Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132030 | ABD32483.2 | 73.464 | 358 | 44 | 4 | 1 | 345 | 4 | 323 | 4.78e-179 | 509 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132030 | sp|Q8L3W1|VRN1_ARATH | 41.414 | 99 | 58 | 0 | 15 | 113 | 6 | 104 | 2.41e-19 | 90.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132030 | Q2HSK0 | 73.464 | 358 | 44 | 4 | 1 | 345 | 4 | 323 | 2.28e-179 | 509 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1132030 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132030 | MtrunA17_Chr7g0233561 | 73.464 | 358 | 44 | 4 | 1 | 345 | 4 | 323 | 0.0 | 509 |
| Msa1132030 | MtrunA17_Chr3g0131891 | 59.437 | 355 | 87 | 3 | 2 | 345 | 6 | 314 | 6.02e-142 | 405 |
| Msa1132030 | MtrunA17_Chr7g0233541 | 59.639 | 332 | 79 | 7 | 30 | 346 | 1 | 292 | 1.53e-125 | 362 |
| Msa1132030 | MtrunA17_Chr7g0233531 | 60.923 | 325 | 63 | 5 | 30 | 343 | 1 | 272 | 3.32e-120 | 348 |
| Msa1132030 | MtrunA17_Chr7g0233521 | 56.923 | 325 | 76 | 6 | 30 | 343 | 1 | 272 | 7.88e-113 | 329 |
| Msa1132030 | MtrunA17_Chr7g0233571 | 50.000 | 252 | 83 | 4 | 9 | 256 | 4 | 216 | 1.17e-72 | 224 |
| Msa1132030 | MtrunA17_Chr8g0390841 | 33.538 | 325 | 168 | 9 | 13 | 332 | 37 | 318 | 5.37e-49 | 172 |
| Msa1132030 | MtrunA17_Chr1g0208771 | 33.333 | 318 | 164 | 13 | 23 | 336 | 8 | 281 | 1.74e-41 | 150 |
| Msa1132030 | MtrunA17_Chr1g0163071 | 33.225 | 307 | 166 | 9 | 30 | 331 | 1 | 273 | 3.59e-40 | 143 |
| Msa1132030 | MtrunA17_Chr3g0103151 | 53.398 | 103 | 46 | 1 | 12 | 114 | 9 | 109 | 6.40e-33 | 120 |
| Msa1132030 | MtrunA17_Chr3g0103191 | 51.456 | 103 | 48 | 1 | 12 | 114 | 9 | 109 | 1.77e-31 | 119 |
| Msa1132030 | MtrunA17_Chr3g0103181 | 50.485 | 103 | 49 | 1 | 12 | 114 | 9 | 109 | 4.06e-29 | 113 |
| Msa1132030 | MtrunA17_Chr5g0419201 | 47.475 | 99 | 52 | 0 | 15 | 113 | 16 | 114 | 1.92e-28 | 109 |
| Msa1132030 | MtrunA17_Chr1g0163181 | 29.221 | 308 | 172 | 10 | 29 | 334 | 19 | 282 | 5.97e-28 | 113 |
| Msa1132030 | MtrunA17_Chr3g0103171 | 27.597 | 308 | 163 | 12 | 31 | 335 | 6 | 256 | 8.74e-26 | 103 |
| Msa1132030 | MtrunA17_Chr4g0067431 | 28.660 | 321 | 191 | 11 | 13 | 331 | 13 | 297 | 2.83e-25 | 103 |
| Msa1132030 | MtrunA17_Chr1g0163261 | 28.267 | 329 | 170 | 10 | 12 | 335 | 6 | 273 | 2.23e-23 | 98.2 |
| Msa1132030 | MtrunA17_Chr1g0163221 | 26.748 | 329 | 178 | 10 | 9 | 331 | 5 | 276 | 3.53e-23 | 99.0 |
| Msa1132030 | MtrunA17_Chr1g0154111 | 25.904 | 332 | 228 | 6 | 13 | 333 | 24 | 348 | 2.04e-21 | 95.5 |
| Msa1132030 | MtrunA17_Chr1g0171611 | 44.660 | 103 | 55 | 1 | 12 | 114 | 6 | 106 | 2.19e-21 | 92.8 |
| Msa1132030 | MtrunA17_Chr1g0154041 | 25.595 | 336 | 229 | 8 | 10 | 332 | 11 | 338 | 1.03e-20 | 93.2 |
| Msa1132030 | MtrunA17_Chr1g0163231 | 43.689 | 103 | 56 | 1 | 12 | 114 | 6 | 106 | 2.29e-20 | 89.7 |
| Msa1132030 | MtrunA17_Chr1g0154171 | 22.985 | 335 | 222 | 8 | 13 | 333 | 21 | 333 | 5.70e-19 | 87.0 |
| Msa1132030 | MtrunA17_Chr6g0467351 | 37.692 | 130 | 72 | 2 | 13 | 133 | 13 | 142 | 5.70e-19 | 84.7 |
| Msa1132030 | MtrunA17_Chr1g0163131 | 26.284 | 331 | 197 | 11 | 8 | 335 | 11 | 297 | 6.10e-19 | 86.3 |
| Msa1132030 | MtrunA17_Chr1g0163101 | 41.379 | 116 | 65 | 2 | 10 | 125 | 12 | 124 | 1.09e-18 | 82.8 |
| Msa1132030 | MtrunA17_Chr1g0163251 | 47.000 | 100 | 47 | 2 | 15 | 114 | 9 | 102 | 1.58e-18 | 85.9 |
| Msa1132030 | MtrunA17_Chr1g0162441 | 38.384 | 99 | 61 | 0 | 15 | 113 | 7 | 105 | 2.79e-18 | 85.5 |
| Msa1132030 | MtrunA17_Chr1g0162441 | 33.333 | 114 | 70 | 2 | 219 | 332 | 272 | 379 | 3.39e-11 | 63.9 |
| Msa1132030 | MtrunA17_Chr4g0033961 | 35.354 | 99 | 64 | 0 | 15 | 113 | 6 | 104 | 1.65e-17 | 83.2 |
| Msa1132030 | MtrunA17_Chr4g0033961 | 33.913 | 115 | 70 | 2 | 219 | 333 | 268 | 376 | 7.11e-11 | 63.2 |
| Msa1132030 | MtrunA17_Chr1g0154151 | 24.390 | 328 | 190 | 8 | 24 | 333 | 16 | 303 | 3.75e-17 | 81.3 |
| Msa1132030 | MtrunA17_Chr1g0163121 | 48.837 | 86 | 41 | 2 | 29 | 114 | 9 | 91 | 4.02e-17 | 77.4 |
| Msa1132030 | MtrunA17_Chr1g0163241 | 45.238 | 84 | 44 | 1 | 31 | 114 | 23 | 104 | 8.71e-17 | 77.0 |
| Msa1132030 | MtrunA17_Chr1g0163191 | 44.186 | 86 | 46 | 1 | 29 | 114 | 19 | 102 | 3.01e-16 | 75.5 |
| Msa1132030 | MtrunA17_Chr3g0077461 | 34.921 | 126 | 80 | 1 | 6 | 131 | 230 | 353 | 3.36e-16 | 79.3 |
| Msa1132030 | MtrunA17_Chr3g0077461 | 30.137 | 146 | 86 | 3 | 20 | 154 | 13 | 153 | 3.94e-15 | 76.3 |
| Msa1132030 | MtrunA17_Chr3g0077411 | 31.852 | 135 | 88 | 2 | 1 | 131 | 245 | 379 | 4.66e-16 | 79.0 |
| Msa1132030 | MtrunA17_Chr3g0077411 | 31.967 | 122 | 79 | 1 | 8 | 129 | 18 | 135 | 5.25e-16 | 79.0 |
| Msa1132030 | MtrunA17_Chr3g0077451 | 33.010 | 103 | 69 | 0 | 29 | 131 | 10 | 112 | 4.95e-16 | 76.6 |
| Msa1132030 | MtrunA17_Chr1g0154161 | 34.426 | 122 | 77 | 2 | 13 | 131 | 28 | 149 | 2.38e-15 | 75.9 |
