Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132220 | XP_003610737.1 | 93.684 | 190 | 12 | 0 | 45 | 234 | 1 | 190 | 4.92e-124 | 359 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132220 | sp|P05332|YP20_BACLI | 32.941 | 170 | 103 | 3 | 65 | 228 | 8 | 172 | 2.21e-18 | 82.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132220 | G7K3P2 | 93.684 | 190 | 12 | 0 | 45 | 234 | 1 | 190 | 2.35e-124 | 359 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1132220 | TR | GNAT |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132220 | MtrunA17_Chr5g0394621 | 93.684 | 190 | 12 | 0 | 45 | 234 | 1 | 190 | 4.53e-128 | 359 |
| Msa1132220 | MtrunA17_Chr5g0394631 | 77.222 | 180 | 41 | 0 | 45 | 224 | 1 | 180 | 1.41e-94 | 282 |
| Msa1132220 | MtrunA17_Chr5g0394631 | 71.859 | 199 | 46 | 5 | 40 | 234 | 209 | 401 | 1.69e-89 | 269 |
| Msa1132220 | MtrunA17_Chr1g0204951 | 64.062 | 192 | 65 | 2 | 45 | 234 | 1 | 190 | 5.14e-84 | 248 |
| Msa1132220 | MtrunA17_Chr1g0204971 | 59.896 | 192 | 73 | 2 | 45 | 234 | 1 | 190 | 4.70e-78 | 233 |
| Msa1132220 | MtrunA17_Chr7g0273661 | 41.401 | 157 | 89 | 1 | 60 | 216 | 3 | 156 | 2.19e-41 | 139 |
| Msa1132220 | MtrunA17_Chr7g0223361 | 39.181 | 171 | 100 | 2 | 61 | 231 | 4 | 170 | 2.83e-36 | 126 |
| Msa1132220 | MtrunA17_Chr7g0223351 | 39.286 | 168 | 97 | 3 | 64 | 231 | 7 | 169 | 2.19e-35 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1132220 | AT2G32030.1 | 51.786 | 168 | 74 | 3 | 65 | 231 | 24 | 185 | 1.96e-58 | 183 |
| Msa1132220 | AT2G32020.1 | 51.190 | 168 | 75 | 2 | 65 | 231 | 19 | 180 | 2.38e-54 | 172 |
| Msa1132220 | AT3G22560.1 | 38.824 | 170 | 99 | 2 | 64 | 231 | 6 | 172 | 1.70e-35 | 124 |
Find 87 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAATCAATTCTCTCTTCTT+TGG | 0.250774 | 7_3:-85084074 | None:intergenic |
| CACCACTTCATTGGCCATTT+CGG | 0.269041 | 7_3:+85080241 | Msa1132220:five_prime_UTR |
| ATGTTCTAGGCTCTAAATAT+TGG | 0.292142 | 7_3:+85084356 | Msa1132220:CDS |
| TCCTTAGAACTCCCTCCTTT+TGG | 0.297796 | 7_3:-85084516 | None:intergenic |
| GCAGAACTTGGCTATGTTCT+AGG | 0.302641 | 7_3:+85084343 | Msa1132220:CDS |
| GGTAGTAAGCGGTGGTCATC+TGG | 0.312303 | 7_3:-85080175 | None:intergenic |
| TGTTCTAGGCTCTAAATATT+GGG | 0.316974 | 7_3:+85084357 | Msa1132220:CDS |
| ATACTATTCGTCATCTGATT+TGG | 0.325893 | 7_3:+85080308 | Msa1132220:five_prime_UTR |
| GAGTTCCCAAGAGCAGAATT+TGG | 0.329740 | 7_3:-85084173 | None:intergenic |
| ACTGACTGGAGTCCAGAATT+TGG | 0.329816 | 7_3:+85082240 | Msa1132220:CDS |
| GAAGGGCTCGAAGTGTGATT+TGG | 0.338927 | 7_3:-85084099 | None:intergenic |
| GCTCTAAATATTGGGGTAAA+GGG | 0.356917 | 7_3:+85084365 | Msa1132220:CDS |
| AAGTTCTGCACATTTGTTCC+TGG | 0.375848 | 7_3:-85084329 | None:intergenic |
| CTAAACAATTGAATTATAGT+TGG | 0.392086 | 7_3:-85084603 | None:intergenic |
| ATATAGCTACCAAGTTTCTA+TGG | 0.402105 | 7_3:+85084233 | Msa1132220:CDS |
| TGCATCAATGATCGTGCAAT+TGG | 0.403589 | 7_3:+85084268 | Msa1132220:CDS |
| AAGGGCTCGAAGTGTGATTT+GGG | 0.403990 | 7_3:-85084098 | None:intergenic |
| CCTTGGACAACACCAAATTC+TGG | 0.404506 | 7_3:-85082252 | None:intergenic |
| AAAGAGGAGATGACAGGAAA+TGG | 0.407670 | 7_3:+85082213 | Msa1132220:exon |
| TCCAAAAGGAGGGAGTTCTA+AGG | 0.410439 | 7_3:+85084515 | Msa1132220:CDS |
| GGCTCTAAATATTGGGGTAA+AGG | 0.422886 | 7_3:+85084364 | Msa1132220:CDS |
| CTGGGTACTAGAAGCATTCA+AGG | 0.423069 | 7_3:-85080156 | None:intergenic |
| AAGTGGCCAAATTCTGCTCT+TGG | 0.423997 | 7_3:+85084167 | Msa1132220:CDS |
| GTTGATGCCATCATCCTTGC+TGG | 0.429573 | 7_3:-85084200 | None:intergenic |
| TCCAATATTCAGGTTTAAAG+AGG | 0.429627 | 7_3:+85082197 | Msa1132220:intron |
| ACTTGTTGGTGTTGTTATCA+AGG | 0.443612 | 7_3:-85080404 | None:intergenic |
| TTCGTCATAATTGTCCGAAA+TGG | 0.444907 | 7_3:-85080255 | None:intergenic |
| ATCTAATATTACATAATTGT+CGG | 0.452292 | 7_3:+85080057 | Msa1132220:five_prime_UTR |
| TCAAACCGCCACCACTTCAT+TGG | 0.456004 | 7_3:+85080232 | Msa1132220:five_prime_UTR |
| TGCTGGGTCTCAAAGAGTGC+TGG | 0.460731 | 7_3:+85084480 | Msa1132220:CDS |
| CGCACATGCAGGCCACTGTA+TGG | 0.463415 | 7_3:+85080197 | Msa1132220:five_prime_UTR |
| AGTGGCCAAATTCTGCTCTT+GGG | 0.474265 | 7_3:+85084168 | Msa1132220:CDS |
| AGGAACAAATGTGCAGAACT+TGG | 0.475881 | 7_3:+85084331 | Msa1132220:CDS |
| AGGAAATATTTGTTCATGAA+AGG | 0.480337 | 7_3:+85084535 | Msa1132220:CDS |
| GTGAGTTGTCTTACTTGGAA+AGG | 0.487957 | 7_3:+85084431 | Msa1132220:CDS |
| GCTTGAAGCTTTAGTTGATG+TGG | 0.488968 | 7_3:+85084453 | Msa1132220:CDS |
| TGCTTTGCACCATAGAAACT+TGG | 0.496119 | 7_3:-85084242 | None:intergenic |
| GCTGGTAGGCTTGATACTAT+AGG | 0.498157 | 7_3:+85082276 | Msa1132220:CDS |
