Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1134000 | QSD99826.1 | 87.500 | 248 | 20 | 3 | 1 | 238 | 1 | 247 | 2.22e-148 | 424 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1134000 | sp|Q9FY93|NAC83_ARATH | 57.028 | 249 | 90 | 6 | 1 | 235 | 1 | 246 | 3.05e-92 | 275 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1134000 | A0A896WEL3 | 87.500 | 248 | 20 | 3 | 1 | 238 | 1 | 247 | 1.06e-148 | 424 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1134000 | TF | NAC |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1134000 | MtrunA17_Chr7g0214071 | 90.661 | 257 | 11 | 6 | 1 | 246 | 1 | 255 | 3.65e-152 | 424 |
| Msa1134000 | MtrunA17_Chr8g0385991 | 59.669 | 181 | 61 | 4 | 1 | 171 | 1 | 179 | 7.52e-73 | 221 |
| Msa1134000 | MtrunA17_Chr3g0131911 | 53.488 | 215 | 75 | 5 | 1 | 203 | 1 | 202 | 2.64e-69 | 213 |
| Msa1134000 | MtrunA17_Chr4g0047841 | 56.000 | 175 | 48 | 3 | 14 | 159 | 14 | 188 | 5.49e-60 | 192 |
| Msa1134000 | MtrunA17_Chr2g0318101 | 54.545 | 176 | 63 | 3 | 1 | 159 | 1 | 176 | 4.51e-59 | 191 |
| Msa1134000 | MtrunA17_Chr7g0252971 | 52.542 | 177 | 65 | 5 | 12 | 170 | 5 | 180 | 7.69e-59 | 189 |
| Msa1134000 | MtrunA17_Chr5g0417791 | 58.228 | 158 | 54 | 3 | 13 | 160 | 1 | 156 | 1.04e-58 | 187 |
| Msa1134000 | MtrunA17_Chr4g0042561 | 59.119 | 159 | 53 | 4 | 15 | 163 | 9 | 165 | 1.36e-58 | 187 |
| Msa1134000 | MtrunA17_Chr7g0263931 | 50.802 | 187 | 80 | 4 | 12 | 186 | 8 | 194 | 6.37e-57 | 184 |
| Msa1134000 | MtrunA17_Chr3g0124761 | 55.621 | 169 | 63 | 3 | 12 | 171 | 4 | 169 | 1.43e-55 | 179 |
| Msa1134000 | MtrunA17_Chr3g0109821 | 58.480 | 171 | 55 | 7 | 13 | 171 | 4 | 170 | 7.81e-55 | 186 |
| Msa1134000 | MtrunA17_Chr3g0139331 | 52.532 | 158 | 71 | 2 | 12 | 165 | 8 | 165 | 4.11e-54 | 177 |
| Msa1134000 | MtrunA17_Chr2g0309891 | 52.632 | 171 | 68 | 4 | 13 | 172 | 4 | 172 | 4.62e-54 | 177 |
| Msa1134000 | MtrunA17_Chr1g0147421 | 51.397 | 179 | 76 | 4 | 12 | 185 | 24 | 196 | 5.92e-54 | 177 |
| Msa1134000 | MtrunA17_Chr2g0326361 | 54.605 | 152 | 59 | 2 | 15 | 156 | 14 | 165 | 6.02e-54 | 176 |
| Msa1134000 | MtrunA17_Chr4g0018391 | 55.556 | 153 | 59 | 4 | 15 | 160 | 7 | 157 | 7.57e-54 | 177 |
| Msa1134000 | MtrunA17_Chr4g0060931 | 53.012 | 166 | 68 | 4 | 8 | 165 | 10 | 173 | 8.46e-54 | 177 |
| Msa1134000 | MtrunA17_Chr5g0433781 | 43.701 | 254 | 111 | 8 | 13 | 246 | 4 | 245 | 1.18e-53 | 183 |
| Msa1134000 | MtrunA17_Chr7g0243371 | 87.500 | 88 | 11 | 0 | 60 | 147 | 12 | 99 | 1.92e-53 | 168 |
| Msa1134000 | MtrunA17_Chr2g0309331 | 50.617 | 162 | 72 | 3 | 6 | 160 | 1 | 161 | 6.63e-53 | 174 |
| Msa1134000 | MtrunA17_Chr3g0091921 | 49.425 | 174 | 78 | 3 | 6 | 171 | 7 | 178 | 6.89e-53 | 173 |
| Msa1134000 | MtrunA17_Chr4g0017921 | 55.556 | 153 | 58 | 4 | 15 | 160 | 8 | 157 | 8.98e-53 | 174 |
| Msa1134000 | MtrunA17_Chr2g0316971 | 51.250 | 160 | 70 | 2 | 12 | 163 | 20 | 179 | 2.30e-52 | 174 |
| Msa1134000 | MtrunA17_Chr6g0484441 | 44.076 | 211 | 104 | 5 | 12 | 210 | 2 | 210 | 2.35e-52 | 172 |
| Msa1134000 | MtrunA17_Chr6g0481091 | 41.558 | 231 | 102 | 6 | 13 | 235 | 4 | 209 | 2.92e-52 | 169 |
| Msa1134000 | MtrunA17_Chr5g0405211 | 47.849 | 186 | 85 | 5 | 15 | 193 | 8 | 188 | 3.33e-52 | 172 |
| Msa1134000 | MtrunA17_Chr5g0398971 | 52.597 | 154 | 64 | 3 | 15 | 160 | 7 | 159 | 4.80e-52 | 172 |
| Msa1134000 | MtrunA17_Chr8g0384721 | 50.838 | 179 | 73 | 4 | 11 | 179 | 3 | 176 | 9.01e-52 | 169 |
| Msa1134000 | MtrunA17_Chr2g0318081 | 54.658 | 161 | 65 | 3 | 11 | 165 | 12 | 170 | 1.25e-51 | 171 |
| Msa1134000 | MtrunA17_Chr1g0200561 | 51.235 | 162 | 70 | 3 | 15 | 169 | 19 | 178 | 1.82e-51 | 171 |
| Msa1134000 | MtrunA17_Chr4g0056541 | 50.920 | 163 | 71 | 3 | 14 | 169 | 6 | 166 | 2.44e-51 | 171 |
| Msa1134000 | MtrunA17_Chr8g0372121 | 50.299 | 167 | 74 | 4 | 15 | 174 | 6 | 170 | 3.44e-51 | 169 |
| Msa1134000 | MtrunA17_Chr1g0183741 | 45.263 | 190 | 90 | 4 | 15 | 193 | 10 | 196 | 3.84e-51 | 167 |
| Msa1134000 | MtrunA17_Chr6g0453451 | 49.102 | 167 | 75 | 3 | 7 | 165 | 12 | 176 | 6.43e-51 | 168 |
| Msa1134000 | MtrunA17_Chr8g0359921 | 55.769 | 156 | 59 | 4 | 12 | 159 | 11 | 164 | 6.11e-50 | 166 |
| Msa1134000 | MtrunA17_Chr3g0130731 | 54.088 | 159 | 61 | 3 | 11 | 160 | 3 | 158 | 2.01e-49 | 164 |
| Msa1134000 | MtrunA17_Chr6g0461661 | 46.667 | 180 | 82 | 3 | 8 | 179 | 11 | 184 | 3.06e-49 | 166 |
| Msa1134000 | MtrunA17_Chr7g0261411 | 52.055 | 146 | 66 | 2 | 15 | 157 | 10 | 154 | 4.99e-49 | 163 |
| Msa1134000 | MtrunA17_Chr5g0417001 | 47.514 | 181 | 80 | 3 | 1 | 167 | 1 | 180 | 5.17e-49 | 166 |
| Msa1134000 | MtrunA17_Chr8g0346001 | 46.512 | 172 | 72 | 3 | 7 | 160 | 7 | 176 | 7.87e-49 | 166 |
| Msa1134000 | MtrunA17_Chr8g0361731 | 45.604 | 182 | 83 | 3 | 1 | 167 | 1 | 181 | 1.55e-48 | 164 |
| Msa1134000 | MtrunA17_Chr5g0442771 | 50.000 | 184 | 74 | 6 | 8 | 175 | 12 | 193 | 4.67e-48 | 161 |
| Msa1134000 | MtrunA17_Chr2g0312321 | 46.032 | 189 | 76 | 7 | 12 | 190 | 8 | 180 | 6.11e-48 | 160 |
| Msa1134000 | MtrunA17_Chr7g0253011 | 52.229 | 157 | 65 | 4 | 13 | 159 | 15 | 171 | 8.23e-48 | 162 |
| Msa1134000 | MtrunA17_Chr4g0054791 | 44.221 | 199 | 100 | 5 | 15 | 202 | 6 | 204 | 4.26e-47 | 159 |
| Msa1134000 | MtrunA17_Chr5g0400461 | 48.428 | 159 | 72 | 2 | 11 | 159 | 2 | 160 | 5.26e-47 | 159 |
| Msa1134000 | MtrunA17_Chr2g0311651 | 43.350 | 203 | 93 | 5 | 10 | 191 | 16 | 217 | 2.65e-46 | 156 |
| Msa1134000 | MtrunA17_Chr7g0217721 | 46.629 | 178 | 72 | 4 | 9 | 165 | 13 | 188 | 3.31e-46 | 157 |
| Msa1134000 | MtrunA17_Chr3g0130101 | 48.810 | 168 | 70 | 5 | 17 | 173 | 9 | 171 | 6.25e-46 | 156 |
| Msa1134000 | MtrunA17_Chr3g0144271 | 50.968 | 155 | 68 | 3 | 8 | 158 | 16 | 166 | 8.69e-46 | 158 |
| Msa1134000 | MtrunA17_Chr3g0128151 | 46.995 | 183 | 75 | 6 | 15 | 188 | 22 | 191 | 1.87e-45 | 160 |
| Msa1134000 | MtrunA17_Chr5g0428991 | 46.277 | 188 | 79 | 6 | 14 | 192 | 24 | 198 | 5.38e-45 | 159 |
| Msa1134000 | MtrunA17_Chr2g0311661 | 46.857 | 175 | 71 | 5 | 6 | 160 | 13 | 185 | 1.10e-44 | 151 |
| Msa1134000 | MtrunA17_Chr6g0453131 | 46.552 | 174 | 77 | 4 | 1 | 159 | 1 | 173 | 1.17e-44 | 154 |
| Msa1134000 | MtrunA17_Chr7g0217711 | 53.731 | 134 | 57 | 2 | 9 | 139 | 13 | 144 | 1.83e-44 | 147 |
| Msa1134000 | MtrunA17_Chr3g0128111 | 45.509 | 167 | 74 | 4 | 18 | 176 | 45 | 202 | 2.84e-44 | 149 |
| Msa1134000 | MtrunA17_Chr3g0092671 | 49.405 | 168 | 69 | 6 | 17 | 173 | 7 | 169 | 2.48e-43 | 153 |
| Msa1134000 | MtrunA17_Chr1g0197351 | 50.888 | 169 | 65 | 4 | 15 | 168 | 42 | 207 | 3.68e-43 | 152 |
| Msa1134000 | MtrunA17_Chr1g0201021 | 48.810 | 168 | 70 | 5 | 17 | 173 | 21 | 183 | 6.05e-43 | 153 |
| Msa1134000 | MtrunA17_Chr1g0197361 | 47.273 | 165 | 77 | 4 | 17 | 173 | 10 | 172 | 1.20e-42 | 152 |
