058069-82058088 | None:intergenic | 20.0% |
| !! | AAATAGAGGTTAAAAAATTC+TGG | - | chr7_3:82055896-82055915 | None:intergenic | 20.0% |
| !! | TTGAACCAAAATATATTTCA+AGG | - | chr7_3:82058186-82058205 | None:intergenic | 20.0% |
| !!! | TTTTATTTTGTTTGGAAAGA+AGG | - | chr7_3:82055635-82055654 | None:intergenic | 20.0% |
| !!! | CTTGCAATTTTTATTTTGTT+TGG | - | chr7_3:82055627-82055646 | None:intergenic | 20.0% |
| !! | TTAGTAAATGTTTCAAACAA+CGG | - | chr7_3:82058487-82058506 | None:intergenic | 20.0% |
| !! | ATCATGATCATCAAATTTAT+AGG | - | chr7_3:82058628-82058647 | None:intergenic | 20.0% |
| !!! | GCAAATTTCGTTTAAAATTA+AGG | - | chr7_3:82058891-82058910 | None:intergenic | 20.0% |
| !! | CTTGTAAATAAAGAAAATAG+TGG | - | chr7_3:82059409-82059428 | None:intergenic | 20.0% |
| !!! | CACTATTTTCTTTATTTACA+AGG | + | chr7_3:82059407-82059426 | Msa1129990:intron | 20.0% |
| !! | AAAACTATTATTTAGACATC+TGG | + | chr7_3:82060150-82060169 | Msa1129990:intron | 20.0% |
| !! | AAACTATTATTTAGACATCT+GGG | + | chr7_3:82060151-82060170 | Msa1129990:intron | 20.0% |
| !! | TCATATTATATTTCTTGTCT+AGG | + | chr7_3:82060734-82060753 | Msa1129990:intron | 20.0% |
| ! | CATTTGATCATTATAGCAAT+TGG | + | chr7_3:82053871-82053890 | Msa1129990:CDS | 25.0% |
| ! | TTTGATCATTATAGCAATTG+GGG | + | chr7_3:82053873-82053892 | Msa1129990:CDS | 25.0% |
| ! | AAAGAACAACGTTTATATGT+TGG | + | chr7_3:82054073-82054092 | Msa1129990:intron | 25.0% |
| ! | TTTAACACAATTTCTACTTC+AGG | + | chr7_3:82054184-82054203 | Msa1129990:intron | 25.0% |
| ! | TTTAATCTAAACTTACGGTT+TGG | - | chr7_3:82054214-82054233 | None:intergenic | 25.0% |
| !! | TATTATGAACCTTGTTTCAT+TGG | - | chr7_3:82054290-82054309 | None:intergenic | 25.0% |
| ! | AAACAAGGTTCATAATAAGA+AGG | + | chr7_3:82054293-82054312 | Msa1129990:intron | 25.0% |
| ! | CATAGAAAAAATACAGAAGT+TGG | - | chr7_3:82054530-82054549 | None:intergenic | 25.0% |
| ! | TGATTGAAGATATTCATAAC+TGG | + | chr7_3:82054591-82054610 | Msa1129990:intron | 25.0% |
| ! | ATATTCATAACTGGTGAATA+CGG | + | chr7_3:82054600-82054619 | Msa1129990:intron | 25.0% |
| !! | TAACATTTTTCTCATGAAGA+TGG | + | chr7_3:82054878-82054897 | Msa1129990:intron | 25.0% |
| !!! | AGAAGTATTTTGTAATTTGC+AGG | + | chr7_3:82054961-82054980 | Msa1129990:intron | 25.0% |
| !!! | CTTTGAAGTAAAATTGATTG+AGG | - | chr7_3:82055294-82055313 | None:intergenic | 25.0% |
| !! | CTCAATCAATTTTACTTCAA+AGG | + | chr7_3:82055292-82055311 | Msa1129990:intron | 25.0% |
| ! | AGAAAATAAATATAGAAGGC+TGG | - | chr7_3:82055513-82055532 | None:intergenic | 25.0% |
| ! | TATATTTAATTAAACGGTGC+TGG | + | chr7_3:82055693-82055712 | Msa1129990:intron | 25.0% |
| !! | AATGATAGAGATTTTATTGC+TGG | + | chr7_3:82055847-82055866 | Msa1129990:intron | 25.0% |
| ! | AATAGAGGTTAAAAAATTCG+GGG | + | chr7_3:82055897-82055916 | Msa1129990:intron | 25.0% |
| !!! | CACTAATTTTTTTGACAATC+GGG | - | chr7_3:82055954-82055973 | None:intergenic | 25.0% |
| ! | ATATTGGTAGATTAAAACGA+GGG | - | chr7_3:82056129-82056148 | None:intergenic | 25.0% |
| ! | TATATTGGTAGATTAAAACG+AGG | - | chr7_3:82056130-82056149 | None:intergenic | 25.0% |
| !!! | GACAATTGTTTGTTATAAGA+TGG | - | chr7_3:82056271-82056290 | None:intergenic | 25.0% |
| !!! | TGCACTTGAATTTTTTAACA+AGG | + | chr7_3:82056502-82056521 | Msa1129990:intron | 25.0% |
| !!! | GCACTTGAATTTTTTAACAA+GGG | + | chr7_3:82056503-82056522 | Msa1129990:intron | 25.0% |
| ! | TTAAAATGGTAAGTTTGTCT+TGG | - | chr7_3:82056646-82056665 | None:intergenic | 25.0% |
| !!! | ATCAATTTTTTTGGTGATAG+GGG | - | chr7_3:82056749-82056768 | None:intergenic | 25.0% |
| !! | ATCATTTGATTGACAACTTT+TGG | - | chr7_3:82056885-82056904 | None:intergenic | 25.0% |