| Msa1132030 | MtrunA17_Chr1g0163141 | 45.349 | 86 | 44 | 2 | 29 | 114 | 9 | 91 | 2.49e-15 | 73.6 |
| Msa1132030 | MtrunA17_Chr1g0163201 | 43.678 | 87 | 47 | 1 | 28 | 114 | 16 | 100 | 3.14e-15 | 76.3 |
| Msa1132030 | MtrunA17_Chr1g0162411 | 36.275 | 102 | 65 | 0 | 15 | 116 | 7 | 108 | 1.13e-14 | 74.7 |
| Msa1132030 | MtrunA17_Chr1g0154101 | 36.957 | 92 | 58 | 0 | 13 | 104 | 23 | 114 | 1.64e-14 | 74.7 |
| Msa1132030 | MtrunA17_Chr1g0154101 | 33.654 | 104 | 66 | 2 | 13 | 115 | 182 | 283 | 1.39e-12 | 68.9 |
| Msa1132030 | MtrunA17_Chr1g0163061 | 37.037 | 108 | 61 | 2 | 13 | 116 | 13 | 117 | 2.26e-14 | 72.4 |
| Msa1132030 | MtrunA17_Chr1g0154211 | 36.957 | 92 | 57 | 1 | 13 | 104 | 21 | 111 | 3.94e-14 | 72.8 |
| Msa1132030 | MtrunA17_Chr3g0077381 | 33.036 | 112 | 70 | 2 | 29 | 139 | 34 | 141 | 4.35e-14 | 72.8 |
| Msa1132030 | MtrunA17_Chr3g0077381 | 29.661 | 118 | 83 | 0 | 14 | 131 | 246 | 363 | 4.83e-11 | 63.5 |
| Msa1132030 | MtrunA17_Chr1g0154251 | 38.542 | 96 | 57 | 2 | 13 | 107 | 25 | 119 | 4.59e-14 | 73.2 |
| Msa1132030 | MtrunA17_Chr5g0429931 | 33.721 | 86 | 57 | 0 | 31 | 116 | 11 | 96 | 6.22e-14 | 70.9 |
| Msa1132030 | MtrunA17_Chr3g0077361 | 30.986 | 142 | 88 | 4 | 14 | 149 | 39 | 176 | 9.92e-14 | 72.0 |
| Msa1132030 | MtrunA17_Chr4g0009491 | 30.952 | 126 | 78 | 3 | 29 | 149 | 11 | 132 | 2.05e-13 | 70.9 |
| Msa1132030 | MtrunA17_Chr4g0009491 | 30.508 | 118 | 82 | 0 | 14 | 131 | 224 | 341 | 7.22e-13 | 69.3 |
| Msa1132030 | MtrunA17_Chr1g0154131 | 31.325 | 166 | 99 | 3 | 14 | 174 | 20 | 175 | 2.54e-13 | 70.9 |
| Msa1132030 | MtrunA17_Chr1g0154131 | 34.783 | 92 | 58 | 1 | 13 | 104 | 182 | 271 | 5.06e-12 | 66.6 |
| Msa1132030 | MtrunA17_Chr1g0154191 | 34.615 | 104 | 67 | 1 | 13 | 115 | 20 | 123 | 4.25e-13 | 69.7 |
| Msa1132030 | MtrunA17_Chr1g0162161 | 40.625 | 96 | 54 | 2 | 30 | 125 | 3 | 95 | 5.65e-13 | 66.2 |
| Msa1132030 | MtrunA17_Chr1g0154071 | 31.624 | 117 | 76 | 2 | 16 | 129 | 157 | 272 | 6.49e-13 | 69.7 |
| Msa1132030 | MtrunA17_Chr1g0154071 | 30.894 | 123 | 78 | 3 | 13 | 134 | 26 | 142 | 3.05e-11 | 64.3 |
| Msa1132030 | MtrunA17_Chr1g0154241 | 32.990 | 97 | 64 | 1 | 13 | 109 | 20 | 115 | 5.59e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132030 | AT3G18990.1 | 41.414 | 99 | 58 | 0 | 15 | 113 | 6 | 104 | 2.45e-20 | 90.9 |
| Msa1132030 | AT1G49475.1 | 40.000 | 105 | 62 | 1 | 15 | 119 | 34 | 137 | 4.50e-20 | 87.0 |
| Msa1132030 | AT3G18990.2 | 41.414 | 99 | 58 | 0 | 15 | 113 | 6 | 104 | 5.03e-20 | 90.5 |
| Msa1132030 | AT4G01580.1 | 39.423 | 104 | 63 | 0 | 15 | 118 | 30 | 133 | 1.48e-19 | 85.5 |
| Msa1132030 | AT3G18960.2 | 33.333 | 147 | 82 | 2 | 15 | 145 | 30 | 176 | 5.25e-19 | 84.3 |
| Msa1132030 | AT3G18960.1 | 39.423 | 104 | 63 | 0 | 15 | 118 | 30 | 133 | 6.19e-19 | 84.3 |
| Msa1132030 | AT4G33280.1 | 26.239 | 343 | 200 | 13 | 14 | 346 | 19 | 318 | 2.42e-18 | 85.1 |
| Msa1132030 | AT3G18960.3 | 35.115 | 131 | 69 | 2 | 31 | 145 | 9 | 139 | 1.55e-16 | 77.0 |
| Msa1132030 | AT4G33280.3 | 35.000 | 100 | 61 | 2 | 14 | 109 | 19 | 118 | 5.08e-11 | 63.9 |
Find 54 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGATTTGTACCTCAAATT+TGG | 0.180864 | 7_3:-84892054 | None:intergenic |
| TGCAAAATGGAAATTAAATT+TGG | 0.185593 | 7_3:+84891926 | Msa1132030:CDS |
| TTTCATCGACAATGTGAAAT+TGG | 0.216786 | 7_3:+84892215 | Msa1132030:CDS |
| AGCAGTAGTTGTGTAAAATT+TGG | 0.230825 | 7_3:+84892239 | Msa1132030:CDS |
| AAATTTGAGGTACAAATCTT+TGG | 0.253897 | 7_3:+84892056 | Msa1132030:CDS |
| GTCTCTAGACATATAGCTTT+TGG | 0.313968 | 7_3:-84891894 | None:intergenic |
| CATATTTGACGATAATCTTC+GGG | 0.329018 | 7_3:-84892540 | None:intergenic |
| AGACTCCAAATGGTGCAAAA+TGG | 0.357064 | 7_3:+84891913 | Msa1132030:CDS |
| GAGAGGAGATATTCAACTTC+AGG | 0.365011 | 7_3:+84893229 | Msa1132030:CDS |
| TACGTCTTCTTCATTGTGTC+AGG | 0.377119 | 7_3:+84892319 | Msa1132030:CDS |
| TTCAACTTCAGGTGTTGAAT+AGG | 0.383926 | 7_3:+84893240 | Msa1132030:CDS |
| AGGTGTTGAATAGGAGAGTT+TGG | 0.384492 | 7_3:+84893249 | Msa1132030:CDS |
| CGTTGAACACCACTTTCTTC+CGG | 0.401759 | 7_3:+84892692 | Msa1132030:CDS |
| GACGTAAAATCGTATACCTT+TGG | 0.411964 | 7_3:-84892302 | None:intergenic |
| AAAGGCTTACAAGGTTTCCT+TGG | 0.416023 | 7_3:-84891204 | None:intergenic |
| ACATATTTGACGATAATCTT+CGG | 0.422685 | 7_3:-84892541 | None:intergenic |
| CAATGAGTGATGGCAAGATA+TGG | 0.428994 | 7_3:+84891949 | Msa1132030:CDS |
| AATCTTTGGAAAGAGTGCTT+TGG | 0.429279 | 7_3:+84892070 | Msa1132030:CDS |
| GATGATGCCAAGAAAGTTTG+TGG | 0.433802 | 7_3:+84891851 | Msa1132030:intron |
| TCCATCCTTTGTTGTTGTCA+TGG | 0.443657 | 7_3:+84892659 | Msa1132030:CDS |
| CCATCCTTTGTTGTTGTCAT+GGG | 0.446533 | 7_3:+84892660 | Msa1132030:CDS |
| GGTCTGCTAGGTACTCTATC+AGG | 0.476846 | 7_3:+84893270 | Msa1132030:CDS |
| AGATATGGTTTGAGAAGGGT+TGG | 0.481735 | 7_3:+84891964 | Msa1132030:CDS |