| Msa1134000 | MtrunA17_Chr8g0364791 | 45.294 | 170 | 79 | 4 | 14 | 173 | 5 | 170 | 2.15e-42 | 149 |
| Msa1134000 | MtrunA17_Chr8g0384201 | 44.118 | 170 | 81 | 4 | 14 | 173 | 5 | 170 | 2.56e-40 | 144 |
| Msa1134000 | MtrunA17_Chr4g0076731 | 47.403 | 154 | 74 | 4 | 17 | 166 | 56 | 206 | 1.55e-39 | 141 |
| Msa1134000 | MtrunA17_Chr8g0345671 | 46.622 | 148 | 70 | 4 | 15 | 156 | 11 | 155 | 3.01e-38 | 137 |
| Msa1134000 | MtrunA17_Chr4g0038751 | 43.558 | 163 | 83 | 4 | 1 | 159 | 4 | 161 | 1.23e-37 | 133 |
| Msa1134000 | MtrunA17_Chr4g0050701 | 41.558 | 154 | 72 | 3 | 15 | 157 | 11 | 157 | 5.95e-36 | 126 |
| Msa1134000 | MtrunA17_Chr8g0345691 | 41.333 | 150 | 79 | 4 | 14 | 157 | 11 | 157 | 4.55e-33 | 124 |
| Msa1134000 | MtrunA17_Chr3g0113001 | 50.000 | 122 | 53 | 3 | 50 | 165 | 3 | 122 | 5.46e-31 | 116 |
| Msa1134000 | MtrunA17_Chr2g0321631 | 41.509 | 159 | 75 | 6 | 16 | 158 | 5 | 161 | 5.75e-31 | 115 |
| Msa1134000 | MtrunA17_Chr4g0026141 | 41.772 | 158 | 77 | 6 | 15 | 158 | 5 | 161 | 1.05e-30 | 114 |
| Msa1134000 | MtrunA17_Chr8g0384351 | 40.506 | 158 | 72 | 6 | 13 | 167 | 8 | 146 | 1.49e-29 | 109 |
| Msa1134000 | MtrunA17_Chr2g0321741 | 46.087 | 115 | 52 | 3 | 46 | 156 | 23 | 131 | 2.72e-29 | 112 |
| Msa1134000 | MtrunA17_Chr7g0266701 | 32.710 | 214 | 103 | 9 | 15 | 192 | 4 | 212 | 3.03e-27 | 105 |
| Msa1134000 | MtrunA17_Chr8g0345711 | 42.636 | 129 | 67 | 3 | 15 | 137 | 12 | 139 | 3.26e-27 | 103 |
| Msa1134000 | MtrunA17_Chr3g0113031 | 51.515 | 99 | 33 | 3 | 77 | 165 | 5 | 98 | 1.27e-26 | 103 |
| Msa1134000 | MtrunA17_Chr8g0345731 | 41.667 | 132 | 67 | 4 | 15 | 137 | 24 | 154 | 1.57e-26 | 101 |
| Msa1134000 | MtrunA17_Chr8g0345721 | 36.774 | 155 | 62 | 3 | 18 | 137 | 38 | 191 | 1.12e-25 | 100 |
| Msa1134000 | MtrunA17_Chr8g0345741 | 36.879 | 141 | 70 | 6 | 28 | 159 | 4 | 134 | 3.66e-23 | 92.0 |
| Msa1134000 | MtrunA17_Chr8g0345701 | 37.419 | 155 | 69 | 6 | 15 | 149 | 7 | 153 | 5.68e-23 | 92.0 |
| Msa1134000 | MtrunA17_Chr3g0130321 | 34.731 | 167 | 75 | 8 | 13 | 157 | 5 | 159 | 7.06e-19 | 82.0 |
| Msa1134000 | MtrunA17_Chr7g0251661 | 35.338 | 133 | 77 | 6 | 10 | 137 | 5 | 133 | 3.95e-18 | 79.0 |
| Msa1134000 | MtrunA17_Chr7g0251651 | 34.177 | 158 | 93 | 7 | 6 | 157 | 10 | 162 | 1.20e-17 | 78.6 |
| Msa1134000 | MtrunA17_Chr7g0251671 | 30.539 | 167 | 103 | 7 | 10 | 171 | 5 | 163 | 1.33e-17 | 77.4 |
| Msa1134000 | MtrunA17_Chr1g0168571 | 34.722 | 144 | 81 | 5 | 23 | 155 | 13 | 154 | 3.53e-16 | 76.6 |
| Msa1134000 | MtrunA17_Chr3g0113011 | 50.000 | 56 | 28 | 0 | 9 | 64 | 13 | 68 | 2.69e-13 | 63.5 |
| Msa1134000 | MtrunA17_Chr2g0282871 | 32.653 | 147 | 71 | 8 | 15 | 139 | 53 | 193 | 1.75e-12 | 65.9 |
| Msa1134000 | MtrunA17_Chr4g0040541 | 31.973 | 147 | 77 | 7 | 15 | 141 | 48 | 191 | 2.81e-12 | 65.1 |
| Msa1134000 | MtrunA17_Chr3g0113041 | 48.214 | 56 | 29 | 0 | 9 | 64 | 13 | 68 | 1.46e-11 | 58.9 |
| Msa1134000 | MtrunA17_Chr4g0046431 | 29.310 | 174 | 97 | 9 | 15 | 166 | 68 | 237 | 2.32e-11 | 62.8 |
| Msa1134000 | MtrunA17_Chr8g0367761 | 30.822 | 146 | 79 | 7 | 15 | 141 | 68 | 210 | 3.52e-11 | 61.6 |
| Msa1134000 | MtrunA17_Chr2g0324961 | 28.141 | 199 | 101 | 11 | 15 | 191 | 49 | 227 | 8.84e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1134000 | AT5G13180.1 | 57.028 | 249 | 90 | 6 | 1 | 235 | 1 | 246 | 3.10e-93 | 275 |
| Msa1134000 | AT2G33480.2 | 73.457 | 162 | 40 | 2 | 1 | 161 | 1 | 160 | 1.16e-86 | 258 |
| Msa1134000 | AT2G33480.1 | 72.561 | 164 | 40 | 2 | 1 | 161 | 1 | 162 | 2.27e-86 | 258 |
| Msa1134000 | AT1G61110.1 | 58.683 | 167 | 50 | 4 | 11 | 159 | 12 | 177 | 6.56e-59 | 189 |
| Msa1134000 | AT3G04070.2 | 55.882 | 170 | 59 | 4 | 6 | 159 | 1 | 170 | 1.83e-58 | 189 |
| Msa1134000 | AT1G69490.1 | 59.006 | 161 | 53 | 4 | 15 | 165 | 9 | 166 | 3.04e-58 | 186 |
| Msa1134000 | AT5G61430.1 | 54.762 | 168 | 66 | 4 | 6 | 165 | 7 | 172 | 7.71e-57 | 184 |
| Msa1134000 | AT1G77450.1 | 52.198 | 182 | 67 | 5 | 6 | 171 | 1 | 178 | 3.07e-56 | 180 |
| Msa1134000 | AT3G04070.1 | 51.613 | 186 | 58 | 4 | 6 | 159 | 1 | 186 | 3.85e-56 | 183 |
| Msa1134000 | AT5G39610.1 | 52.353 | 170 | 71 | 3 | 4 | 165 | 9 | 176 | 4.65e-56 | 181 |
| Msa1134000 | AT5G07680.1 | 54.938 | 162 | 63 | 4 | 12 | 165 | 14 | 173 | 5.34e-56 | 182 |
| Msa1134000 | AT5G07680.2 | 55.975 | 159 | 60 | 4 | 15 | 165 | 3 | 159 | 9.36e-56 | 181 |
| Msa1134000 | AT3G15510.1 | 57.595 | 158 | 50 | 3 | 19 | 159 | 21 | 178 | 2.65e-55 | 181 |
| Msa1134000 | AT1G65910.1 | 41.473 | 258 | 113 | 9 | 13 | 245 | 4 | 248 | 5.61e-55 | 186 |
| Msa1134000 | AT2G24430.2 | 53.704 | 162 | 70 | 2 | 9 | 165 | 10 | 171 | 1.08e-54 | 178 |
| Msa1134000 | AT2G24430.1 | 53.704 | 162 | 70 | 2 | 9 | 165 | 10 | 171 | 1.08e-54 | 178 |
| Msa1134000 | AT1G33280.1 | 53.947 | 152 | 62 | 2 | 15 | 160 | 8 | 157 | 2.69e-54 | 177 |
| Msa1134000 | AT5G17260.1 | 55.128 | 156 | 59 | 3 | 13 | 159 | 4 | 157 | 2.95e-54 | 181 |
| Msa1134000 | AT4G27410.2 | 52.096 | 167 | 72 | 3 | 12 | 172 | 11 | 175 | 6.50e-54 | 176 |
| Msa1134000 | AT3G03200.1 | 47.179 | 195 | 90 | 4 | 13 | 198 | 4 | 194 | 8.84e-54 | 180 |
| Msa1134000 | AT3G18400.1 | 54.088 | 159 | 66 | 4 | 12 | 165 | 2 | 158 | 9.44e-54 | 176 |
| Msa1134000 | AT1G12260.2 | 51.786 | 168 | 71 | 5 | 15 | 174 | 7 | 172 | 1.26e-53 | 176 |
| Msa1134000 | AT4G10350.1 | 54.839 | 155 | 59 | 4 | 15 | 160 | 9 | 161 | 1.81e-53 | 176 |
| Msa1134000 | AT1G54330.1 | 58.170 | 153 | 55 | 3 | 13 | 159 | 4 | 153 | 3.46e-53 | 174 |
| Msa1134000 | AT1G12260.1 | 53.165 | 158 | 65 | 4 | 15 | 165 | 7 | 162 | 4.25e-53 | 176 |
| Msa1134000 | AT1G62700.1 | 52.941 | 170 | 69 | 5 | 14 | 174 | 6 | 173 | 7.88e-53 | 176 |
| Msa1134000 | AT1G62700.2 | 52.941 | 170 | 69 | 5 | 14 | 174 | 6 | 173 | 7.88e-53 | 176 |
| Msa1134000 | AT3G04060.1 | 55.484 | 155 | 60 | 4 | 13 | 159 | 18 | 171 | 1.80e-52 | 173 |
| Msa1134000 | AT1G76420.1 | 52.500 | 160 | 70 | 3 | 12 | 166 | 19 | 177 | 2.29e-52 | 173 |
| Msa1134000 | AT2G18060.3 | 46.569 | 204 | 90 | 7 | 15 | 210 | 9 | 201 | 2.71e-52 | 174 |
| Msa1134000 | AT2G18060.1 | 46.569 | 204 | 90 | 7 | 15 | 210 | 9 | 201 | 2.71e-52 | 174 |
| Msa1134000 | AT5G53950.1 | 53.595 | 153 | 63 | 2 | 15 | 159 | 17 | 169 | 3.75e-52 | 174 |
| Msa1134000 | AT5G18270.2 | 54.194 | 155 | 62 | 3 | 13 | 159 | 19 | 172 | 4.23e-52 | 172 |
| Msa1134000 | AT5G66300.1 | 53.012 | 166 | 66 | 5 | 4 | 160 | 1 | 163 | 6.15e-52 | 171 |
| Msa1134000 | AT5G18270.1 | 54.194 | 155 | 62 | 3 | 13 | 159 | 19 | 172 | 8.68e-52 | 171 |
| Msa1134000 | AT5G62380.2 | 54.777 | 157 | 58 | 6 | 13 | 160 | 5 | 157 | 1.16e-51 | 171 |
| Msa1134000 | AT5G62380.1 | 54.777 | 157 | 58 | 6 | 13 | 160 | 5 | 157 | 1.16e-51 | 171 |
| Msa1134000 | AT1G01720.1 | 53.939 | 165 | 63 | 4 | 13 | 167 | 5 | 166 | 1.37e-51 | 169 |