| ! | AGATTCCATTAATGTTCAAA+AGG | + | chr7_3:82057529-82057548 | Msa1129990:intron | 25.0% |
| !! | TTCTTCCTTTTGAACATTAA+TGG | - | chr7_3:82057537-82057556 | None:intergenic | 25.0% |
| !! | GTTAATTTGATTAAAGGAGT+TGG | + | chr7_3:82057597-82057616 | Msa1129990:intron | 25.0% |
| ! | GGGAAAAAATAGGAATATAT+TGG | + | chr7_3:82057850-82057869 | Msa1129990:intron | 25.0% |
| !! | GATTAAAACAAGGGTATAAT+AGG | + | chr7_3:82057875-82057894 | Msa1129990:intron | 25.0% |
| ! | GGCATTTAAAAATAAACAGA+TGG | + | chr7_3:82057950-82057969 | Msa1129990:intron | 25.0% |
| ! | GTTAGACATATAATTAAGGA+TGG | - | chr7_3:82058000-82058019 | None:intergenic | 25.0% |
| ! | CTGAGTTAGACATATAATTA+AGG | - | chr7_3:82058004-82058023 | None:intergenic | 25.0% |
| ! | TATATTTCAAGGTAGGAAAA+AGG | - | chr7_3:82058175-82058194 | None:intergenic | 25.0% |
| !! | TCCTACCTTGAAATATATTT+TGG | + | chr7_3:82058178-82058197 | Msa1129990:intron | 25.0% |
| ! | ACCAAAATATATTTCAAGGT+AGG | - | chr7_3:82058182-82058201 | None:intergenic | 25.0% |
| ! | GGAAAACTTAGAATCAAATT+CGG | + | chr7_3:82058436-82058455 | Msa1129990:intron | 25.0% |
| !!! | GCATAATTTTAAAATTGTCG+CGG | + | chr7_3:82058656-82058675 | Msa1129990:intron | 25.0% |
| ! | AGGGAAATAAAAAATTAGGT+GGG | - | chr7_3:82058921-82058940 | None:intergenic | 25.0% |
| ! | ACATTACAAGAAAAATGGAA+AGG | - | chr7_3:82059381-82059400 | None:intergenic | 25.0% |
| ! | AATGAAAGTGAATAGAAAGA+AGG | - | chr7_3:82059602-82059621 | None:intergenic | 25.0% |
| ! | GTAATAGGAAAGATTGTTTA+AGG | - | chr7_3:82059625-82059644 | None:intergenic | 25.0% |
| ! | TCAAAGATGAAACTAATTCT+TGG | + | chr7_3:82059846-82059865 | Msa1129990:intron | 25.0% |
| !!! | GATTTCCTACATTTTTTGAA+AGG | + | chr7_3:82059930-82059949 | Msa1129990:intron | 25.0% |
| ! | ATTAGAACAAGAGATAACTT+TGG | + | chr7_3:82060064-82060083 | Msa1129990:intron | 25.0% |
| !!! | GATTTTATTTGTTCATCTGT+TGG | + | chr7_3:82060301-82060320 | Msa1129990:intron | 25.0% |
| !! | TTGTTAACTGTTACTTCAAT+GGG | + | chr7_3:82060362-82060381 | Msa1129990:intron | 25.0% |
| ! | TTACTATTGCTAAATGAGTA+GGG | - | chr7_3:82060414-82060433 | None:intergenic | 25.0% |
| ! | ATTACTATTGCTAAATGAGT+AGG | - | chr7_3:82060415-82060434 | None:intergenic | 25.0% |
| ! | TACTCATTTAGCAATAGTAA+TGG | + | chr7_3:82060414-82060433 | Msa1129990:intron | 25.0% |
| !!! | TAGTAATGGAAAGTGTTTTA+TGG | + | chr7_3:82060428-82060447 | Msa1129990:intron | 25.0% |
| ! | TATAATGACTATTGACAGTA+AGG | - | chr7_3:82060489-82060508 | None:intergenic | 25.0% |
| ! | AAAACATACTCAATTTCCTA+TGG | - | chr7_3:82060651-82060670 | None:intergenic | 25.0% |
| ! | TAACGACATAATATTTGGAT+GGG | - | chr7_3:82060862-82060881 | None:intergenic | 25.0% |
| ! | CAAATATTATGTCGTTACAT+GGG | + | chr7_3:82060865-82060884 | Msa1129990:CDS | 25.0% |
| ! | CAATATAGGGATAATTAACT+TGG | + | chr7_3:82060976-82060995 | Msa1129990:intron | 25.0% |
| TAGGATTATCCAATGAAACA+AGG | + | chr7_3:82054278-82054297 | Msa1129990:intron | 30.0% | |
| AAGGTTCATAATAAGAAGGA+CGG | + | chr7_3:82054297-82054316 | Msa1129990:intron | 30.0% | |
| GTGATATCTGAAAGCAAAAT+TGG | + | chr7_3:82054343-82054362 | Msa1129990:intron | 30.0% | |
| ACGATTAATAAGAGTCATGA+CGG | + | chr7_3:82054477-82054496 | Msa1129990:intron | 30.0% | |
| ACTAACTCTTGAAATTGCAA+CGG | - | chr7_3:82054562-82054581 | None:intergenic | 30.0% | |
| AACTAATCTAACTTTGAACG+TGG | + | chr7_3:82054629-82054648 | Msa1129990:intron | 30.0% | |
| GTCAAAATATTGCTGATAGA+TGG | + | chr7_3:82054902-82054921 | Msa1129990:intron | 30.0% | |
| TACATTCTAAATGTAGTAGG+CGG | - | chr7_3:82055071-82055090 | None:intergenic | 30.0% | |
