Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1141120 | AES78253.1 | 87.119 | 590 | 61 | 2 | 44 | 619 | 14 | 602 | 0.0 | 983 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1141120 | sp|Q9ZWJ9|ARR2_ARATH | 36.032 | 247 | 136 | 3 | 19 | 243 | 26 | 272 | 9.87e-45 | 172 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1141120 | G7L033 | 87.119 | 590 | 61 | 2 | 44 | 619 | 14 | 602 | 0.0 | 983 |
Gene ID | Type | Classification |
---|---|---|
Msa1141120 | TR | Others |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1141120 | MtrunA17_Chr7g0223971 | 82.081 | 519 | 45 | 3 | 99 | 570 | 1 | 518 | 0.0 | 791 |
Msa1141120 | MtrunA17_Chr6g0473731 | 44.828 | 435 | 161 | 12 | 97 | 503 | 10 | 393 | 3.04e-95 | 299 |
Msa1141120 | MtrunA17_Chr7g0223991 | 71.628 | 215 | 40 | 4 | 254 | 466 | 24 | 219 | 2.20e-91 | 281 |
Msa1141120 | MtrunA17_Chr2g0294911 | 38.235 | 238 | 135 | 4 | 21 | 246 | 33 | 270 | 1.78e-43 | 164 |
Msa1141120 | MtrunA17_Chr4g0067981 | 35.124 | 242 | 139 | 2 | 21 | 246 | 35 | 274 | 2.12e-42 | 162 |
Msa1141120 | MtrunA17_Chr3g0123131 | 35.227 | 264 | 145 | 5 | 21 | 261 | 17 | 277 | 1.89e-41 | 158 |
Msa1141120 | MtrunA17_Chr1g0161431 | 36.364 | 242 | 135 | 5 | 21 | 243 | 15 | 256 | 4.13e-41 | 158 |
Msa1141120 | MtrunA17_Chr1g0149841 | 35.124 | 242 | 141 | 2 | 21 | 246 | 9 | 250 | 1.56e-40 | 154 |
Msa1141120 | MtrunA17_Chr8g0376881 | 34.586 | 266 | 156 | 5 | 14 | 261 | 22 | 287 | 1.68e-40 | 155 |
Msa1141120 | MtrunA17_Chr6g0471041 | 35.808 | 229 | 133 | 2 | 22 | 249 | 19 | 234 | 9.17e-40 | 150 |
Msa1141120 | MtrunA17_Chr3g0137101 | 36.290 | 248 | 134 | 4 | 21 | 246 | 12 | 257 | 2.30e-39 | 153 |
Msa1141120 | MtrunA17_Chr4g0009851 | 32.087 | 321 | 177 | 10 | 21 | 327 | 15 | 308 | 1.28e-38 | 144 |
Msa1141120 | MtrunA17_Chr4g0009901 | 35.169 | 236 | 133 | 4 | 21 | 252 | 14 | 233 | 2.00e-38 | 143 |
Msa1141120 | MtrunA17_Chr7g0275401 | 34.728 | 239 | 137 | 3 | 23 | 243 | 11 | 248 | 1.15e-36 | 139 |
Msa1141120 | MtrunA17_Chr7g0275891 | 32.157 | 255 | 144 | 4 | 21 | 246 | 9 | 263 | 1.92e-35 | 137 |
Msa1141120 | MtrunA17_Chr4g0074411 | 32.377 | 244 | 152 | 2 | 21 | 251 | 22 | 265 | 1.78e-34 | 138 |
Msa1141120 | MtrunA17_Chr4g0009981 | 30.545 | 275 | 161 | 7 | 62 | 327 | 2 | 255 | 2.29e-34 | 131 |
Msa1141120 | MtrunA17_Chr2g0304841 | 31.095 | 283 | 162 | 5 | 3 | 254 | 2 | 282 | 2.40e-34 | 139 |
Msa1141120 | MtrunA17_Chr4g0074401 | 32.932 | 249 | 151 | 3 | 21 | 253 | 21 | 269 | 3.16e-32 | 131 |
Msa1141120 | MtrunA17_Chr1g0149851 | 32.103 | 271 | 139 | 4 | 21 | 253 | 9 | 272 | 3.51e-32 | 131 |
Msa1141120 | MtrunA17_Chr3g0134481 | 33.028 | 218 | 100 | 2 | 21 | 238 | 12 | 183 | 5.73e-31 | 119 |
Msa1141120 | MtrunA17_Chr3g0134461 | 35.023 | 217 | 104 | 3 | 21 | 236 | 12 | 192 | 1.05e-30 | 119 |
Msa1141120 | MtrunA17_Chr4g0074421 | 35.979 | 189 | 106 | 4 | 66 | 241 | 1 | 187 | 9.10e-25 | 102 |
Msa1141120 | MtrunA17_Chr1g0149831 | 32.812 | 192 | 93 | 5 | 78 | 246 | 6 | 184 | 1.36e-22 | 97.1 |
Msa1141120 | MtrunA17_Chr8g0391911 | 27.413 | 259 | 150 | 6 | 19 | 251 | 11 | 257 | 9.61e-19 | 86.3 |
Msa1141120 | MtrunA17_Chr4g0031961 | 44.792 | 96 | 43 | 3 | 180 | 271 | 124 | 213 | 2.34e-18 | 86.3 |
Msa1141120 | MtrunA17_Chr7g0255711 | 51.515 | 66 | 32 | 0 | 178 | 243 | 82 | 147 | 1.19e-17 | 84.0 |