| TCTATCAGGATGTGCGCTAA+AGG | 0.492943 | 7_3:+84893284 | Msa1132030:CDS |
| AAGGACAATAACTTGAAAGT+TGG | 0.499244 | 7_3:+84893347 | Msa1132030:CDS |
| AGGTTTATTTCCTTGACCAT+TGG | 0.507461 | 7_3:-84892135 | None:intergenic |
| ATTGTAGAGCAGCTCAAAAG+AGG | 0.511221 | 7_3:+84892171 | Msa1132030:CDS |
| CAAGGAAATAAACCTCCAAA+TGG | 0.511352 | 7_3:+84892143 | Msa1132030:CDS |
| TTAAATTTGGCAATGAGTGA+TGG | 0.512239 | 7_3:+84891939 | Msa1132030:CDS |
| TTACAAGGTTTCCTTGGAGA+AGG | 0.514232 | 7_3:-84891198 | None:intergenic |
| ATAGGAGAGTTTGGTCTGCT+AGG | 0.518856 | 7_3:+84893258 | Msa1132030:CDS |
| TTTGCAGAGCATCACTCTCT+AGG | 0.540785 | 7_3:+84891993 | Msa1132030:CDS |
| TGGCAAGATATGGTTTGAGA+AGG | 0.555350 | 7_3:+84891959 | Msa1132030:CDS |
| CTAAAATTTGAACTCACAAG+TGG | 0.566527 | 7_3:+84893308 | Msa1132030:CDS |
| TGAACTCACAAGTGGATGGA+AGG | 0.567593 | 7_3:+84893316 | Msa1132030:CDS |
| CCCATGACAACAACAAAGGA+TGG | 0.571041 | 7_3:-84892660 | None:intergenic |
| TCAAATTGATATTCGTCCAA+AGG | 0.584086 | 7_3:+84892286 | Msa1132030:CDS |
| ATATGTCTAGAGACTCCAAA+TGG | 0.586498 | 7_3:+84891903 | Msa1132030:CDS |
| ACATTGTCGATGAAATTCAA+AGG | 0.588513 | 7_3:-84892207 | None:intergenic |
| TGCAGCTTACCGGAAGAAAG+TGG | 0.589285 | 7_3:-84892701 | None:intergenic |
| ATTTGGAAAATCGCAGAAGG+TGG | 0.595133 | 7_3:+84892256 | Msa1132030:CDS |
| GAGCATCACTCTCTAGGTCA+TGG | 0.595626 | 7_3:+84891999 | Msa1132030:CDS |
| AATTTGAACTCACAAGTGGA+TGG | 0.599548 | 7_3:+84893312 | Msa1132030:CDS |
| TTTGATTTGAATAAGAAGAG+AGG | 0.602796 | 7_3:+84893212 | Msa1132030:CDS |
| GGCAAGATATGGTTTGAGAA+GGG | 0.606783 | 7_3:+84891960 | Msa1132030:CDS |
| GTTACTCAAAACCTTCTCCA+AGG | 0.614774 | 7_3:+84891187 | Msa1132030:CDS |
| AAAATTTGGAAAATCGCAGA+AGG | 0.630701 | 7_3:+84892253 | Msa1132030:CDS |
| TGGATGGAAGGCATTTGCAA+AGG | 0.640290 | 7_3:+84893328 | Msa1132030:CDS |
| TGTGTCTTACAAAACAAGGA+TGG | 0.644962 | 7_3:-84893188 | None:intergenic |
| AAAGTGTGTCTTACAAAACA+AGG | 0.647663 | 7_3:-84893192 | None:intergenic |
| TTGTCGATGAAATTCAAAGG+AGG | 0.673392 | 7_3:-84892204 | None:intergenic |
| ATATTTGACGATAATCTTCG+GGG | 0.677065 | 7_3:-84892539 | None:intergenic |
| TGCACCCATGACAACAACAA+AGG | 0.693553 | 7_3:-84892664 | None:intergenic |
| CATGGCTAGTGAAATTGCTG+AGG | 0.726199 | 7_3:+84891135 | Msa1132030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAAAAAGCATAAAAATA+AGG | - | chr7_3:84891510-84891529 | None:intergenic | 10.0% |
| !!! | ATATTATTTTACATTACTTT+AGG | - | chr7_3:84891789-84891808 | None:intergenic | 10.0% |
| !! | TTATATCATTCATATTAATA+TGG | + | chr7_3:84891813-84891832 | Msa1132030:intron | 10.0% |
| !!! | ATATTATCATTTTTATTTTC+TGG | + | chr7_3:84892392-84892411 | Msa1132030:intron | 10.0% |
| !! | AAAAAAAAAAAAAAACCAAA+GGG | - | chr7_3:84893125-84893144 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAAACCAA+AGG | - | chr7_3:84893126-84893145 | None:intergenic | 10.0% |
| !!! | TTAAAAAAAGCATAAAAATA+AGG | - | chr7_3:84891510-84891529 | None:intergenic | 10.0% |
| !!! | ATATTATTTTACATTACTTT+AGG | - | chr7_3:84891789-84891808 | None:intergenic | 10.0% |
| !! | TTATATCATTCATATTAATA+TGG | + | chr7_3:84891813-84891832 | Msa1132030:intron | 10.0% |
| !!! | ATATTATCATTTTTATTTTC+TGG | + | chr7_3:84892392-84892411 | Msa1132030:intron | 10.0% |
| !! | AAAAAAAAAAAAAAACCAAA+GGG | - | chr7_3:84893125-84893144 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAAACCAA+AGG | - | chr7_3:84893126-84893145 | None:intergenic | 10.0% |
| !!! | GGTGTTTTTATTTTTATTTT+TGG | - | chr7_3:84893104-84893123 | None:intergenic | 15.0% |
| !!! | GGTGTTTTTATTTTTATTTT+TGG | - | chr7_3:84893104-84893123 | None:intergenic | 15.0% |
| !! | ATTCAATTGTTCTGTAATTT+AGG | - | chr7_3:84891462-84891481 | None:intergenic | 20.0% |
| !! | TGCAAAATGGAAATTAAATT+TGG | + | chr7_3:84891926-84891945 | Msa1132030:CDS | 20.0% |
| !! | ATAAAAATAAAAACACCCTT+TGG | + | chr7_3:84893107-84893126 | Msa1132030:intron | 20.0% |
| !! | ATTCAATTGTTCTGTAATTT+AGG | - | chr7_3:84891462-84891481 | None:intergenic | 20.0% |
| !! | TGCAAAATGGAAATTAAATT+TGG | + | chr7_3:84891926-84891945 | Msa1132030:CDS | 20.0% |
| !! | ATAAAAATAAAAACACCCTT+TGG | + | chr7_3:84893107-84893126 | Msa1132030:intron | 20.0% |
| ! | TAACTATGATCTTGAAAAAG+TGG | - | chr7_3:84891171-84891190 | None:intergenic | 25.0% |
| ! | AACATCAACAAAGAATCTAA+AGG | - | chr7_3:84891225-84891244 | None:intergenic | 25.0% |
| !!! | TTTTAAGAACGTTTCTCTTT+AGG | + | chr7_3:84891524-84891543 | Msa1132030:intron | 25.0% |
| !! | TCGATTACTTGTTAAAAACT+TGG | + | chr7_3:84891656-84891675 | Msa1132030:intron | 25.0% |
| !! | CGATTACTTGTTAAAAACTT+GGG | + | chr7_3:84891657-84891676 | Msa1132030:intron | 25.0% |
| ! | ATGGGACAAATTGAATAAAT+TGG | - | chr7_3:84891730-84891749 | None:intergenic | 25.0% |
| ! | TTTATTCAATTTGTCCCATT+TGG | + | chr7_3:84891731-84891750 | Msa1132030:intron | 25.0% |
