Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1131100 | XP_039689701.1 | 83.748 | 523 | 47 | 2 | 65 | 554 | 3 | 520 | 0.0 | 904 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1131100 | sp|F4IXE7|IDM1_ARATH | 32.697 | 419 | 244 | 14 | 143 | 537 | 619 | 1023 | 1.78e-57 | 211 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1131100 | A0A072UPL4 | 82.792 | 523 | 47 | 3 | 65 | 554 | 3 | 515 | 0.0 | 888 |
Gene ID | Type | Classification |
---|---|---|
Msa1131100 | TR | PHD |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1131100 | MtrunA17_Chr4g0055731 | 77.247 | 523 | 47 | 4 | 65 | 554 | 3 | 486 | 0.0 | 813 |
Msa1131100 | MtrunA17_Chr1g0205451 | 33.705 | 448 | 250 | 14 | 142 | 554 | 603 | 1038 | 6.48e-66 | 233 |
Msa1131100 | MtrunA17_Chr1g0185491 | 32.783 | 424 | 245 | 11 | 142 | 537 | 809 | 1220 | 5.68e-62 | 221 |
Msa1131100 | MtrunA17_Chr2g0316251 | 30.588 | 425 | 257 | 13 | 139 | 537 | 754 | 1166 | 2.37e-53 | 196 |
Msa1131100 | MtrunA17_Chr5g0430361 | 28.289 | 456 | 281 | 17 | 111 | 537 | 619 | 1057 | 1.04e-47 | 179 |
Msa1131100 | MtrunA17_Chr3g0105291 | 26.667 | 450 | 283 | 15 | 122 | 544 | 585 | 1014 | 1.50e-45 | 172 |
Msa1131100 | MtrunA17_Chr7g0270101 | 28.894 | 398 | 233 | 11 | 144 | 510 | 383 | 761 | 7.39e-42 | 160 |
Msa1131100 | MtrunA17_Chr5g0407251 | 26.932 | 427 | 268 | 11 | 145 | 537 | 3 | 419 | 4.06e-40 | 150 |
Msa1131100 | MtrunA17_Chr5g0407211 | 26.698 | 427 | 269 | 11 | 145 | 537 | 3 | 419 | 2.98e-39 | 148 |
Msa1131100 | MtrunA17_Chr3g0134821 | 23.368 | 475 | 298 | 14 | 105 | 537 | 382 | 832 | 5.09e-32 | 131 |
Msa1131100 | MtrunA17_Chr3g0134811 | 28.076 | 317 | 196 | 9 | 239 | 537 | 489 | 791 | 8.23e-32 | 130 |
Msa1131100 | MtrunA17_Chr7g0259981 | 28.431 | 306 | 198 | 8 | 250 | 551 | 17 | 305 | 9.09e-31 | 122 |
Msa1131100 | MtrunA17_Chr1g0182481 | 24.263 | 441 | 237 | 15 | 155 | 527 | 472 | 883 | 2.44e-28 | 120 |
Msa1131100 | MtrunA17_Chr1g0179841 | 24.017 | 458 | 252 | 13 | 155 | 535 | 362 | 800 | 1.32e-27 | 117 |
Msa1131100 | MtrunA17_Chr3g0134851 | 27.877 | 391 | 215 | 11 | 172 | 537 | 116 | 464 | 1.68e-26 | 112 |
Msa1131100 | MtrunA17_Chr7g0265211 | 22.727 | 440 | 239 | 15 | 155 | 515 | 507 | 924 | 2.45e-26 | 114 |
Msa1131100 | MtrunA17_Chr2g0320451 | 25.714 | 175 | 125 | 2 | 364 | 535 | 849 | 1021 | 2.17e-17 | 86.3 |
Msa1131100 | MtrunA17_Chr4g0025251 | 25.385 | 260 | 161 | 8 | 307 | 538 | 448 | 702 | 7.03e-17 | 84.3 |
Msa1131100 | MtrunA17_Chr4g0028111 | 21.376 | 407 | 215 | 13 | 185 | 511 | 181 | 562 | 1.53e-15 | 79.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1131100 | AT4G14920.3 | 35.154 | 421 | 236 | 11 | 142 | 538 | 577 | 984 | 7.97e-69 | 241 |
Msa1131100 | AT4G14920.2 | 35.154 | 421 | 236 | 11 | 142 | 538 | 577 | 984 | 8.01e-69 | 241 |
Msa1131100 | AT4G14920.1 | 35.154 | 421 | 236 | 11 | 142 | 538 | 577 | 984 | 8.01e-69 | 241 |
Msa1131100 | AT5G36740.5 | 33.787 | 441 | 257 | 11 | 124 | 538 | 519 | 950 | 1.17e-67 | 238 |
Msa1131100 | AT5G36740.1 | 33.787 | 441 | 257 | 11 | 124 | 538 | 519 | 950 | 1.17e-67 | 238 |
Msa1131100 | AT1G05380.3 | 33.256 | 430 | 242 | 12 | 142 | 542 | 517 | 930 | 4.84e-67 | 236 |
Msa1131100 | AT1G05380.1 | 33.256 | 430 | 242 | 12 | 142 | 542 | 517 | 930 | 4.84e-67 | 236 |
Msa1131100 | AT1G05380.2 | 33.256 | 430 | 242 | 12 | 142 | 542 | 517 | 930 | 4.84e-67 | 236 |
Msa1131100 | AT5G36740.4 | 33.879 | 428 | 243 | 11 | 142 | 538 | 389 | 807 | 5.36e-67 | 235 |
Msa1131100 | AT3G14980.5 | 32.697 | 419 | 244 | 14 | 143 | 537 | 574 | 978 | 1.56e-58 | 211 |
Msa1131100 | AT3G14980.6 | 32.697 | 419 | 244 | 14 | 143 | 537 | 619 | 1023 | 1.81e-58 | 211 |
Msa1131100 | AT3G14980.1 | 32.697 | 419 | 244 | 14 | 143 | 537 | 619 | 1023 | 1.81e-58 | 211 |
Msa1131100 | AT3G14980.2 | 32.697 | 419 | 244 | 14 | 143 | 537 | 619 | 1023 | 1.81e-58 | 211 |
Msa1131100 | AT3G14980.3 | 32.697 | 419 | 244 | 14 | 143 | 537 | 619 | 1023 | 3.45e-58 | 210 |
Msa1131100 | AT5G36670.4 | 31.510 | 457 | 260 | 13 | 124 | 538 | 519 | 964 | 2.24e-57 | 208 |
Msa1131100 | AT5G36670.5 | 31.510 | 457 | 260 | 13 | 124 | 538 | 519 | 964 | 2.24e-57 | 208 |