| TCGCAAACCAACTGCTATGA+AGG | 0.501349 | 7_3:-85080381 | None:intergenic |
| TTTGGTGTTGTCCAAGGTGC+TGG | 0.503958 | 7_3:+85082258 | Msa1132220:CDS |
| TTCTGACCTTGATGATCTCA+TGG | 0.505164 | 7_3:+85084126 | Msa1132220:CDS |
| CATCAAGGTCAGAAAGTTGA+AGG | 0.505953 | 7_3:-85084117 | None:intergenic |
| TGTTGTGAAACAAGTTGTTA+AGG | 0.509712 | 7_3:+85084399 | Msa1132220:CDS |
| CAGGAAATGGAACGACTGAC+TGG | 0.513505 | 7_3:+85082226 | Msa1132220:CDS |
| TTGTTCCTGGATTTATCACC+AGG | 0.514781 | 7_3:-85084316 | None:intergenic |
| CCAGAATTTGGTGTTGTCCA+AGG | 0.517209 | 7_3:+85082252 | Msa1132220:CDS |
| CAAAGAGTGCTGGAGAAAGC+TGG | 0.517457 | 7_3:+85084490 | Msa1132220:CDS |
| TTATTTACCTTCATAGCAGT+TGG | 0.518613 | 7_3:+85080374 | Msa1132220:five_prime_UTR |
| GAAAGAAACAAGTGTTGTGA+TGG | 0.524145 | 7_3:+85084021 | Msa1132220:CDS |
| GCATTCAAGGAAACAATAAG+AGG | 0.525366 | 7_3:-85080143 | None:intergenic |
| TTAGTTGATGTGGAAAATGC+TGG | 0.527178 | 7_3:+85084463 | Msa1132220:CDS |
| GTTCACCTGGTGATAAATCC+AGG | 0.542743 | 7_3:+85084311 | Msa1132220:CDS |
| TCTCTATCCTCAAGTTCACC+TGG | 0.545696 | 7_3:+85084298 | Msa1132220:CDS |
| CCGCTTACTACCGCACATGC+AGG | 0.555840 | 7_3:+85080186 | Msa1132220:five_prime_UTR |
| CATACAGTGGCCTGCATGTG+CGG | 0.559699 | 7_3:-85080196 | None:intergenic |
| CTCTACACCAGCAAGGATGA+TGG | 0.559987 | 7_3:+85084193 | Msa1132220:CDS |
| GAAAGCTGGTTTCCAAAAGG+AGG | 0.562242 | 7_3:+85084504 | Msa1132220:CDS |
| GTGTTGTCCAAGGTGCTGGT+AGG | 0.562496 | 7_3:+85082262 | Msa1132220:CDS |
| AGGTTTAAAGAGGAGATGAC+AGG | 0.564016 | 7_3:+85082207 | Msa1132220:intron |
| CTCTAAATATTGGGGTAAAG+GGG | 0.564900 | 7_3:+85084366 | Msa1132220:CDS |
| GCATCAATGATCGTGCAATT+GGG | 0.567462 | 7_3:+85084269 | Msa1132220:CDS |
| GGAGAAAGCTGGTTTCCAAA+AGG | 0.570344 | 7_3:+85084501 | Msa1132220:CDS |
| TTTATCACCAGGTGAACTTG+AGG | 0.573291 | 7_3:-85084305 | None:intergenic |
| TAGTTGATGTGGAAAATGCT+GGG | 0.573363 | 7_3:+85084464 | Msa1132220:CDS |
| TGGCGGTTTGACATTCTGTA+CGG | 0.576810 | 7_3:-85080220 | None:intergenic |
| TAATATTAGATTTCTCCTCA+AGG | 0.588094 | 7_3:-85080045 | None:intergenic |
| ATTCTCTCTTCTTTGGCACG+TGG | 0.591899 | 7_3:-85084067 | None:intergenic |
| TATCAAGCCTACCAGCACCT+TGG | 0.594122 | 7_3:-85082269 | None:intergenic |
| AATGGCCAATGAAGTGGTGG+CGG | 0.604749 | 7_3:-85080237 | None:intergenic |
| ACCTTGATGATCTCATGGTG+TGG | 0.606125 | 7_3:+85084131 | Msa1132220:CDS |
| AACTTGTTTCACAACACATG+TGG | 0.607173 | 7_3:-85084392 | None:intergenic |
| GTAGTAAGCGGTGGTCATCT+GGG | 0.607903 | 7_3:-85080174 | None:intergenic |
| GTTCTAGGCTCTAAATATTG+GGG | 0.619040 | 7_3:+85084358 | Msa1132220:CDS |
| GCATGTGCGGTAGTAAGCGG+TGG | 0.619881 | 7_3:-85080183 | None:intergenic |
| CAAGGAAACAATAAGAGGGT+CGG | 0.621578 | 7_3:-85080138 | None:intergenic |
| GTCCGAAATGGCCAATGAAG+TGG | 0.635284 | 7_3:-85080243 | None:intergenic |
| ATTTCGGACAATTATGACGA+AGG | 0.636122 | 7_3:+85080257 | Msa1132220:five_prime_UTR |
| CATTCAAGGAAACAATAAGA+GGG | 0.641385 | 7_3:-85080142 | None:intergenic |
| CCTGCATGTGCGGTAGTAAG+CGG | 0.646885 | 7_3:-85080186 | None:intergenic |
| TCCACACCATGAGATCATCA+AGG | 0.646997 | 7_3:-85084132 | None:intergenic |
| GAATATTAATACAAACCTTG+AGG | 0.649681 | 7_3:+85080030 | Msa1132220:five_prime_UTR |
| ATCAAGGTCAGAAAGTTGAA+GGG | 0.653293 | 7_3:-85084116 | None:intergenic |
| AAAGCTGGTTTCCAAAAGGA+GGG | 0.657724 | 7_3:+85084505 | Msa1132220:CDS |
| GAGATCAGTAGAAAGAACAC+TGG | 0.658551 | 7_3:-85084581 | None:intergenic |
| CGAAATGGCCAATGAAGTGG+TGG | 0.670105 | 7_3:-85080240 | None:intergenic |
| TTGGGAACTCTACACCAGCA+AGG | 0.679749 | 7_3:+85084186 | Msa1132220:CDS |
| CATTCTGTACGGCCATACAG+TGG | 0.680595 | 7_3:-85080209 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTTAAATTTTATTTTGAA+AGG | - | chr7_3:85081212-85081231 | None:intergenic | 10.0% |
| !!! | CAAAATAAAATTTAACTTTT+AGG | + | chr7_3:85081214-85081233 | Msa1132220:intron | 10.0% |
| !!! | ATTTGATTTGTTTAATTATT+TGG | + | chr7_3:85082088-85082107 | Msa1132220:intron | 10.0% |
| !! | TAATTTCAAATAAATAAGTA+TGG | - | chr7_3:85082159-85082178 | None:intergenic | 10.0% |
| !! | ATCTAATATTACATAATTGT+CGG | + | chr7_3:85080057-85080076 | Msa1132220:five_prime_UTR | 15.0% |
| !! | AGTAAAAACAAAAGTTAAAA+AGG | - | chr7_3:85080092-85080111 | None:intergenic | 15.0% |
| !!! | AGGAATCTTTTATTAAAATA+TGG | - | chr7_3:85080820-85080839 | None:intergenic | 15.0% |
| !!! | TGTTAGTTTTCTTTTTAAAT+GGG | + | chr7_3:85081064-85081083 | Msa1132220:intron | 15.0% |
| !! | TTGTTAAATAAAAAGTTCTA+TGG | - | chr7_3:85081181-85081200 | None:intergenic | 15.0% |
| !! | CAATAAAAGAATACAATAAT+TGG | - | chr7_3:85081249-85081268 | None:intergenic | 15.0% |