| !! | TACATTACTTTAGGAAATAC+TGG | - | chr7_3:84891780-84891799 | None:intergenic | 25.0% |
| !! | TATTTTTCCACAAACTTTCT+TGG | - | chr7_3:84891861-84891880 | None:intergenic | 25.0% |
| ! | AGAAAGTTTGTGGAAAAATA+TGG | + | chr7_3:84891861-84891880 | Msa1132030:CDS | 25.0% |
| ! | TTTGTGGAAAAATATGGAAA+AGG | + | chr7_3:84891867-84891886 | Msa1132030:CDS | 25.0% |
| ! | TGAAAAAACTTCCAAATTTG+AGG | + | chr7_3:84892043-84892062 | Msa1132030:CDS | 25.0% |
| ! | AAAGATTTGTACCTCAAATT+TGG | - | chr7_3:84892057-84892076 | None:intergenic | 25.0% |
| !! | AAATTTGAGGTACAAATCTT+TGG | + | chr7_3:84892056-84892075 | Msa1132030:CDS | 25.0% |
| ! | GAATATAAAAAGTTCTCCAA+TGG | + | chr7_3:84892119-84892138 | Msa1132030:CDS | 25.0% |
| !!! | TTTTATTTTCTGGAGTGTTA+AGG | + | chr7_3:84892402-84892421 | Msa1132030:intron | 25.0% |
| !!! | TTTATTTTCTGGAGTGTTAA+GGG | + | chr7_3:84892403-84892422 | Msa1132030:intron | 25.0% |
| ! | ACATATTTGACGATAATCTT+CGG | - | chr7_3:84892544-84892563 | None:intergenic | 25.0% |
| !! | TGCAAAATTGGAACATTTTA+AGG | - | chr7_3:84892568-84892587 | None:intergenic | 25.0% |
| !! | TTAAAATGTTCCAATTTTGC+AGG | + | chr7_3:84892567-84892586 | Msa1132030:CDS | 25.0% |
| ! | AGTAGTCAACAACAATAAAA+AGG | + | chr7_3:84892754-84892773 | Msa1132030:intron | 25.0% |
| !! | CATTTGCATTTTCTATTGTT+TGG | + | chr7_3:84893156-84893175 | Msa1132030:intron | 25.0% |
| !!! | TTTGATTTGAATAAGAAGAG+AGG | + | chr7_3:84893212-84893231 | Msa1132030:CDS | 25.0% |
| ! | TAACTATGATCTTGAAAAAG+TGG | - | chr7_3:84891171-84891190 | None:intergenic | 25.0% |
| ! | AACATCAACAAAGAATCTAA+AGG | - | chr7_3:84891225-84891244 | None:intergenic | 25.0% |
| !!! | TTTTAAGAACGTTTCTCTTT+AGG | + | chr7_3:84891524-84891543 | Msa1132030:intron | 25.0% |
| !! | TCGATTACTTGTTAAAAACT+TGG | + | chr7_3:84891656-84891675 | Msa1132030:intron | 25.0% |
| !! | CGATTACTTGTTAAAAACTT+GGG | + | chr7_3:84891657-84891676 | Msa1132030:intron | 25.0% |
| ! | ATGGGACAAATTGAATAAAT+TGG | - | chr7_3:84891730-84891749 | None:intergenic | 25.0% |
| ! | TTTATTCAATTTGTCCCATT+TGG | + | chr7_3:84891731-84891750 | Msa1132030:intron | 25.0% |
| !! | TACATTACTTTAGGAAATAC+TGG | - | chr7_3:84891780-84891799 | None:intergenic | 25.0% |
| !! | TATTTTTCCACAAACTTTCT+TGG | - | chr7_3:84891861-84891880 | None:intergenic | 25.0% |
| ! | AGAAAGTTTGTGGAAAAATA+TGG | + | chr7_3:84891861-84891880 | Msa1132030:CDS | 25.0% |
| ! | TTTGTGGAAAAATATGGAAA+AGG | + | chr7_3:84891867-84891886 | Msa1132030:CDS | 25.0% |
| ! | TGAAAAAACTTCCAAATTTG+AGG | + | chr7_3:84892043-84892062 | Msa1132030:CDS | 25.0% |
| ! | AAAGATTTGTACCTCAAATT+TGG | - | chr7_3:84892057-84892076 | None:intergenic | 25.0% |
| !! | AAATTTGAGGTACAAATCTT+TGG | + | chr7_3:84892056-84892075 | Msa1132030:CDS | 25.0% |
| ! | GAATATAAAAAGTTCTCCAA+TGG | + | chr7_3:84892119-84892138 | Msa1132030:CDS | 25.0% |
| !!! | TTTTATTTTCTGGAGTGTTA+AGG | + | chr7_3:84892402-84892421 | Msa1132030:intron | 25.0% |
| !!! | TTTATTTTCTGGAGTGTTAA+GGG | + | chr7_3:84892403-84892422 | Msa1132030:intron | 25.0% |
| ! | ACATATTTGACGATAATCTT+CGG | - | chr7_3:84892544-84892563 | None:intergenic | 25.0% |
| !! | TGCAAAATTGGAACATTTTA+AGG | - | chr7_3:84892568-84892587 | None:intergenic | 25.0% |
| !! | TTAAAATGTTCCAATTTTGC+AGG | + | chr7_3:84892567-84892586 | Msa1132030:CDS | 25.0% |
| ! | AGTAGTCAACAACAATAAAA+AGG | + | chr7_3:84892754-84892773 | Msa1132030:intron | 25.0% |
| !! | CATTTGCATTTTCTATTGTT+TGG | + | chr7_3:84893156-84893175 | Msa1132030:intron | 25.0% |
| !!! | TTTGATTTGAATAAGAAGAG+AGG | + | chr7_3:84893212-84893231 | Msa1132030:CDS | 25.0% |
| ATGATCTTGAAAAAGTGGAT+TGG | - | chr7_3:84891166-84891185 | None:intergenic | 30.0% | |
| AAAGAATCTAAAGGCTTACA+AGG | - | chr7_3:84891216-84891235 | None:intergenic | 30.0% | |
| ! | TAAAACAGAGCTGTCAATTT+TGG | + | chr7_3:84891415-84891434 | Msa1132030:intron | 30.0% |
| !! | TCAATTTTGGTCAAACCTAA+TGG | + | chr7_3:84891428-84891447 | Msa1132030:intron | 30.0% |
| ! | AACAATTGAATCATTTTCGC+CGG | + | chr7_3:84891471-84891490 | Msa1132030:intron | 30.0% |
| TCCAGGAGTTAATTGTATTA+GGG | - | chr7_3:84891572-84891591 | None:intergenic | 30.0% | |
| TTCCAGGAGTTAATTGTATT+AGG | - | chr7_3:84891573-84891592 | None:intergenic | 30.0% | |
| TACCAGATTATGTTTATTCC+AGG | - | chr7_3:84891589-84891608 | None:intergenic | 30.0% | |
| TAACTACCTGATGTGTATTT+AGG | + | chr7_3:84891611-84891630 | Msa1132030:intron | 30.0% | |
| AAGAAACCTAAATACACATC+AGG | - | chr7_3:84891620-84891639 | None:intergenic | 30.0% | |
| ! | AATTTCCATTTTGCACCATT+TGG | - | chr7_3:84891921-84891940 | None:intergenic | 30.0% |
| TTAAATTTGGCAATGAGTGA+TGG | + | chr7_3:84891939-84891958 | Msa1132030:CDS | 30.0% | |
| CATATCTAAAAAGCAGAAGA+TGG | - | chr7_3:84892025-84892044 | None:intergenic | 30.0% | |