Msa1131100 | AT5G36670.3 | 31.049 | 467 | 259 | 14 | 124 | 538 | 366 | 821 | 2.15e-56 | 204 |
Msa1131100 | AT5G36670.1 | 31.049 | 467 | 259 | 14 | 124 | 538 | 519 | 974 | 4.63e-56 | 204 |
Msa1131100 | AT5G36670.2 | 32.723 | 382 | 223 | 10 | 124 | 479 | 519 | 892 | 2.21e-51 | 189 |
Msa1131100 | AT5G36740.2 | 32.723 | 382 | 223 | 10 | 124 | 479 | 519 | 892 | 2.21e-51 | 189 |
Msa1131100 | AT5G36740.3 | 32.723 | 382 | 223 | 10 | 124 | 479 | 519 | 892 | 2.21e-51 | 189 |
Msa1131100 | AT5G58610.4 | 27.778 | 432 | 265 | 14 | 139 | 538 | 362 | 778 | 8.74e-41 | 158 |
Msa1131100 | AT5G58610.7 | 27.778 | 432 | 265 | 14 | 139 | 538 | 584 | 1000 | 1.42e-40 | 158 |
Msa1131100 | AT5G58610.3 | 27.778 | 432 | 265 | 14 | 139 | 538 | 593 | 1009 | 1.68e-40 | 157 |
Msa1131100 | AT5G58610.8 | 27.778 | 432 | 265 | 14 | 139 | 538 | 593 | 1009 | 1.73e-40 | 157 |
Msa1131100 | AT5G58610.2 | 27.778 | 432 | 265 | 14 | 139 | 538 | 593 | 1009 | 1.73e-40 | 157 |
Msa1131100 | AT5G58610.5 | 27.778 | 432 | 265 | 14 | 139 | 538 | 584 | 1000 | 2.05e-40 | 157 |
Msa1131100 | AT5G58610.1 | 26.303 | 422 | 258 | 13 | 139 | 538 | 584 | 974 | 1.48e-37 | 149 |
Msa1131100 | AT5G58610.6 | 26.303 | 422 | 258 | 13 | 139 | 538 | 584 | 974 | 2.25e-37 | 148 |
Msa1131100 | AT3G14980.4 | 31.307 | 329 | 189 | 13 | 143 | 447 | 619 | 934 | 4.28e-35 | 141 |
Msa1131100 | AT5G58610.10 | 27.513 | 378 | 228 | 13 | 139 | 484 | 593 | 956 | 4.17e-32 | 132 |
Msa1131100 | AT2G37520.1 | 23.736 | 455 | 250 | 15 | 155 | 537 | 386 | 815 | 5.15e-32 | 132 |
Msa1131100 | AT5G58610.9 | 27.513 | 378 | 228 | 13 | 139 | 484 | 584 | 947 | 7.94e-32 | 131 |
Msa1131100 | AT3G53680.1 | 24.390 | 451 | 251 | 16 | 155 | 537 | 403 | 831 | 2.10e-31 | 130 |
Msa1131100 | AT3G53680.2 | 24.390 | 451 | 251 | 16 | 155 | 537 | 405 | 833 | 2.26e-31 | 129 |
Msa1131100 | AT2G27980.1 | 24.731 | 465 | 248 | 16 | 155 | 537 | 613 | 1057 | 4.22e-30 | 126 |
Msa1131100 | AT2G36720.1 | 24.078 | 461 | 248 | 16 | 155 | 535 | 533 | 971 | 5.23e-29 | 122 |
Msa1131100 | AT2G36720.2 | 24.078 | 461 | 248 | 16 | 155 | 535 | 533 | 971 | 5.23e-29 | 122 |
Msa1131100 | AT5G58610.11 | 26.765 | 340 | 203 | 13 | 139 | 446 | 584 | 909 | 1.44e-23 | 105 |
Msa1131100 | AT5G63900.1 | 25.763 | 295 | 204 | 8 | 246 | 537 | 258 | 540 | 7.43e-22 | 99.8 |
Find 119 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTCCCATTGATATTATTT+TGG | 0.141230 | 7_3:+83518728 | None:intergenic |
ACGAATTTGCCATTTGTTAA+TGG | 0.158481 | 7_3:-83517854 | Msa1131100:CDS |
TCACTTATTTCCACATAATT+TGG | 0.186213 | 7_3:+83520067 | None:intergenic |
TCCCAGAAATTACCTATTTC+AGG | 0.195115 | 7_3:+83519947 | None:intergenic |
GACCTGAAATAGGTAATTTC+TGG | 0.234540 | 7_3:-83519949 | Msa1131100:CDS |
CTTTCAACCATTTACTAATC+AGG | 0.274878 | 7_3:+83519438 | None:intergenic |
ATTTACTAATCAGGATGTTT+TGG | 0.283205 | 7_3:+83519447 | None:intergenic |
AAACTGTGAAAGATTTATTA+AGG | 0.284878 | 7_3:-83518901 | Msa1131100:CDS |
TTGAAAATTCGACCGGTTAT+CGG | 0.303297 | 7_3:+83519593 | None:intergenic |
AAAACATCCTGATTAGTAAA+TGG | 0.312020 | 7_3:-83519445 | Msa1131100:CDS |
TCCGGATTAATACTCGTTTC+CGG | 0.320410 | 7_3:+83519851 | None:intergenic |
TCAACAGTTTGTGGATTAGA+TGG | 0.321798 | 7_3:+83517462 | None:intergenic |
TGCTTCTAATTGACAGTATT+AGG | 0.322640 | 7_3:+83517288 | None:intergenic |
CCTTGACTCTACAGATTTCA+TGG | 0.325979 | 7_3:-83517931 | Msa1131100:intron |
TGGACTTGAATGAGCCATTC+GGG | 0.345809 | 7_3:-83517320 | Msa1131100:CDS |
TCCATTGGCAAACTTTGTTC+CGG | 0.346997 | 7_3:+83519833 | None:intergenic |
TTGAAGGGTTAGAAGCAAAC+TGG | 0.364828 | 7_3:-83520018 | Msa1131100:CDS |
CTTGTTTCGTTCATTGATGA+TGG | 0.366832 | 7_3:+83519803 | None:intergenic |
AAATTACCTATTTCAGGTCT+TGG | 0.368746 | 7_3:+83519953 | None:intergenic |
CGTAGACCAAGACCTGAAAT+AGG | 0.369525 | 7_3:-83519959 | Msa1131100:CDS |
TAAACAAACAATGTCATGTA+TGG | 0.389738 | 7_3:+83519376 | None:intergenic |
GCATACCTCTTTACAACTTA+CGG | 0.394078 | 7_3:+83518868 | None:intergenic |
TGCAGCTGCTTGCATGTTGA+TGG | 0.397741 | 7_3:-83518629 | Msa1131100:CDS |
GCAACCATACAAACGCATTT+CGG | 0.399165 | 7_3:-83519492 | Msa1131100:CDS |
GTTTGTTTAGTTTGTGGAAA+AGG | 0.400119 | 7_3:-83519362 | Msa1131100:CDS |