| !!! | TTAAAACAACTTTTCTTATT+GGG | - | chr7_3:85081420-85081439 | None:intergenic | 15.0% |
| !!! | ATTAAAACAACTTTTCTTAT+TGG | - | chr7_3:85081421-85081440 | None:intergenic | 15.0% |
| !! | GTAAATATAGTTTAACAAAA+AGG | - | chr7_3:85082959-85082978 | None:intergenic | 15.0% |
| !! | AAAATAAAATTTGAACCTTT+GGG | + | chr7_3:85083086-85083105 | Msa1132220:intron | 15.0% |
| !! | AAGTATAGAAAAAAAATTCA+TGG | + | chr7_3:85083257-85083276 | Msa1132220:intron | 15.0% |
| !! | AACAAAAGTTAAAAAGGAAT+AGG | - | chr7_3:85080086-85080105 | None:intergenic | 20.0% |
| !!! | CTATATTTTAGTTATTTCCA+AGG | + | chr7_3:85080446-85080465 | Msa1132220:intron | 20.0% |
| !!! | ATTTAAGATGAATATAATCC+AGG | - | chr7_3:85080516-85080535 | None:intergenic | 20.0% |
| !! | TTATAGTTATTGTATTCTGT+TGG | + | chr7_3:85080580-85080599 | Msa1132220:intron | 20.0% |
| !! | TATAGTTATTGTATTCTGTT+GGG | + | chr7_3:85080581-85080600 | Msa1132220:intron | 20.0% |
| !!! | ACTAATAAAGTTTTTACTGA+AGG | + | chr7_3:85080651-85080670 | Msa1132220:intron | 20.0% |
| !!! | CTAATAAAGTTTTTACTGAA+GGG | + | chr7_3:85080652-85080671 | Msa1132220:intron | 20.0% |
| !!! | TAATAAAGTTTTTACTGAAG+GGG | + | chr7_3:85080653-85080672 | Msa1132220:intron | 20.0% |
| !!! | AAAATCAAAATTGACTTGAA+TGG | + | chr7_3:85080676-85080695 | Msa1132220:intron | 20.0% |
| !!! | CTGTTAGTTTTCTTTTTAAA+TGG | + | chr7_3:85081063-85081082 | Msa1132220:intron | 20.0% |
| !!! | TTGAATATTTTATGTCAGAA+GGG | - | chr7_3:85081719-85081738 | None:intergenic | 20.0% |
| !!! | ATTGAATATTTTATGTCAGA+AGG | - | chr7_3:85081720-85081739 | None:intergenic | 20.0% |
| !! | TGACATAAAATATTCAATAG+AGG | + | chr7_3:85081722-85081741 | Msa1132220:intron | 20.0% |
| !!! | TTTATACTTTACAGCTATTT+TGG | - | chr7_3:85081764-85081783 | None:intergenic | 20.0% |
| !!! | AATATTTTAGTTTGATAGTG+TGG | + | chr7_3:85081782-85081801 | Msa1132220:intron | 20.0% |
| !! | GATATATTTCTCTAATCAAA+GGG | - | chr7_3:85082347-85082366 | None:intergenic | 20.0% |
| !! | TGATATATTTCTCTAATCAA+AGG | - | chr7_3:85082348-85082367 | None:intergenic | 20.0% |
| !! | CATAAAAATATTCCAAAAGT+AGG | - | chr7_3:85082590-85082609 | None:intergenic | 20.0% |
| !!! | CTACTTTTGGAATATTTTTA+TGG | + | chr7_3:85082588-85082607 | Msa1132220:intron | 20.0% |
| !!! | AAAATGCTTTCAATTTTACA+TGG | + | chr7_3:85082700-85082719 | Msa1132220:intron | 20.0% |
| !! | TTGTAAATAATTAACCAATC+TGG | + | chr7_3:85082753-85082772 | Msa1132220:intron | 20.0% |
| !! | GTTAAACTATATTTACACTT+TGG | + | chr7_3:85082963-85082982 | Msa1132220:intron | 20.0% |
| !!! | GTGAAAGAAATTATTTTGAA+AGG | - | chr7_3:85083045-85083064 | None:intergenic | 20.0% |
| !!! | GGTTCAAATTTTATTTTGAA+AGG | - | chr7_3:85083083-85083102 | None:intergenic | 20.0% |
| !! | CAAAATAAAATTTGAACCTT+TGG | + | chr7_3:85083085-85083104 | Msa1132220:intron | 20.0% |
| !!! | CTATATAAATTTGTCTTGTT+TGG | - | chr7_3:85083594-85083613 | None:intergenic | 20.0% |
| !! | ACAAGACAAATTTATATAGT+AGG | + | chr7_3:85083595-85083614 | Msa1132220:intron | 20.0% |
| !! | AAAAGAAAAAGTAGAGTTAA+AGG | - | chr7_3:85083900-85083919 | None:intergenic | 20.0% |
| !!! | TGTGTGTTTTTATTTTATCT+TGG | - | chr7_3:85083982-85084001 | None:intergenic | 20.0% |
| ! | GAATATTAATACAAACCTTG+AGG | + | chr7_3:85080030-85080049 | Msa1132220:five_prime_UTR | 25.0% |
| ! | TAATATTAGATTTCTCCTCA+AGG | - | chr7_3:85080048-85080067 | None:intergenic | 25.0% |
| ! | GATAATAATCACTTACTTGT+TGG | - | chr7_3:85080421-85080440 | None:intergenic | 25.0% |
| ! | ATAGTTATTGTATTCTGTTG+GGG | + | chr7_3:85080582-85080601 | Msa1132220:intron | 25.0% |
| ! | ATTAGAATTCTCCTATACTA+AGG | - | chr7_3:85080722-85080741 | None:intergenic | 25.0% |
| !! | CAATCTACACTGAAATTTTA+GGG | - | chr7_3:85080748-85080767 | None:intergenic | 25.0% |
| !! | AAAGATTCCTTTTTCTTTTG+TGG | + | chr7_3:85080830-85080849 | Msa1132220:intron | 25.0% |
| ! | AAACTATCCACAAAAGAAAA+AGG | - | chr7_3:85080840-85080859 | None:intergenic | 25.0% |
| !! | TTTTTAAATGGGTGTTTAGA+TGG | + | chr7_3:85081075-85081094 | Msa1132220:intron | 25.0% |
| ! | TAAGGGTCAATAACATAAAA+TGG | - | chr7_3:85081105-85081124 | None:intergenic | 25.0% |
| ! | AACATAATTCTCAATCATGA+AGG | + | chr7_3:85081493-85081512 | Msa1132220:intron | 25.0% |
| !! | TGAATATTTTATGTCAGAAG+GGG | - | chr7_3:85081718-85081737 | None:intergenic | 25.0% |
| ! | AAGCTATAATCTTATAGATG+CGG | - | chr7_3:85081811-85081830 | None:intergenic | 25.0% |
| !!! | CTATAAGATTATAGCTTTGT+AGG | + | chr7_3:85081814-85081833 | Msa1132220:intron | 25.0% |
| ! | AGTTCTGTTACTATTATATC+AGG | - | chr7_3:85081876-85081895 | None:intergenic | 25.0% |
| ! | TAATAGTAACAGAACTATCT+TGG | + | chr7_3:85081880-85081899 | Msa1132220:intron | 25.0% |