| !! | ATTGAACACTTTGGATTAGT+CGG | - | chr7_3:82055226-82055245 | None:intergenic | 30.0% |
| AACTTAGGAAAAAGGCTAAT+AGG | + | chr7_3:82055799-82055818 | Msa1129990:intron | 30.0% | |
| ! | GATTAAAACGAGGGTATAAT+AGG | - | chr7_3:82056120-82056139 | None:intergenic | 30.0% |
| !!! | ATTTTGATTAAAGGAGTTGG+AGG | - | chr7_3:82056391-82056410 | None:intergenic | 30.0% |
| AGACTCAATTAATGTTCGAA+AGG | - | chr7_3:82056451-82056470 | None:intergenic | 30.0% | |
| !!! | GGCAGACTTATCAATTTTTT+TGG | - | chr7_3:82056758-82056777 | None:intergenic | 30.0% |
| ! | ACTTTCTCTCTCTATTGTTT+TGG | + | chr7_3:82056815-82056834 | Msa1129990:intron | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr7_3:82056998-82057017 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr7_3:82056999-82057018 | Msa1129990:intron | 30.0% |
| AATTTGATTAAAGGAGTTGG+AGG | + | chr7_3:82057600-82057619 | Msa1129990:intron | 30.0% | |
| !! | GACAATTGTTTGTTGTAAGA+TGG | + | chr7_3:82057720-82057739 | Msa1129990:intron | 30.0% |
| ! | AAGAAAGTGTGGGAAAAAAT+AGG | + | chr7_3:82057840-82057859 | Msa1129990:intron | 30.0% |
| ! | AATGATAGAGATTTTGTTGC+TGG | - | chr7_3:82058119-82058138 | None:intergenic | 30.0% |
| TTGTCCAAGTAATGAAGAAA+GGG | - | chr7_3:82058515-82058534 | None:intergenic | 30.0% | |
| ATTGTCCAAGTAATGAAGAA+AGG | - | chr7_3:82058516-82058535 | None:intergenic | 30.0% | |
| ! | ATGCAACATTTTTGCATTTG+CGG | + | chr7_3:82058582-82058601 | Msa1129990:intron | 30.0% |
| GGGAAATAAAAAATTAGGTG+GGG | - | chr7_3:82058920-82058939 | None:intergenic | 30.0% | |
| GAGGGAAATAAAAAATTAGG+TGG | - | chr7_3:82058922-82058941 | None:intergenic | 30.0% | |
| GTGGAGGGAAATAAAAAATT+AGG | - | chr7_3:82058925-82058944 | None:intergenic | 30.0% | |
| ! | CCACAATCATTTGAAACAAA+CGG | - | chr7_3:82059114-82059133 | None:intergenic | 30.0% |
| CGTTTGTTTCAAATGATTGT+GGG | + | chr7_3:82059112-82059131 | Msa1129990:intron | 30.0% | |
| TAGAGAGGATAGAAAGTTTA+TGG | + | chr7_3:82059146-82059165 | Msa1129990:intron | 30.0% | |
| TATGGAAAACTTTCATTCCA+TGG | + | chr7_3:82059164-82059183 | Msa1129990:intron | 30.0% | |
| !! | GCTCTAAAATAAGGGTTATT+TGG | - | chr7_3:82059308-82059327 | None:intergenic | 30.0% |
| !! | GATGCAATGCTCTAAAATAA+GGG | - | chr7_3:82059316-82059335 | None:intergenic | 30.0% |
| !! | TGATGCAATGCTCTAAAATA+AGG | - | chr7_3:82059317-82059336 | None:intergenic | 30.0% |
| TAGAATGTGAGATGATTGTT+TGG | - | chr7_3:82059579-82059598 | None:intergenic | 30.0% | |
| GGAAGATCAAAGAAAGTAAT+AGG | - | chr7_3:82059640-82059659 | None:intergenic | 30.0% | |
| ! | TATTGTTCTTAGGGTTTGTT+TGG | - | chr7_3:82059661-82059680 | None:intergenic | 30.0% |
| CAACACCTTTCAAAAAATGT+AGG | - | chr7_3:82059938-82059957 | None:intergenic | 30.0% | |
| !!! | TTTTTGAAAGGTGTTGTTTC+TGG | + | chr7_3:82059942-82059961 | Msa1129990:intron | 30.0% |
| ATTGGCGCCTATATAAATAT+AGG | + | chr7_3:82059966-82059985 | Msa1129990:intron | 30.0% | |
| ATTGGCGCCTATATTTATAT+AGG | - | chr7_3:82059976-82059995 | None:intergenic | 30.0% | |
| CTATGACTTTCTTGTATAGA+TGG | - | chr7_3:82060043-82060062 | None:intergenic | 30.0% | |
| ATGAAGTAGCAGAAAAAGTA+AGG | - | chr7_3:82060195-82060214 | None:intergenic | 30.0% | |
| TCCTTGAAGCGAATTATATT+CGG | - | chr7_3:82060275-82060294 | None:intergenic | 30.0% | |
| ! | GTTGTTAACTGTTACTTCAA+TGG | + | chr7_3:82060361-82060380 | Msa1129990:intron | 30.0% |
| ! | TGTTAACTGTTACTTCAATG+GGG | + | chr7_3:82060363-82060382 | Msa1129990:intron | 30.0% |
| TACTATTGCTAAATGAGTAG+GGG | - | chr7_3:82060413-82060432 | None:intergenic | 30.0% | |
| TAGAACGAACTTAAAACTCA+AGG | + | chr7_3:82060830-82060849 | Msa1129990:intron | 30.0% | |
| ACATAATATTTGGATGGGAA+AGG | - | chr7_3:82060857-82060876 | None:intergenic | 30.0% | |