| ACATTGTCGATGAAATTCAA+AGG | - | chr7_3:84892210-84892229 | None:intergenic | 30.0% | |
| TTTCATCGACAATGTGAAAT+TGG | + | chr7_3:84892215-84892234 | Msa1132030:CDS | 30.0% | |
| AGCAGTAGTTGTGTAAAATT+TGG | + | chr7_3:84892239-84892258 | Msa1132030:CDS | 30.0% | |
| AAAATTTGGAAAATCGCAGA+AGG | + | chr7_3:84892253-84892272 | Msa1132030:CDS | 30.0% | |
| TCAAATTGATATTCGTCCAA+AGG | + | chr7_3:84892286-84892305 | Msa1132030:CDS | 30.0% | |
| ATATTTGACGATAATCTTCG+GGG | - | chr7_3:84892542-84892561 | None:intergenic | 30.0% | |
| CATATTTGACGATAATCTTC+GGG | - | chr7_3:84892543-84892562 | None:intergenic | 30.0% | |
| ACATGTTTCAATATCGAACA+AGG | - | chr7_3:84892853-84892872 | None:intergenic | 30.0% | |
| ! | ATCAATTTTACCGTGACAAT+GGG | - | chr7_3:84892963-84892982 | None:intergenic | 30.0% |
| ! | AATCAATTTTACCGTGACAA+TGG | - | chr7_3:84892964-84892983 | None:intergenic | 30.0% |
| !! | TTTTTGGTGATCAAAAGACT+GGG | - | chr7_3:84893088-84893107 | None:intergenic | 30.0% |
| !!! | ATTTTTGGTGATCAAAAGAC+TGG | - | chr7_3:84893089-84893108 | None:intergenic | 30.0% |
| AAAGTGTGTCTTACAAAACA+AGG | - | chr7_3:84893195-84893214 | None:intergenic | 30.0% | |
| CTAAAATTTGAACTCACAAG+TGG | + | chr7_3:84893308-84893327 | Msa1132030:CDS | 30.0% | |
| AAGGACAATAACTTGAAAGT+TGG | + | chr7_3:84893347-84893366 | Msa1132030:CDS | 30.0% | |
| ATGATCTTGAAAAAGTGGAT+TGG | - | chr7_3:84891166-84891185 | None:intergenic | 30.0% | |
| AAAGAATCTAAAGGCTTACA+AGG | - | chr7_3:84891216-84891235 | None:intergenic | 30.0% | |
| ! | TAAAACAGAGCTGTCAATTT+TGG | + | chr7_3:84891415-84891434 | Msa1132030:intron | 30.0% |
| !! | TCAATTTTGGTCAAACCTAA+TGG | + | chr7_3:84891428-84891447 | Msa1132030:intron | 30.0% |
| ! | AACAATTGAATCATTTTCGC+CGG | + | chr7_3:84891471-84891490 | Msa1132030:intron | 30.0% |
| TCCAGGAGTTAATTGTATTA+GGG | - | chr7_3:84891572-84891591 | None:intergenic | 30.0% | |
| TTCCAGGAGTTAATTGTATT+AGG | - | chr7_3:84891573-84891592 | None:intergenic | 30.0% | |
| TACCAGATTATGTTTATTCC+AGG | - | chr7_3:84891589-84891608 | None:intergenic | 30.0% | |
| TAACTACCTGATGTGTATTT+AGG | + | chr7_3:84891611-84891630 | Msa1132030:intron | 30.0% | |
| AAGAAACCTAAATACACATC+AGG | - | chr7_3:84891620-84891639 | None:intergenic | 30.0% | |
| ! | AATTTCCATTTTGCACCATT+TGG | - | chr7_3:84891921-84891940 | None:intergenic | 30.0% |
| TTAAATTTGGCAATGAGTGA+TGG | + | chr7_3:84891939-84891958 | Msa1132030:CDS | 30.0% | |
| CATATCTAAAAAGCAGAAGA+TGG | - | chr7_3:84892025-84892044 | None:intergenic | 30.0% | |
| ACATTGTCGATGAAATTCAA+AGG | - | chr7_3:84892210-84892229 | None:intergenic | 30.0% | |
| TTTCATCGACAATGTGAAAT+TGG | + | chr7_3:84892215-84892234 | Msa1132030:CDS | 30.0% | |
| AGCAGTAGTTGTGTAAAATT+TGG | + | chr7_3:84892239-84892258 | Msa1132030:CDS | 30.0% | |
| AAAATTTGGAAAATCGCAGA+AGG | + | chr7_3:84892253-84892272 | Msa1132030:CDS | 30.0% | |
| TCAAATTGATATTCGTCCAA+AGG | + | chr7_3:84892286-84892305 | Msa1132030:CDS | 30.0% | |
| ATATTTGACGATAATCTTCG+GGG | - | chr7_3:84892542-84892561 | None:intergenic | 30.0% | |
| CATATTTGACGATAATCTTC+GGG | - | chr7_3:84892543-84892562 | None:intergenic | 30.0% | |
| ACATGTTTCAATATCGAACA+AGG | - | chr7_3:84892853-84892872 | None:intergenic | 30.0% | |
| ! | ATCAATTTTACCGTGACAAT+GGG | - | chr7_3:84892963-84892982 | None:intergenic | 30.0% |
| ! | AATCAATTTTACCGTGACAA+TGG | - | chr7_3:84892964-84892983 | None:intergenic | 30.0% |
| !! | TTTTTGGTGATCAAAAGACT+GGG | - | chr7_3:84893088-84893107 | None:intergenic | 30.0% |
| !!! | ATTTTTGGTGATCAAAAGAC+TGG | - | chr7_3:84893089-84893108 | None:intergenic | 30.0% |
| AAAGTGTGTCTTACAAAACA+AGG | - | chr7_3:84893195-84893214 | None:intergenic | 30.0% | |
| CTAAAATTTGAACTCACAAG+TGG | + | chr7_3:84893308-84893327 | Msa1132030:CDS | 30.0% | |
| AAGGACAATAACTTGAAAGT+TGG | + | chr7_3:84893347-84893366 | Msa1132030:CDS | 30.0% | |
| AGAAAAGAATAGAGAGGTTC+AGG | - | chr7_3:84891339-84891358 | None:intergenic | 35.0% | |
| CCTGTTAGAAAAGAATAGAG+AGG | - | chr7_3:84891345-84891364 | None:intergenic | 35.0% | |
| ! | CCTCTCTATTCTTTTCTAAC+AGG | + | chr7_3:84891342-84891361 | Msa1132030:intron | 35.0% |
| CAGGAGTTAATTGTATTAGG+GGG | - | chr7_3:84891570-84891589 | None:intergenic | 35.0% | |
| CCAGGAGTTAATTGTATTAG+GGG | - | chr7_3:84891571-84891590 | None:intergenic | 35.0% | |
| CTCCTGGAATAAACATAATC+TGG | + | chr7_3:84891584-84891603 | Msa1132030:intron | 35.0% | |
| ! | GTCTCTAGACATATAGCTTT+TGG | - | chr7_3:84891897-84891916 | None:intergenic | 35.0% |
| ATATGTCTAGAGACTCCAAA+TGG | + | chr7_3:84891903-84891922 | Msa1132030:CDS | 35.0% | |
| !! | AATCTTTGGAAAGAGTGCTT+TGG | + | chr7_3:84892070-84892089 | Msa1132030:CDS | 35.0% |
| AAAAAGTTCTCCAATGGTCA+AGG | + | chr7_3:84892125-84892144 | Msa1132030:CDS | 35.0% | |
| AGGTTTATTTCCTTGACCAT+TGG | - | chr7_3:84892138-84892157 | None:intergenic | 35.0% | |