| ! | AATAGTAACAGAACTATCTT+GGG | + | chr7_3:85081881-85081900 | Msa1132220:intron | 25.0% |
| !!! | AACTTTAGAATTAAGAGATG+TGG | - | chr7_3:85081962-85081981 | None:intergenic | 25.0% |
| ! | AATGATACAAAATGTGTCAA+GGG | - | chr7_3:85082048-85082067 | None:intergenic | 25.0% |
| ! | ATAAATAAGTATGGAGAAGT+TGG | - | chr7_3:85082150-85082169 | None:intergenic | 25.0% |
| ! | TATAGGTATTTGATAGAATC+TGG | + | chr7_3:85082293-85082312 | Msa1132220:intron | 25.0% |
| ! | AAGTTGCGTTCTTAATTTAA+TGG | - | chr7_3:85082438-85082457 | None:intergenic | 25.0% |
| ! | TGACTAACTATTTCAATTGT+GGG | + | chr7_3:85082555-85082574 | Msa1132220:intron | 25.0% |
| !!! | ATGGTTTTATGTACCTTTTT+TGG | + | chr7_3:85082719-85082738 | Msa1132220:intron | 25.0% |
| !!! | AGATCAACAAGTTTTGTTAT+TGG | - | chr7_3:85083315-85083334 | None:intergenic | 25.0% |
| ! | GAAGATAAATCTTAGAATGA+AGG | + | chr7_3:85083394-85083413 | Msa1132220:intron | 25.0% |
| !!! | TGAACAGTAGGATTTTAATA+AGG | + | chr7_3:85083764-85083783 | Msa1132220:intron | 25.0% |
| ! | TAAATCAATTCTCTCTTCTT+TGG | - | chr7_3:85084077-85084096 | None:intergenic | 25.0% |
| ! | AGGAAATATTTGTTCATGAA+AGG | + | chr7_3:85084535-85084554 | Msa1132220:CDS | 25.0% |
| CATTCAAGGAAACAATAAGA+GGG | - | chr7_3:85080145-85080164 | None:intergenic | 30.0% | |
| ATACTATTCGTCATCTGATT+TGG | + | chr7_3:85080308-85080327 | Msa1132220:five_prime_UTR | 30.0% | |
| TTATTTACCTTCATAGCAGT+TGG | + | chr7_3:85080374-85080393 | Msa1132220:five_prime_UTR | 30.0% | |
| AAGATGAATATAATCCAGGT+GGG | - | chr7_3:85080512-85080531 | None:intergenic | 30.0% | |
| TAAGATGAATATAATCCAGG+TGG | - | chr7_3:85080513-85080532 | None:intergenic | 30.0% | |
| TAGTTATTGTATTCTGTTGG+GGG | + | chr7_3:85080583-85080602 | Msa1132220:intron | 30.0% | |
| ! | CTTTATGATAGCCTTAGTAT+AGG | + | chr7_3:85080708-85080727 | Msa1132220:intron | 30.0% |
| ! | CCAATCTACACTGAAATTTT+AGG | - | chr7_3:85080749-85080768 | None:intergenic | 30.0% |
| CCTAAAATTTCAGTGTAGAT+TGG | + | chr7_3:85080746-85080765 | Msa1132220:intron | 30.0% | |
| TAAGGTGACAGGAAAAAAAT+AGG | - | chr7_3:85080882-85080901 | None:intergenic | 30.0% | |
| ! | TTTCCTGTCACCTTAAATTT+TGG | + | chr7_3:85080887-85080906 | Msa1132220:intron | 30.0% |
| TGGTAAACCTCCAAAATTTA+AGG | - | chr7_3:85080900-85080919 | None:intergenic | 30.0% | |
| !! | TAAATTTTGGAGGTTTACCA+AGG | + | chr7_3:85080900-85080919 | Msa1132220:intron | 30.0% |
| CATTATTGTTGCATTAACTC+AGG | - | chr7_3:85080947-85080966 | None:intergenic | 30.0% | |
| ACAGACTCAACATAAGTTAA+GGG | - | chr7_3:85081122-85081141 | None:intergenic | 30.0% | |
| AGAAGTGGTAAAAAATTGCA+TGG | + | chr7_3:85081340-85081359 | Msa1132220:intron | 30.0% | |
| TACATATCTCTATAGAGAAG+AGG | + | chr7_3:85081388-85081407 | Msa1132220:intron | 30.0% | |
| TATAGATTCAAGTATCTTGC+TGG | + | chr7_3:85081584-85081603 | Msa1132220:intron | 30.0% | |
| ! | TTAGTTCTCAAAGCAATTGA+AGG | - | chr7_3:85081912-85081931 | None:intergenic | 30.0% |
| GAATGATACAAAATGTGTCA+AGG | - | chr7_3:85082049-85082068 | None:intergenic | 30.0% | |
| ! | TCCAATATTCAGGTTTAAAG+AGG | + | chr7_3:85082197-85082216 | Msa1132220:intron | 30.0% |
| TCCTCTTTAAACCTGAATAT+TGG | - | chr7_3:85082201-85082220 | None:intergenic | 30.0% | |
| TGGTATACTATTGCTGAAAA+TGG | + | chr7_3:85082313-85082332 | Msa1132220:intron | 30.0% | |
| GGTATACTATTGCTGAAAAT+GGG | + | chr7_3:85082314-85082333 | Msa1132220:intron | 30.0% | |
| !!! | AGTTGCATTTTTCAAGCAAT+AGG | + | chr7_3:85082465-85082484 | Msa1132220:intron | 30.0% |
| CTGACTAACTATTTCAATTG+TGG | + | chr7_3:85082554-85082573 | Msa1132220:intron | 30.0% | |
| GACTAACTATTTCAATTGTG+GGG | + | chr7_3:85082556-85082575 | Msa1132220:intron | 30.0% | |
| AACACACAATAGTCCAAAAA+AGG | - | chr7_3:85082735-85082754 | None:intergenic | 30.0% | |
| ACTTGAATATAACATGTTGC+TGG | + | chr7_3:85082872-85082891 | Msa1132220:intron | 30.0% | |
| !!! | TTTTTTTGTGCCTTTGTTAC+TGG | + | chr7_3:85083128-85083147 | Msa1132220:intron | 30.0% |
| TGTTGATCTATATCCTTCAA+TGG | + | chr7_3:85083326-85083345 | Msa1132220:intron | 30.0% | |
| ! | ATCATCACAAATTTAGAGCA+TGG | + | chr7_3:85083360-85083379 | Msa1132220:intron | 30.0% |
| AAATTAACATCCACTTGCAA+TGG | - | chr7_3:85083698-85083717 | None:intergenic | 30.0% | |
| TTTATTTGCGTTTGAACAGT+AGG | + | chr7_3:85083752-85083771 | Msa1132220:intron | 30.0% | |
| ATTGATATTCAAGTCAACCA+TGG | + | chr7_3:85083801-85083820 | Msa1132220:intron | 30.0% | |
| !!! | GCCTTAAAGTGTTGAATTTT+GGG | - | chr7_3:85083948-85083967 | None:intergenic | 30.0% |
| !!! | TGCCTTAAAGTGTTGAATTT+TGG | - | chr7_3:85083949-85083968 | None:intergenic | 30.0% |