| GTAACGACATAATATTTGGA+TGG | - | chr7_3:82060863-82060882 | None:intergenic | 30.0% | |
| CCATGTAACGACATAATATT+TGG | - | chr7_3:82060867-82060886 | None:intergenic | 30.0% | |
| CCAAATATTATGTCGTTACA+TGG | + | chr7_3:82060864-82060883 | Msa1129990:CDS | 30.0% | |
| ! | ATAGGGATAATTAACTTGGA+AGG | + | chr7_3:82060980-82060999 | Msa1129990:intron | 30.0% |
| ! | GATAATTAACTTGGAAGGTT+AGG | + | chr7_3:82060985-82061004 | Msa1129990:intron | 30.0% |
| AGCGTCAAGAAAAATATTTC+TGG | - | chr7_3:82061075-82061094 | None:intergenic | 30.0% | |
| TCAGAATGATCTAGATAAAC+TGG | - | chr7_3:82061185-82061204 | None:intergenic | 30.0% | |
| !! | TATCACTTTTATGAGTAAGC+TGG | - | chr7_3:82061223-82061242 | None:intergenic | 30.0% |
| !! | AAGTGATAGTTCTAATAGAG+TGG | + | chr7_3:82061235-82061254 | Msa1129990:CDS | 30.0% |
| !! | GAATACCGTCATTTCAAGTT+CGG | + | chr7_3:82053822-82053841 | Msa1129990:CDS | 35.0% |
| ATCAACCGAACTTGAAATGA+CGG | - | chr7_3:82053830-82053849 | None:intergenic | 35.0% | |
| !! | GAGCACATATCTGAAACTTT+TGG | + | chr7_3:82053981-82054000 | Msa1129990:CDS | 35.0% |
| CAACGTTTATATGTTGGACT+AGG | + | chr7_3:82054079-82054098 | Msa1129990:intron | 35.0% | |
| TGAGTAATGATACTCCGTAT+TGG | + | chr7_3:82054119-82054138 | Msa1129990:CDS | 35.0% | |
| !! | AGAAGGTGTCAAATATAGCA+TGG | - | chr7_3:82054385-82054404 | None:intergenic | 35.0% |
| AATACCTCAAACTCATTGCA+CGG | - | chr7_3:82054795-82054814 | None:intergenic | 35.0% | |
| !! | AGAGGCATTTACTTGACAAA+AGG | + | chr7_3:82054831-82054850 | Msa1129990:intron | 35.0% |
| GCATTTACTTGACAAAAGGA+TGG | + | chr7_3:82054835-82054854 | Msa1129990:intron | 35.0% | |
| !!! | TGTTTTGAAAACTCGGTGTT+CGG | + | chr7_3:82055193-82055212 | Msa1129990:intron | 35.0% |
| AACGATTGGATTGAACACTT+TGG | - | chr7_3:82055235-82055254 | None:intergenic | 35.0% | |
| AAATTTGTGGGGTCAAGTAT+AGG | - | chr7_3:82055336-82055355 | None:intergenic | 35.0% | |
| CAAGACAAAGTGTGATAAGT+TGG | - | chr7_3:82055548-82055567 | None:intergenic | 35.0% | |
| TTAGGAAAAAGGCTAATAGG+AGG | + | chr7_3:82055802-82055821 | Msa1129990:intron | 35.0% | |
| TAGGAAAAAGGCTAATAGGA+GGG | + | chr7_3:82055803-82055822 | Msa1129990:intron | 35.0% | |
| ATGTCTAAATCAGACAATGC+CGG | - | chr7_3:82055984-82056003 | None:intergenic | 35.0% | |
| AGAGAGAGAAAGTAAGAACA+GGG | - | chr7_3:82056808-82056827 | None:intergenic | 35.0% | |
| TAGAGAGAGAAAGTAAGAAC+AGG | - | chr7_3:82056809-82056828 | None:intergenic | 35.0% | |
| ! | GTTGTGTGCAGAGTATTAAT+TGG | + | chr7_3:82057129-82057148 | Msa1129990:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | chr7_3:82057133-82057152 | Msa1129990:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr7_3:82057234-82057253 | Msa1129990:intron | 35.0% |
| AACGTTGTTACCTATACTGA+TGG | + | chr7_3:82057404-82057423 | Msa1129990:intron | 35.0% | |
| ATTCATGGAACCATCAGTAT+AGG | - | chr7_3:82057417-82057436 | None:intergenic | 35.0% | |
| AGAGTGAAAGATAACTGACA+CGG | + | chr7_3:82057557-82057576 | Msa1129990:intron | 35.0% | |
| TAGGAAAAAGGCTAATAGGA+GGG | - | chr7_3:82055803-82055822 | None:intergenic | 35.0% | |
| AAGGTAGGAAAAAGGCTAAT+AGG | - | chr7_3:82058167-82058186 | None:intergenic | 35.0% | |
| AAACAGAGTGACATACATAC+TGG | - | chr7_3:82058246-82058265 | None:intergenic | 35.0% | |
| ! | CTAGTGAAACATGTTGATGA+TGG | + | chr7_3:82058415-82058434 | Msa1129990:intron | 35.0% |
| CCATATCACAACGACATAAA+TGG | - | chr7_3:82058700-82058719 | None:intergenic | 35.0% | |
| CCATTTATGTCGTTGTGATA+TGG | + | chr7_3:82058697-82058716 | Msa1129990:intron | 35.0% | |
| ! | AGGTAGACTAAATTTGCTTG+AGG | - | chr7_3:82058863-82058882 | None:intergenic | 35.0% |