Msa1141120 | MtrunA17_Chr4g0009991 | 36.434 | 129 | 66 | 2 | 110 | 236 | 2 | 116 | 1.77e-17 | 79.0 |
Msa1141120 | MtrunA17_Chr4g0011071 | 29.139 | 151 | 88 | 3 | 67 | 213 | 39 | 174 | 2.76e-16 | 77.4 |
Msa1141120 | MtrunA17_Chr8g0383961 | 29.596 | 223 | 120 | 7 | 21 | 243 | 18 | 203 | 1.36e-15 | 77.4 |
Msa1141120 | MtrunA17_Chr2g0324891 | 44.444 | 90 | 49 | 1 | 150 | 239 | 125 | 213 | 3.82e-15 | 78.2 |
Msa1141120 | MtrunA17_Chr4g0040481 | 61.111 | 54 | 21 | 0 | 186 | 239 | 157 | 210 | 7.40e-15 | 77.0 |
Msa1141120 | MtrunA17_Chr4g0054981 | 50.794 | 63 | 31 | 0 | 186 | 248 | 309 | 371 | 5.89e-14 | 75.1 |
Msa1141120 | MtrunA17_Chr5g0400241 | 53.333 | 60 | 28 | 0 | 186 | 245 | 310 | 369 | 8.51e-14 | 74.3 |
Msa1141120 | MtrunA17_Chr4g0061021 | 27.273 | 154 | 109 | 1 | 19 | 169 | 31 | 184 | 1.93e-12 | 70.1 |
Msa1141120 | MtrunA17_Chr3g0091641 | 34.862 | 109 | 68 | 1 | 19 | 124 | 22 | 130 | 2.00e-12 | 70.1 |
Msa1141120 | MtrunA17_Chr6g0469321 | 61.364 | 44 | 17 | 0 | 203 | 246 | 70 | 113 | 4.68e-12 | 65.1 |
Msa1141120 | MtrunA17_Chr5g0417521 | 54.545 | 55 | 24 | 1 | 187 | 240 | 15 | 69 | 1.19e-11 | 66.6 |
Msa1141120 | MtrunA17_Chr6g0461641 | 54.545 | 55 | 24 | 1 | 187 | 240 | 42 | 96 | 1.46e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1141120 | AT5G07210.2 | 35.959 | 292 | 135 | 7 | 18 | 263 | 13 | 298 | 5.09e-44 | 167 |
Msa1141120 | AT3G16857.1 | 35.135 | 259 | 134 | 3 | 19 | 243 | 35 | 293 | 8.72e-44 | 167 |
Msa1141120 | AT3G16857.2 | 35.135 | 259 | 134 | 3 | 19 | 243 | 35 | 293 | 1.32e-43 | 166 |
Msa1141120 | AT5G07210.1 | 35.000 | 300 | 135 | 8 | 18 | 263 | 13 | 306 | 2.40e-41 | 159 |
Msa1141120 | AT2G01760.1 | 35.060 | 251 | 140 | 4 | 19 | 246 | 9 | 259 | 5.24e-39 | 148 |
Msa1141120 | AT2G25180.1 | 35.294 | 238 | 142 | 2 | 21 | 246 | 17 | 254 | 4.81e-38 | 149 |
Msa1141120 | AT3G16857.3 | 35.586 | 222 | 109 | 3 | 56 | 243 | 2 | 223 | 3.14e-37 | 147 |
Msa1141120 | AT4G31920.1 | 35.345 | 232 | 146 | 2 | 21 | 250 | 17 | 246 | 4.74e-37 | 145 |
Msa1141120 | AT2G27070.1 | 30.841 | 321 | 167 | 9 | 18 | 293 | 13 | 323 | 2.47e-36 | 144 |
Msa1141120 | AT1G67710.1 | 35.772 | 246 | 140 | 5 | 21 | 249 | 11 | 255 | 1.12e-34 | 138 |
Msa1141120 | AT2G01760.2 | 34.959 | 246 | 133 | 6 | 24 | 246 | 46 | 287 | 1.87e-33 | 133 |
Msa1141120 | AT5G49240.1 | 31.915 | 235 | 137 | 3 | 21 | 236 | 42 | 272 | 4.40e-32 | 126 |
Msa1141120 | AT5G58080.1 | 30.168 | 358 | 194 | 10 | 9 | 323 | 6 | 350 | 1.63e-31 | 130 |
Msa1141120 | AT2G01760.3 | 34.536 | 194 | 104 | 4 | 76 | 246 | 1 | 194 | 6.12e-26 | 109 |
Msa1141120 | AT3G62670.1 | 31.878 | 229 | 143 | 6 | 22 | 239 | 42 | 268 | 1.62e-24 | 107 |
Msa1141120 | AT1G49190.1 | 31.148 | 244 | 143 | 5 | 23 | 244 | 36 | 276 | 2.52e-23 | 103 |
Msa1141120 | AT1G67710.2 | 36.170 | 188 | 102 | 5 | 79 | 249 | 4 | 190 | 1.89e-22 | 101 |
Msa1141120 | AT1G67710.3 | 36.842 | 171 | 90 | 5 | 96 | 249 | 12 | 181 | 1.26e-18 | 89.4 |
Msa1141120 | AT5G05090.1 | 31.720 | 186 | 115 | 4 | 175 | 353 | 69 | 249 | 1.88e-18 | 86.3 |
Msa1141120 | AT5G59570.2 | 38.393 | 112 | 58 | 2 | 145 | 245 | 88 | 199 | 2.17e-18 | 86.7 |
Msa1141120 | AT5G59570.1 | 38.393 | 112 | 58 | 2 | 145 | 245 | 88 | 199 | 2.17e-18 | 86.7 |
Msa1141120 | AT2G40970.1 | 53.030 | 66 | 31 | 0 | 178 | 243 | 96 | 161 | 8.28e-18 | 84.0 |