| Msa1134000 | AT3G15170.1 | 51.923 | 156 | 67 | 3 | 12 | 159 | 17 | 172 | 2.23e-51 | 170 |
| Msa1134000 | AT4G36160.2 | 51.534 | 163 | 68 | 4 | 15 | 168 | 14 | 174 | 3.18e-51 | 171 |
| Msa1134000 | AT3G17730.1 | 52.258 | 155 | 64 | 3 | 13 | 159 | 4 | 156 | 3.30e-51 | 167 |
| Msa1134000 | AT4G36160.1 | 51.534 | 163 | 68 | 4 | 15 | 168 | 10 | 170 | 3.79e-51 | 171 |
| Msa1134000 | AT4G36160.3 | 51.534 | 163 | 68 | 4 | 15 | 168 | 10 | 170 | 3.79e-51 | 171 |
| Msa1134000 | AT4G27410.3 | 47.826 | 184 | 71 | 4 | 12 | 172 | 11 | 192 | 4.62e-51 | 169 |
| Msa1134000 | AT5G46590.1 | 51.899 | 158 | 66 | 3 | 11 | 159 | 2 | 158 | 5.36e-51 | 168 |
| Msa1134000 | AT1G33060.1 | 46.429 | 196 | 83 | 5 | 15 | 197 | 24 | 210 | 1.00e-50 | 175 |
| Msa1134000 | AT1G33060.2 | 46.429 | 196 | 83 | 5 | 15 | 197 | 24 | 210 | 1.07e-50 | 175 |
| Msa1134000 | AT1G52890.1 | 52.500 | 160 | 68 | 3 | 12 | 165 | 11 | 168 | 1.19e-50 | 168 |
| Msa1134000 | AT1G71930.2 | 51.974 | 152 | 64 | 3 | 15 | 159 | 9 | 158 | 1.59e-50 | 168 |
| Msa1134000 | AT1G71930.1 | 51.974 | 152 | 64 | 3 | 15 | 159 | 9 | 158 | 1.59e-50 | 168 |
| Msa1134000 | AT1G79580.3 | 50.625 | 160 | 72 | 2 | 7 | 160 | 9 | 167 | 1.74e-50 | 169 |
| Msa1134000 | AT1G79580.5 | 50.625 | 160 | 72 | 2 | 7 | 160 | 9 | 167 | 1.74e-50 | 169 |
| Msa1134000 | AT1G79580.4 | 50.625 | 160 | 72 | 2 | 7 | 160 | 9 | 167 | 1.74e-50 | 169 |
| Msa1134000 | AT1G79580.2 | 50.625 | 160 | 72 | 2 | 7 | 160 | 9 | 167 | 1.74e-50 | 169 |
| Msa1134000 | AT1G79580.1 | 50.625 | 160 | 72 | 2 | 7 | 160 | 9 | 167 | 1.74e-50 | 169 |
| Msa1134000 | AT3G12977.1 | 51.250 | 160 | 69 | 4 | 12 | 164 | 15 | 172 | 2.50e-50 | 166 |
| Msa1134000 | AT5G63790.1 | 46.860 | 207 | 89 | 5 | 2 | 197 | 37 | 233 | 3.41e-50 | 167 |
| Msa1134000 | AT2G46770.1 | 40.529 | 227 | 110 | 5 | 1 | 205 | 2 | 225 | 3.82e-50 | 168 |
| Msa1134000 | AT5G63790.2 | 46.860 | 207 | 89 | 5 | 2 | 197 | 47 | 243 | 4.45e-50 | 167 |
| Msa1134000 | AT3G29035.1 | 50.898 | 167 | 72 | 3 | 7 | 165 | 16 | 180 | 6.66e-50 | 166 |
| Msa1134000 | AT1G52880.1 | 54.321 | 162 | 58 | 3 | 19 | 164 | 21 | 182 | 1.62e-49 | 165 |
| Msa1134000 | AT3G10500.1 | 51.479 | 169 | 68 | 4 | 15 | 173 | 9 | 173 | 3.23e-49 | 170 |
| Msa1134000 | AT3G10480.1 | 52.469 | 162 | 66 | 3 | 15 | 167 | 27 | 186 | 6.04e-49 | 167 |
| Msa1134000 | AT4G35580.3 | 44.651 | 215 | 89 | 6 | 15 | 218 | 9 | 204 | 7.14e-49 | 169 |
| Msa1134000 | AT3G10490.1 | 51.852 | 162 | 67 | 3 | 15 | 167 | 27 | 186 | 7.14e-49 | 161 |
| Msa1134000 | AT4G35580.2 | 44.651 | 215 | 89 | 6 | 15 | 218 | 9 | 204 | 7.48e-49 | 168 |
| Msa1134000 | AT3G15500.1 | 51.553 | 161 | 70 | 3 | 12 | 166 | 11 | 169 | 7.98e-49 | 163 |
| Msa1134000 | AT5G04410.1 | 52.096 | 167 | 70 | 3 | 15 | 173 | 9 | 173 | 8.01e-49 | 169 |
| Msa1134000 | AT4G35580.1 | 44.651 | 215 | 89 | 6 | 15 | 218 | 9 | 204 | 8.83e-49 | 168 |
| Msa1134000 | AT4G17980.1 | 49.057 | 159 | 71 | 2 | 11 | 159 | 2 | 160 | 2.25e-48 | 160 |
| Msa1134000 | AT4G17980.2 | 49.057 | 159 | 71 | 2 | 11 | 159 | 2 | 160 | 2.65e-48 | 161 |
| Msa1134000 | AT5G08790.1 | 45.972 | 211 | 86 | 6 | 12 | 197 | 4 | 211 | 4.58e-48 | 160 |
| Msa1134000 | AT2G33480.3 | 69.524 | 105 | 27 | 2 | 60 | 161 | 3 | 105 | 8.08e-48 | 157 |
| Msa1134000 | AT3G10480.2 | 52.174 | 161 | 67 | 3 | 15 | 167 | 27 | 185 | 8.18e-48 | 164 |
| Msa1134000 | AT3G61910.1 | 45.143 | 175 | 72 | 5 | 7 | 159 | 3 | 175 | 8.55e-48 | 161 |
| Msa1134000 | AT1G56010.2 | 47.853 | 163 | 73 | 4 | 12 | 164 | 16 | 176 | 1.18e-47 | 160 |
| Msa1134000 | AT5G46590.2 | 51.034 | 145 | 65 | 2 | 11 | 150 | 2 | 145 | 1.63e-47 | 159 |
| Msa1134000 | AT1G32770.1 | 46.471 | 170 | 70 | 4 | 10 | 160 | 11 | 178 | 2.13e-47 | 160 |
| Msa1134000 | AT5G39820.1 | 39.827 | 231 | 107 | 6 | 2 | 205 | 8 | 233 | 3.21e-47 | 160 |
| Msa1134000 | AT3G10490.2 | 51.852 | 162 | 67 | 3 | 15 | 167 | 27 | 186 | 3.93e-47 | 162 |
| Msa1134000 | AT4G28530.1 | 47.305 | 167 | 68 | 4 | 14 | 161 | 9 | 174 | 9.59e-45 | 154 |
| Msa1134000 | AT1G26870.1 | 41.872 | 203 | 98 | 4 | 15 | 197 | 16 | 218 | 2.72e-44 | 154 |
| Msa1134000 | AT3G10480.3 | 43.590 | 195 | 66 | 3 | 15 | 167 | 27 | 219 | 3.61e-44 | 156 |
| Msa1134000 | AT1G32510.1 | 39.130 | 230 | 117 | 5 | 15 | 222 | 6 | 234 | 6.71e-44 | 149 |
| Msa1134000 | AT1G34190.1 | 49.701 | 167 | 70 | 5 | 17 | 173 | 18 | 180 | 1.01e-43 | 155 |
| Msa1134000 | AT1G34180.3 | 48.795 | 166 | 73 | 4 | 17 | 173 | 18 | 180 | 4.32e-43 | 151 |
| Msa1134000 | AT1G34180.1 | 48.795 | 166 | 73 | 4 | 17 | 173 | 18 | 180 | 2.60e-42 | 151 |
| Msa1134000 | AT1G34180.4 | 45.506 | 178 | 73 | 4 | 17 | 173 | 18 | 192 | 4.05e-42 | 149 |
| Msa1134000 | AT3G49530.2 | 46.405 | 153 | 73 | 3 | 15 | 159 | 13 | 164 | 4.50e-42 | 148 |
| Msa1134000 | AT5G24590.2 | 47.059 | 170 | 71 | 5 | 15 | 170 | 13 | 177 | 4.71e-42 | 149 |
| Msa1134000 | AT3G49530.1 | 46.405 | 153 | 73 | 3 | 15 | 159 | 13 | 164 | 6.05e-42 | 149 |
| Msa1134000 | AT5G64060.1 | 45.087 | 173 | 81 | 4 | 11 | 173 | 2 | 170 | 1.19e-41 | 145 |
| Msa1134000 | AT5G09330.5 | 43.590 | 195 | 94 | 5 | 11 | 193 | 2 | 192 | 1.27e-41 | 148 |
| Msa1134000 | AT5G09330.2 | 43.590 | 195 | 94 | 5 | 11 | 193 | 2 | 192 | 1.27e-41 | 148 |
| Msa1134000 | AT5G09330.4 | 43.590 | 195 | 94 | 5 | 11 | 193 | 2 | 192 | 1.27e-41 | 148 |
| Msa1134000 | AT5G09330.3 | 43.590 | 195 | 94 | 5 | 11 | 193 | 2 | 192 | 1.27e-41 | 148 |
| Msa1134000 | AT5G09330.1 | 43.590 | 195 | 94 | 5 | 11 | 193 | 2 | 192 | 1.27e-41 | 148 |
| Msa1134000 | AT1G34180.2 | 45.506 | 178 | 73 | 4 | 17 | 173 | 18 | 192 | 1.79e-41 | 149 |
| Msa1134000 | AT3G12910.1 | 47.826 | 161 | 64 | 5 | 17 | 157 | 23 | 183 | 1.86e-41 | 144 |
| Msa1134000 | AT2G17040.1 | 48.980 | 147 | 69 | 3 | 17 | 159 | 8 | 152 | 2.88e-41 | 142 |
| Msa1134000 | AT2G43000.1 | 49.324 | 148 | 66 | 4 | 17 | 157 | 20 | 165 | 3.20e-41 | 142 |
| Msa1134000 | AT2G02450.1 | 49.333 | 150 | 70 | 4 | 17 | 162 | 53 | 200 | 1.71e-40 | 143 |
| Msa1134000 | AT2G02450.2 | 49.333 | 150 | 70 | 4 | 17 | 162 | 53 | 200 | 2.74e-40 | 143 |
| Msa1134000 | AT5G22290.1 | 36.406 | 217 | 128 | 4 | 17 | 228 | 23 | 234 | 9.81e-39 | 137 |
| Msa1134000 | AT2G27300.1 | 44.521 | 146 | 71 | 3 | 15 | 156 | 14 | 153 | 1.33e-36 | 132 |
| Msa1134000 | AT3G44290.2 | 42.236 | 161 | 80 | 4 | 17 | 173 | 16 | 167 | 1.95e-36 | 129 |
| Msa1134000 | AT5G04395.1 | 44.828 | 145 | 63 | 2 | 12 | 139 | 25 | 169 | 7.67e-36 | 126 |
| Msa1134000 | AT3G44290.1 | 42.236 | 161 | 80 | 4 | 17 | 173 | 16 | 167 | 1.35e-35 | 129 |
| Msa1134000 | AT4G10350.2 | 56.566 | 99 | 38 | 2 | 65 | 160 | 18 | 114 | 2.70e-35 | 127 |
| Msa1134000 | AT5G61430.2 | 56.604 | 106 | 39 | 3 | 65 | 165 | 6 | 109 | 2.35e-34 | 124 |