| ! | CGTTTAAAATTAAGGGGTAG+AGG | - | chr7_3:82058883-82058902 | None:intergenic | 35.0% |
| TCACGAAAACACATCTCTTA+GGG | + | chr7_3:82059087-82059106 | Msa1129990:intron | 35.0% | |
| CCGTTTGTTTCAAATGATTG+TGG | + | chr7_3:82059111-82059130 | Msa1129990:intron | 35.0% | |
| TTGTTTCAAATGATTGTGGG+AGG | + | chr7_3:82059115-82059134 | Msa1129990:intron | 35.0% | |
| CTCACATTCAAACTAAACCA+TGG | - | chr7_3:82059184-82059203 | None:intergenic | 35.0% | |
| !! | GTTTAGTTTGAATGTGAGAG+AGG | + | chr7_3:82059186-82059205 | Msa1129990:intron | 35.0% |
| !! | GAAAGAAAGTGCACTTTTTG+TGG | + | chr7_3:82059208-82059227 | Msa1129990:intron | 35.0% |
| ACCAGATTGAGAAGAAAGTT+AGG | + | chr7_3:82059256-82059275 | Msa1129990:intron | 35.0% | |
| TCCTAACTTTCTTCTCAATC+TGG | - | chr7_3:82059260-82059279 | None:intergenic | 35.0% | |
| GAAAGTGAGAAGAAAGTGAA+AGG | - | chr7_3:82059541-82059560 | None:intergenic | 35.0% | |
| GAGATGATTGTTTGGTTGTT+TGG | - | chr7_3:82059571-82059590 | None:intergenic | 35.0% | |
| TCACGAGTCTATTGTTCTTA+GGG | - | chr7_3:82059670-82059689 | None:intergenic | 35.0% | |
| !! | AAAGGTGTTGTTTCTGGTAT+TGG | + | chr7_3:82059948-82059967 | Msa1129990:intron | 35.0% |
| CTGCAGAACTACTAATGTAT+TGG | - | chr7_3:82059994-82060013 | None:intergenic | 35.0% | |
| GACTTTCTTGTATAGATGGT+TGG | - | chr7_3:82060039-82060058 | None:intergenic | 35.0% | |
| AGAACAAGAGATAACTTTGG+TGG | + | chr7_3:82060067-82060086 | Msa1129990:intron | 35.0% | |
| TTTCCAGATTGATGAGAATG+TGG | + | chr7_3:82060214-82060233 | Msa1129990:intron | 35.0% | |
| CCTTGAAGCGAATTATATTC+GGG | - | chr7_3:82060274-82060293 | None:intergenic | 35.0% | |
| GAATATAATTCGCTTCAAGG+AGG | + | chr7_3:82060274-82060293 | Msa1129990:CDS | 35.0% | |
| !! | TACTTCAATGGGGTTTTGAT+TGG | + | chr7_3:82060373-82060392 | Msa1129990:intron | 35.0% |
| AAATTGACTGCAATGACAGT+AGG | + | chr7_3:82060616-82060635 | Msa1129990:intron | 35.0% | |
| CAGTAGGTAATTCTTACCAT+AGG | + | chr7_3:82060632-82060651 | Msa1129990:intron | 35.0% | |
| GTATGTGTCCAATGAAATTG+TGG | + | chr7_3:82060929-82060948 | Msa1129990:intron | 35.0% | |
| GTGATCAACCACAATTTCAT+TGG | - | chr7_3:82060940-82060959 | None:intergenic | 35.0% | |
| !!! | AAGATGTTTTAGTGCTCTAG+TGG | - | chr7_3:82061030-82061049 | None:intergenic | 35.0% |
| !! | TGATAGTTCTAATAGAGTGG+AGG | + | chr7_3:82061238-82061257 | Msa1129990:CDS | 35.0% |
| !! | TTTCAGGAAAGCGTAGATTT+TGG | + | chr7_3:82061270-82061289 | Msa1129990:CDS | 35.0% |
| ! | TCGGTTGATATAGAACTAGC+TGG | + | chr7_3:82053841-82053860 | Msa1129990:CDS | 40.0% |
| CTCTCAACAACAAATGCAAG+AGG | - | chr7_3:82053964-82053983 | None:intergenic | 40.0% | |
| CTATCCAAGTTGCTCCAATA+CGG | - | chr7_3:82054136-82054155 | None:intergenic | 40.0% | |
| ATACCTCAAACTCATTGCAC+GGG | - | chr7_3:82054794-82054813 | None:intergenic | 40.0% | |
| ! | GTGCAATGAGTTTGAGGTAT+TGG | + | chr7_3:82054794-82054813 | Msa1129990:intron | 40.0% |
| !! | AGTTTGAGGTATTGGTGAAG+AGG | + | chr7_3:82054802-82054821 | Msa1129990:intron | 40.0% |
| TTGGTGAAGAGGAACAATAG+AGG | + | chr7_3:82054813-82054832 | Msa1129990:intron | 40.0% | |
| ! | CGTTCGAAGTACTATTAACG+CGG | - | chr7_3:82054931-82054950 | None:intergenic | 40.0% |
| TAGAATGTATATGACCCGTG+CGG | + | chr7_3:82055082-82055101 | Msa1129990:intron | 40.0% | |
| TAAGAGTTTGCACTTCCACT+AGG | + | chr7_3:82055140-82055159 | Msa1129990:intron | 40.0% | |
| ! | ACTTCAAGTTCAATGCCTAG+TGG | - | chr7_3:82055158-82055177 | None:intergenic | 40.0% |
| CACTTTGTCTTGCAACTAGA+CGG | + | chr7_3:82055556-82055575 | Msa1129990:intron | 40.0% | |
| GTGCAACATTGCACATGTTA+AGG | + | chr7_3:82056538-82056557 | Msa1129990:intron | 40.0% | |