Msa1141120 | AT3G10760.1 | 49.296 | 71 | 36 | 0 | 173 | 243 | 91 | 161 | 9.16e-18 | 85.5 |
Msa1141120 | AT3G46640.2 | 51.471 | 68 | 31 | 1 | 178 | 243 | 133 | 200 | 9.94e-18 | 85.1 |
Msa1141120 | AT3G46640.1 | 51.471 | 68 | 31 | 1 | 178 | 243 | 133 | 200 | 9.94e-18 | 85.1 |
Msa1141120 | AT3G46640.3 | 54.098 | 61 | 28 | 0 | 183 | 243 | 140 | 200 | 1.77e-17 | 84.3 |
Msa1141120 | AT5G44190.1 | 62.500 | 56 | 21 | 0 | 184 | 239 | 144 | 199 | 3.12e-16 | 81.6 |
Msa1141120 | AT5G44190.2 | 62.500 | 56 | 21 | 0 | 184 | 239 | 144 | 199 | 3.25e-16 | 80.9 |
Msa1141120 | AT2G20570.1 | 48.000 | 75 | 39 | 0 | 165 | 239 | 131 | 205 | 4.48e-14 | 75.1 |
Msa1141120 | AT2G20570.2 | 60.784 | 51 | 20 | 0 | 189 | 239 | 171 | 221 | 2.27e-13 | 73.2 |
Msa1141120 | AT4G18020.8 | 32.624 | 141 | 76 | 3 | 127 | 248 | 217 | 357 | 2.58e-13 | 73.2 |
Msa1141120 | AT4G18020.11 | 32.624 | 141 | 76 | 3 | 127 | 248 | 217 | 357 | 2.58e-13 | 73.2 |
Msa1141120 | AT4G18020.4 | 32.624 | 141 | 76 | 3 | 127 | 248 | 217 | 357 | 2.58e-13 | 73.2 |
Msa1141120 | AT4G18020.5 | 32.624 | 141 | 76 | 3 | 127 | 248 | 217 | 357 | 2.58e-13 | 73.2 |
Msa1141120 | AT4G18020.10 | 32.624 | 141 | 76 | 3 | 127 | 248 | 217 | 357 | 2.58e-13 | 73.2 |
Msa1141120 | AT4G18020.7 | 32.624 | 141 | 76 | 3 | 127 | 248 | 217 | 357 | 2.58e-13 | 73.2 |
Msa1141120 | AT4G18020.3 | 32.624 | 141 | 76 | 3 | 127 | 248 | 217 | 357 | 3.27e-13 | 72.8 |
Msa1141120 | AT4G18020.2 | 32.624 | 141 | 76 | 3 | 127 | 248 | 217 | 357 | 3.27e-13 | 72.8 |
Msa1141120 | AT4G18020.1 | 32.624 | 141 | 76 | 3 | 127 | 248 | 217 | 357 | 3.27e-13 | 72.8 |
Msa1141120 | AT4G18020.6 | 32.624 | 141 | 76 | 3 | 127 | 248 | 217 | 357 | 3.27e-13 | 72.8 |
Msa1141120 | AT4G18020.9 | 32.624 | 141 | 76 | 3 | 127 | 248 | 217 | 357 | 3.27e-13 | 72.8 |
Msa1141120 | AT5G61380.1 | 27.778 | 126 | 88 | 1 | 19 | 141 | 17 | 142 | 9.80e-12 | 68.6 |
Msa1141120 | AT3G04450.3 | 36.190 | 105 | 54 | 3 | 137 | 239 | 198 | 291 | 1.13e-11 | 66.6 |
Msa1141120 | AT1G49190.2 | 29.661 | 118 | 83 | 0 | 23 | 140 | 36 | 153 | 2.60e-11 | 67.0 |
Msa1141120 | AT3G04450.1 | 52.632 | 57 | 26 | 1 | 184 | 239 | 235 | 291 | 2.62e-11 | 66.6 |
Msa1141120 | AT3G04450.4 | 52.632 | 57 | 26 | 1 | 184 | 239 | 195 | 251 | 2.79e-11 | 66.2 |
Msa1141120 | AT3G04450.2 | 52.632 | 57 | 26 | 1 | 184 | 239 | 195 | 251 | 2.79e-11 | 66.2 |
Msa1141120 | AT3G04030.1 | 52.727 | 55 | 25 | 1 | 187 | 240 | 45 | 99 | 4.87e-11 | 65.5 |
Msa1141120 | AT5G29000.4 | 50.877 | 57 | 27 | 1 | 184 | 239 | 228 | 284 | 4.88e-11 | 64.7 |
Msa1141120 | AT5G29000.1 | 50.877 | 57 | 27 | 1 | 184 | 239 | 185 | 241 | 4.96e-11 | 65.5 |
Msa1141120 | AT5G29000.3 | 50.877 | 57 | 27 | 1 | 184 | 239 | 185 | 241 | 4.96e-11 | 65.5 |
Msa1141120 | AT3G04030.3 | 52.727 | 55 | 25 | 1 | 187 | 240 | 45 | 99 | 5.38e-11 | 65.5 |
Find 111 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAACAATTCTGATTACTTAA+TGG | 0.142693 | 7_4:-14030063 | Msa1141120:CDS |
GGATTCTATTTCTGATATTA+TGG | 0.186158 | 7_4:-14030252 | Msa1141120:CDS |
GTAAGAAACAATAACCATTT+TGG | 0.206140 | 7_4:-14030410 | Msa1141120:CDS |
AAATTCTAACTTTGGATCTT+TGG | 0.211667 | 7_4:-14030471 | Msa1141120:CDS |
GCTGAAGACTTCAAAGATAT+TGG | 0.226006 | 7_4:-14032453 | Msa1141120:CDS |
GAACTATGAATAATGGATTA+AGG | 0.229051 | 7_4:-14030349 | Msa1141120:CDS |