| Msa1134000 | AT1G32870.2 | 45.000 | 180 | 83 | 6 | 4 | 173 | 1 | 174 | 4.37e-33 | 125 |
| Msa1134000 | AT1G32870.1 | 45.000 | 180 | 83 | 6 | 4 | 173 | 1 | 174 | 4.37e-33 | 125 |
| Msa1134000 | AT1G32870.3 | 45.000 | 180 | 83 | 6 | 4 | 173 | 37 | 210 | 7.23e-33 | 125 |
| Msa1134000 | AT5G64530.1 | 39.634 | 164 | 69 | 4 | 13 | 157 | 1 | 153 | 1.53e-32 | 117 |
| Msa1134000 | AT3G12977.2 | 55.340 | 103 | 40 | 3 | 66 | 164 | 19 | 119 | 5.20e-32 | 117 |
| Msa1134000 | AT5G64530.2 | 44.961 | 129 | 58 | 3 | 13 | 139 | 1 | 118 | 1.08e-31 | 114 |
| Msa1134000 | AT1G56010.1 | 49.524 | 105 | 45 | 2 | 66 | 164 | 7 | 109 | 1.72e-30 | 114 |
| Msa1134000 | AT4G01550.1 | 37.158 | 183 | 97 | 6 | 18 | 192 | 7 | 179 | 2.82e-29 | 114 |
| Msa1134000 | AT5G14000.1 | 36.970 | 165 | 98 | 4 | 1 | 162 | 1 | 162 | 3.48e-29 | 109 |
| Msa1134000 | AT5G14000.2 | 38.312 | 154 | 90 | 3 | 1 | 151 | 1 | 152 | 1.16e-28 | 106 |
| Msa1134000 | AT1G02230.1 | 39.548 | 177 | 87 | 8 | 16 | 184 | 4 | 168 | 1.17e-28 | 111 |
| Msa1134000 | AT5G50820.1 | 39.860 | 143 | 79 | 3 | 5 | 145 | 7 | 144 | 1.01e-27 | 105 |
| Msa1134000 | AT1G02250.1 | 42.105 | 152 | 76 | 5 | 16 | 159 | 4 | 151 | 3.21e-27 | 107 |
| Msa1134000 | AT4G01520.1 | 38.728 | 173 | 90 | 7 | 16 | 178 | 5 | 171 | 1.37e-26 | 105 |
| Msa1134000 | AT4G01540.4 | 39.181 | 171 | 88 | 7 | 18 | 178 | 7 | 171 | 2.42e-26 | 105 |
| Msa1134000 | AT4G01540.2 | 39.181 | 171 | 88 | 7 | 18 | 178 | 7 | 171 | 2.73e-26 | 106 |
| Msa1134000 | AT4G01540.3 | 40.719 | 167 | 81 | 8 | 18 | 174 | 7 | 165 | 3.51e-26 | 105 |
| Msa1134000 | AT4G01540.1 | 40.719 | 167 | 81 | 8 | 18 | 174 | 7 | 165 | 3.54e-26 | 106 |
| Msa1134000 | AT5G22380.1 | 38.462 | 156 | 79 | 5 | 18 | 158 | 8 | 161 | 4.97e-25 | 99.4 |
| Msa1134000 | AT3G44350.2 | 37.975 | 158 | 83 | 5 | 15 | 159 | 5 | 160 | 7.88e-25 | 99.0 |
| Msa1134000 | AT3G04420.2 | 39.073 | 151 | 81 | 5 | 16 | 159 | 4 | 150 | 2.20e-24 | 99.0 |
| Msa1134000 | AT3G04420.1 | 39.073 | 151 | 81 | 5 | 16 | 159 | 4 | 150 | 2.36e-24 | 99.8 |
| Msa1134000 | AT3G44350.1 | 39.568 | 139 | 73 | 4 | 15 | 144 | 5 | 141 | 6.65e-23 | 91.7 |
| Msa1134000 | AT4G28530.2 | 40.310 | 129 | 58 | 3 | 14 | 123 | 9 | 137 | 9.49e-23 | 95.1 |
| Msa1134000 | AT2G18060.2 | 42.276 | 123 | 58 | 5 | 90 | 210 | 2 | 113 | 4.49e-22 | 92.4 |
| Msa1134000 | AT1G02220.1 | 38.125 | 160 | 77 | 7 | 16 | 165 | 4 | 151 | 7.39e-22 | 93.6 |
| Msa1134000 | AT3G10490.4 | 50.575 | 87 | 37 | 2 | 85 | 167 | 2 | 86 | 1.72e-21 | 92.0 |
| Msa1134000 | AT3G10490.3 | 50.575 | 87 | 37 | 2 | 85 | 167 | 2 | 86 | 1.72e-21 | 92.0 |
| Msa1134000 | AT2G43000.2 | 49.412 | 85 | 37 | 3 | 77 | 157 | 5 | 87 | 2.42e-19 | 83.6 |
| Msa1134000 | AT1G01010.1 | 34.810 | 158 | 80 | 7 | 18 | 159 | 6 | 156 | 4.48e-17 | 80.1 |
| Msa1134000 | AT3G55210.1 | 33.143 | 175 | 85 | 8 | 15 | 166 | 11 | 176 | 1.44e-16 | 77.4 |
| Msa1134000 | AT5G22290.2 | 34.532 | 139 | 85 | 3 | 91 | 228 | 2 | 135 | 4.62e-16 | 75.5 |
| Msa1134000 | AT3G56530.1 | 35.032 | 157 | 87 | 7 | 12 | 158 | 49 | 200 | 2.62e-15 | 74.3 |
| Msa1134000 | AT5G41090.1 | 27.950 | 161 | 94 | 5 | 15 | 160 | 8 | 161 | 7.93e-14 | 68.9 |
| Msa1134000 | AT5G14000.3 | 50.000 | 62 | 31 | 0 | 1 | 62 | 1 | 62 | 2.73e-13 | 68.2 |
| Msa1134000 | AT4G29230.2 | 31.034 | 174 | 89 | 9 | 13 | 159 | 45 | 214 | 6.90e-13 | 68.2 |
| Msa1134000 | AT4G29230.1 | 31.034 | 174 | 89 | 9 | 13 | 159 | 46 | 215 | 7.10e-13 | 68.2 |
| Msa1134000 | AT4G29230.3 | 31.034 | 174 | 89 | 9 | 13 | 159 | 46 | 215 | 1.20e-12 | 67.4 |
| Msa1134000 | AT1G28470.1 | 32.927 | 164 | 87 | 10 | 15 | 159 | 77 | 236 | 1.21e-12 | 66.6 |
| Msa1134000 | AT5G56620.3 | 30.573 | 157 | 76 | 7 | 13 | 139 | 41 | 194 | 1.40e-11 | 63.9 |
| Msa1134000 | AT5G56620.2 | 30.573 | 157 | 76 | 7 | 13 | 139 | 41 | 194 | 1.64e-11 | 63.9 |
| Msa1134000 | AT5G56620.1 | 30.573 | 157 | 76 | 7 | 13 | 139 | 41 | 194 | 1.89e-11 | 63.5 |
| Msa1134000 | AT3G04430.1 | 31.206 | 141 | 82 | 4 | 21 | 147 | 6 | 145 | 6.26e-11 | 60.5 |
| Msa1134000 | AT4G28500.1 | 30.303 | 165 | 91 | 8 | 15 | 159 | 59 | 219 | 7.54e-11 | 61.6 |
Find 89 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCATCCTCATCCTCTTT+TGG | 0.172089 | 7_4:+366961 | Msa1134000:CDS |
| TCTTAATGCCGACCTCATTT+TGG | 0.179661 | 7_4:-367078 | None:intergenic |
| TCGGTTCCCATTTGGGTATT+TGG | 0.189837 | 7_4:-366378 | None:intergenic |
| CTGTTAGATCGGTTCCCATT+TGG | 0.268180 | 7_4:-366386 | None:intergenic |
| ATTTGGATTCTTATATTAGA+TGG | 0.293501 | 7_4:-367169 | None:intergenic |
| ATAAAAGGAAGGGGAGGGAG+GGG | 0.307261 | 7_4:-367002 | None:intergenic |
| TAGACAGACCTAATAATAAA+AGG | 0.323180 | 7_4:-367017 | None:intergenic |
| AGAAAAGAAAGGAAAGGAAA+AGG | 0.323254 | 7_4:-365746 | None:intergenic |
| TGTTAGATCGGTTCCCATTT+GGG | 0.328133 | 7_4:-366385 | None:intergenic |
| CACTTACAGAATCTCTTAAA+AGG | 0.329098 | 7_4:-367213 | None:intergenic |
| GAGCTACAAACTCTGGTTAC+TGG | 0.339051 | 7_4:+366408 | Msa1134000:CDS |
| GAAAAGAAAGGAAAGGAAAA+GGG | 0.352536 | 7_4:-365745 | None:intergenic |
| ATCTTTGCAAGTCTGATCCT+TGG | 0.370348 | 7_4:+366136 | Msa1134000:CDS |
| AGGTGAAGAAGGAAGAGAAA+AGG | 0.387206 | 7_4:-365807 | None:intergenic |
| CCAAGCAGTTGCAGCAACTT+TGG | 0.391601 | 7_4:+366766 | Msa1134000:CDS |
| TCTTTGCAAGTCTGATCCTT+GGG | 0.393386 | 7_4:+366137 | Msa1134000:CDS |
| TAATAAAAGGAAGGGGAGGG+AGG | 0.405142 | 7_4:-367004 | None:intergenic |
| CAGTGGAATCACAAATGAAT+TGG | 0.418146 | 7_4:+366906 | Msa1134000:CDS |
| AGAATAAAGAAAGGTGAAGA+AGG | 0.432395 | 7_4:-365818 | None:intergenic |
| GGTGAAGAAGGAAGAGAAAA+GGG | 0.437863 | 7_4:-365806 | None:intergenic |
| TTAAGCATTATTTCCAAAAG+AGG | 0.440986 | 7_4:-366974 | None:intergenic |
| TAAAAGGAAGGGGAGGGAGG+GGG | 0.442503 | 7_4:-367001 | None:intergenic |
| AAAGAAGCCAAATACCCAAA+TGG | 0.451382 | 7_4:+366371 | Msa1134000:CDS |
| TCTGGTTACTGGAAAGCAAC+TGG | 0.454286 | 7_4:+366419 | Msa1134000:CDS |
| TCAAAGAGTCATGAAGTTGT+TGG | 0.455914 | 7_4:+366464 | Msa1134000:CDS |
| GACTTGCAAAGATCAACTTC+AGG | 0.465462 | 7_4:-366126 | None:intergenic |
| AAGATCAACTTCAGGAATGA+TGG | 0.468508 | 7_4:-366118 | None:intergenic |
| TTTCTATGATTTCTTGGCAC+AGG | 0.468739 | 7_4:+366843 | Msa1134000:CDS |
| CTTCATCAGTTGGATGGAAA+CGG | 0.481185 | 7_4:-366041 | None:intergenic |
| TTCCTCTCACTCCAACCCCT+TGG | 0.484311 | 7_4:+366571 | Msa1134000:CDS |
| GAAAGTGAAAAGAGAGAGAA+GGG | 0.488212 | 7_4:+365597 | Msa1134000:five_prime_UTR |
| AATAAAAGGAAGGGGAGGGA+GGG | 0.488281 | 7_4:-367003 | None:intergenic |
| CCAAAGTTGCTGCAACTGCT+TGG | 0.489565 | 7_4:-366766 | None:intergenic |
| ACAACAAGTTCTTCATCAGT+TGG | 0.490523 | 7_4:-366051 | None:intergenic |
| CTCAAATTCAAGTTCAAAAG+TGG | 0.493719 | 7_4:+366816 | Msa1134000:CDS |
| TTTGTGATTCCACTGCTAGC+TGG | 0.494748 | 7_4:-366898 | None:intergenic |