TGAAATAGCTACCATTGTTC+CGG | 0.403012 | 7_3:-83519870 | Msa1131100:CDS |
GCTATTTCATTCACCGATGA+TGG | 0.410514 | 7_3:+83519884 | None:intergenic |
TCAACAAACAAGTCATAATC+TGG | 0.410645 | 7_3:-83519774 | Msa1131100:CDS |
ATGGGAATGAGAGGTATTCT+TGG | 0.411367 | 7_3:-83518714 | Msa1131100:CDS |
GACATTGTTTGTTTAGTTTG+TGG | 0.426333 | 7_3:-83519368 | Msa1131100:CDS |
CTGCAAGTGCAAATACTGTA+AGG | 0.426643 | 7_3:-83519122 | Msa1131100:CDS |
GGAATCCAAAATAATATCAA+TGG | 0.427814 | 7_3:-83518733 | Msa1131100:CDS |
ATTAAGCAAAAGACTTCTAC+TGG | 0.430490 | 7_3:-83517340 | Msa1131100:CDS |
CTGGACTTGAATGAGCCATT+CGG | 0.434486 | 7_3:-83517321 | Msa1131100:CDS |
GAAGTCCCCGCTGTTGCGCT+TGG | 0.436355 | 7_3:+83519725 | None:intergenic |
ACTTACACTGCTTGTTGCAT+TGG | 0.437752 | 7_3:+83519059 | None:intergenic |
AAAGATTGATGAGAAATTGA+AGG | 0.437819 | 7_3:-83518764 | Msa1131100:intron |
GAGAAATTGAAGGGATCAAT+CGG | 0.439072 | 7_3:-83518754 | Msa1131100:CDS |
ACCTGAAATAGGTAATTTCT+GGG | 0.445985 | 7_3:-83519948 | Msa1131100:CDS |
CAATTATCTCCATTAACAAA+TGG | 0.453252 | 7_3:+83517845 | None:intergenic |
ATGTTGATGGAAGAAGCTTT+TGG | 0.456514 | 7_3:-83518616 | Msa1131100:CDS |
GTTAATGGAGATAATTGAAT+CGG | 0.460264 | 7_3:-83517839 | Msa1131100:intron |
TTGCTTAATCGTATAGCTCC+GGG | 0.462605 | 7_3:+83517354 | None:intergenic |
CTCAGGAAAACGACAACCAT+TGG | 0.462642 | 7_3:-83519156 | Msa1131100:CDS |
GAAACTCCAAGCGCAACAGC+GGG | 0.464068 | 7_3:-83519731 | Msa1131100:CDS |
TTGGAGAGTCCTCCAACAAA+TGG | 0.464964 | 7_3:-83518695 | Msa1131100:CDS |
TTTGCTTAATCGTATAGCTC+CGG | 0.467808 | 7_3:+83517353 | None:intergenic |
GCCACCGAAATGCGTTTGTA+TGG | 0.477551 | 7_3:+83519488 | None:intergenic |
TTCCACATTTCAACAGTTTG+TGG | 0.481433 | 7_3:+83517453 | None:intergenic |
TTCGAAGTCTTGAAGTTGAA+AGG | 0.481443 | 7_3:-83517494 | Msa1131100:CDS |
TGAAGATGGCATATACTTTG+AGG | 0.486004 | 7_3:-83520102 | None:intergenic |
AGAAACTCCAAGCGCAACAG+CGG | 0.487445 | 7_3:-83519732 | Msa1131100:CDS |
CCGAGGTGCGTTACCATGAT+GGG | 0.489289 | 7_3:-83519622 | Msa1131100:CDS |
GAATCCAAAATAATATCAAT+GGG | 0.493433 | 7_3:-83518732 | Msa1131100:CDS |
ACCGAGGTGCGTTACCATGA+TGG | 0.496123 | 7_3:-83519623 | Msa1131100:CDS |
TAGCTCCGGGGAACATCAAA+AGG | 0.501144 | 7_3:+83517367 | None:intergenic |
ATGATAACAGACACACATAC+TGG | 0.502452 | 7_3:-83518592 | Msa1131100:CDS |
TGGAAAAGGAGAAGATGAAG+GGG | 0.508556 | 7_3:-83519348 | Msa1131100:CDS |
TCCGGAAACGAGTATTAATC+CGG | 0.511461 | 7_3:-83519852 | Msa1131100:CDS |
GAAGATGGCATATACTTTGA+GGG | 0.519625 | 7_3:-83520101 | None:intergenic |
CTGTTCCGTAAGTTGTAAAG+AGG | 0.526026 | 7_3:-83518873 | Msa1131100:intron |
TGTGGAAAAGGAGAAGATGA+AGG | 0.530192 | 7_3:-83519350 | Msa1131100:CDS |
TCCGGAACAAAGTTTGCCAA+TGG | 0.531404 | 7_3:-83519834 | Msa1131100:CDS |
AAGATTGATGAGAAATTGAA+GGG | 0.532048 | 7_3:-83518763 | Msa1131100:CDS |
AGCACAAGAACGGTGATAAG+TGG | 0.533107 | 7_3:+83519298 | None:intergenic |
GAAAGTGAGTCAAATATTGA+AGG | 0.536289 | 7_3:-83520034 | Msa1131100:CDS |
GTCGCAACAGCTACATAAGA+TGG | 0.537125 | 7_3:+83519565 | None:intergenic |
GGCTCCATTGAAAATTCGAC+CGG | 0.537301 | 7_3:+83519586 | None:intergenic |
GATGATGGAACTGTTTCCAT+TGG | 0.538815 | 7_3:+83519818 | None:intergenic |
AACTGAAACACCTCCATCAT+CGG | 0.540100 | 7_3:-83519897 | Msa1131100:CDS |
AGTTGTCAACCATGCTAGGA+TGG | 0.543516 | 7_3:+83519667 | None:intergenic |
CTTGACTCTACAGATTTCAT+GGG | 0.545472 | 7_3:-83517930 | Msa1131100:intron |
GACCGTCGACCTCGTCGACC+TGG | 0.547724 | 7_3:+83519989 | None:intergenic |
CTGTAAGGGTGATGATGAAG+AGG | 0.550087 | 7_3:-83519107 | Msa1131100:CDS |
TGGCTGCACATGATGTCTAA+AGG | 0.551274 | 7_3:+83519079 | None:intergenic |
ACTTGCAAGGAAATTGATGA+AGG | 0.553512 | 7_3:-83519647 | Msa1131100:CDS |
GCCTCATCTGTGGCAATGAA+AGG | 0.555749 | 7_3:+83517889 | None:intergenic |
TGCAAGTTGTCAACCATGCT+AGG | 0.558541 | 7_3:+83519663 | None:intergenic |
GCCTTTCATTGCCACAGATG+AGG | 0.563244 | 7_3:-83517890 | Msa1131100:CDS |
CCCATCATGGTAACGCACCT+CGG | 0.563559 | 7_3:+83519622 | None:intergenic |
GATTAGTAAATGGTTGAAAG+AGG | 0.563585 | 7_3:-83519435 | Msa1131100:CDS |
AAACAAACAATGTCATGTAT+GGG | 0.563802 | 7_3:+83519377 | None:intergenic |