| !! | CACTTGTTTCTTTCTGTTTT+TGG | - | chr7_3:85084015-85084034 | None:intergenic | 30.0% |
| ATATAGCTACCAAGTTTCTA+TGG | + | chr7_3:85084233-85084252 | Msa1132220:CDS | 30.0% | |
| !! | ATGTTCTAGGCTCTAAATAT+TGG | + | chr7_3:85084356-85084375 | Msa1132220:CDS | 30.0% |
| !! | TGTTCTAGGCTCTAAATATT+GGG | + | chr7_3:85084357-85084376 | Msa1132220:CDS | 30.0% |
| TGTTGTGAAACAAGTTGTTA+AGG | + | chr7_3:85084399-85084418 | Msa1132220:CDS | 30.0% | |
| ! | ATTTTGTGAGTTGTCTTACT+TGG | + | chr7_3:85084426-85084445 | Msa1132220:CDS | 30.0% |
| GCATTCAAGGAAACAATAAG+AGG | - | chr7_3:85080146-85080165 | None:intergenic | 35.0% | |
| TTCGTCATAATTGTCCGAAA+TGG | - | chr7_3:85080258-85080277 | None:intergenic | 35.0% | |
| ATTTCGGACAATTATGACGA+AGG | + | chr7_3:85080257-85080276 | Msa1132220:five_prime_UTR | 35.0% | |
| !! | ACTTGTTGGTGTTGTTATCA+AGG | - | chr7_3:85080407-85080426 | None:intergenic | 35.0% |
| !! | TTTTAGTTATTTCCAAGGCC+AGG | + | chr7_3:85080451-85080470 | Msa1132220:intron | 35.0% |
| ! | GAAGGTGTGATAATGTTATC+AGG | - | chr7_3:85080477-85080496 | None:intergenic | 35.0% |
| GGTTGTTCATCTTGAATCTT+TGG | + | chr7_3:85080604-85080623 | Msa1132220:intron | 35.0% | |
| TGGACTGAGGCAAAAAAAAT+TGG | + | chr7_3:85080766-85080785 | Msa1132220:intron | 35.0% | |
| GGACTGAGGCAAAAAAAATT+GGG | + | chr7_3:85080767-85080786 | Msa1132220:intron | 35.0% | |
| ATTAACTCAGGCAAAAAGGA+CGG | - | chr7_3:85080935-85080954 | None:intergenic | 35.0% | |
| TTGCATTAACTCAGGCAAAA+AGG | - | chr7_3:85080939-85080958 | None:intergenic | 35.0% | |
| !!! | ATGTACCTTTTTTCGACTCT+TGG | + | chr7_3:85080988-85081007 | Msa1132220:intron | 35.0% |
| CACAGACTCAACATAAGTTA+AGG | - | chr7_3:85081123-85081142 | None:intergenic | 35.0% | |
| !! | TCTTTTATTGTGCTTGTTGC+CGG | + | chr7_3:85081259-85081278 | Msa1132220:intron | 35.0% |
| TAATGGGGAAAGAAAGTGAA+TGG | + | chr7_3:85081659-85081678 | Msa1132220:intron | 35.0% | |
| !! | TATCACAAAAGCATTGCAAG+TGG | + | chr7_3:85081837-85081856 | Msa1132220:intron | 35.0% |
| AATTAAGAGATGTGGAGTGA+AGG | - | chr7_3:85081954-85081973 | None:intergenic | 35.0% | |
| AATATAAGTACTATCCCTGC+TGG | + | chr7_3:85082010-85082029 | Msa1132220:intron | 35.0% | |
| ATACAAAATGTGTCAAGGGA+TGG | - | chr7_3:85082044-85082063 | None:intergenic | 35.0% | |
| GTATCATTCCTTCCAAAAAG+TGG | + | chr7_3:85082060-85082079 | Msa1132220:intron | 35.0% | |
| !!! | ATCAAATAAGCGCCACTTTT+TGG | - | chr7_3:85082075-85082094 | None:intergenic | 35.0% |
| ! | TGATGTTGCTTCCAATATTC+AGG | + | chr7_3:85082187-85082206 | Msa1132220:intron | 35.0% |
| CTTGAAAAATGCAACTAGCA+AGG | - | chr7_3:85082461-85082480 | None:intergenic | 35.0% | |
| !!! | ATAGGCTTTTTTGCTTTCTC+AGG | + | chr7_3:85082483-85082502 | Msa1132220:intron | 35.0% |
| AATATAACATGTTGCTGGTG+TGG | + | chr7_3:85082877-85082896 | Msa1132220:intron | 35.0% | |
| TACACAACAATTAGTCCCAA+AGG | - | chr7_3:85083104-85083123 | None:intergenic | 35.0% | |
| ! | TAAATTTGTGATGATGCAGG+TGG | - | chr7_3:85083355-85083374 | None:intergenic | 35.0% |
| ! | CTCTAAATTTGTGATGATGC+AGG | - | chr7_3:85083358-85083377 | None:intergenic | 35.0% |
| ! | CATTGCAAAGAGAGTATGAA+GGG | + | chr7_3:85083464-85083483 | Msa1132220:intron | 35.0% |
| ! | ATTGCAAAGAGAGTATGAAG+GGG | + | chr7_3:85083465-85083484 | Msa1132220:intron | 35.0% |
| ! | TAACCTATATAGTAGCTCTG+TGG | + | chr7_3:85083622-85083641 | Msa1132220:intron | 35.0% |
| ! | AACCTATATAGTAGCTCTGT+GGG | + | chr7_3:85083623-85083642 | Msa1132220:intron | 35.0% |
| ! | TAGCTCTGTGGGTATTATAT+GGG | + | chr7_3:85083634-85083653 | Msa1132220:intron | 35.0% |
| AAATGACAAACCATTGCAAG+TGG | + | chr7_3:85083685-85083704 | Msa1132220:intron | 35.0% | |
| !! | GTAGGATTTTAATAAGGCTG+TGG | + | chr7_3:85083770-85083789 | Msa1132220:intron | 35.0% |
| AAGCAAGAAAAGGGAAGTAA+GGG | - | chr7_3:85083855-85083874 | None:intergenic | 35.0% | |
| GAAGGAATCAAGCAAGAAAA+GGG | - | chr7_3:85083864-85083883 | None:intergenic | 35.0% | |
| AGAAGGAATCAAGCAAGAAA+AGG | - | chr7_3:85083865-85083884 | None:intergenic | 35.0% | |
| TAGAGTTAAAGGAAGTTGCA+TGG | - | chr7_3:85083889-85083908 | None:intergenic | 35.0% | |
| TTGGGCTATTTATTGAGTCT+TGG | - | chr7_3:85083930-85083949 | None:intergenic | 35.0% | |
| GCCCAAAATTCAACACTTTA+AGG | + | chr7_3:85083944-85083963 | Msa1132220:intron | 35.0% | |
| ! | GAAAGAAACAAGTGTTGTGA+TGG | + | chr7_3:85084021-85084040 | Msa1132220:CDS | 35.0% |
| ATCAAGGTCAGAAAGTTGAA+GGG | - | chr7_3:85084119-85084138 | None:intergenic | 35.0% | |
| !! | GTTCTAGGCTCTAAATATTG+GGG | + | chr7_3:85084358-85084377 | Msa1132220:CDS | 35.0% |
| ! | GCTCTAAATATTGGGGTAAA+GGG | + | chr7_3:85084365-85084384 | Msa1132220:CDS | 35.0% |