| AAGAAGCCAAATACCCAAAT+GGG | 0.499342 | 7_4:+366372 | Msa1134000:CDS |
| ATTATTTCCAAAAGAGGATG+AGG | 0.507684 | 7_4:-366968 | None:intergenic |
| CGACATTTGTTTGAGTTGAG+TGG | 0.507813 | 7_4:-365636 | None:intergenic |
| GAATGATGGAAGCAGGTAAA+GGG | 0.510410 | 7_4:-366104 | None:intergenic |
| CAAGTTCTTCATCAGTTGGA+TGG | 0.512113 | 7_4:-366047 | None:intergenic |
| GGTTGGAGTGAGAGGAAGTG+AGG | 0.514880 | 7_4:-366565 | None:intergenic |
| GAAAGGAAAGGAAAAGGGCA+TGG | 0.515086 | 7_4:-365740 | None:intergenic |
| ATCTGAAATGTCCCAAAATG+AGG | 0.522416 | 7_4:+367066 | Msa1134000:three_prime_UTR |
| ACTGCTAGCTGGTGAGGAGG+AGG | 0.524725 | 7_4:-366887 | None:intergenic |
| TGAAAGTGAAAAGAGAGAGA+AGG | 0.525592 | 7_4:+365596 | Msa1134000:five_prime_UTR |
| AGTTTGTAGCTCTGTTAGAT+CGG | 0.532621 | 7_4:-366397 | None:intergenic |
| GGAATGATGGAAGCAGGTAA+AGG | 0.533367 | 7_4:-366105 | None:intergenic |
| GAATAGAATAGAATAAAGAA+AGG | 0.542048 | 7_4:-365827 | None:intergenic |
| ACTTCAGGAATGATGGAAGC+AGG | 0.542259 | 7_4:-366111 | None:intergenic |
| CAGACCTAATAATAAAAGGA+AGG | 0.543501 | 7_4:-367013 | None:intergenic |
| TACAGAATCTCTTAAAAGGA+GGG | 0.547157 | 7_4:-367209 | None:intergenic |
| GACCAAGGGGTTGGAGTGAG+AGG | 0.548262 | 7_4:-366573 | None:intergenic |
| CTCATGGTTCAAGAACTGAT+TGG | 0.548704 | 7_4:+366525 | Msa1134000:CDS |
| AGAAAGACTGACCAAGGGGT+TGG | 0.548887 | 7_4:-366582 | None:intergenic |
| GTTGGATGGAAACGGAAACC+TGG | 0.549587 | 7_4:-366033 | None:intergenic |
| TTTGTCGCATATTTCTGAAG+AGG | 0.550659 | 7_4:+366707 | Msa1134000:CDS |
| TGTTCAATACTTGAAGCGTA+AGG | 0.550952 | 7_4:+366071 | Msa1134000:CDS |
| AGACCTAATAATAAAAGGAA+GGG | 0.556819 | 7_4:-367012 | None:intergenic |
| ATAATAAAGAAAGAAAAGAA+AGG | 0.557362 | 7_4:-365757 | None:intergenic |
| TCTAACAGAGCTACAAACTC+TGG | 0.560803 | 7_4:+366401 | Msa1134000:CDS |
| AAAGAAAGAAAAGAAAGGAA+AGG | 0.563571 | 7_4:-365752 | None:intergenic |
| TTTCCAAAAGAGGATGAGGA+TGG | 0.565330 | 7_4:-366964 | None:intergenic |
| TTACAGAATCTCTTAAAAGG+AGG | 0.569875 | 7_4:-367210 | None:intergenic |
| TCTGATCCTTGGGATTTACC+TGG | 0.570788 | 7_4:+366147 | Msa1134000:CDS |
| GACCTAATAATAAAAGGAAG+GGG | 0.571777 | 7_4:-367011 | None:intergenic |
| GATTCCACTGCTAGCTGGTG+AGG | 0.572585 | 7_4:-366893 | None:intergenic |
| AAATTCAAGTTCAAAAGTGG+TGG | 0.574345 | 7_4:+366819 | Msa1134000:CDS |
| TCCTCCTCACCAGCTAGCAG+TGG | 0.575561 | 7_4:+366889 | Msa1134000:CDS |
| CGCATATTTCTGAAGAGGAG+AGG | 0.580940 | 7_4:+366712 | Msa1134000:CDS |
| TACAGAGGCAAACCACCTCA+TGG | 0.581454 | 7_4:+366509 | Msa1134000:CDS |
| CTAATAATAAAAGGAAGGGG+AGG | 0.584791 | 7_4:-367008 | None:intergenic |
| ACAGAATCTCTTAAAAGGAG+GGG | 0.595413 | 7_4:-367208 | None:intergenic |
| TCCACTGCTAGCTGGTGAGG+AGG | 0.609090 | 7_4:-366890 | None:intergenic |
| ACTGTGGTGTGTCACAATCA+TGG | 0.614833 | 7_4:+367249 | Msa1134000:three_prime_UTR |
| TACATACCAGGTAAATCCCA+AGG | 0.614952 | 7_4:-366153 | None:intergenic |
| TCAGTTCTTGAACCATGAGG+TGG | 0.615010 | 7_4:-366521 | None:intergenic |
| TAGGTGATTTGGAACAAGAG+AGG | 0.615569 | 7_4:+366333 | Msa1134000:intron |
| GAACTTGTTTACCACACGAG+TGG | 0.627379 | 7_4:+365911 | Msa1134000:five_prime_UTR |
| GAAATGTCCCAAAATGAGGT+CGG | 0.628874 | 7_4:+367070 | Msa1134000:three_prime_UTR |
| GGTGAAGTGAGATTGCCACC+AGG | 0.631641 | 7_4:+366015 | Msa1134000:CDS |
| TAATAATAAAAGGAAGGGGA+GGG | 0.640264 | 7_4:-367007 | None:intergenic |
| CAGTTGCAGCAACTTTGGTG+AGG | 0.652051 | 7_4:+366771 | Msa1134000:CDS |
| AAATGTCAAAGCCACTCGTG+TGG | 0.666435 | 7_4:-365922 | None:intergenic |
| ATATTTCTGAAGAGGAGAGG+TGG | 0.674268 | 7_4:+366715 | Msa1134000:CDS |
| ATGGGTCAATGAGTCTGACA+AGG | 0.679300 | 7_4:-365681 | None:intergenic |
| CAATCAGTTCTTGAACCATG+AGG | 0.707588 | 7_4:-366524 | None:intergenic |
| GGATGGAAACGGAAACCTGG+TGG | 0.721884 | 7_4:-366030 | None:intergenic |
| GTGTATGTTTGATATCACTG+TGG | 0.783042 | 7_4:+367233 | Msa1134000:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAATTAATATTAATATGAA+TGG | + | chr7_4:366649-366668 | Msa1134000:intron | 10.0% |
| !! | TGAATTAATATTAATATGAA+TGG | + | chr7_4:366649-366668 | Msa1134000:intron | 10.0% |
| !! | ATAATAAAGAAAGAAAAGAA+AGG | - | chr7_4:365760-365779 | None:intergenic | 15.0% |
| !! | TTATAAATGAAGAAAAGAAA+AGG | - | chr7_4:366179-366198 | None:intergenic | 15.0% |
| !!! | TGAATTTGTTTGTAATTTAA+AGG | + | chr7_4:366614-366633 | Msa1134000:intron | 15.0% |
| !! | AATATTAATATGAATGGAAT+TGG | + | chr7_4:366655-366674 | Msa1134000:intron | 15.0% |
| !! | ATATTAATATGAATGGAATT+GGG | + | chr7_4:366656-366675 | Msa1134000:intron | 15.0% |
| !!! | GAAAATAAAGAATTTTCATT+TGG | - | chr7_4:367189-367208 | None:intergenic | 15.0% |
| !! | ATAATAAAGAAAGAAAAGAA+AGG | - | chr7_4:365760-365779 | None:intergenic | 15.0% |
| !! | TTATAAATGAAGAAAAGAAA+AGG | - | chr7_4:366179-366198 | None:intergenic | 15.0% |
| !!! | TGAATTTGTTTGTAATTTAA+AGG | + | chr7_4:366614-366633 | Msa1134000:intron | 15.0% |
| !! | AATATTAATATGAATGGAAT+TGG | + | chr7_4:366655-366674 | Msa1134000:intron | 15.0% |
| !! | ATATTAATATGAATGGAATT+GGG | + | chr7_4:366656-366675 | Msa1134000:intron | 15.0% |
| !!! | GAAAATAAAGAATTTTCATT+TGG | - | chr7_4:367189-367208 | None:intergenic | 15.0% |
| !! | GAATAGAATAGAATAAAGAA+AGG | - | chr7_4:365830-365849 | None:intergenic | 20.0% |
| !! | AAAAGAAAAAGAAGATAAGA+TGG | + | chr7_4:365966-365985 | Msa1134000:exon | 20.0% |
| !!! | GGATTAATTCTTTTTCTTTT+AGG | + | chr7_4:366314-366333 | Msa1134000:intron | 20.0% |
| !! | ATTTGTTTGTAATTTAAAGG+TGG | + | chr7_4:366617-366636 | Msa1134000:intron | 20.0% |
| !! | ATTTGGATTCTTATATTAGA+TGG | - | chr7_4:367172-367191 | None:intergenic | 20.0% |
| !! | GAATAGAATAGAATAAAGAA+AGG | - | chr7_4:365830-365849 | None:intergenic | 20.0% |
| !! | AAAAGAAAAAGAAGATAAGA+TGG | + | chr7_4:365966-365985 | Msa1134000:exon | 20.0% |
| !!! | GGATTAATTCTTTTTCTTTT+AGG | + | chr7_4:366314-366333 | Msa1134000:intron | 20.0% |
| !! | ATTTGTTTGTAATTTAAAGG+TGG | + | chr7_4:366617-366636 | Msa1134000:intron | 20.0% |
| !! | ATTTGGATTCTTATATTAGA+TGG | - | chr7_4:367172-367191 | None:intergenic | 20.0% |
| !! | GTGTCTTCTTTTATAGTAAT+GGG | - | chr7_4:365702-365721 | None:intergenic | 25.0% |
| !! | TGTGTCTTCTTTTATAGTAA+TGG | - | chr7_4:365703-365722 | None:intergenic | 25.0% |
| ! | AAAGAAAGAAAAGAAAGGAA+AGG | - | chr7_4:365755-365774 | None:intergenic | 25.0% |
| !! | CTTTGCTACAACTTTTTAAT+GGG | + | chr7_4:365869-365888 | Msa1134000:five_prime_UTR | 25.0% |
| !! | ATGAATTTTGTGAAGAAGAA+TGG | + | chr7_4:365994-366013 | Msa1134000:CDS | 25.0% |
| !!! | TCTTTTTCTTTTAGGTGATT+TGG | + | chr7_4:366322-366341 | Msa1134000:intron | 25.0% |
| !! | TCTTTTTGCAGAATGAAAAT+TGG | + | chr7_4:366680-366699 | Msa1134000:intron | 25.0% |