TTATGTAATAAGCAATTCAA+AGG | 0.566767 | 7_3:-83518653 | Msa1131100:CDS |
ACGCACAAGACCAAATTATG+TGG | 0.574274 | 7_3:-83520077 | Msa1131100:CDS |
ATAATATCAATGGGAATGAG+AGG | 0.575607 | 7_3:-83518723 | Msa1131100:CDS |
AGTTTGTGGATTAGATGGAA+TGG | 0.581324 | 7_3:+83517467 | None:intergenic |
GCCTCTGTATGCCTCATCTG+TGG | 0.584277 | 7_3:+83517879 | None:intergenic |
ATCCACAAACTGTTGAAATG+TGG | 0.588515 | 7_3:-83517455 | Msa1131100:CDS |
GCGACGAGGAAATCTCTGTA+TGG | 0.591878 | 7_3:-83519547 | Msa1131100:CDS |
GTGGAAAAGGAGAAGATGAA+GGG | 0.593089 | 7_3:-83519349 | Msa1131100:CDS |
TGAAGGGTTAGAAGCAAACT+GGG | 0.594789 | 7_3:-83520017 | Msa1131100:CDS |
AAAGTGAGTCAAATATTGAA+GGG | 0.601009 | 7_3:-83520033 | Msa1131100:CDS |
ACCATACAAACGCATTTCGG+TGG | 0.602664 | 7_3:-83519489 | Msa1131100:CDS |
AATACTCGTTTCCGGAACAA+TGG | 0.603556 | 7_3:+83519859 | None:intergenic |
TAATTGCTGCAGCTACCGTA+AGG | 0.611328 | 7_3:-83518102 | Msa1131100:intron |
TGCTTAGATCAAATCTGAGG+AGG | 0.617602 | 7_3:-83518174 | Msa1131100:intron |
CCTGTATAAAAGCACAAGAA+CGG | 0.617850 | 7_3:+83519288 | None:intergenic |
ACAAGAACGGTGATAAGTGG+AGG | 0.625049 | 7_3:+83519301 | None:intergenic |
AGCATGGTTGACAACTTGCA+AGG | 0.627667 | 7_3:-83519660 | Msa1131100:CDS |
TGCAAGTGCAAATACTGTAA+GGG | 0.630487 | 7_3:-83519121 | Msa1131100:CDS |
ATTTCATTCACCGATGATGG+AGG | 0.630618 | 7_3:+83519887 | None:intergenic |
AACCAGGTCGACGAGGTCGA+CGG | 0.633162 | 7_3:-83519991 | Msa1131100:CDS |
TGCAGTAAGAACATAACCAA+TGG | 0.637831 | 7_3:+83519140 | None:intergenic |
AATTGCTTAGATCAAATCTG+AGG | 0.638264 | 7_3:-83518177 | Msa1131100:intron |
AACGCATTTCGGTGGCAAAG+CGG | 0.641653 | 7_3:-83519481 | Msa1131100:CDS |
CGAGGTGCGTTACCATGATG+GGG | 0.652213 | 7_3:-83519621 | Msa1131100:CDS |
CTTGCAAGGAAATTGATGAA+GGG | 0.653849 | 7_3:-83519646 | Msa1131100:CDS |
ACAAATGGATACGAAAAGTG+AGG | 0.660093 | 7_3:-83518680 | Msa1131100:CDS |
TTAGGCTCAACATCCCCGAA+TGG | 0.660828 | 7_3:+83517306 | None:intergenic |
CACACATACTGGCGTCAATG+TGG | 0.663750 | 7_3:-83518581 | Msa1131100:CDS |
CTTATGTAGCTGTTGCGACG+AGG | 0.663870 | 7_3:-83519561 | Msa1131100:CDS |
GGAAAAGGAGAAGATGAAGG+GGG | 0.669030 | 7_3:-83519347 | Msa1131100:CDS |
CAAGAACGGTGATAAGTGGA+GGG | 0.669312 | 7_3:+83519302 | None:intergenic |
GCCACAGATGAGGCATACAG+AGG | 0.671197 | 7_3:-83517880 | Msa1131100:CDS |
AGAGTGTTCTATACAACCGC+AGG | 0.671533 | 7_3:-83518555 | Msa1131100:intron |
TGCTTAATCGTATAGCTCCG+GGG | 0.678737 | 7_3:+83517355 | None:intergenic |
GGAAATTGATGAAGGGACCG+AGG | 0.685280 | 7_3:-83519639 | Msa1131100:CDS |
GGACTTGAATGAGCCATTCG+GGG | 0.695242 | 7_3:-83517319 | Msa1131100:CDS |
AAACTCCAAGCGCAACAGCG+GGG | 0.743032 | 7_3:-83519730 | Msa1131100:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTTTTTTTTTTTTTTTT+GGG | + | chr7_3:83519170-83519189 | None:intergenic | 0.0% |
!!! | AAATTTTTTTTTTTTTTTTT+TGG | + | chr7_3:83519171-83519190 | None:intergenic | 0.0% |
!!! | TTTTTATAATGTTTTATTTC+TGG | + | chr7_3:83517701-83517720 | None:intergenic | 10.0% |
!!! | AATAATTTGTTATTTCTTCA+CGG | - | chr7_3:83519377-83519396 | Msa1131100:CDS | 15.0% |
!!! | AATTTAATTCACTTGTTTTA+AGG | - | chr7_3:83519809-83519828 | Msa1131100:CDS | 15.0% |
!!! | AGTTTACAAAATGATTTTGT+AGG | - | chr7_3:83518446-83518465 | Msa1131100:intron | 20.0% |
!!! | AATCTTTCACAGTTTTTTTT+AGG | + | chr7_3:83518484-83518503 | None:intergenic | 20.0% |
!! | AAACTGTGAAAGATTTATTA+AGG | - | chr7_3:83518489-83518508 | Msa1131100:intron | 20.0% |
!! | AATCAAATACATGATATTTG+TGG | - | chr7_3:83518588-83518607 | Msa1131100:CDS | 20.0% |
!! | ATCAAATACATGATATTTGT+GGG | - | chr7_3:83518589-83518608 | Msa1131100:CDS | 20.0% |
!! | GAATCCAAAATAATATCAAT+GGG | - | chr7_3:83518658-83518677 | Msa1131100:CDS | 20.0% |
!! | TTATGTAATAAGCAATTCAA+AGG | - | chr7_3:83518737-83518756 | Msa1131100:CDS | 20.0% |
!! | TGGTAAAAAATATATTTGGT+TGG | + | chr7_3:83518919-83518938 | None:intergenic | 20.0% |
!!! | ACTTTAGATTAAAAGAGTAT+CGG | - | chr7_3:83518974-83518993 | Msa1131100:intron | 20.0% |
!!! | CTTTTTCAACTATTTTGTTT+TGG | - | chr7_3:83519336-83519355 | Msa1131100:CDS | 20.0% |
!!! | ATAATTTGTTATTTCTTCAC+GGG | - | chr7_3:83519378-83519397 | Msa1131100:CDS | 20.0% |