| GAGAGAGAAAGTAAGAACAG+GGG | - | chr7_3:82056807-82056826 | None:intergenic | 40.0% | |
| ! | GTTGTCAAAGTGAAAGTGTG+TGG | - | chr7_3:82056952-82056971 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr7_3:82057238-82057257 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | chr7_3:82057132-82057151 | Msa1129990:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr7_3:82057238-82057257 | Msa1129990:intron | 40.0% |
| GTAGGAAAAAGGCTAATAGG+AGG | - | chr7_3:82058164-82058183 | None:intergenic | 40.0% | |
| CATGTTTCACTAGTCCACTT+GGG | - | chr7_3:82058408-82058427 | None:intergenic | 40.0% | |
| ACATGTTTCACTAGTCCACT+TGG | - | chr7_3:82058409-82058428 | None:intergenic | 40.0% | |
| TGCACCCTTTCTTCATTACT+TGG | + | chr7_3:82058508-82058527 | Msa1129990:intron | 40.0% | |
| TGCAAAAATGTTGCATTGCG+CGG | - | chr7_3:82058578-82058597 | None:intergenic | 40.0% | |
| ! | TGTCGTTGTGATATGGATTG+TGG | + | chr7_3:82058704-82058723 | Msa1129990:intron | 40.0% |
| TCGCCATATTATGTGTGTGT+GGG | - | chr7_3:82058973-82058992 | None:intergenic | 40.0% | |
| CTCACGAAAACACATCTCTT+AGG | + | chr7_3:82059086-82059105 | Msa1129990:intron | 40.0% | |
| CACGAAAACACATCTCTTAG+GGG | + | chr7_3:82059088-82059107 | Msa1129990:intron | 40.0% | |
| ACTTTCTTCTCAATCTGGTG+CGG | - | chr7_3:82059255-82059274 | None:intergenic | 40.0% | |
| CTCACGAGTCTATTGTTCTT+AGG | - | chr7_3:82059671-82059690 | None:intergenic | 40.0% | |
| CTAAGAACAATAGACTCGTG+AGG | + | chr7_3:82059669-82059688 | Msa1129990:intron | 40.0% | |
| TAGCCACATTCTCATCAATC+TGG | - | chr7_3:82060220-82060239 | None:intergenic | 40.0% | |
| CTAGAGAGATTATCAACCAC+AGG | + | chr7_3:82060237-82060256 | Msa1129990:CDS | 40.0% | |
| TTATCAACCACAGGTCTCTT+CGG | + | chr7_3:82060246-82060265 | Msa1129990:CDS | 40.0% | |
| CCCGAATATAATTCGCTTCA+AGG | + | chr7_3:82060271-82060290 | Msa1129990:CDS | 40.0% | |
| TAATTCGCTTCAAGGAGGTA+AGG | + | chr7_3:82060279-82060298 | Msa1129990:intron | 40.0% | |
| !! | TTATACTGCAAGAAGGTGCT+AGG | - | chr7_3:82060459-82060478 | None:intergenic | 40.0% |
| ACTCTGCTTATACTGCAAGA+AGG | - | chr7_3:82060466-82060485 | None:intergenic | 40.0% | |
| ATGAGTCGTTGTATAGAGAC+TGG | - | chr7_3:82060594-82060613 | None:intergenic | 40.0% | |
| AGTGCAATTCGAGTATCATC+AGG | - | chr7_3:82060767-82060786 | None:intergenic | 40.0% | |
| ATTGTGGTTGATCACCTTCA+TGG | + | chr7_3:82060945-82060964 | Msa1129990:intron | 40.0% | |
| ATATTGCTTTGTCGCCATGA+AGG | - | chr7_3:82060962-82060981 | None:intergenic | 40.0% | |
| TCATGGCGACAAAGCAATAT+AGG | + | chr7_3:82060962-82060981 | Msa1129990:intron | 40.0% | |
| CATGGCGACAAAGCAATATA+GGG | + | chr7_3:82060963-82060982 | Msa1129990:intron | 40.0% | |
| GGTTAGGATGAATATTGCAG+TGG | + | chr7_3:82061001-82061020 | Msa1129990:intron | 40.0% | |
| ! | GCTGACTTTCATGCAAAAGT+AGG | + | chr7_3:82061092-82061111 | Msa1129990:CDS | 40.0% |
| GATCAAAGCCATATTCGAAC+AGG | + | chr7_3:82061146-82061165 | Msa1129990:CDS | 40.0% | |
| ATATTCGAACAGGTGCACAA+GGG | + | chr7_3:82061156-82061175 | Msa1129990:CDS | 40.0% | |
| CTAATAGAGTGGAGGCAATT+AGG | + | chr7_3:82061246-82061265 | Msa1129990:CDS | 40.0% | |
| !! | AGGAAAGCGTAGATTTTGGA+GGG | + | chr7_3:82061274-82061293 | Msa1129990:CDS | 40.0% |
| TACTCCGTATTGGAGCAACT+TGG | + | chr7_3:82054129-82054148 | Msa1129990:CDS | 45.0% | |
| CTTACGTCACTTACGTCAGA+AGG | - | chr7_3:82054402-82054421 | None:intergenic | 45.0% | |
| GGGTCTTGCAAGTAAACGAT+TGG | - | chr7_3:82055249-82055268 | None:intergenic | 45.0% | |
| CGAAAGGAAGAAAGAGCAGA+AGG | - | chr7_3:82056435-82056454 | None:intergenic | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr7_3:82057237-82057256 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr7_3:82057237-82057256 | Msa1129990:intron | 45.0% |