| !! | CTTTTTGCAGAATGAAAATT+GGG | + | chr7_4:366681-366700 | Msa1134000:intron | 25.0% |
| ! | TTAAGCATTATTTCCAAAAG+AGG | - | chr7_4:366977-366996 | None:intergenic | 25.0% |
| ! | AGACCTAATAATAAAAGGAA+GGG | - | chr7_4:367015-367034 | None:intergenic | 25.0% |
| ! | TAGACAGACCTAATAATAAA+AGG | - | chr7_4:367020-367039 | None:intergenic | 25.0% |
| !!! | CATTTTTCAATAAATCACGA+TGG | - | chr7_4:367279-367298 | None:intergenic | 25.0% |
| !! | GTGTCTTCTTTTATAGTAAT+GGG | - | chr7_4:365702-365721 | None:intergenic | 25.0% |
| !! | TGTGTCTTCTTTTATAGTAA+TGG | - | chr7_4:365703-365722 | None:intergenic | 25.0% |
| ! | AAAGAAAGAAAAGAAAGGAA+AGG | - | chr7_4:365755-365774 | None:intergenic | 25.0% |
| !! | CTTTGCTACAACTTTTTAAT+GGG | + | chr7_4:365869-365888 | Msa1134000:five_prime_UTR | 25.0% |
| !! | ATGAATTTTGTGAAGAAGAA+TGG | + | chr7_4:365994-366013 | Msa1134000:CDS | 25.0% |
| !!! | TCTTTTTCTTTTAGGTGATT+TGG | + | chr7_4:366322-366341 | Msa1134000:intron | 25.0% |
| !! | TCTTTTTGCAGAATGAAAAT+TGG | + | chr7_4:366680-366699 | Msa1134000:intron | 25.0% |
| !! | CTTTTTGCAGAATGAAAATT+GGG | + | chr7_4:366681-366700 | Msa1134000:intron | 25.0% |
| ! | TTAAGCATTATTTCCAAAAG+AGG | - | chr7_4:366977-366996 | None:intergenic | 25.0% |
| ! | AGACCTAATAATAAAAGGAA+GGG | - | chr7_4:367015-367034 | None:intergenic | 25.0% |
| ! | TAGACAGACCTAATAATAAA+AGG | - | chr7_4:367020-367039 | None:intergenic | 25.0% |
| !!! | CATTTTTCAATAAATCACGA+TGG | - | chr7_4:367279-367298 | None:intergenic | 25.0% |
| GAAAAGAAAGGAAAGGAAAA+GGG | - | chr7_4:365748-365767 | None:intergenic | 30.0% | |
| AGAAAAGAAAGGAAAGGAAA+AGG | - | chr7_4:365749-365768 | None:intergenic | 30.0% | |
| AGAATAAAGAAAGGTGAAGA+AGG | - | chr7_4:365821-365840 | None:intergenic | 30.0% | |
| CCATTAAAAAGTTGTAGCAA+AGG | - | chr7_4:365871-365890 | None:intergenic | 30.0% | |
| ! | CCTTTGCTACAACTTTTTAA+TGG | + | chr7_4:365868-365887 | Msa1134000:five_prime_UTR | 30.0% |
| !!! | AAAACTCTTGTTTTCTACAG+AGG | + | chr7_4:366494-366513 | Msa1134000:CDS | 30.0% |
| ! | CTCAAATTCAAGTTCAAAAG+TGG | + | chr7_4:366816-366835 | Msa1134000:CDS | 30.0% |
| ! | AAATTCAAGTTCAAAAGTGG+TGG | + | chr7_4:366819-366838 | Msa1134000:CDS | 30.0% |
| ATTATTTCCAAAAGAGGATG+AGG | - | chr7_4:366971-366990 | None:intergenic | 30.0% | |
| TAATAATAAAAGGAAGGGGA+GGG | - | chr7_4:367010-367029 | None:intergenic | 30.0% | |
| GACCTAATAATAAAAGGAAG+GGG | - | chr7_4:367014-367033 | None:intergenic | 30.0% | |
| CAGACCTAATAATAAAAGGA+AGG | - | chr7_4:367016-367035 | None:intergenic | 30.0% | |
| TACAGAATCTCTTAAAAGGA+GGG | - | chr7_4:367212-367231 | None:intergenic | 30.0% | |
| TTACAGAATCTCTTAAAAGG+AGG | - | chr7_4:367213-367232 | None:intergenic | 30.0% | |
| CACTTACAGAATCTCTTAAA+AGG | - | chr7_4:367216-367235 | None:intergenic | 30.0% | |
| GAAAAGAAAGGAAAGGAAAA+GGG | - | chr7_4:365748-365767 | None:intergenic | 30.0% | |
| AGAAAAGAAAGGAAAGGAAA+AGG | - | chr7_4:365749-365768 | None:intergenic | 30.0% | |
| AGAATAAAGAAAGGTGAAGA+AGG | - | chr7_4:365821-365840 | None:intergenic | 30.0% | |
| CCATTAAAAAGTTGTAGCAA+AGG | - | chr7_4:365871-365890 | None:intergenic | 30.0% | |
| ! | CCTTTGCTACAACTTTTTAA+TGG | + | chr7_4:365868-365887 | Msa1134000:five_prime_UTR | 30.0% |
| !!! | AAAACTCTTGTTTTCTACAG+AGG | + | chr7_4:366494-366513 | Msa1134000:CDS | 30.0% |
| ! | CTCAAATTCAAGTTCAAAAG+TGG | + | chr7_4:366816-366835 | Msa1134000:CDS | 30.0% |
| ! | AAATTCAAGTTCAAAAGTGG+TGG | + | chr7_4:366819-366838 | Msa1134000:CDS | 30.0% |
| ATTATTTCCAAAAGAGGATG+AGG | - | chr7_4:366971-366990 | None:intergenic | 30.0% | |
| TAATAATAAAAGGAAGGGGA+GGG | - | chr7_4:367010-367029 | None:intergenic | 30.0% | |
| GACCTAATAATAAAAGGAAG+GGG | - | chr7_4:367014-367033 | None:intergenic | 30.0% | |
| CAGACCTAATAATAAAAGGA+AGG | - | chr7_4:367016-367035 | None:intergenic | 30.0% | |
| TACAGAATCTCTTAAAAGGA+GGG | - | chr7_4:367212-367231 | None:intergenic | 30.0% | |
| TTACAGAATCTCTTAAAAGG+AGG | - | chr7_4:367213-367232 | None:intergenic | 30.0% | |
| CACTTACAGAATCTCTTAAA+AGG | - | chr7_4:367216-367235 | None:intergenic | 30.0% | |
| TGAAAGTGAAAAGAGAGAGA+AGG | + | chr7_4:365596-365615 | Msa1134000:five_prime_UTR | 35.0% | |
| GAAAGTGAAAAGAGAGAGAA+GGG | + | chr7_4:365597-365616 | Msa1134000:five_prime_UTR | 35.0% | |
| ACAACAAGTTCTTCATCAGT+TGG | - | chr7_4:366054-366073 | None:intergenic | 35.0% | |
| TGTTCAATACTTGAAGCGTA+AGG | + | chr7_4:366071-366090 | Msa1134000:CDS | 35.0% | |
| AAGATCAACTTCAGGAATGA+TGG | - | chr7_4:366121-366140 | None:intergenic | 35.0% | |
| ! | GAAAAGAAAAGGTACATACC+AGG | - | chr7_4:366168-366187 | None:intergenic | 35.0% |
| TAGTACAAGTCATCATGTTC+CGG | - | chr7_4:366267-366286 | None:intergenic | 35.0% | |
| AAAGAAGCCAAATACCCAAA+TGG | + | chr7_4:366371-366390 | Msa1134000:CDS | 35.0% | |
| AAGAAGCCAAATACCCAAAT+GGG | + | chr7_4:366372-366391 | Msa1134000:CDS | 35.0% | |
| ! | AGTTTGTAGCTCTGTTAGAT+CGG | - | chr7_4:366400-366419 | None:intergenic | 35.0% |
| TCAAAGAGTCATGAAGTTGT+TGG | + | chr7_4:366464-366483 | Msa1134000:CDS | 35.0% | |
| AAGAAAGAAAGACTGACCAA+GGG | - | chr7_4:366590-366609 | None:intergenic | 35.0% | |
| AAAGAAAGAAAGACTGACCA+AGG | - | chr7_4:366591-366610 | None:intergenic | 35.0% | |
| ! | TTTGTCGCATATTTCTGAAG+AGG | + | chr7_4:366707-366726 | Msa1134000:CDS | 35.0% |
| ! | GGTGGTTTTCTATGATTTCT+TGG | + | chr7_4:366837-366856 | Msa1134000:CDS | 35.0% |
| TTTCTATGATTTCTTGGCAC+AGG | + | chr7_4:366843-366862 | Msa1134000:CDS | 35.0% | |
| CAGTGGAATCACAAATGAAT+TGG | + | chr7_4:366906-366925 | Msa1134000:CDS | 35.0% | |
| CTAATAATAAAAGGAAGGGG+AGG | - | chr7_4:367011-367030 | None:intergenic | 35.0% | |
| ! | CTCCCCTTCCTTTTATTATT+AGG | + | chr7_4:367009-367028 | Msa1134000:three_prime_UTR | 35.0% |
| ! | ATCTGAAATGTCCCAAAATG+AGG | + | chr7_4:367066-367085 | Msa1134000:three_prime_UTR | 35.0% |
| ACAGAATCTCTTAAAAGGAG+GGG | - | chr7_4:367211-367230 | None:intergenic | 35.0% | |
| GTGTATGTTTGATATCACTG+TGG | + | chr7_4:367233-367252 | Msa1134000:three_prime_UTR | 35.0% | |
| TGAAAGTGAAAAGAGAGAGA+AGG | + | chr7_4:365596-365615 | Msa1134000:five_prime_UTR | 35.0% | |
| GAAAGTGAAAAGAGAGAGAA+GGG | + | chr7_4:365597-365616 | Msa1134000:five_prime_UTR | 35.0% | |
| ACAACAAGTTCTTCATCAGT+TGG | - | chr7_4:366054-366073 | None:intergenic | 35.0% | |
| TGTTCAATACTTGAAGCGTA+AGG | + | chr7_4:366071-366090 | Msa1134000:CDS | 35.0% | |
| AAGATCAACTTCAGGAATGA+TGG | - | chr7_4:366121-366140 | None:intergenic | 35.0% | |
| ! | GAAAAGAAAAGGTACATACC+AGG | - | chr7_4:366168-366187 | None:intergenic | 35.0% |
| TAGTACAAGTCATCATGTTC+CGG | - | chr7_4:366267-366286 | None:intergenic | 35.0% | |