! | TCACTTATTTCCACATAATT+TGG | + | chr7_3:83517326-83517345 | None:intergenic | 25.0% |
! | AAAGTGAGTCAAATATTGAA+GGG | - | chr7_3:83517357-83517376 | Msa1131100:CDS | 25.0% |
!! | ATTTACTAATCAGGATGTTT+TGG | + | chr7_3:83517946-83517965 | None:intergenic | 25.0% |
! | AAAACATCCTGATTAGTAAA+TGG | - | chr7_3:83517945-83517964 | Msa1131100:intron | 25.0% |
! | AAACAAACAATGTCATGTAT+GGG | + | chr7_3:83518016-83518035 | None:intergenic | 25.0% |
! | TAAACAAACAATGTCATGTA+TGG | + | chr7_3:83518017-83518036 | None:intergenic | 25.0% |
!! | TTTTTCTTTTGCTTACATGA+AGG | - | chr7_3:83518145-83518164 | Msa1131100:CDS | 25.0% |
!! | TTTTCTTTTGCTTACATGAA+GGG | - | chr7_3:83518146-83518165 | Msa1131100:CDS | 25.0% |
!!! | TCTTTTCATTTTTATACTGC+AGG | - | chr7_3:83518205-83518224 | Msa1131100:intron | 25.0% |
!!! | CTTTTCATTTTTATACTGCA+GGG | - | chr7_3:83518206-83518225 | Msa1131100:intron | 25.0% |
!! | AAAATGATTTTGTAGGTCAT+TGG | - | chr7_3:83518453-83518472 | Msa1131100:intron | 25.0% |
! | AAAGATTGATGAGAAATTGA+AGG | - | chr7_3:83518626-83518645 | Msa1131100:CDS | 25.0% |
! | AAGATTGATGAGAAATTGAA+GGG | - | chr7_3:83518627-83518646 | Msa1131100:CDS | 25.0% |
! | GGAATCCAAAATAATATCAA+TGG | - | chr7_3:83518657-83518676 | Msa1131100:CDS | 25.0% |
!! | CATTCCCATTGATATTATTT+TGG | + | chr7_3:83518665-83518684 | None:intergenic | 25.0% |
!! | AAAAATATATTTGGTTGGTG+CGG | + | chr7_3:83518914-83518933 | None:intergenic | 25.0% |
! | GCAGTGGTAAAAAATATATT+TGG | + | chr7_3:83518923-83518942 | None:intergenic | 25.0% |
!! | TAATCTAAAGTGTCATTACA+TGG | + | chr7_3:83518965-83518984 | None:intergenic | 25.0% |
!!! | CTTTAGATTAAAAGAGTATC+GGG | - | chr7_3:83518975-83518994 | Msa1131100:intron | 25.0% |
! | AGATTTGATCTAAGCAATTA+AGG | + | chr7_3:83519212-83519231 | None:intergenic | 25.0% |
!!! | GTTGAAAAAGTATCAACAAT+TGG | + | chr7_3:83519326-83519345 | None:intergenic | 25.0% |
!!! | CAACTATTTTGTTTTGGTTA+TGG | - | chr7_3:83519342-83519361 | Msa1131100:CDS | 25.0% |
! | CAATTATCTCCATTAACAAA+TGG | + | chr7_3:83519548-83519567 | None:intergenic | 25.0% |
! | GTTAATGGAGATAATTGAAT+CGG | - | chr7_3:83519551-83519570 | Msa1131100:CDS | 25.0% |
!!! | TGCATATCACATTTTGAAAA+TGG | + | chr7_3:83519645-83519664 | None:intergenic | 25.0% |
! | AATTAAGTTCAATGGAAAAG+TGG | + | chr7_3:83519760-83519779 | None:intergenic | 25.0% |
! | ATGAATGCAATTAAGTTCAA+TGG | + | chr7_3:83519768-83519787 | None:intergenic | 25.0% |
! | CAAAAAGTTGAAGAAAGATA+TGG | - | chr7_3:83519990-83520009 | Msa1131100:CDS | 25.0% |
GAAAGTGAGTCAAATATTGA+AGG | - | chr7_3:83517356-83517375 | Msa1131100:CDS | 30.0% | |
! | AAATTACCTATTTCAGGTCT+TGG | + | chr7_3:83517440-83517459 | None:intergenic | 30.0% |
ACCTGAAATAGGTAATTTCT+GGG | - | chr7_3:83517442-83517461 | Msa1131100:CDS | 30.0% | |
TCAACAAACAAGTCATAATC+TGG | - | chr7_3:83517616-83517635 | Msa1131100:intron | 30.0% | |
ATAAAAAAACCATCCTAGCA+TGG | - | chr7_3:83517714-83517733 | Msa1131100:intron | 30.0% | |
CTTTCAACCATTTACTAATC+AGG | + | chr7_3:83517955-83517974 | None:intergenic | 30.0% | |
GATTAGTAAATGGTTGAAAG+AGG | - | chr7_3:83517955-83517974 | Msa1131100:intron | 30.0% | |
!! | GACATTGTTTGTTTAGTTTG+TGG | - | chr7_3:83518022-83518041 | Msa1131100:intron | 30.0% |
!! | GTTTGTTTAGTTTGTGGAAA+AGG | - | chr7_3:83518028-83518047 | Msa1131100:intron | 30.0% |
TTGAAATATCAGATGATGAC+CGG | + | chr7_3:83518362-83518381 | None:intergenic | 30.0% | |
AGTTATGGTCATGAAAACAA+AGG | + | chr7_3:83518417-83518436 | None:intergenic | 30.0% | |
TAAACTACTTCAGAGAGTTA+TGG | + | chr7_3:83518432-83518451 | None:intergenic | 30.0% | |
!!! | GTATGCATTCATTTTTTCTG+TGG | - | chr7_3:83518539-83518558 | Msa1131100:intron | 30.0% |
ATAATATCAATGGGAATGAG+AGG | - | chr7_3:83518667-83518686 | Msa1131100:CDS | 30.0% | |
AATTGCTTAGATCAAATCTG+AGG | - | chr7_3:83519213-83519232 | Msa1131100:intron | 30.0% | |
AAGTATCAACAATTGGAAAG+AGG | + | chr7_3:83519319-83519338 | None:intergenic | 30.0% | |
! | ACGAATTTGCCATTTGTTAA+TGG | - | chr7_3:83519536-83519555 | Msa1131100:CDS | 30.0% |
ATACAACATGCATGAGATAT+AGG | + | chr7_3:83519594-83519613 | None:intergenic | 30.0% | |