CAATTCCCTTACATACAAAA+AGG | 0.230043 | 7_4:-14030770 | Msa1141120:CDS |
GGACCATGATGATGTTTATT+TGG | 0.237699 | 7_4:-14035535 | Msa1141120:CDS |
CCAATGGGGAACCATCTAAT+AGG | 0.237832 | 7_4:-14029437 | Msa1141120:CDS |
ACTTACTTTCCAATCCAATT+TGG | 0.246719 | 7_4:+14032214 | None:intergenic |
ATTGATATTTAATATGCTTT+TGG | 0.251059 | 7_4:+14033393 | None:intergenic |
CTGCTTGCTATTAACCAAAT+TGG | 0.262572 | 7_4:-14032228 | Msa1141120:CDS |
AACTTGTGAGGCATAATATT+AGG | 0.274422 | 7_4:+14030443 | None:intergenic |
AAATGTAGCAAGTCACTTAC+AGG | 0.277878 | 7_4:-14031205 | Msa1141120:intron |
AGGGTTGGCTCTTCAAGATT+TGG | 0.280377 | 7_4:-14030750 | Msa1141120:CDS |
GTGACACACTTACTTATTAT+AGG | 0.282733 | 7_4:+14033362 | None:intergenic |
CAAAGCATGACGAGCATCTT+TGG | 0.286240 | 7_4:+14033496 | None:intergenic |
CAACATGATGTGTTGGAAAT+TGG | 0.289454 | 7_4:+14030795 | None:intergenic |
ATCTCAAAGACGCTAGAAAA+TGG | 0.291584 | 7_4:-14032507 | Msa1141120:CDS |
TTTGGAATTCAGCTGAATAA+TGG | 0.297513 | 7_4:-14030392 | Msa1141120:CDS |
ACTTACTTATTATAGGTATC+TGG | 0.300133 | 7_4:+14033369 | None:intergenic |
ATTAATGCAGGAATTTGATA+TGG | 0.300210 | 7_4:-14029279 | Msa1141120:intron |
TATTCAGCTGAATTCCAAAA+TGG | 0.301790 | 7_4:+14030396 | None:intergenic |
TTAAGAAACAAAAGCTTGTT+TGG | 0.309580 | 7_4:-14032275 | Msa1141120:CDS |
GGAACCATCTAATAGGGTTT+TGG | 0.309810 | 7_4:-14029430 | Msa1141120:CDS |
GGAATTGGAACTATGAATAA+TGG | 0.315352 | 7_4:-14030356 | Msa1141120:CDS |
GATTCTATTTCTGATATTAT+GGG | 0.320241 | 7_4:-14030251 | Msa1141120:CDS |
TTGAAGTCTTCAGCACAAAA+AGG | 0.324880 | 7_4:+14032462 | None:intergenic |
TTCAAGATTTGGAACAAGTT+AGG | 0.332674 | 7_4:-14030739 | Msa1141120:CDS |
GCATTCTTTACTCTTTCTCT+TGG | 0.344272 | 7_4:+14032323 | None:intergenic |
TATACTCAACATAACTTAGA+TGG | 0.353303 | 7_4:-14030161 | Msa1141120:CDS |
CAATGGGGAACCATCTAATA+GGG | 0.355670 | 7_4:-14029436 | Msa1141120:CDS |
GGCTGTTCCAAAGAAAATTC+TGG | 0.359742 | 7_4:-14031259 | Msa1141120:CDS |
GATCTTGTTGAAGCCTTGTT+TGG | 0.371084 | 7_4:-14029257 | Msa1141120:CDS |
ACTTGTGAGGCATAATATTA+GGG | 0.374491 | 7_4:+14030444 | None:intergenic |
GGAGCAGAAATGGTTGGAAT+TGG | 0.379114 | 7_4:-14030371 | Msa1141120:CDS |
GGTTTGGTTCAAGGAGGGTT+TGG | 0.385385 | 7_4:-14030278 | Msa1141120:CDS |
CTGAAGACTTCAAAGATATT+GGG | 0.389220 | 7_4:-14032452 | Msa1141120:CDS |
TGCTATTAACCAAATTGGAT+TGG | 0.390260 | 7_4:-14032223 | Msa1141120:CDS |
CGTTATTGCAGAATTTCATC+TGG | 0.397811 | 7_4:-14033438 | Msa1141120:CDS |
CCTCCCAAAACCCTATTAGA+TGG | 0.398250 | 7_4:+14029426 | None:intergenic |
AACTATGAATAATGGATTAA+GGG | 0.410252 | 7_4:-14030348 | Msa1141120:CDS |
TAGAGGTGAACAAGGATTGA+TGG | 0.418771 | 7_4:-14030570 | Msa1141120:CDS |
GGCCATGATCAAAACAGGTT+TGG | 0.418831 | 7_4:-14030671 | Msa1141120:CDS |
CTGCGTGATGTTGCAGAGAA+AGG | 0.423104 | 7_4:-14030998 | Msa1141120:CDS |
GTGTTGGAAATTGGTTGAAA+TGG | 0.423793 | 7_4:+14030804 | None:intergenic |
AGATATTGGGAAATATGTTA+TGG | 0.426061 | 7_4:-14032439 | Msa1141120:CDS |
GCTGAATAATGGAGCAGAAA+TGG | 0.428747 | 7_4:-14030381 | Msa1141120:CDS |
CAGTGATGTCTGAAGACAAT+AGG | 0.437039 | 7_4:-14032539 | Msa1141120:CDS |
GGTTCAAGGAGGGTTTGGTC+TGG | 0.452214 | 7_4:-14030273 | Msa1141120:CDS |
ATAGTGGCCATGATCAAAAC+AGG | 0.454391 | 7_4:-14030676 | Msa1141120:CDS |
CAAAACAAGACAAGGGAAGA+TGG | 0.456559 | 7_4:-14035592 | Msa1141120:CDS |