| AAAGAAGCCAAATACCCAAA+TGG | + | chr7_4:366371-366390 | Msa1134000:CDS | 35.0% | |
| AAGAAGCCAAATACCCAAAT+GGG | + | chr7_4:366372-366391 | Msa1134000:CDS | 35.0% | |
| ! | AGTTTGTAGCTCTGTTAGAT+CGG | - | chr7_4:366400-366419 | None:intergenic | 35.0% |
| TCAAAGAGTCATGAAGTTGT+TGG | + | chr7_4:366464-366483 | Msa1134000:CDS | 35.0% | |
| AAGAAAGAAAGACTGACCAA+GGG | - | chr7_4:366590-366609 | None:intergenic | 35.0% | |
| AAAGAAAGAAAGACTGACCA+AGG | - | chr7_4:366591-366610 | None:intergenic | 35.0% | |
| ! | TTTGTCGCATATTTCTGAAG+AGG | + | chr7_4:366707-366726 | Msa1134000:CDS | 35.0% |
| ! | GGTGGTTTTCTATGATTTCT+TGG | + | chr7_4:366837-366856 | Msa1134000:CDS | 35.0% |
| TTTCTATGATTTCTTGGCAC+AGG | + | chr7_4:366843-366862 | Msa1134000:CDS | 35.0% | |
| CAGTGGAATCACAAATGAAT+TGG | + | chr7_4:366906-366925 | Msa1134000:CDS | 35.0% | |
| CTAATAATAAAAGGAAGGGG+AGG | - | chr7_4:367011-367030 | None:intergenic | 35.0% | |
| ! | CTCCCCTTCCTTTTATTATT+AGG | + | chr7_4:367009-367028 | Msa1134000:three_prime_UTR | 35.0% |
| ! | ATCTGAAATGTCCCAAAATG+AGG | + | chr7_4:367066-367085 | Msa1134000:three_prime_UTR | 35.0% |
| ACAGAATCTCTTAAAAGGAG+GGG | - | chr7_4:367211-367230 | None:intergenic | 35.0% | |
| GTGTATGTTTGATATCACTG+TGG | + | chr7_4:367233-367252 | Msa1134000:three_prime_UTR | 35.0% | |
| !! | CGACATTTGTTTGAGTTGAG+TGG | - | chr7_4:365639-365658 | None:intergenic | 40.0% |
| GGTGAAGAAGGAAGAGAAAA+GGG | - | chr7_4:365809-365828 | None:intergenic | 40.0% | |
| AGGTGAAGAAGGAAGAGAAA+AGG | - | chr7_4:365810-365829 | None:intergenic | 40.0% | |
| CTTCATCAGTTGGATGGAAA+CGG | - | chr7_4:366044-366063 | None:intergenic | 40.0% | |
| CAAGTTCTTCATCAGTTGGA+TGG | - | chr7_4:366050-366069 | None:intergenic | 40.0% | |
| ! | GAATGATGGAAGCAGGTAAA+GGG | - | chr7_4:366107-366126 | None:intergenic | 40.0% |
| GACTTGCAAAGATCAACTTC+AGG | - | chr7_4:366129-366148 | None:intergenic | 40.0% | |
| ATCTTTGCAAGTCTGATCCT+TGG | + | chr7_4:366136-366155 | Msa1134000:CDS | 40.0% | |
| TCTTTGCAAGTCTGATCCTT+GGG | + | chr7_4:366137-366156 | Msa1134000:CDS | 40.0% | |
| TACATACCAGGTAAATCCCA+AGG | - | chr7_4:366156-366175 | None:intergenic | 40.0% | |
| AGTACAAGTCATCATGTTCC+GGG | - | chr7_4:366266-366285 | None:intergenic | 40.0% | |
| CTACTGCAAACAATGTCATG+TGG | + | chr7_4:366293-366312 | Msa1134000:intron | 40.0% | |
| ! | TAGGTGATTTGGAACAAGAG+AGG | + | chr7_4:366333-366352 | Msa1134000:intron | 40.0% |
| ! | TGTTAGATCGGTTCCCATTT+GGG | - | chr7_4:366388-366407 | None:intergenic | 40.0% |
| TCTAACAGAGCTACAAACTC+TGG | + | chr7_4:366401-366420 | Msa1134000:CDS | 40.0% | |
| CAATCAGTTCTTGAACCATG+AGG | - | chr7_4:366527-366546 | None:intergenic | 40.0% | |
| CTCATGGTTCAAGAACTGAT+TGG | + | chr7_4:366525-366544 | Msa1134000:CDS | 40.0% | |
| AGAAAGAAAGACTGACCAAG+GGG | - | chr7_4:366589-366608 | None:intergenic | 40.0% | |
| ! | ATATTTCTGAAGAGGAGAGG+TGG | + | chr7_4:366715-366734 | Msa1134000:CDS | 40.0% |
| TTTCCAAAAGAGGATGAGGA+TGG | - | chr7_4:366967-366986 | None:intergenic | 40.0% | |
| GAAATGTCCCAAAATGAGGT+CGG | + | chr7_4:367070-367089 | Msa1134000:three_prime_UTR | 40.0% | |
| ! | CTTAATGCCGACCTCATTTT+GGG | - | chr7_4:367080-367099 | None:intergenic | 40.0% |
| ! | TCTTAATGCCGACCTCATTT+TGG | - | chr7_4:367081-367100 | None:intergenic | 40.0% |
| !! | CGACATTTGTTTGAGTTGAG+TGG | - | chr7_4:365639-365658 | None:intergenic | 40.0% |
| GGTGAAGAAGGAAGAGAAAA+GGG | - | chr7_4:365809-365828 | None:intergenic | 40.0% | |
| AGGTGAAGAAGGAAGAGAAA+AGG | - | chr7_4:365810-365829 | None:intergenic | 40.0% | |
| CTTCATCAGTTGGATGGAAA+CGG | - | chr7_4:366044-366063 | None:intergenic | 40.0% | |
| CAAGTTCTTCATCAGTTGGA+TGG | - | chr7_4:366050-366069 | None:intergenic | 40.0% | |
| ! | GAATGATGGAAGCAGGTAAA+GGG | - | chr7_4:366107-366126 | None:intergenic | 40.0% |
| GACTTGCAAAGATCAACTTC+AGG | - | chr7_4:366129-366148 | None:intergenic | 40.0% | |
| ATCTTTGCAAGTCTGATCCT+TGG | + | chr7_4:366136-366155 | Msa1134000:CDS | 40.0% | |
| TCTTTGCAAGTCTGATCCTT+GGG | + | chr7_4:366137-366156 | Msa1134000:CDS | 40.0% | |
| TACATACCAGGTAAATCCCA+AGG | - | chr7_4:366156-366175 | None:intergenic | 40.0% | |
| AGTACAAGTCATCATGTTCC+GGG | - | chr7_4:366266-366285 | None:intergenic | 40.0% | |
| CTACTGCAAACAATGTCATG+TGG | + | chr7_4:366293-366312 | Msa1134000:intron | 40.0% | |
| ! | TAGGTGATTTGGAACAAGAG+AGG | + | chr7_4:366333-366352 | Msa1134000:intron | 40.0% |
| ! | TGTTAGATCGGTTCCCATTT+GGG | - | chr7_4:366388-366407 | None:intergenic | 40.0% |
| TCTAACAGAGCTACAAACTC+TGG | + | chr7_4:366401-366420 | Msa1134000:CDS | 40.0% | |
| CAATCAGTTCTTGAACCATG+AGG | - | chr7_4:366527-366546 | None:intergenic | 40.0% | |
| CTCATGGTTCAAGAACTGAT+TGG | + | chr7_4:366525-366544 | Msa1134000:CDS | 40.0% | |
| AGAAAGAAAGACTGACCAAG+GGG | - | chr7_4:366589-366608 | None:intergenic | 40.0% | |
| ! | ATATTTCTGAAGAGGAGAGG+TGG | + | chr7_4:366715-366734 | Msa1134000:CDS | 40.0% |
| TTTCCAAAAGAGGATGAGGA+TGG | - | chr7_4:366967-366986 | None:intergenic | 40.0% | |
| GAAATGTCCCAAAATGAGGT+CGG | + | chr7_4:367070-367089 | Msa1134000:three_prime_UTR | 40.0% | |
| ! | CTTAATGCCGACCTCATTTT+GGG | - | chr7_4:367080-367099 | None:intergenic | 40.0% |
| ! | TCTTAATGCCGACCTCATTT+TGG | - | chr7_4:367081-367100 | None:intergenic | 40.0% |
| ATGGGTCAATGAGTCTGACA+AGG | - | chr7_4:365684-365703 | None:intergenic | 45.0% | |
| GAAAGGAAAGGAAAAGGGCA+TGG | - | chr7_4:365743-365762 | None:intergenic | 45.0% | |
| ! | GAACTTGTTTACCACACGAG+TGG | + | chr7_4:365911-365930 | Msa1134000:five_prime_UTR | 45.0% |
| AAATGTCAAAGCCACTCGTG+TGG | - | chr7_4:365925-365944 | None:intergenic | 45.0% | |
| ! | GGAATGATGGAAGCAGGTAA+AGG | - | chr7_4:366108-366127 | None:intergenic | 45.0% |
| ! | ACTTCAGGAATGATGGAAGC+AGG | - | chr7_4:366114-366133 | None:intergenic | 45.0% |
| TCTGATCCTTGGGATTTACC+TGG | + | chr7_4:366147-366166 | Msa1134000:CDS | 45.0% | |
| CGAAGCACAGACACAGATAT+CGG | + | chr7_4:366210-366229 | Msa1134000:intron | 45.0% | |
| CACAGATATCGGACACAACA+TGG | + | chr7_4:366221-366240 | Msa1134000:intron | 45.0% | |
| TCGGTTCCCATTTGGGTATT+TGG | - | chr7_4:366381-366400 | None:intergenic | 45.0% | |
| ! | CTGTTAGATCGGTTCCCATT+TGG | - | chr7_4:366389-366408 | None:intergenic | 45.0% |
| GAGCTACAAACTCTGGTTAC+TGG | + | chr7_4:366408-366427 | Msa1134000:CDS | 45.0% | |
| TCTGGTTACTGGAAAGCAAC+TGG | + | chr7_4:366419-366438 | Msa1134000:CDS | 45.0% | |
| TCAGTTCTTGAACCATGAGG+TGG | - | chr7_4:366524-366543 | None:intergenic | 45.0% | |
| ! | CGCATATTTCTGAAGAGGAG+AGG | + | chr7_4:366712-366731 | Msa1134000:CDS | 45.0% |
| ! | AGGAGAGGTGGTGCTAAAAA+TGG | + | chr7_4:366727-366746 | Msa1134000:CDS | 45.0% |
| ! | AGGTGGTGCTAAAAATGGAG+AGG | + | chr7_4:366732-366751 | Msa1134000:CDS | 45.0% |