GCAAAAATATAACTTCAGTG+AGG | - | chr7_3:83519960-83519979 | Msa1131100:CDS | 30.0% | |
ATTAAGCAAAAGACTTCTAC+TGG | - | chr7_3:83520050-83520069 | Msa1131100:CDS | 30.0% | |
GACCTGAAATAGGTAATTTC+TGG | - | chr7_3:83517441-83517460 | Msa1131100:CDS | 35.0% | |
TCCCAGAAATTACCTATTTC+AGG | + | chr7_3:83517446-83517465 | None:intergenic | 35.0% | |
TGAAATAGCTACCATTGTTC+CGG | - | chr7_3:83517520-83517539 | Msa1131100:intron | 35.0% | |
CTTGTTTCGTTCATTGATGA+TGG | + | chr7_3:83517590-83517609 | None:intergenic | 35.0% | |
ACTTGCAAGGAAATTGATGA+AGG | - | chr7_3:83517743-83517762 | Msa1131100:intron | 35.0% | |
CTTGCAAGGAAATTGATGAA+GGG | - | chr7_3:83517744-83517763 | Msa1131100:intron | 35.0% | |
TTGAAAATTCGACCGGTTAT+CGG | + | chr7_3:83517800-83517819 | None:intergenic | 35.0% | |
! | ATAACCGGTCGAATTTTCAA+TGG | - | chr7_3:83517800-83517819 | Msa1131100:intron | 35.0% |
!! | TACTAATCAGGATGTTTTGG+AGG | + | chr7_3:83517943-83517962 | None:intergenic | 35.0% |
AAGAGGATGAACAAAAACGT+CGG | - | chr7_3:83517972-83517991 | Msa1131100:intron | 35.0% | |
! | CCTGTATAAAAGCACAAGAA+CGG | + | chr7_3:83518105-83518124 | None:intergenic | 35.0% |
TGCAGTAAGAACATAACCAA+TGG | + | chr7_3:83518253-83518272 | None:intergenic | 35.0% | |
TGCAAGTGCAAATACTGTAA+GGG | - | chr7_3:83518269-83518288 | Msa1131100:intron | 35.0% | |
TATGGTCATGAAAACAAAGG+AGG | + | chr7_3:83518414-83518433 | None:intergenic | 35.0% | |
GCATACCTCTTTACAACTTA+CGG | + | chr7_3:83518525-83518544 | None:intergenic | 35.0% | |
GAGAAATTGAAGGGATCAAT+CGG | - | chr7_3:83518636-83518655 | Msa1131100:CDS | 35.0% | |
!! | TTTTCGTATCCATTTGTTGG+AGG | + | chr7_3:83518707-83518726 | None:intergenic | 35.0% |
! | CACTTTTCGTATCCATTTGT+TGG | + | chr7_3:83518710-83518729 | None:intergenic | 35.0% |
ACAAATGGATACGAAAAGTG+AGG | - | chr7_3:83518710-83518729 | Msa1131100:CDS | 35.0% | |
!! | ATGTTGATGGAAGAAGCTTT+TGG | - | chr7_3:83518774-83518793 | Msa1131100:intron | 35.0% |
!! | TGTTGATGGAAGAAGCTTTT+GGG | - | chr7_3:83518775-83518794 | Msa1131100:intron | 35.0% |
ATGATAACAGACACACATAC+TGG | - | chr7_3:83518798-83518817 | Msa1131100:intron | 35.0% | |
!! | AATTAAGAAGTGCTTACCTG+CGG | + | chr7_3:83518854-83518873 | None:intergenic | 35.0% |
ATAGTGAGTGATAAATGCAG+TGG | + | chr7_3:83518939-83518958 | None:intergenic | 35.0% | |
CTTGACTCTACAGATTTCAT+GGG | - | chr7_3:83519460-83519479 | Msa1131100:CDS | 35.0% | |
ACATATCTCTCTCTTCTACA+AGG | + | chr7_3:83519723-83519742 | None:intergenic | 35.0% | |
AAGTTCAATGGAAAAGTGGA+AGG | + | chr7_3:83519756-83519775 | None:intergenic | 35.0% | |
TTCGAAGTCTTGAAGTTGAA+AGG | - | chr7_3:83519896-83519915 | Msa1131100:CDS | 35.0% | |
!! | AGTTTGTGGATTAGATGGAA+TGG | + | chr7_3:83519926-83519945 | None:intergenic | 35.0% |
!! | TCAACAGTTTGTGGATTAGA+TGG | + | chr7_3:83519931-83519950 | None:intergenic | 35.0% |
ATCCACAAACTGTTGAAATG+TGG | - | chr7_3:83519935-83519954 | Msa1131100:CDS | 35.0% | |
TTCCACATTTCAACAGTTTG+TGG | + | chr7_3:83519940-83519959 | None:intergenic | 35.0% | |
! | TATAACCTTTTGATGTTCCC+CGG | - | chr7_3:83520018-83520037 | Msa1131100:CDS | 35.0% |
TTTGCTTAATCGTATAGCTC+CGG | + | chr7_3:83520040-83520059 | None:intergenic | 35.0% | |
ACGCACAAGACCAAATTATG+TGG | - | chr7_3:83517313-83517332 | Msa1131100:CDS | 40.0% | |
TTGAAGGGTTAGAAGCAAAC+TGG | - | chr7_3:83517372-83517391 | Msa1131100:CDS | 40.0% | |
TGAAGGGTTAGAAGCAAACT+GGG | - | chr7_3:83517373-83517392 | Msa1131100:CDS | 40.0% | |
AACTGAAACACCTCCATCAT+CGG | - | chr7_3:83517493-83517512 | Msa1131100:CDS | 40.0% | |
! | ATTTCATTCACCGATGATGG+AGG | + | chr7_3:83517506-83517525 | None:intergenic | 40.0% |
! | GCTATTTCATTCACCGATGA+TGG | + | chr7_3:83517509-83517528 | None:intergenic | 40.0% |
AATACTCGTTTCCGGAACAA+TGG | + | chr7_3:83517534-83517553 | None:intergenic | 40.0% | |
TCCGGAAACGAGTATTAATC+CGG | - | chr7_3:83517538-83517557 | Msa1131100:intron | 40.0% | |
TCCGGATTAATACTCGTTTC+CGG | + | chr7_3:83517542-83517561 | None:intergenic | 40.0% | |
TCCATTGGCAAACTTTGTTC+CGG | + | chr7_3:83517560-83517579 | None:intergenic | 40.0% | |
!! | GATGATGGAACTGTTTCCAT+TGG | + | chr7_3:83517575-83517594 | None:intergenic | 40.0% |