AGCGTCTTTGAGATTAAACT+TGG | 0.469430 | 7_4:+14032516 | None:intergenic |
CTTCTTCAAGTTTCTTAACA+AGG | 0.470322 | 7_4:-14030538 | Msa1141120:CDS |
CTTGAATATCTCTCTGTCCT+TGG | 0.475871 | 7_4:+14032301 | None:intergenic |
GAGTCATTTGCTTGAAAACA+TGG | 0.478495 | 7_4:+14030629 | None:intergenic |
AACTTAGATGGAAATGTTGT+GGG | 0.487865 | 7_4:-14030149 | Msa1141120:CDS |
GCGGGATCAATTAATAATGA+AGG | 0.491320 | 7_4:-14030206 | Msa1141120:CDS |
ATGTAGTTGCGAGGAAATGA+AGG | 0.495618 | 7_4:-14029465 | Msa1141120:intron |
TAGTGCTACTTTCACTAATG+AGG | 0.497764 | 7_4:-14030108 | Msa1141120:CDS |
CCTATTAGATGGTTCCCCAT+TGG | 0.510141 | 7_4:+14029437 | None:intergenic |
TAACTTAGATGGAAATGTTG+TGG | 0.515281 | 7_4:-14030150 | Msa1141120:CDS |
TCTGATATTATGGGTGGGAG+TGG | 0.524002 | 7_4:-14030242 | Msa1141120:CDS |
GACATTAGAAACCAGAATCA+TGG | 0.525782 | 7_4:-14030500 | Msa1141120:CDS |
ATTTCTTGCTAATATACTCA+TGG | 0.525942 | 7_4:-14035511 | Msa1141120:CDS |
TAGGCATGGAAAATCAAAGT+TGG | 0.526672 | 7_4:-14030720 | Msa1141120:CDS |
AAAATCTTCATACCTCGTTA+CGG | 0.528212 | 7_4:+14030024 | None:intergenic |
ACTATTCTCCACAACAGCAT+TGG | 0.529555 | 7_4:+14030694 | None:intergenic |
TCTATTTCTGATATTATGGG+TGG | 0.531610 | 7_4:-14030248 | Msa1141120:CDS |
ATTGCAGAATTTCATCTGGT+GGG | 0.533922 | 7_4:-14033434 | Msa1141120:CDS |
TTCTTCAAGTTTCTTAACAA+GGG | 0.536372 | 7_4:-14030537 | Msa1141120:CDS |
ACCACTCTTCAAGAACATGA+AGG | 0.537021 | 7_4:-14033473 | Msa1141120:CDS |
GGCATGTCTCACAGAGCTCT+AGG | 0.548634 | 7_4:-14030965 | Msa1141120:CDS |
CTATTTCTGATATTATGGGT+GGG | 0.552442 | 7_4:-14030247 | Msa1141120:CDS |
TATTGCAGAATTTCATCTGG+TGG | 0.554479 | 7_4:-14033435 | Msa1141120:CDS |
AATAATGGAGCAGAAATGGT+TGG | 0.555811 | 7_4:-14030377 | Msa1141120:CDS |
CATTTGCTTGAAAACATGGA+AGG | 0.562150 | 7_4:+14030633 | None:intergenic |
AATTTGGTTTGGTTCAAGGA+GGG | 0.563542 | 7_4:-14030283 | Msa1141120:CDS |
TCTATATGATGAAAATCTAG+TGG | 0.565614 | 7_4:+14030589 | None:intergenic |
GTTTGCAAATATTGAAGTGT+TGG | 0.565873 | 7_4:+14030866 | None:intergenic |
ATGCCAAATAAACATCATCA+TGG | 0.567811 | 7_4:+14035532 | None:intergenic |
AATGCTGTTGTGGAGAATAG+TGG | 0.567974 | 7_4:-14030692 | Msa1141120:CDS |
ATTTCTCTGATCACAGAACT+CGG | 0.568518 | 7_4:+14030920 | None:intergenic |
GCCTTCATGTTCTTGAAGAG+TGG | 0.572193 | 7_4:+14033472 | None:intergenic |
GTTGCAGAGAAAGGAATGGT+TGG | 0.572817 | 7_4:-14030989 | Msa1141120:CDS |
GTTGGAAGCCAATGCTGTTG+TGG | 0.573882 | 7_4:-14030702 | Msa1141120:CDS |
GCAGAGAAAGGAATGGTTGG+AGG | 0.578705 | 7_4:-14030986 | Msa1141120:CDS |
ACTATGAATAATGGATTAAG+GGG | 0.581064 | 7_4:-14030347 | Msa1141120:CDS |
GATTTGGAACAAGTTAGGCA+TGG | 0.581107 | 7_4:-14030734 | Msa1141120:CDS |
GCAAATGACTCATTTGATGA+TGG | 0.582611 | 7_4:-14030617 | Msa1141120:CDS |
ACTTCAATATTTGCAAACAC+AGG | 0.588080 | 7_4:-14030861 | Msa1141120:CDS |
AAATTTGGTTTGGTTCAAGG+AGG | 0.591953 | 7_4:-14030284 | Msa1141120:CDS |
AGCATGACGAGCATCTTTGG+CGG | 0.594814 | 7_4:+14033499 | None:intergenic |
AATTGGTCAACATGATGTGT+TGG | 0.598362 | 7_4:+14030788 | None:intergenic |
TTGCTAATATACTCATGGCA+TGG | 0.599578 | 7_4:-14035506 | Msa1141120:CDS |
TCATCATATAGAGGTGAACA+AGG | 0.599585 | 7_4:-14030578 | Msa1141120:CDS |
ACTTACTAGATTAGTAGCTG+AGG | 0.606403 | 7_4:+14029383 | None:intergenic |
TTGGTACTATAGAAGACAAG+AGG | 0.611066 | 7_4:-14029238 | Msa1141120:CDS |