| CTCTAAATATTGGGGTAAAG+GGG | + | chr7_3:85084366-85084385 | Msa1132220:CDS | 35.0% | |
| ! | AACTTGTTTCACAACACATG+TGG | - | chr7_3:85084395-85084414 | None:intergenic | 35.0% |
| ! | TTAGTTGATGTGGAAAATGC+TGG | + | chr7_3:85084463-85084482 | Msa1132220:CDS | 35.0% |
| ! | TAGTTGATGTGGAAAATGCT+GGG | + | chr7_3:85084464-85084483 | Msa1132220:CDS | 35.0% |
| CAAGGAAACAATAAGAGGGT+CGG | - | chr7_3:85080141-85080160 | None:intergenic | 40.0% | |
| ! | TGTGATAATGTTATCAGGCC+TGG | - | chr7_3:85080472-85080491 | None:intergenic | 40.0% |
| GGTGGGATGAAAAGATATGA+AGG | - | chr7_3:85080495-85080514 | None:intergenic | 40.0% | |
| ! | TCATATCTTTTCATCCCACC+TGG | + | chr7_3:85080495-85080514 | Msa1132220:intron | 40.0% |
| TTTCAGTGTAGATTGGACTG+AGG | + | chr7_3:85080753-85080772 | Msa1132220:intron | 40.0% | |
| ! | CCTCCAAAATTTAAGGTGAC+AGG | - | chr7_3:85080893-85080912 | None:intergenic | 40.0% |
| ! | CCTGTCACCTTAAATTTTGG+AGG | + | chr7_3:85080890-85080909 | Msa1132220:intron | 40.0% |
| CAACACCAAGAGTCGAAAAA+AGG | - | chr7_3:85080996-85081015 | None:intergenic | 40.0% | |
| GCTTGCATGCTATTCAAGAA+TGG | - | chr7_3:85081030-85081049 | None:intergenic | 40.0% | |
| GACTCATAAAGGAATCACAC+CGG | - | chr7_3:85081281-85081300 | None:intergenic | 40.0% | |
| AGTTTCGACAACCAACTCAT+GGG | - | chr7_3:85081304-85081323 | None:intergenic | 40.0% | |
| AAGTTTCGACAACCAACTCA+TGG | - | chr7_3:85081305-85081324 | None:intergenic | 40.0% | |
| ! | GGTTGTCGAAACTTGATGAT+TGG | + | chr7_3:85081311-85081330 | Msa1132220:intron | 40.0% |
| GATGATTGGAGACAAAGAAG+TGG | + | chr7_3:85081325-85081344 | Msa1132220:intron | 40.0% | |
| TACTACATGCTCTATGATGC+AGG | - | chr7_3:85081462-85081481 | None:intergenic | 40.0% | |
| TGGCAAGAGTTCAAGCATAA+TGG | + | chr7_3:85081642-85081661 | Msa1132220:intron | 40.0% | |
| GGCAAGAGTTCAAGCATAAT+GGG | + | chr7_3:85081643-85081662 | Msa1132220:intron | 40.0% | |
| GCAAGAGTTCAAGCATAATG+GGG | + | chr7_3:85081644-85081663 | Msa1132220:intron | 40.0% | |
| AAAGTGAATGGCAAGTGAAG+AGG | + | chr7_3:85081671-85081690 | Msa1132220:intron | 40.0% | |
| GGATGGAAATAAAACCAGCA+GGG | - | chr7_3:85082027-85082046 | None:intergenic | 40.0% | |
| !!! | AATAAGCGCCACTTTTTGGA+AGG | - | chr7_3:85082071-85082090 | None:intergenic | 40.0% |
| TGGAGAAGTTGGAAACAAAG+TGG | - | chr7_3:85082139-85082158 | None:intergenic | 40.0% | |
| AGGTTTAAAGAGGAGATGAC+AGG | + | chr7_3:85082207-85082226 | Msa1132220:intron | 40.0% | |
| AAAGAGGAGATGACAGGAAA+TGG | + | chr7_3:85082213-85082232 | Msa1132220:exon | 40.0% | |
| AATTCTGGTGGTCATAACAC+TGG | - | chr7_3:85082625-85082644 | None:intergenic | 40.0% | |
| ATGACCACCAGAATTGATTG+AGG | + | chr7_3:85082630-85082649 | Msa1132220:intron | 40.0% | |
| GTTCTCACCTCAATCAATTC+TGG | - | chr7_3:85082640-85082659 | None:intergenic | 40.0% | |
| GTGAGAACAATTGATCATGC+TGG | + | chr7_3:85082652-85082671 | Msa1132220:intron | 40.0% | |
| GCTTGCATTCTATTCCAGAT+TGG | - | chr7_3:85082770-85082789 | None:intergenic | 40.0% | |
| GGTTTACACAGCTAACTCAT+GGG | - | chr7_3:85083172-85083191 | None:intergenic | 40.0% | |
| AGGTTTACACAGCTAACTCA+TGG | - | chr7_3:85083173-85083192 | None:intergenic | 40.0% | |
| GAGTTAGCTGTGTAAACCTA+TGG | + | chr7_3:85083174-85083193 | Msa1132220:intron | 40.0% | |
| AGCTGTGTAAACCTATGGAT+TGG | + | chr7_3:85083179-85083198 | Msa1132220:intron | 40.0% | |
| CTTCTTAGTCTCCAATCCAT+AGG | - | chr7_3:85083193-85083212 | None:intergenic | 40.0% | |
| !! | ATGGATTGGAGACTAAGAAG+AGG | + | chr7_3:85083193-85083212 | Msa1132220:intron | 40.0% |
| ! | GCATTGCAAAGAGAGTATGA+AGG | + | chr7_3:85083463-85083482 | Msa1132220:intron | 40.0% |
| !! | TCATACTCTCTCTTTGGGAT+AGG | - | chr7_3:85083507-85083526 | None:intergenic | 40.0% |
| ! | ATCCCAAAGAGAGAGTATGA+AGG | + | chr7_3:85083507-85083526 | Msa1132220:intron | 40.0% |
| GACCTTCATACTCTCTCTTT+GGG | - | chr7_3:85083512-85083531 | None:intergenic | 40.0% | |
| AGACCTTCATACTCTCTCTT+TGG | - | chr7_3:85083513-85083532 | None:intergenic | 40.0% | |
| GATGGAATGCACTTCAACAA+AGG | + | chr7_3:85083546-85083565 | Msa1132220:intron | 40.0% | |
| TACCCACAGAGCTACTATAT+AGG | - | chr7_3:85083628-85083647 | None:intergenic | 40.0% | |
| ! | GTAGCTCTGTGGGTATTATA+TGG | + | chr7_3:85083633-85083652 | Msa1132220:intron | 40.0% |
| AGCTCTGTGGGTATTATATG+GGG | + | chr7_3:85083635-85083654 | Msa1132220:intron | 40.0% | |
| GGGAAGGATTATTTAGCAAG+TGG | + | chr7_3:85083655-85083674 | Msa1132220:intron | 40.0% | |
| ATATTCAAGTCAACCATGGC+AGG | + | chr7_3:85083805-85083824 | Msa1132220:intron | 40.0% | |
| AAAGGGAAGTAAGGGTTTCA+AGG | - | chr7_3:85083847-85083866 | None:intergenic | 40.0% | |