!!! | TTATCGGTTTTTCCCCATCA+TGG | + | chr7_3:83517784-83517803 | None:intergenic | 40.0% |
GCAACCATACAAACGCATTT+CGG | - | chr7_3:83517898-83517917 | Msa1131100:CDS | 40.0% | |
!!! | AATCAGGATGTTTTGGAGGA+AGG | + | chr7_3:83517939-83517958 | None:intergenic | 40.0% |
AGAGGATGAACAAAAACGTC+GGG | - | chr7_3:83517973-83517992 | Msa1131100:intron | 40.0% | |
TGTGGAAAAGGAGAAGATGA+AGG | - | chr7_3:83518040-83518059 | Msa1131100:intron | 40.0% | |
GTGGAAAAGGAGAAGATGAA+GGG | - | chr7_3:83518041-83518060 | Msa1131100:intron | 40.0% | |
TGGAAAAGGAGAAGATGAAG+GGG | - | chr7_3:83518042-83518061 | Msa1131100:intron | 40.0% | |
! | CCGTTCTTGTGCTTTTATAC+AGG | - | chr7_3:83518102-83518121 | Msa1131100:intron | 40.0% |
! | TATACTGCAGGGTTTTTCTC+AGG | - | chr7_3:83518217-83518236 | Msa1131100:intron | 40.0% |
CTGCAAGTGCAAATACTGTA+AGG | - | chr7_3:83518268-83518287 | Msa1131100:intron | 40.0% | |
! | ACTTACACTGCTTGTTGCAT+TGG | + | chr7_3:83518334-83518353 | None:intergenic | 40.0% |
! | CAAGCAGTGTAAGTTTTCTC+CGG | - | chr7_3:83518340-83518359 | Msa1131100:intron | 40.0% |
TCATGAAAACAAAGGAGGTG+AGG | + | chr7_3:83518409-83518428 | None:intergenic | 40.0% | |
CTGTTCCGTAAGTTGTAAAG+AGG | - | chr7_3:83518517-83518536 | Msa1131100:intron | 40.0% | |
!! | ATGGGAATGAGAGGTATTCT+TGG | - | chr7_3:83518676-83518695 | Msa1131100:CDS | 40.0% |
TGCTTAGATCAAATCTGAGG+AGG | - | chr7_3:83519216-83519235 | Msa1131100:intron | 40.0% | |
TGGAAAGAGGACATACCTTA+CGG | + | chr7_3:83519306-83519325 | None:intergenic | 40.0% | |
CCATGAAATCTGTAGAGTCA+AGG | + | chr7_3:83519462-83519481 | None:intergenic | 40.0% | |
CCTTGACTCTACAGATTTCA+TGG | - | chr7_3:83519459-83519478 | Msa1131100:CDS | 40.0% | |
!! | CTCTTCTACAAGGAGTGTTA+TGG | + | chr7_3:83519713-83519732 | None:intergenic | 40.0% |
TTGCTTAATCGTATAGCTCC+GGG | + | chr7_3:83520039-83520058 | None:intergenic | 40.0% | |
GAAGCAAACTGGGAAAAACC+AGG | - | chr7_3:83517383-83517402 | Msa1131100:CDS | 45.0% | |
CGTAGACCAAGACCTGAAAT+AGG | - | chr7_3:83517431-83517450 | Msa1131100:CDS | 45.0% | |
TCCGGAACAAAGTTTGCCAA+TGG | - | chr7_3:83517556-83517575 | Msa1131100:intron | 45.0% | |
AGTTGTCAACCATGCTAGGA+TGG | + | chr7_3:83517726-83517745 | None:intergenic | 45.0% | |
TGCAAGTTGTCAACCATGCT+AGG | + | chr7_3:83517730-83517749 | None:intergenic | 45.0% | |
AGCATGGTTGACAACTTGCA+AGG | - | chr7_3:83517730-83517749 | Msa1131100:intron | 45.0% | |
GATGGGGAAAAACCGATAAC+CGG | - | chr7_3:83517785-83517804 | Msa1131100:intron | 45.0% | |
GGCTCCATTGAAAATTCGAC+CGG | + | chr7_3:83517807-83517826 | None:intergenic | 45.0% | |
GTCGCAACAGCTACATAAGA+TGG | + | chr7_3:83517828-83517847 | None:intergenic | 45.0% | |
ACCATACAAACGCATTTCGG+TGG | - | chr7_3:83517901-83517920 | Msa1131100:CDS | 45.0% | |
GGAAAAGGAGAAGATGAAGG+GGG | - | chr7_3:83518043-83518062 | Msa1131100:intron | 45.0% | |
CAAGAACGGTGATAAGTGGA+GGG | + | chr7_3:83518091-83518110 | None:intergenic | 45.0% | |
ACAAGAACGGTGATAAGTGG+AGG | + | chr7_3:83518092-83518111 | None:intergenic | 45.0% | |
AGCACAAGAACGGTGATAAG+TGG | + | chr7_3:83518095-83518114 | None:intergenic | 45.0% | |
CTCAGGAAAACGACAACCAT+TGG | - | chr7_3:83518234-83518253 | Msa1131100:intron | 45.0% | |
! | CTGTAAGGGTGATGATGAAG+AGG | - | chr7_3:83518283-83518302 | Msa1131100:intron | 45.0% |
TGGCTGCACATGATGTCTAA+AGG | + | chr7_3:83518314-83518333 | None:intergenic | 45.0% | |
TGAAAACAAAGGAGGTGAGG+TGG | + | chr7_3:83518406-83518425 | None:intergenic | 45.0% | |
TTGGAGAGTCCTCCAACAAA+TGG | - | chr7_3:83518695-83518714 | Msa1131100:CDS | 45.0% | |
! | AGAGTGTTCTATACAACCGC+AGG | - | chr7_3:83518835-83518854 | Msa1131100:intron | 45.0% |
GTATCGGGTGTCTAACAAAG+TGG | - | chr7_3:83518990-83519009 | Msa1131100:intron | 45.0% | |
TAATTGCTGCAGCTACCGTA+AGG | - | chr7_3:83519288-83519307 | Msa1131100:intron | 45.0% | |
TGCTTAATCGTATAGCTCCG+GGG | + | chr7_3:83520038-83520057 | None:intergenic | 45.0% | |
CTGGACTTGAATGAGCCATT+CGG | - | chr7_3:83520069-83520088 | Msa1131100:CDS | 45.0% | |
TGGACTTGAATGAGCCATTC+GGG | - | chr7_3:83520070-83520089 | Msa1131100:CDS | 45.0% | |
AGAAACTCCAAGCGCAACAG+CGG | - | chr7_3:83517658-83517677 | Msa1131100:intron | 50.0% | |