| CAAGGAAATAAACCTCCAAA+TGG | + | chr7_3:84892143-84892162 | Msa1132030:CDS | 35.0% | |
| ! | CTACAATTTTCACCATTTGG+AGG | - | chr7_3:84892158-84892177 | None:intergenic | 35.0% |
| ! | GCTCTACAATTTTCACCATT+TGG | - | chr7_3:84892161-84892180 | None:intergenic | 35.0% |
| TTGTCGATGAAATTCAAAGG+AGG | - | chr7_3:84892207-84892226 | None:intergenic | 35.0% | |
| GACGTAAAATCGTATACCTT+TGG | - | chr7_3:84892305-84892324 | None:intergenic | 35.0% | |
| TTTGCATCTCATGTTCTAGT+TGG | + | chr7_3:84892483-84892502 | Msa1132030:intron | 35.0% | |
| !! | CACTTGTTTTCCTGCAAAAT+TGG | - | chr7_3:84892580-84892599 | None:intergenic | 35.0% |
| AATGTTTCTTTGCAGCTTAC+CGG | - | chr7_3:84892714-84892733 | None:intergenic | 35.0% | |
| GTAAGCTGCAAAGAAACATT+TGG | + | chr7_3:84892714-84892733 | Msa1132030:intron | 35.0% | |
| TGTGTCTTACAAAACAAGGA+TGG | - | chr7_3:84893191-84893210 | None:intergenic | 35.0% | |
| !! | TTCAACTTCAGGTGTTGAAT+AGG | + | chr7_3:84893240-84893259 | Msa1132030:CDS | 35.0% |
| AATTTGAACTCACAAGTGGA+TGG | + | chr7_3:84893312-84893331 | Msa1132030:CDS | 35.0% | |
| AGAAAAGAATAGAGAGGTTC+AGG | - | chr7_3:84891339-84891358 | None:intergenic | 35.0% | |
| CCTGTTAGAAAAGAATAGAG+AGG | - | chr7_3:84891345-84891364 | None:intergenic | 35.0% | |
| ! | CCTCTCTATTCTTTTCTAAC+AGG | + | chr7_3:84891342-84891361 | Msa1132030:intron | 35.0% |
| CAGGAGTTAATTGTATTAGG+GGG | - | chr7_3:84891570-84891589 | None:intergenic | 35.0% | |
| CCAGGAGTTAATTGTATTAG+GGG | - | chr7_3:84891571-84891590 | None:intergenic | 35.0% | |
| CTCCTGGAATAAACATAATC+TGG | + | chr7_3:84891584-84891603 | Msa1132030:intron | 35.0% | |
| ! | GTCTCTAGACATATAGCTTT+TGG | - | chr7_3:84891897-84891916 | None:intergenic | 35.0% |
| ATATGTCTAGAGACTCCAAA+TGG | + | chr7_3:84891903-84891922 | Msa1132030:CDS | 35.0% | |
| !! | AATCTTTGGAAAGAGTGCTT+TGG | + | chr7_3:84892070-84892089 | Msa1132030:CDS | 35.0% |
| AAAAAGTTCTCCAATGGTCA+AGG | + | chr7_3:84892125-84892144 | Msa1132030:CDS | 35.0% | |
| AGGTTTATTTCCTTGACCAT+TGG | - | chr7_3:84892138-84892157 | None:intergenic | 35.0% | |
| CAAGGAAATAAACCTCCAAA+TGG | + | chr7_3:84892143-84892162 | Msa1132030:CDS | 35.0% | |
| ! | CTACAATTTTCACCATTTGG+AGG | - | chr7_3:84892158-84892177 | None:intergenic | 35.0% |
| ! | GCTCTACAATTTTCACCATT+TGG | - | chr7_3:84892161-84892180 | None:intergenic | 35.0% |
| TTGTCGATGAAATTCAAAGG+AGG | - | chr7_3:84892207-84892226 | None:intergenic | 35.0% | |
| GACGTAAAATCGTATACCTT+TGG | - | chr7_3:84892305-84892324 | None:intergenic | 35.0% | |
| TTTGCATCTCATGTTCTAGT+TGG | + | chr7_3:84892483-84892502 | Msa1132030:intron | 35.0% | |
| !! | CACTTGTTTTCCTGCAAAAT+TGG | - | chr7_3:84892580-84892599 | None:intergenic | 35.0% |
| AATGTTTCTTTGCAGCTTAC+CGG | - | chr7_3:84892714-84892733 | None:intergenic | 35.0% | |
| GTAAGCTGCAAAGAAACATT+TGG | + | chr7_3:84892714-84892733 | Msa1132030:intron | 35.0% | |
| TGTGTCTTACAAAACAAGGA+TGG | - | chr7_3:84893191-84893210 | None:intergenic | 35.0% | |
| !! | TTCAACTTCAGGTGTTGAAT+AGG | + | chr7_3:84893240-84893259 | Msa1132030:CDS | 35.0% |
| AATTTGAACTCACAAGTGGA+TGG | + | chr7_3:84893312-84893331 | Msa1132030:CDS | 35.0% | |
| GTTACTCAAAACCTTCTCCA+AGG | + | chr7_3:84891187-84891206 | Msa1132030:CDS | 40.0% | |
| TTACAAGGTTTCCTTGGAGA+AGG | - | chr7_3:84891201-84891220 | None:intergenic | 40.0% | |
| AAAGGCTTACAAGGTTTCCT+TGG | - | chr7_3:84891207-84891226 | None:intergenic | 40.0% | |
| AGAATAGAGAGGTTCAGGTA+AGG | - | chr7_3:84891334-84891353 | None:intergenic | 40.0% | |
| ! | ATTTAGGAGTGCAGTCCATT+AGG | - | chr7_3:84891446-84891465 | None:intergenic | 40.0% |
| ! | ATTGAATCATTTTCGCCGGT+TGG | + | chr7_3:84891475-84891494 | Msa1132030:intron | 40.0% |
| CCCCTAATACAATTAACTCC+TGG | + | chr7_3:84891568-84891587 | Msa1132030:intron | 40.0% | |
| ! | AAAACACACCAGTTTGGGTT+TGG | - | chr7_3:84891688-84891707 | None:intergenic | 40.0% |
| ! | AACCCAAACTGGTGTGTTTT+AGG | + | chr7_3:84891688-84891707 | Msa1132030:intron | 40.0% |
| AGCCTAAAACACACCAGTTT+GGG | - | chr7_3:84891693-84891712 | None:intergenic | 40.0% | |
| TAGCCTAAAACACACCAGTT+TGG | - | chr7_3:84891694-84891713 | None:intergenic | 40.0% | |
| TCAATTTGTCCCATTTGGCT+AGG | + | chr7_3:84891736-84891755 | Msa1132030:intron | 40.0% | |
| CAATTTGTCCCATTTGGCTA+GGG | + | chr7_3:84891737-84891756 | Msa1132030:intron | 40.0% | |
| AATTTGTCCCATTTGGCTAG+GGG | + | chr7_3:84891738-84891757 | Msa1132030:intron | 40.0% | |
| GATGATGCCAAGAAAGTTTG+TGG | + | chr7_3:84891851-84891870 | Msa1132030:intron | 40.0% | |
| AGACTCCAAATGGTGCAAAA+TGG | + | chr7_3:84891913-84891932 | Msa1132030:CDS | 40.0% | |
| CAATGAGTGATGGCAAGATA+TGG | + | chr7_3:84891949-84891968 | Msa1132030:CDS | 40.0% | |
| TGGCAAGATATGGTTTGAGA+AGG | + | chr7_3:84891959-84891978 | Msa1132030:CDS | 40.0% | |