| CAAGCAAGAAAAGGGAAGTA+AGG | - | chr7_3:85083856-85083875 | None:intergenic | 40.0% | |
| AAAGGAAGTTGCATGGAAGA+AGG | - | chr7_3:85083882-85083901 | None:intergenic | 40.0% | |
| CATCAAGGTCAGAAAGTTGA+AGG | - | chr7_3:85084120-85084139 | None:intergenic | 40.0% | |
| ! | TTCTGACCTTGATGATCTCA+TGG | + | chr7_3:85084126-85084145 | Msa1132220:CDS | 40.0% |
| GTGGACAACTGATGAAAAAG+TGG | + | chr7_3:85084150-85084169 | Msa1132220:CDS | 40.0% | |
| TGCTTTGCACCATAGAAACT+TGG | - | chr7_3:85084245-85084264 | None:intergenic | 40.0% | |
| TGCATCAATGATCGTGCAAT+TGG | + | chr7_3:85084268-85084287 | Msa1132220:CDS | 40.0% | |
| GCATCAATGATCGTGCAATT+GGG | + | chr7_3:85084269-85084288 | Msa1132220:CDS | 40.0% | |
| TTTATCACCAGGTGAACTTG+AGG | - | chr7_3:85084308-85084327 | None:intergenic | 40.0% | |
| TTGTTCCTGGATTTATCACC+AGG | - | chr7_3:85084319-85084338 | None:intergenic | 40.0% | |
| AAGTTCTGCACATTTGTTCC+TGG | - | chr7_3:85084332-85084351 | None:intergenic | 40.0% | |
| AGGAACAAATGTGCAGAACT+TGG | + | chr7_3:85084331-85084350 | Msa1132220:CDS | 40.0% | |
| !! | GGCTCTAAATATTGGGGTAA+AGG | + | chr7_3:85084364-85084383 | Msa1132220:CDS | 40.0% |
| GTGAGTTGTCTTACTTGGAA+AGG | + | chr7_3:85084431-85084450 | Msa1132220:CDS | 40.0% | |
| ! | GCTTGAAGCTTTAGTTGATG+TGG | + | chr7_3:85084453-85084472 | Msa1132220:CDS | 40.0% |
| ! | AAAGCTGGTTTCCAAAAGGA+GGG | + | chr7_3:85084505-85084524 | Msa1132220:CDS | 40.0% |
| GAGATCAGTAGAAAGAACAC+TGG | - | chr7_3:85084584-85084603 | None:intergenic | 40.0% | |
| !! | CTGGGTACTAGAAGCATTCA+AGG | - | chr7_3:85080159-85080178 | None:intergenic | 45.0% |
| TGGCGGTTTGACATTCTGTA+CGG | - | chr7_3:85080223-85080242 | None:intergenic | 45.0% | |
| CACCACTTCATTGGCCATTT+CGG | + | chr7_3:85080241-85080260 | Msa1132220:five_prime_UTR | 45.0% | |
| TCGCAAACCAACTGCTATGA+AGG | - | chr7_3:85080384-85080403 | None:intergenic | 45.0% | |
| AAGGACGGCGTATATTACCT+TGG | - | chr7_3:85080920-85080939 | None:intergenic | 45.0% | |
| CAACTCATGGGGACTCATAA+AGG | - | chr7_3:85081292-85081311 | None:intergenic | 45.0% | |
| CTTTATGAGTCCCCATGAGT+TGG | + | chr7_3:85081290-85081309 | Msa1132220:intron | 45.0% | |
| GTTTCGACAACCAACTCATG+GGG | - | chr7_3:85081303-85081322 | None:intergenic | 45.0% | |
| TACATGCTCTATGATGCAGG+TGG | - | chr7_3:85081459-85081478 | None:intergenic | 45.0% | |
| GATGACAAGAGTTTGAGCAG+AGG | + | chr7_3:85081612-85081631 | Msa1132220:intron | 45.0% | |
| ACAAGAGTTTGAGCAGAGGA+TGG | + | chr7_3:85081616-85081635 | Msa1132220:intron | 45.0% | |
| GGGATGGAAATAAAACCAGC+AGG | - | chr7_3:85082028-85082047 | None:intergenic | 45.0% | |
| ACTGACTGGAGTCCAGAATT+TGG | + | chr7_3:85082240-85082259 | Msa1132220:CDS | 45.0% | |
| CCTTGGACAACACCAAATTC+TGG | - | chr7_3:85082255-85082274 | None:intergenic | 45.0% | |
| !! | CCAGAATTTGGTGTTGTCCA+AGG | + | chr7_3:85082252-85082271 | Msa1132220:CDS | 45.0% |
| GCTGGTAGGCTTGATACTAT+AGG | + | chr7_3:85082276-85082295 | Msa1132220:CDS | 45.0% | |
| ! | GTCATAACACTGGTTGGGAA+GGG | - | chr7_3:85082615-85082634 | None:intergenic | 45.0% |
| ! | TGGTGGTCATAACACTGGTT+GGG | - | chr7_3:85082620-85082639 | None:intergenic | 45.0% |
| CTCACCTCAATCAATTCTGG+TGG | - | chr7_3:85082637-85082656 | None:intergenic | 45.0% | |
| TTGTGCCTTTGTTACTGGTG+TGG | + | chr7_3:85083133-85083152 | Msa1132220:intron | 45.0% | |
| AGCTACCACACCAGTAACAA+AGG | - | chr7_3:85083141-85083160 | None:intergenic | 45.0% | |
| ! | AAGAGAGTATGAAGGGGTCA+AGG | + | chr7_3:85083471-85083490 | Msa1132220:intron | 45.0% |
| ! | AGAGAGTATGAAGGGGTCAA+GGG | + | chr7_3:85083472-85083491 | Msa1132220:intron | 45.0% |
| ! | AGAGAGAGTATGAAGGTCTC+AGG | + | chr7_3:85083514-85083533 | Msa1132220:intron | 45.0% |
| CTGTGGGTATTATATGGGGA+AGG | + | chr7_3:85083639-85083658 | Msa1132220:intron | 45.0% | |
| ATTCTCTCTTCTTTGGCACG+TGG | - | chr7_3:85084070-85084089 | None:intergenic | 45.0% | |
| AAGGGCTCGAAGTGTGATTT+GGG | - | chr7_3:85084101-85084120 | None:intergenic | 45.0% | |
| ! | ACCTTGATGATCTCATGGTG+TGG | + | chr7_3:85084131-85084150 | Msa1132220:CDS | 45.0% |
| TCCACACCATGAGATCATCA+AGG | - | chr7_3:85084135-85084154 | None:intergenic | 45.0% | |
| AAGTGGCCAAATTCTGCTCT+TGG | + | chr7_3:85084167-85084186 | Msa1132220:CDS | 45.0% | |
| AGTGGCCAAATTCTGCTCTT+GGG | + | chr7_3:85084168-85084187 | Msa1132220:CDS | 45.0% | |
| GAGTTCCCAAGAGCAGAATT+TGG | - | chr7_3:85084176-85084195 | None:intergenic | 45.0% | |
| TCTCTATCCTCAAGTTCACC+TGG | + | chr7_3:85084298-85084317 | Msa1132220:CDS | 45.0% | |
| GTTCACCTGGTGATAAATCC+AGG | + | chr7_3:85084311-85084330 | Msa1132220:CDS | 45.0% | |
| GCAGAACTTGGCTATGTTCT+AGG | + | chr7_3:85084343-85084362 | Msa1132220:CDS | 45.0% | |