AGAAAGAGTAAAGAATGCCA+AGG | 0.613976 | 7_4:-14032318 | Msa1141120:CDS |
AGTGGAAGAGAGTTTCTAGC+GGG | 0.618710 | 7_4:-14030224 | Msa1141120:CDS |
TTATGTGATATGTAGTTGCG+AGG | 0.631887 | 7_4:-14029474 | Msa1141120:intron |
ACACAGGCATATCAAACAAG+AGG | 0.645847 | 7_4:-14030845 | Msa1141120:CDS |
TGGTACTATAGAAGACAAGA+GGG | 0.647456 | 7_4:-14029237 | Msa1141120:CDS |
CTCATGGCATGGCAATACAA+AGG | 0.648754 | 7_4:-14035495 | Msa1141120:intron |
ACATCAGAAGTAAACTTGTG+AGG | 0.669577 | 7_4:+14030431 | None:intergenic |
GTCTTCTATAGTACCAAACA+AGG | 0.672696 | 7_4:+14029244 | None:intergenic |
GTAGATCACAAAACAAGACA+AGG | 0.681990 | 7_4:-14035600 | Msa1141120:CDS |
TGATGTTGCAGAGAAAGGAA+TGG | 0.689031 | 7_4:-14030993 | Msa1141120:CDS |
TAGATCACAAAACAAGACAA+GGG | 0.693712 | 7_4:-14035599 | Msa1141120:CDS |
TGACAAGAATCTCCGTAACG+AGG | 0.706301 | 7_4:-14030036 | Msa1141120:intron |
GAGTGGAAGAGAGTTTCTAG+CGG | 0.748562 | 7_4:-14030225 | Msa1141120:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTAATAGTTAGTTTTTTTT+TGG | + | chr7_4:14030116-14030135 | None:intergenic | 10.0% |
!!! | ATTGAATTTCTAAAATAAAT+GGG | + | chr7_4:14031657-14031676 | None:intergenic | 10.0% |
!!! | AATTGAATTTCTAAAATAAA+TGG | + | chr7_4:14031658-14031677 | None:intergenic | 10.0% |
!! | TAATAAAGTTTAATATAAAG+TGG | - | chr7_4:14032014-14032033 | Msa1141120:intron | 10.0% |
!!! | AAAAATATTTTTCTTATGAA+AGG | - | chr7_4:14032661-14032680 | Msa1141120:intron | 10.0% |
!! | TATTATTAGTATATTTACTT+AGG | + | chr7_4:14032981-14033000 | None:intergenic | 10.0% |
!! | GTGTATTAAATATTAAAATT+TGG | + | chr7_4:14033210-14033229 | None:intergenic | 10.0% |
!! | AGTTATATAGTTAAATATTA+AGG | - | chr7_4:14033412-14033431 | Msa1141120:CDS | 10.0% |
!!! | AAAAATTAAAGTTTTGATTG+TGG | - | chr7_4:14029288-14029307 | Msa1141120:intron | 15.0% |
!!! | GAAGTTTATTTTATTTCTAT+TGG | - | chr7_4:14029413-14029432 | Msa1141120:CDS | 15.0% |
!!! | TTATTTCTATTGGAATTTTA+TGG | - | chr7_4:14029423-14029442 | Msa1141120:CDS | 15.0% |
!! | TATATTAATACATATGTTGT+TGG | + | chr7_4:14030014-14030033 | None:intergenic | 15.0% |
!!! | CTCTTTTTTCTTTTATTTAT+TGG | + | chr7_4:14030357-14030376 | None:intergenic | 15.0% |
!!! | TTATTCACAAAATGTTTTTA+AGG | + | chr7_4:14031187-14031206 | None:intergenic | 15.0% |
!!! | AAATATATTTTTGCATGTTA+CGG | + | chr7_4:14031244-14031263 | None:intergenic | 15.0% |
!!! | ATTGATATTTAATATGCTTT+TGG | + | chr7_4:14031454-14031473 | None:intergenic | 15.0% |
!!! | GTCTATTTTAAATAACTTTT+CGG | + | chr7_4:14031739-14031758 | None:intergenic | 15.0% |
!!! | TCATTAATTCTTTAAAAATG+TGG | - | chr7_4:14031770-14031789 | Msa1141120:intron | 15.0% |
!!! | TATAATTATTTTGTGTCATT+TGG | - | chr7_4:14031811-14031830 | Msa1141120:intron | 15.0% |
!!! | CTTTTAATTTGAGTTAATTA+TGG | - | chr7_4:14033131-14033150 | Msa1141120:intron | 15.0% |
!! | TTAGAGATATTTATTTATCA+AGG | + | chr7_4:14035524-14035543 | None:intergenic | 15.0% |
!! | AATATATTTAAAAACATCCC+AGG | + | chr7_4:14029450-14029469 | None:intergenic | 20.0% |
!! | TTATAATTAATGTGTGTTAG+TGG | - | chr7_4:14029589-14029608 | Msa1141120:intron | 20.0% |
!! | TACAAATAATGTGTTAACAA+AGG | - | chr7_4:14029816-14029835 | Msa1141120:intron | 20.0% |
!!! | ATAAAATCATGCCTTTTTTT+TGG | + | chr7_4:14029966-14029985 | None:intergenic | 20.0% |