| GGCAAGATATGGTTTGAGAA+GGG | + | chr7_3:84891960-84891979 | Msa1132030:CDS | 40.0% | |
| AGATATGGTTTGAGAAGGGT+TGG | + | chr7_3:84891964-84891983 | Msa1132030:CDS | 40.0% | |
| ATTGTAGAGCAGCTCAAAAG+AGG | + | chr7_3:84892171-84892190 | Msa1132030:CDS | 40.0% | |
| ATTTGGAAAATCGCAGAAGG+TGG | + | chr7_3:84892256-84892275 | Msa1132030:CDS | 40.0% | |
| TACGTCTTCTTCATTGTGTC+AGG | + | chr7_3:84892319-84892338 | Msa1132030:CDS | 40.0% | |
| !!! | TTTTCTGGAGTGTTAAGGGA+TGG | + | chr7_3:84892407-84892426 | Msa1132030:intron | 40.0% |
| !! | TCCATCCTTTGTTGTTGTCA+TGG | + | chr7_3:84892659-84892678 | Msa1132030:CDS | 40.0% |
| !! | CCATCCTTTGTTGTTGTCAT+GGG | + | chr7_3:84892660-84892679 | Msa1132030:CDS | 40.0% |
| ACATCAACACATACGATCGA+AGG | + | chr7_3:84892804-84892823 | Msa1132030:intron | 40.0% | |
| ACAAGGACATGTGTCTAACA+AGG | - | chr7_3:84892836-84892855 | None:intergenic | 40.0% | |
| !! | TACATAATGTGGCACTGACA+CGG | - | chr7_3:84892939-84892958 | None:intergenic | 40.0% |
| !! | TGACAATGGGCTACATAATG+TGG | - | chr7_3:84892950-84892969 | None:intergenic | 40.0% |
| CATTATGTAGCCCATTGTCA+CGG | + | chr7_3:84892950-84892969 | Msa1132030:intron | 40.0% | |
| GAGAGGAGATATTCAACTTC+AGG | + | chr7_3:84893229-84893248 | Msa1132030:CDS | 40.0% | |
| !! | AGGTGTTGAATAGGAGAGTT+TGG | + | chr7_3:84893249-84893268 | Msa1132030:CDS | 40.0% |
| GTTACTCAAAACCTTCTCCA+AGG | + | chr7_3:84891187-84891206 | Msa1132030:CDS | 40.0% | |
| TTACAAGGTTTCCTTGGAGA+AGG | - | chr7_3:84891201-84891220 | None:intergenic | 40.0% | |
| AAAGGCTTACAAGGTTTCCT+TGG | - | chr7_3:84891207-84891226 | None:intergenic | 40.0% | |
| AGAATAGAGAGGTTCAGGTA+AGG | - | chr7_3:84891334-84891353 | None:intergenic | 40.0% | |
| ! | ATTTAGGAGTGCAGTCCATT+AGG | - | chr7_3:84891446-84891465 | None:intergenic | 40.0% |
| ! | ATTGAATCATTTTCGCCGGT+TGG | + | chr7_3:84891475-84891494 | Msa1132030:intron | 40.0% |
| CCCCTAATACAATTAACTCC+TGG | + | chr7_3:84891568-84891587 | Msa1132030:intron | 40.0% | |
| ! | AAAACACACCAGTTTGGGTT+TGG | - | chr7_3:84891688-84891707 | None:intergenic | 40.0% |
| ! | AACCCAAACTGGTGTGTTTT+AGG | + | chr7_3:84891688-84891707 | Msa1132030:intron | 40.0% |
| AGCCTAAAACACACCAGTTT+GGG | - | chr7_3:84891693-84891712 | None:intergenic | 40.0% | |
| TAGCCTAAAACACACCAGTT+TGG | - | chr7_3:84891694-84891713 | None:intergenic | 40.0% | |
| TCAATTTGTCCCATTTGGCT+AGG | + | chr7_3:84891736-84891755 | Msa1132030:intron | 40.0% | |
| CAATTTGTCCCATTTGGCTA+GGG | + | chr7_3:84891737-84891756 | Msa1132030:intron | 40.0% | |
| AATTTGTCCCATTTGGCTAG+GGG | + | chr7_3:84891738-84891757 | Msa1132030:intron | 40.0% | |
| GATGATGCCAAGAAAGTTTG+TGG | + | chr7_3:84891851-84891870 | Msa1132030:intron | 40.0% | |
| AGACTCCAAATGGTGCAAAA+TGG | + | chr7_3:84891913-84891932 | Msa1132030:CDS | 40.0% | |
| CAATGAGTGATGGCAAGATA+TGG | + | chr7_3:84891949-84891968 | Msa1132030:CDS | 40.0% | |
| TGGCAAGATATGGTTTGAGA+AGG | + | chr7_3:84891959-84891978 | Msa1132030:CDS | 40.0% | |
| GGCAAGATATGGTTTGAGAA+GGG | + | chr7_3:84891960-84891979 | Msa1132030:CDS | 40.0% | |
| AGATATGGTTTGAGAAGGGT+TGG | + | chr7_3:84891964-84891983 | Msa1132030:CDS | 40.0% | |
| ATTGTAGAGCAGCTCAAAAG+AGG | + | chr7_3:84892171-84892190 | Msa1132030:CDS | 40.0% | |
| ATTTGGAAAATCGCAGAAGG+TGG | + | chr7_3:84892256-84892275 | Msa1132030:CDS | 40.0% | |
| TACGTCTTCTTCATTGTGTC+AGG | + | chr7_3:84892319-84892338 | Msa1132030:CDS | 40.0% | |
| !!! | TTTTCTGGAGTGTTAAGGGA+TGG | + | chr7_3:84892407-84892426 | Msa1132030:intron | 40.0% |
| !! | TCCATCCTTTGTTGTTGTCA+TGG | + | chr7_3:84892659-84892678 | Msa1132030:CDS | 40.0% |
| !! | CCATCCTTTGTTGTTGTCAT+GGG | + | chr7_3:84892660-84892679 | Msa1132030:CDS | 40.0% |
| ACATCAACACATACGATCGA+AGG | + | chr7_3:84892804-84892823 | Msa1132030:intron | 40.0% | |
| ACAAGGACATGTGTCTAACA+AGG | - | chr7_3:84892836-84892855 | None:intergenic | 40.0% | |
| !! | TACATAATGTGGCACTGACA+CGG | - | chr7_3:84892939-84892958 | None:intergenic | 40.0% |
| !! | TGACAATGGGCTACATAATG+TGG | - | chr7_3:84892950-84892969 | None:intergenic | 40.0% |
| CATTATGTAGCCCATTGTCA+CGG | + | chr7_3:84892950-84892969 | Msa1132030:intron | 40.0% | |
| GAGAGGAGATATTCAACTTC+AGG | + | chr7_3:84893229-84893248 | Msa1132030:CDS | 40.0% | |
| !! | AGGTGTTGAATAGGAGAGTT+TGG | + | chr7_3:84893249-84893268 | Msa1132030:CDS | 40.0% |
| CATGGCTAGTGAAATTGCTG+AGG | + | chr7_3:84891135-84891154 | Msa1132030:CDS | 45.0% | |
| AGGCCCCACAAATATCTCTA+AGG | + | chr7_3:84891544-84891563 | Msa1132030:intron | 45.0% | |
| GGGCCTTAGAGATATTTGTG+GGG | - | chr7_3:84891550-84891569 | None:intergenic | 45.0% | |
| GGGGCCTTAGAGATATTTGT+GGG | - | chr7_3:84891551-84891570 | None:intergenic | 45.0% | |
| ACAAACTCCCCTAGCCAAAT+GGG | - | chr7_3:84891748-84891767 | None:intergenic | 45.0% | |
| ! | TTTGCAGAGCATCACTCTCT+AGG | + | chr7_3:84891993-84892012 | Msa1132030:CDS | 45.0% |