| ! | GGAGAAAGCTGGTTTCCAAA+AGG | + | chr7_3:85084501-85084520 | Msa1132220:CDS | 45.0% |
| ! | GAAAGCTGGTTTCCAAAAGG+AGG | + | chr7_3:85084504-85084523 | Msa1132220:CDS | 45.0% |
| TCCAAAAGGAGGGAGTTCTA+AGG | + | chr7_3:85084515-85084534 | Msa1132220:CDS | 45.0% | |
| ! | TCCTTAGAACTCCCTCCTTT+TGG | - | chr7_3:85084519-85084538 | None:intergenic | 45.0% |
| GTAGTAAGCGGTGGTCATCT+GGG | - | chr7_3:85080177-85080196 | None:intergenic | 50.0% | |
| CATTCTGTACGGCCATACAG+TGG | - | chr7_3:85080212-85080231 | None:intergenic | 50.0% | |
| TCAAACCGCCACCACTTCAT+TGG | + | chr7_3:85080232-85080251 | Msa1132220:five_prime_UTR | 50.0% | |
| AATGGCCAATGAAGTGGTGG+CGG | - | chr7_3:85080240-85080259 | None:intergenic | 50.0% | |
| CGAAATGGCCAATGAAGTGG+TGG | - | chr7_3:85080243-85080262 | None:intergenic | 50.0% | |
| GTCCGAAATGGCCAATGAAG+TGG | - | chr7_3:85080246-85080265 | None:intergenic | 50.0% | |
| AATGTTATCAGGCCTGGCCT+TGG | - | chr7_3:85080466-85080485 | None:intergenic | 50.0% | |
| GCAGGTGGTAGGTACATTAG+AGG | - | chr7_3:85081444-85081463 | None:intergenic | 50.0% | |
| TGCTCTATGATGCAGGTGGT+AGG | - | chr7_3:85081455-85081474 | None:intergenic | 50.0% | |
| GTTTGAGCAGAGGATGGAGA+TGG | + | chr7_3:85081622-85081641 | Msa1132220:intron | 50.0% | |
| CAGGAAATGGAACGACTGAC+TGG | + | chr7_3:85082226-85082245 | Msa1132220:CDS | 50.0% | |
| !! | TTTGGTGTTGTCCAAGGTGC+TGG | + | chr7_3:85082258-85082277 | Msa1132220:CDS | 50.0% |
| TATCAAGCCTACCAGCACCT+TGG | - | chr7_3:85082272-85082291 | None:intergenic | 50.0% | |
| ! | GGGGATCAGTTGCCTACTTT+TGG | + | chr7_3:85082575-85082594 | Msa1132220:intron | 50.0% |
| ! | GGTCATAACACTGGTTGGGA+AGG | - | chr7_3:85082616-85082635 | None:intergenic | 50.0% |
| CTGGTGGTCATAACACTGGT+TGG | - | chr7_3:85082621-85082640 | None:intergenic | 50.0% | |
| ATGCAGGTGGTCTCCATTGA+AGG | - | chr7_3:85083342-85083361 | None:intergenic | 50.0% | |
| ! | ATGAAGGTCTCAGGAGCACA+AGG | + | chr7_3:85083523-85083542 | Msa1132220:intron | 50.0% |
| ! | TGAAGGTCTCAGGAGCACAA+GGG | + | chr7_3:85083524-85083543 | Msa1132220:intron | 50.0% |
| CTTCAATTCTCTGCCTGCCA+TGG | - | chr7_3:85083821-85083840 | None:intergenic | 50.0% | |
| GAAGGGCTCGAAGTGTGATT+TGG | - | chr7_3:85084102-85084121 | None:intergenic | 50.0% | |
| TTGGGAACTCTACACCAGCA+AGG | + | chr7_3:85084186-85084205 | Msa1132220:CDS | 50.0% | |
| CTCTACACCAGCAAGGATGA+TGG | + | chr7_3:85084193-85084212 | Msa1132220:CDS | 50.0% | |
| GTTGATGCCATCATCCTTGC+TGG | - | chr7_3:85084203-85084222 | None:intergenic | 50.0% | |
| !! | CAAAGAGTGCTGGAGAAAGC+TGG | + | chr7_3:85084490-85084509 | Msa1132220:CDS | 50.0% |
| GGTAGTAAGCGGTGGTCATC+TGG | - | chr7_3:85080178-85080197 | None:intergenic | 55.0% | |
| CCTGCATGTGCGGTAGTAAG+CGG | - | chr7_3:85080189-85080208 | None:intergenic | 55.0% | |
| CATACAGTGGCCTGCATGTG+CGG | - | chr7_3:85080199-85080218 | None:intergenic | 55.0% | |
| !! | GTGTTGTCCAAGGTGCTGGT+AGG | + | chr7_3:85082262-85082281 | Msa1132220:CDS | 55.0% |
| GTTGCTGGTGTGGTTGCTTC+AGG | + | chr7_3:85082887-85082906 | Msa1132220:intron | 55.0% | |
| ! | TGCTGGGTCTCAAAGAGTGC+TGG | + | chr7_3:85084480-85084499 | Msa1132220:CDS | 55.0% |
| GCATGTGCGGTAGTAAGCGG+TGG | - | chr7_3:85080186-85080205 | None:intergenic | 60.0% | |
| CCGCTTACTACCGCACATGC+AGG | + | chr7_3:85080186-85080205 | Msa1132220:five_prime_UTR | 60.0% | |
| CGCACATGCAGGCCACTGTA+TGG | + | chr7_3:85080197-85080216 | Msa1132220:five_prime_UTR | 60.0% | |
| ! | GGTCTCAGGAGCACAAGGGA+TGG | + | chr7_3:85083528-85083547 | Msa1132220:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 85079999 | 85084612 | 85079999 | ID=Msa1132220;Name=Msa1132220 |
| chr7_3 | mRNA | 85079999 | 85084612 | 85079999 | ID=Msa1132220-mRNA-1;Parent=Msa1132220;Name=Msa1132220-mRNA-1;_AED=0.38;_eAED=0.38;_QI=439|0.5|0.66|1|0|0.33|3|0|234 |
| chr7_3 | exon | 85079999 | 85080424 | 85079999 | ID=Msa1132220-mRNA-1:exon:25319;Parent=Msa1132220-mRNA-1 |
| chr7_3 | exon | 85082209 | 85082297 | 85082209 | ID=Msa1132220-mRNA-1:exon:25320;Parent=Msa1132220-mRNA-1 |
| chr7_3 | exon | 85083984 | 85084612 | 85083984 | ID=Msa1132220-mRNA-1:exon:25321;Parent=Msa1132220-mRNA-1 |
| chr7_3 | five_prime_UTR | 85079999 | 85080424 | 85079999 | ID=Msa1132220-mRNA-1:five_prime_utr;Parent=Msa1132220-mRNA-1 |
| chr7_3 | five_prime_UTR | 85082209 | 85082221 | 85082209 | ID=Msa1132220-mRNA-1:five_prime_utr;Parent=Msa1132220-mRNA-1 |
| chr7_3 | CDS | 85082222 | 85082297 | 85082222 | ID=Msa1132220-mRNA-1:cds;Parent=Msa1132220-mRNA-1 |
| chr7_3 | CDS | 85083984 | 85084612 | 85083984 | ID=Msa1132220-mRNA-1:cds;Parent=Msa1132220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