GGAAATTGATGAAGGGACCG+AGG | - | chr7_3:83517751-83517770 | Msa1131100:intron | 50.0% | |
CTTATGTAGCTGTTGCGACG+AGG | - | chr7_3:83517829-83517848 | Msa1131100:intron | 50.0% | |
GCGACGAGGAAATCTCTGTA+TGG | - | chr7_3:83517843-83517862 | Msa1131100:CDS | 50.0% | |
GCCACCGAAATGCGTTTGTA+TGG | + | chr7_3:83517905-83517924 | None:intergenic | 50.0% | |
AACGCATTTCGGTGGCAAAG+CGG | - | chr7_3:83517909-83517928 | Msa1131100:CDS | 50.0% | |
TGCAGCTGCTTGCATGTTGA+TGG | - | chr7_3:83518761-83518780 | Msa1131100:CDS | 50.0% | |
CACACATACTGGCGTCAATG+TGG | - | chr7_3:83518809-83518828 | Msa1131100:intron | 50.0% | |
TCGGGTGTCTAACAAAGTGG+AGG | - | chr7_3:83518993-83519012 | Msa1131100:intron | 50.0% | |
GCCTTTCATTGCCACAGATG+AGG | - | chr7_3:83519500-83519519 | Msa1131100:CDS | 50.0% | |
GCCTCATCTGTGGCAATGAA+AGG | + | chr7_3:83519504-83519523 | None:intergenic | 50.0% | |
TAGCTCCGGGGAACATCAAA+AGG | + | chr7_3:83520026-83520045 | None:intergenic | 50.0% | |
GGACTTGAATGAGCCATTCG+GGG | - | chr7_3:83520071-83520090 | Msa1131100:CDS | 50.0% | |
TTAGGCTCAACATCCCCGAA+TGG | + | chr7_3:83520087-83520106 | None:intergenic | 50.0% | |
TGGGAAAAACCAGGTCGACG+AGG | - | chr7_3:83517392-83517411 | Msa1131100:CDS | 55.0% | |
GAAACTCCAAGCGCAACAGC+GGG | - | chr7_3:83517659-83517678 | Msa1131100:intron | 55.0% | |
AAACTCCAAGCGCAACAGCG+GGG | - | chr7_3:83517660-83517679 | Msa1131100:intron | 55.0% | |
ACCGAGGTGCGTTACCATGA+TGG | - | chr7_3:83517767-83517786 | Msa1131100:intron | 55.0% | |
! | CCCATCATGGTAACGCACCT+CGG | + | chr7_3:83517771-83517790 | None:intergenic | 55.0% |
CCGAGGTGCGTTACCATGAT+GGG | - | chr7_3:83517768-83517787 | Msa1131100:intron | 55.0% | |
CGAGGTGCGTTACCATGATG+GGG | - | chr7_3:83517769-83517788 | Msa1131100:intron | 55.0% | |
GGAGGTGAGGTGGATGAGTA+GGG | + | chr7_3:83518396-83518415 | None:intergenic | 55.0% | |
AGGAGGTGAGGTGGATGAGT+AGG | + | chr7_3:83518397-83518416 | None:intergenic | 55.0% | |
GCCACAGATGAGGCATACAG+AGG | - | chr7_3:83519510-83519529 | Msa1131100:CDS | 55.0% | |
GCCTCTGTATGCCTCATCTG+TGG | + | chr7_3:83519514-83519533 | None:intergenic | 55.0% | |
AACCAGGTCGACGAGGTCGA+CGG | - | chr7_3:83517399-83517418 | Msa1131100:CDS | 60.0% | |
GAAGTCCCCGCTGTTGCGCT+TGG | + | chr7_3:83517668-83517687 | None:intergenic | 65.0% | |
GACCGTCGACCTCGTCGACC+TGG | + | chr7_3:83517404-83517423 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 83517293 | 83520119 | 83517293 | ID=Msa1131100;Name=Msa1131100 |
chr7_3 | mRNA | 83517293 | 83520119 | 83517293 | ID=Msa1131100-mRNA-1;Parent=Msa1131100;Name=Msa1131100-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|1|1|7|0|554 |
chr7_3 | exon | 83519289 | 83520119 | 83519289 | ID=Msa1131100-mRNA-1:exon:24810;Parent=Msa1131100-mRNA-1 |
chr7_3 | exon | 83519065 | 83519185 | 83519065 | ID=Msa1131100-mRNA-1:exon:24809;Parent=Msa1131100-mRNA-1 |
chr7_3 | exon | 83518874 | 83518944 | 83518874 | ID=Msa1131100-mRNA-1:exon:24808;Parent=Msa1131100-mRNA-1 |
chr7_3 | exon | 83518556 | 83518782 | 83518556 | ID=Msa1131100-mRNA-1:exon:24807;Parent=Msa1131100-mRNA-1 |
chr7_3 | exon | 83518103 | 83518189 | 83518103 | ID=Msa1131100-mRNA-1:exon:24806;Parent=Msa1131100-mRNA-1 |
chr7_3 | exon | 83517840 | 83517939 | 83517840 | ID=Msa1131100-mRNA-1:exon:24805;Parent=Msa1131100-mRNA-1 |
chr7_3 | exon | 83517293 | 83517520 | 83517293 | ID=Msa1131100-mRNA-1:exon:24804;Parent=Msa1131100-mRNA-1 |
chr7_3 | CDS | 83519289 | 83520119 | 83519289 | ID=Msa1131100-mRNA-1:cds;Parent=Msa1131100-mRNA-1 |
chr7_3 | CDS | 83519065 | 83519185 | 83519065 | ID=Msa1131100-mRNA-1:cds;Parent=Msa1131100-mRNA-1 |
chr7_3 | CDS | 83518874 | 83518944 | 83518874 | ID=Msa1131100-mRNA-1:cds;Parent=Msa1131100-mRNA-1 |
chr7_3 | CDS | 83518556 | 83518782 | 83518556 | ID=Msa1131100-mRNA-1:cds;Parent=Msa1131100-mRNA-1 |
chr7_3 | CDS | 83518103 | 83518189 | 83518103 | ID=Msa1131100-mRNA-1:cds;Parent=Msa1131100-mRNA-1 |
chr7_3 | CDS | 83517840 | 83517939 | 83517840 | ID=Msa1131100-mRNA-1:cds;Parent=Msa1131100-mRNA-1 |
chr7_3 | CDS | 83517293 | 83517520 | 83517293 | ID=Msa1131100-mRNA-1:cds;Parent=Msa1131100-mRNA-1 |
Gene Sequence |
Protein sequence |