| TTTGTGATTCCACTGCTAGC+TGG | - | chr7_4:366901-366920 | None:intergenic | 45.0% | |
| ! | CTTCCATCCTCATCCTCTTT+TGG | + | chr7_4:366961-366980 | Msa1134000:CDS | 45.0% |
| AATAAAAGGAAGGGGAGGGA+GGG | - | chr7_4:367006-367025 | None:intergenic | 45.0% | |
| TAATAAAAGGAAGGGGAGGG+AGG | - | chr7_4:367007-367026 | None:intergenic | 45.0% | |
| ACTGTGGTGTGTCACAATCA+TGG | + | chr7_4:367249-367268 | Msa1134000:three_prime_UTR | 45.0% | |
| ATGGGTCAATGAGTCTGACA+AGG | - | chr7_4:365684-365703 | None:intergenic | 45.0% | |
| GAAAGGAAAGGAAAAGGGCA+TGG | - | chr7_4:365743-365762 | None:intergenic | 45.0% | |
| ! | GAACTTGTTTACCACACGAG+TGG | + | chr7_4:365911-365930 | Msa1134000:five_prime_UTR | 45.0% |
| AAATGTCAAAGCCACTCGTG+TGG | - | chr7_4:365925-365944 | None:intergenic | 45.0% | |
| ! | GGAATGATGGAAGCAGGTAA+AGG | - | chr7_4:366108-366127 | None:intergenic | 45.0% |
| ! | ACTTCAGGAATGATGGAAGC+AGG | - | chr7_4:366114-366133 | None:intergenic | 45.0% |
| TCTGATCCTTGGGATTTACC+TGG | + | chr7_4:366147-366166 | Msa1134000:CDS | 45.0% | |
| CGAAGCACAGACACAGATAT+CGG | + | chr7_4:366210-366229 | Msa1134000:intron | 45.0% | |
| CACAGATATCGGACACAACA+TGG | + | chr7_4:366221-366240 | Msa1134000:intron | 45.0% | |
| TCGGTTCCCATTTGGGTATT+TGG | - | chr7_4:366381-366400 | None:intergenic | 45.0% | |
| ! | CTGTTAGATCGGTTCCCATT+TGG | - | chr7_4:366389-366408 | None:intergenic | 45.0% |
| GAGCTACAAACTCTGGTTAC+TGG | + | chr7_4:366408-366427 | Msa1134000:CDS | 45.0% | |
| TCTGGTTACTGGAAAGCAAC+TGG | + | chr7_4:366419-366438 | Msa1134000:CDS | 45.0% | |
| TCAGTTCTTGAACCATGAGG+TGG | - | chr7_4:366524-366543 | None:intergenic | 45.0% | |
| ! | CGCATATTTCTGAAGAGGAG+AGG | + | chr7_4:366712-366731 | Msa1134000:CDS | 45.0% |
| ! | AGGAGAGGTGGTGCTAAAAA+TGG | + | chr7_4:366727-366746 | Msa1134000:CDS | 45.0% |
| ! | AGGTGGTGCTAAAAATGGAG+AGG | + | chr7_4:366732-366751 | Msa1134000:CDS | 45.0% |
| TTTGTGATTCCACTGCTAGC+TGG | - | chr7_4:366901-366920 | None:intergenic | 45.0% | |
| ! | CTTCCATCCTCATCCTCTTT+TGG | + | chr7_4:366961-366980 | Msa1134000:CDS | 45.0% |
| AATAAAAGGAAGGGGAGGGA+GGG | - | chr7_4:367006-367025 | None:intergenic | 45.0% | |
| TAATAAAAGGAAGGGGAGGG+AGG | - | chr7_4:367007-367026 | None:intergenic | 45.0% | |
| ACTGTGGTGTGTCACAATCA+TGG | + | chr7_4:367249-367268 | Msa1134000:three_prime_UTR | 45.0% | |
| GTTGGATGGAAACGGAAACC+TGG | - | chr7_4:366036-366055 | None:intergenic | 50.0% | |
| TACAGAGGCAAACCACCTCA+TGG | + | chr7_4:366509-366528 | Msa1134000:CDS | 50.0% | |
| AGAAAGACTGACCAAGGGGT+TGG | - | chr7_4:366585-366604 | None:intergenic | 50.0% | |
| CCAAAGTTGCTGCAACTGCT+TGG | - | chr7_4:366769-366788 | None:intergenic | 50.0% | |
| CCAAGCAGTTGCAGCAACTT+TGG | + | chr7_4:366766-366785 | Msa1134000:CDS | 50.0% | |
| CAGTTGCAGCAACTTTGGTG+AGG | + | chr7_4:366771-366790 | Msa1134000:CDS | 50.0% | |
| ATAAAAGGAAGGGGAGGGAG+GGG | - | chr7_4:367005-367024 | None:intergenic | 50.0% | |
| GTTGGATGGAAACGGAAACC+TGG | - | chr7_4:366036-366055 | None:intergenic | 50.0% | |
| TACAGAGGCAAACCACCTCA+TGG | + | chr7_4:366509-366528 | Msa1134000:CDS | 50.0% | |
| AGAAAGACTGACCAAGGGGT+TGG | - | chr7_4:366585-366604 | None:intergenic | 50.0% | |
| CCAAAGTTGCTGCAACTGCT+TGG | - | chr7_4:366769-366788 | None:intergenic | 50.0% | |
| CCAAGCAGTTGCAGCAACTT+TGG | + | chr7_4:366766-366785 | Msa1134000:CDS | 50.0% | |
| CAGTTGCAGCAACTTTGGTG+AGG | + | chr7_4:366771-366790 | Msa1134000:CDS | 50.0% | |
| ATAAAAGGAAGGGGAGGGAG+GGG | - | chr7_4:367005-367024 | None:intergenic | 50.0% | |
| GGTGAAGTGAGATTGCCACC+AGG | + | chr7_4:366015-366034 | Msa1134000:CDS | 55.0% | |
| GGATGGAAACGGAAACCTGG+TGG | - | chr7_4:366033-366052 | None:intergenic | 55.0% | |
| CACTGACACGTTCAGACACC+CGG | + | chr7_4:366245-366264 | Msa1134000:intron | 55.0% | |
| GGTTGGAGTGAGAGGAAGTG+AGG | - | chr7_4:366568-366587 | None:intergenic | 55.0% | |
| TTCCTCTCACTCCAACCCCT+TGG | + | chr7_4:366571-366590 | Msa1134000:CDS | 55.0% | |
| GATTCCACTGCTAGCTGGTG+AGG | - | chr7_4:366896-366915 | None:intergenic | 55.0% | |
| TAAAAGGAAGGGGAGGGAGG+GGG | - | chr7_4:367004-367023 | None:intergenic | 55.0% | |
| GGTGAAGTGAGATTGCCACC+AGG | + | chr7_4:366015-366034 | Msa1134000:CDS | 55.0% | |
| GGATGGAAACGGAAACCTGG+TGG | - | chr7_4:366033-366052 | None:intergenic | 55.0% | |
| CACTGACACGTTCAGACACC+CGG | + | chr7_4:366245-366264 | Msa1134000:intron | 55.0% | |
| GGTTGGAGTGAGAGGAAGTG+AGG | - | chr7_4:366568-366587 | None:intergenic | 55.0% | |
| TTCCTCTCACTCCAACCCCT+TGG | + | chr7_4:366571-366590 | Msa1134000:CDS | 55.0% | |
| GATTCCACTGCTAGCTGGTG+AGG | - | chr7_4:366896-366915 | None:intergenic | 55.0% | |
| TAAAAGGAAGGGGAGGGAGG+GGG | - | chr7_4:367004-367023 | None:intergenic | 55.0% | |
| GACCAAGGGGTTGGAGTGAG+AGG | - | chr7_4:366576-366595 | None:intergenic | 60.0% | |
| ACTGCTAGCTGGTGAGGAGG+AGG | - | chr7_4:366890-366909 | None:intergenic | 60.0% | |
| TCCTCCTCACCAGCTAGCAG+TGG | + | chr7_4:366889-366908 | Msa1134000:CDS | 60.0% | |
| TCCACTGCTAGCTGGTGAGG+AGG | - | chr7_4:366893-366912 | None:intergenic | 60.0% | |
| GACCAAGGGGTTGGAGTGAG+AGG | - | chr7_4:366576-366595 | None:intergenic | 60.0% | |
| ACTGCTAGCTGGTGAGGAGG+AGG | - | chr7_4:366890-366909 | None:intergenic | 60.0% | |
| TCCTCCTCACCAGCTAGCAG+TGG | + | chr7_4:366889-366908 | Msa1134000:CDS | 60.0% | |
| TCCACTGCTAGCTGGTGAGG+AGG | - | chr7_4:366893-366912 | None:intergenic | 60.0% | |
| AAGGAAGGGGAGGGAGGGGG+TGG | - | chr7_4:367001-367020 | None:intergenic | 70.0% | |
| AAGGAAGGGGAGGGAGGGGG+TGG | - | chr7_4:367001-367020 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 365592 | 367347 | 365592 | ID=Msa1134000;Name=Msa1134000 |
| chr7_4 | mRNA | 365592 | 367347 | 365592 | ID=Msa1134000-mRNA-1;Parent=Msa1134000;Name=Msa1134000-mRNA-1;_AED=0.04;_eAED=0.04;_QI=393|1|1|1|1|1|3|351|248 |
| chr7_4 | exon | 365592 | 366168 | 365592 | ID=Msa1134000-mRNA-1:exon:102;Parent=Msa1134000-mRNA-1 |
| chr7_4 | exon | 366336 | 366592 | 366336 | ID=Msa1134000-mRNA-1:exon:103;Parent=Msa1134000-mRNA-1 |
| chr7_4 | exon | 366691 | 367347 | 366691 | ID=Msa1134000-mRNA-1:exon:104;Parent=Msa1134000-mRNA-1 |
| chr7_4 | five_prime_UTR | 365592 | 365984 | 365592 | ID=Msa1134000-mRNA-1:five_prime_utr;Parent=Msa1134000-mRNA-1 |
| chr7_4 | CDS | 365985 | 366168 | 365985 | ID=Msa1134000-mRNA-1:cds;Parent=Msa1134000-mRNA-1 |
| chr7_4 | CDS | 366336 | 366592 | 366336 | ID=Msa1134000-mRNA-1:cds;Parent=Msa1134000-mRNA-1 |
| chr7_4 | CDS | 366691 | 366996 | 366691 | ID=Msa1134000-mRNA-1:cds;Parent=Msa1134000-mRNA-1 |
| chr7_4 | three_prime_UTR | 366997 | 367347 | 366997 | ID=Msa1134000-mRNA-1:three_prime_utr;Parent=Msa1134000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