| AACACCAAATTACGCACGGT+TGG | - | chr7_3:82058464-82058483 | None:intergenic | 45.0% | |
| ACGGAACACCAAATTACGCA+CGG | - | chr7_3:82058468-82058487 | None:intergenic | 45.0% | |
| ! | GATATGGATTGTGGATGCTG+CGG | + | chr7_3:82058713-82058732 | Msa1129990:intron | 45.0% |
| CTCGCCATATTATGTGTGTG+TGG | - | chr7_3:82058974-82058993 | None:intergenic | 45.0% | |
| ! | TGGGAGGATTGATAGTAGAG+AGG | + | chr7_3:82059131-82059150 | Msa1129990:intron | 45.0% |
| !! | CGGAAAGTTTTCAAGGGATG+GGG | - | chr7_3:82059235-82059254 | None:intergenic | 45.0% |
| !! | GCGGAAAGTTTTCAAGGGAT+GGG | - | chr7_3:82059236-82059255 | None:intergenic | 45.0% |
| !! | TGCGGAAAGTTTTCAAGGGA+TGG | - | chr7_3:82059237-82059256 | None:intergenic | 45.0% |
| ! | CTGGTGCGGAAAGTTTTCAA+GGG | - | chr7_3:82059241-82059260 | None:intergenic | 45.0% |
| ! | TCTGGTGCGGAAAGTTTTCA+AGG | - | chr7_3:82059242-82059261 | None:intergenic | 45.0% |
| GCTTTCACAACTAACAGCTG+CGG | + | chr7_3:82059812-82059831 | Msa1129990:intron | 45.0% | |
| CTTTCACAACTAACAGCTGC+GGG | + | chr7_3:82059813-82059832 | Msa1129990:intron | 45.0% | |
| !!! | CAATGGGGTTTTGATTGGTC+AGG | + | chr7_3:82060378-82060397 | Msa1129990:intron | 45.0% |
| ! | ACGACTCACATCAGGACTTT+TGG | - | chr7_3:82060571-82060590 | None:intergenic | 45.0% |
| CTTGTGCACCTGTTCGAATA+TGG | - | chr7_3:82061157-82061176 | None:intergenic | 45.0% | |
| CATATTCGAACAGGTGCACA+AGG | + | chr7_3:82061155-82061174 | Msa1129990:CDS | 45.0% | |
| ! | GTGGAGGCAATTAGGTTTTC+AGG | + | chr7_3:82061254-82061273 | Msa1129990:CDS | 45.0% |
| !! | CAGGAAAGCGTAGATTTTGG+AGG | + | chr7_3:82061273-82061292 | Msa1129990:CDS | 45.0% |
| !! | TTCATAATTTATAATAAAAT+AGG | + | chr7_3:82054667-82054686 | Msa1129990:intron | 5.0% |
| !! | AAATATACATATATATATAA+TGG | - | chr7_3:82055680-82055699 | None:intergenic | 5.0% |
| !! | TATATGTATATTTAATTAAA+CGG | + | chr7_3:82055687-82055706 | Msa1129990:intron | 5.0% |
| TGACGGTCGCTTAGACATGT+TGG | + | chr7_3:82054494-82054513 | Msa1129990:intron | 50.0% | |
| !! | GAAAACTCGGTGTTCGGTCT+AGG | + | chr7_3:82055199-82055218 | Msa1129990:intron | 50.0% |
| AGACCTAAGAAGGTCCCGTA+CGG | - | chr7_3:82058373-82058392 | None:intergenic | 50.0% | |
| GGACCTTCTTAGGTCTCTCA+CGG | + | chr7_3:82055595-82055614 | Msa1129990:intron | 50.0% | |
| CTACCGTGAGAGACCTAAGA+AGG | - | chr7_3:82058363-82058382 | None:intergenic | 50.0% | |
| CTTCTTAGGTCTCTCACGGT+AGG | + | chr7_3:82055599-82055618 | Msa1129990:intron | 50.0% | |
| !! | AAACGGTGCTGGTTGAAAGC+AGG | + | chr7_3:82055704-82055723 | Msa1129990:intron | 50.0% |
| !! | AACGGTGCTGGTTGAAAGCA+GGG | + | chr7_3:82055705-82055724 | Msa1129990:intron | 50.0% |
| AAGCAGGGTGACACACATAC+TGG | + | chr7_3:82055720-82055739 | Msa1129990:intron | 50.0% | |
| ACTGACACGGCGTGAATCAA+AGG | + | chr7_3:82057570-82057589 | Msa1129990:intron | 50.0% | |
| CTTCTTAGGTCTCTCACGGT+AGG | - | chr7_3:82055599-82055618 | None:intergenic | 50.0% | |
| CTACCGTGAGAGACCTAAGA+AGG | + | chr7_3:82058363-82058382 | Msa1129990:intron | 50.0% | |
| GGACCTTCTTAGGTCTCTCA+CGG | - | chr7_3:82055595-82055614 | None:intergenic | 50.0% | |
| AGACCTAAGAAGGTCCCGTA+CGG | + | chr7_3:82058373-82058392 | Msa1129990:intron | 50.0% | |
| GCGCCCACACACACATAATA+TGG | + | chr7_3:82058967-82058986 | Msa1129990:intron | 50.0% | |
| !!! | TGGGGTTTTGATTGGTCAGG+TGG | + | chr7_3:82060381-82060400 | Msa1129990:intron | 50.0% |
| CGACCCGTGCAATGAGTTTG+AGG | + | chr7_3:82054788-82054807 | Msa1129990:intron | 55.0% | |
| ATATGACCCGTGCGGCAACA+CGG | + | chr7_3:82055090-82055109 | Msa1129990:intron | 55.0% | |