| CCCATGACAACAACAAAGGA+TGG | - | chr7_3:84892663-84892682 | None:intergenic | 45.0% | |
| TGCACCCATGACAACAACAA+AGG | - | chr7_3:84892667-84892686 | None:intergenic | 45.0% | |
| CGTTGAACACCACTTTCTTC+CGG | + | chr7_3:84892692-84892711 | Msa1132030:CDS | 45.0% | |
| ATAGGAGAGTTTGGTCTGCT+AGG | + | chr7_3:84893258-84893277 | Msa1132030:CDS | 45.0% | |
| TCTATCAGGATGTGCGCTAA+AGG | + | chr7_3:84893284-84893303 | Msa1132030:CDS | 45.0% | |
| TGAACTCACAAGTGGATGGA+AGG | + | chr7_3:84893316-84893335 | Msa1132030:CDS | 45.0% | |
| !! | TGGATGGAAGGCATTTGCAA+AGG | + | chr7_3:84893328-84893347 | Msa1132030:CDS | 45.0% |
| CATGGCTAGTGAAATTGCTG+AGG | + | chr7_3:84891135-84891154 | Msa1132030:CDS | 45.0% | |
| AGGCCCCACAAATATCTCTA+AGG | + | chr7_3:84891544-84891563 | Msa1132030:intron | 45.0% | |
| GGGCCTTAGAGATATTTGTG+GGG | - | chr7_3:84891550-84891569 | None:intergenic | 45.0% | |
| GGGGCCTTAGAGATATTTGT+GGG | - | chr7_3:84891551-84891570 | None:intergenic | 45.0% | |
| ACAAACTCCCCTAGCCAAAT+GGG | - | chr7_3:84891748-84891767 | None:intergenic | 45.0% | |
| ! | TTTGCAGAGCATCACTCTCT+AGG | + | chr7_3:84891993-84892012 | Msa1132030:CDS | 45.0% |
| CCCATGACAACAACAAAGGA+TGG | - | chr7_3:84892663-84892682 | None:intergenic | 45.0% | |
| TGCACCCATGACAACAACAA+AGG | - | chr7_3:84892667-84892686 | None:intergenic | 45.0% | |
| CGTTGAACACCACTTTCTTC+CGG | + | chr7_3:84892692-84892711 | Msa1132030:CDS | 45.0% | |
| ATAGGAGAGTTTGGTCTGCT+AGG | + | chr7_3:84893258-84893277 | Msa1132030:CDS | 45.0% | |
| TCTATCAGGATGTGCGCTAA+AGG | + | chr7_3:84893284-84893303 | Msa1132030:CDS | 45.0% | |
| TGAACTCACAAGTGGATGGA+AGG | + | chr7_3:84893316-84893335 | Msa1132030:CDS | 45.0% | |
| !! | TGGATGGAAGGCATTTGCAA+AGG | + | chr7_3:84893328-84893347 | Msa1132030:CDS | 45.0% |
| !! | ATAATTAATTGAAATATTAT+AGG | + | chr7_3:84893023-84893042 | Msa1132030:intron | 5.0% |
| !! | ATAATTAATTGAAATATTAT+AGG | + | chr7_3:84893023-84893042 | Msa1132030:intron | 5.0% |
| !! | TTTTCGCCGGTTGGTTCACT+CGG | + | chr7_3:84891484-84891503 | Msa1132030:intron | 50.0% |
| ATAAGGCCGAGTGAACCAAC+CGG | - | chr7_3:84891493-84891512 | None:intergenic | 50.0% | |
| GGGGGCCTTAGAGATATTTG+TGG | - | chr7_3:84891552-84891571 | None:intergenic | 50.0% | |
| CACAAACTCCCCTAGCCAAA+TGG | - | chr7_3:84891749-84891768 | None:intergenic | 50.0% | |
| TTTGGCTAGGGGAGTTTGTG+TGG | + | chr7_3:84891749-84891768 | Msa1132030:intron | 50.0% | |
| GAGCATCACTCTCTAGGTCA+TGG | + | chr7_3:84891999-84892018 | Msa1132030:CDS | 50.0% | |
| TGCAGCTTACCGGAAGAAAG+TGG | - | chr7_3:84892704-84892723 | None:intergenic | 50.0% | |
| GGTCTGCTAGGTACTCTATC+AGG | + | chr7_3:84893270-84893289 | Msa1132030:CDS | 50.0% | |
| !! | TTTTCGCCGGTTGGTTCACT+CGG | + | chr7_3:84891484-84891503 | Msa1132030:intron | 50.0% |
| ATAAGGCCGAGTGAACCAAC+CGG | - | chr7_3:84891493-84891512 | None:intergenic | 50.0% | |
| GGGGGCCTTAGAGATATTTG+TGG | - | chr7_3:84891552-84891571 | None:intergenic | 50.0% | |
| CACAAACTCCCCTAGCCAAA+TGG | - | chr7_3:84891749-84891768 | None:intergenic | 50.0% | |
| TTTGGCTAGGGGAGTTTGTG+TGG | + | chr7_3:84891749-84891768 | Msa1132030:intron | 50.0% | |
| GAGCATCACTCTCTAGGTCA+TGG | + | chr7_3:84891999-84892018 | Msa1132030:CDS | 50.0% | |
| TGCAGCTTACCGGAAGAAAG+TGG | - | chr7_3:84892704-84892723 | None:intergenic | 50.0% | |
| GGTCTGCTAGGTACTCTATC+AGG | + | chr7_3:84893270-84893289 | Msa1132030:CDS | 50.0% | |
| GGGCTTAGCCAAACCCAAAC+TGG | + | chr7_3:84891677-84891696 | Msa1132030:intron | 55.0% | |
| GGGCTTAGCCAAACCCAAAC+TGG | + | chr7_3:84891677-84891696 | Msa1132030:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 84891130 | 84893439 | 84891130 | ID=Msa1132030;Name=Msa1132030 |
| chr7_3 | mRNA | 84891130 | 84893439 | 84891130 | ID=Msa1132030-mRNA-1;Parent=Msa1132030;Name=Msa1132030-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|0.33|0.5|4|0|346 |
| chr7_3 | exon | 84891130 | 84891216 | 84891130 | ID=Msa1132030-mRNA-1:exon:25298;Parent=Msa1132030-mRNA-1 |
| chr7_3 | exon | 84891852 | 84892351 | 84891852 | ID=Msa1132030-mRNA-1:exon:25299;Parent=Msa1132030-mRNA-1 |
| chr7_3 | exon | 84892518 | 84892713 | 84892518 | ID=Msa1132030-mRNA-1:exon:25300;Parent=Msa1132030-mRNA-1 |
| chr7_3 | exon | 84893182 | 84893439 | 84893182 | ID=Msa1132030-mRNA-1:exon:25301;Parent=Msa1132030-mRNA-1 |
| chr7_3 | CDS | 84891130 | 84891216 | 84891130 | ID=Msa1132030-mRNA-1:cds;Parent=Msa1132030-mRNA-1 |
| chr7_3 | CDS | 84891852 | 84892351 | 84891852 | ID=Msa1132030-mRNA-1:cds;Parent=Msa1132030-mRNA-1 |
| chr7_3 | CDS | 84892518 | 84892713 | 84892518 | ID=Msa1132030-mRNA-1:cds;Parent=Msa1132030-mRNA-1 |
| chr7_3 | CDS | 84893182 | 84893439 | 84893182 | ID=Msa1132030-mRNA-1:cds;Parent=Msa1132030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