!!! | AAAAAAAAGGCATGATTTTA+TGG | - | chr7_4:14029965-14029984 | Msa1141120:intron | 20.0% |
!! | ATAAGATTCAATTCCTTTAT+TGG | + | chr7_4:14030642-14030661 | None:intergenic | 20.0% |
!!! | CAGAAAAAATAATGTCATTT+CGG | - | chr7_4:14030692-14030711 | Msa1141120:CDS | 20.0% |
!!! | AGAAAAAATAATGTCATTTC+GGG | - | chr7_4:14030693-14030712 | Msa1141120:CDS | 20.0% |
!!! | AATATATTTTTGCATGTTAC+GGG | + | chr7_4:14031243-14031262 | None:intergenic | 20.0% |
!! | TGCAAAAATATATTTCATTG+TGG | - | chr7_4:14031249-14031268 | Msa1141120:CDS | 20.0% |
!!! | TATTTTTCATGAAAATCGTA+AGG | + | chr7_4:14031695-14031714 | None:intergenic | 20.0% |
!!! | TTAAAAATGTGGTCAAATTT+TGG | - | chr7_4:14031781-14031800 | Msa1141120:intron | 20.0% |
!!! | ATTTTACAACCATATCAAAT+GGG | - | chr7_4:14032865-14032884 | Msa1141120:intron | 20.0% |
!!! | AATTTGGATGTAATTGTTTT+TGG | + | chr7_4:14033194-14033213 | None:intergenic | 20.0% |
!!! | ATACCCTAAAAATTAAGTTT+TGG | - | chr7_4:14033244-14033263 | Msa1141120:intron | 20.0% |
!!! | TTAACAAGGGATTTTAAATT+TGG | - | chr7_4:14034320-14034339 | Msa1141120:intron | 20.0% |
!!! | AACTATGAATAATGGATTAA+GGG | - | chr7_4:14034496-14034515 | Msa1141120:intron | 20.0% |
!!! | TCTTTTGTGAATGAAAAATT+TGG | - | chr7_4:14034545-14034564 | Msa1141120:intron | 20.0% |
!!! | GATTCTATTTCTGATATTAT+GGG | - | chr7_4:14034593-14034612 | Msa1141120:intron | 20.0% |
!! | TTTCACTAGATATATAAATG+TGG | - | chr7_4:14034951-14034970 | Msa1141120:intron | 20.0% |
!! | ATATTAACATAGATAAGTGT+TGG | + | chr7_4:14035135-14035154 | None:intergenic | 20.0% |
!! | ACTTATCTATGTTAATATGA+TGG | - | chr7_4:14035137-14035156 | Msa1141120:intron | 20.0% |
!! | CTTAAAAGAAACTATTAGTT+AGG | + | chr7_4:14035185-14035204 | None:intergenic | 20.0% |
!!! | TAAGCATTTTTGAAGAATTA+GGG | + | chr7_4:14035230-14035249 | None:intergenic | 20.0% |
!!! | ATAAGCATTTTTGAAGAATT+AGG | + | chr7_4:14035231-14035250 | None:intergenic | 20.0% |
!!! | ATTTTACCTAATATTAATGC+AGG | - | chr7_4:14035553-14035572 | Msa1141120:CDS | 20.0% |
! | ATTTCTTGCTAATATACTCA+TGG | - | chr7_4:14029333-14029352 | Msa1141120:intron | 25.0% |
! | AGATTTACAACATATACACA+TGG | + | chr7_4:14029532-14029551 | None:intergenic | 25.0% |
!! | CAACGCATATTGATTATTAT+TGG | + | chr7_4:14029555-14029574 | None:intergenic | 25.0% |
!!! | CTCTTTTGTTTAAAATTCGA+AGG | + | chr7_4:14029668-14029687 | None:intergenic | 25.0% |
!! | CTTCGAATTTTAAACAAAAG+AGG | - | chr7_4:14029666-14029685 | Msa1141120:intron | 25.0% |
! | TTTACTACCAAAGTGAATAA+GGG | + | chr7_4:14029925-14029944 | None:intergenic | 25.0% |
! | ATTTACTACCAAAGTGAATA+AGG | + | chr7_4:14029926-14029945 | None:intergenic | 25.0% |
! | TGTTGGATGATATGATATAA+GGG | + | chr7_4:14029997-14030016 | None:intergenic | 25.0% |
! | TTGTTGGATGATATGATATA+AGG | + | chr7_4:14029998-14030017 | None:intergenic | 25.0% |
!!! | TTTCATTTCCATTTTTGTAG+CGG | - | chr7_4:14030205-14030224 | Msa1141120:CDS | 25.0% |
! | TTGCCATTAAAAAATCCAAA+GGG | + | chr7_4:14030240-14030259 | None:intergenic | 25.0% |
! | TTTGCCATTAAAAAATCCAA+AGG | + | chr7_4:14030241-14030260 | None:intergenic | 25.0% |
!!! | TTATTTATTGGTGTTGTAGT+TGG | + | chr7_4:14030345-14030364 | None:intergenic | 25.0% |
! | TTCAATTCCTTTATTGGAAT+TGG | + | chr7_4:14030636-14030655 | None:intergenic | 25.0% |