| GACCTAAGAAGGTCCCGTAC+GGG | - | chr7_3:82058374-82058393 | None:intergenic | 55.0% | |
| TAGGTCTCTCACGGTAGGAG+AGG | + | chr7_3:82055604-82055623 | Msa1129990:intron | 55.0% | |
| TAGGTCTCTCACGGTAGGAG+AGG | - | chr7_3:82055604-82055623 | None:intergenic | 55.0% | |
| GACCTAAGAAGGTCCCGTAC+GGG | + | chr7_3:82058374-82058393 | Msa1129990:intron | 55.0% | |
| GGTGCCAACCGTGCGTAATT+TGG | + | chr7_3:82058457-82058476 | Msa1129990:intron | 55.0% | |
| TGCGCGTGTGTGTTAGTGGA+GGG | - | chr7_3:82058940-82058959 | None:intergenic | 55.0% | |
| AACTAACAGCTGCGGGAGCA+AGG | + | chr7_3:82059820-82059839 | Msa1129990:intron | 55.0% | |
| GAGACTGGACGACTCACATC+AGG | - | chr7_3:82060579-82060598 | None:intergenic | 55.0% | |
| TTACATGGGTGCACCTCACG+TGG | + | chr7_3:82060879-82060898 | Msa1129990:CDS | 55.0% | |
| GTAACTGCGACTTCCACGTG+AGG | - | chr7_3:82060895-82060914 | None:intergenic | 55.0% | |
| TATGACCCGTGCGGCAACAC+GGG | + | chr7_3:82055091-82055110 | Msa1129990:intron | 60.0% | |
| TTTCCACCCGTGTTGCCGCA+CGG | - | chr7_3:82055100-82055119 | None:intergenic | 60.0% | |
| !! | AGACGGTGCTGTCTCCCGTA+CGG | + | chr7_3:82055573-82055592 | Msa1129990:intron | 60.0% |
| CTCCCGTACGGGACCTTCTT+AGG | + | chr7_3:82055585-82055604 | Msa1129990:intron | 60.0% | |
| CTCCCGTACGGGACCTTCTT+AGG | - | chr7_3:82055585-82055604 | None:intergenic | 60.0% | |
| ! | TTGGGTGCTGTCTCCCGTAC+GGG | - | chr7_3:82058390-82058409 | None:intergenic | 60.0% |
| ! | CTTGGGTGCTGTCTCCCGTA+CGG | - | chr7_3:82058391-82058410 | None:intergenic | 60.0% |
| TACGGGAGACAGCACCCAAG+TGG | + | chr7_3:82058391-82058410 | Msa1129990:intron | 60.0% | |
| CGCGGATGCACTTGCAGTTG+TGG | + | chr7_3:82058674-82058693 | Msa1129990:intron | 60.0% | |
| GTGCGCGTGTGTGTTAGTGG+AGG | - | chr7_3:82058941-82058960 | None:intergenic | 60.0% | |
| CGTGTGCGCGTGTGTGTTAG+TGG | - | chr7_3:82058944-82058963 | None:intergenic | 60.0% | |
| TTCCACCCGTGTTGCCGCAC+GGG | - | chr7_3:82055099-82055118 | None:intergenic | 65.0% | |
| !! | GACGGTGCTGTCTCCCGTAC+GGG | + | chr7_3:82055574-82055593 | Msa1129990:intron | 65.0% |
| !! | TCGGGTGCCGAAGAGACCTG+TGG | - | chr7_3:82060256-82060275 | None:intergenic | 65.0% |
| GACCCGTGCGGCAACACGGG+TGG | + | chr7_3:82055094-82055113 | Msa1129990:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 82053820 | 82061301 | 82053820 | ID=Msa1129990;Name=Msa1129990 |
| chr7_3 | mRNA | 82053820 | 82061301 | 82053820 | ID=Msa1129990-mRNA-1;Parent=Msa1129990;Name=Msa1129990-mRNA-1;_AED=0.45;_eAED=0.55;_QI=0|0|0|0.6|1|1|5|0|247 |
| chr7_3 | exon | 82053820 | 82054021 | 82053820 | ID=Msa1129990-mRNA-1:exon:23997;Parent=Msa1129990-mRNA-1 |
| chr7_3 | exon | 82054101 | 82054171 | 82054101 | ID=Msa1129990-mRNA-1:exon:23998;Parent=Msa1129990-mRNA-1 |
| chr7_3 | exon | 82060221 | 82060295 | 82060221 | ID=Msa1129990-mRNA-1:exon:23999;Parent=Msa1129990-mRNA-1 |
| chr7_3 | exon | 82060833 | 82060928 | 82060833 | ID=Msa1129990-mRNA-1:exon:24000;Parent=Msa1129990-mRNA-1 |
| chr7_3 | exon | 82061002 | 82061301 | 82061002 | ID=Msa1129990-mRNA-1:exon:24001;Parent=Msa1129990-mRNA-1 |
| chr7_3 | CDS | 82053820 | 82054021 | 82053820 | ID=Msa1129990-mRNA-1:cds;Parent=Msa1129990-mRNA-1 |
| chr7_3 | CDS | 82054101 | 82054171 | 82054101 | ID=Msa1129990-mRNA-1:cds;Parent=Msa1129990-mRNA-1 |
| chr7_3 | CDS | 82060221 | 82060295 | 82060221 | ID=Msa1129990-mRNA-1:cds;Parent=Msa1129990-mRNA-1 |
| chr7_3 | CDS | 82060833 | 82060928 | 82060833 | ID=Msa1129990-mRNA-1:cds;Parent=Msa1129990-mRNA-1 |
| chr7_3 | CDS | 82061002 | 82061301 | 82061002 | ID=Msa1129990-mRNA-1:cds;Parent=Msa1129990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