!!! | TGACATTATTTTTTCTGGTA+CGG | + | chr7_4:14030689-14030708 | None:intergenic | 25.0% |
!!! | CGAAATGACATTATTTTTTC+TGG | + | chr7_4:14030694-14030713 | None:intergenic | 25.0% |
!!! | GTGAGACAAAAGTATTTTAT+GGG | + | chr7_4:14031044-14031063 | None:intergenic | 25.0% |
! | GGCTAAAAAAATCCATTAAA+AGG | - | chr7_4:14031088-14031107 | Msa1141120:intron | 25.0% |
! | AAAACAAACTACAAGTGTAT+AGG | + | chr7_4:14031114-14031133 | None:intergenic | 25.0% |
! | TACAAAATCAAATGCATGTA+TGG | + | chr7_4:14031144-14031163 | None:intergenic | 25.0% |
!!! | ATGCATTTGATTTTGTATTC+AGG | - | chr7_4:14031147-14031166 | Msa1141120:intron | 25.0% |
! | AAAGAATTTAACGAGGTATA+AGG | + | chr7_4:14031218-14031237 | None:intergenic | 25.0% |
! | ACTTACTTATTATAGGTATC+TGG | + | chr7_4:14031478-14031497 | None:intergenic | 25.0% |
!!! | TGCAATTGTTTTTCTTTGTA+TGG | - | chr7_4:14031526-14031545 | Msa1141120:intron | 25.0% |
!!! | TTGTTTTTCTTTGTATGGAT+AGG | - | chr7_4:14031531-14031550 | Msa1141120:intron | 25.0% |
!! | TGTTTTTCTTTGTATGGATA+GGG | - | chr7_4:14031532-14031551 | Msa1141120:intron | 25.0% |
! | TTATTATGCAAACATGCTTA+AGG | - | chr7_4:14031581-14031600 | Msa1141120:intron | 25.0% |
!! | TGTCATTTGGATAGATAATT+TGG | - | chr7_4:14031824-14031843 | Msa1141120:intron | 25.0% |
!!! | AGACATTATTTGTGTCATTT+TGG | - | chr7_4:14031925-14031944 | Msa1141120:intron | 25.0% |
! | AAGAAGCTTAAAGAACTATA+TGG | + | chr7_4:14032164-14032183 | None:intergenic | 25.0% |
! | AGATATTGGGAAATATGTTA+TGG | - | chr7_4:14032405-14032424 | Msa1141120:CDS | 25.0% |
!! | TTAAGAAACAAAAGCTTGTT+TGG | - | chr7_4:14032569-14032588 | Msa1141120:intron | 25.0% |
!! | CATTTTACAACCATATCAAA+TGG | - | chr7_4:14032864-14032883 | Msa1141120:intron | 25.0% |
!! | GAGCCAAAACTTAATTTTTA+GGG | + | chr7_4:14033250-14033269 | None:intergenic | 25.0% |
!! | AGAGCCAAAACTTAATTTTT+AGG | + | chr7_4:14033251-14033270 | None:intergenic | 25.0% |
!! | TTATATTTTCCCTAATTCAG+AGG | - | chr7_4:14033564-14033583 | Msa1141120:intron | 25.0% |
! | AATTCCCTTACATACAAAAA+GGG | - | chr7_4:14034075-14034094 | Msa1141120:intron | 25.0% |
! | TCTATATGATGAAAATCTAG+TGG | + | chr7_4:14034258-14034277 | None:intergenic | 25.0% |
!! | ACTAGATTTTCATCATATAG+AGG | - | chr7_4:14034257-14034276 | Msa1141120:intron | 25.0% |
!! | TTCTTCAAGTTTCTTAACAA+GGG | - | chr7_4:14034307-14034326 | Msa1141120:intron | 25.0% |
!! | AATTTTTAACACCATGATTC+TGG | + | chr7_4:14034358-14034377 | None:intergenic | 25.0% |
! | GGTGTTAAAAATTCTAACTT+TGG | - | chr7_4:14034365-14034384 | Msa1141120:intron | 25.0% |
! | AAATTCTAACTTTGGATCTT+TGG | - | chr7_4:14034373-14034392 | Msa1141120:intron | 25.0% |
!! | GTAAGAAACAATAACCATTT+TGG | - | chr7_4:14034434-14034453 | Msa1141120:intron | 25.0% |
!!! | GAACTATGAATAATGGATTA+AGG | - | chr7_4:14034495-14034514 | Msa1141120:intron | 25.0% |
!!! | ACTATGAATAATGGATTAAG+GGG | - | chr7_4:14034497-14034516 | Msa1141120:intron | 25.0% |
! | TGTGAATGAAAAATTTGGTT+TGG | - | chr7_4:14034550-14034569 | Msa1141120:intron | 25.0% |
!!! | GGATTCTATTTCTGATATTA+TGG | - | chr7_4:14034592-14034611 | Msa1141120:intron | 25.0% |
! | TATACTCAACATAACTTAGA+TGG | - | chr7_4:14034683-14034702 | Msa1141120:intron | 25.0% |
! | CAACAATTCTGATTACTTAA+TGG | - | chr7_4:14034781-14034800 | Msa1141120:intron | 25.0% |
!!! | GAGTTTTTGTTTGAACTTAT+TGG | + | chr7_4:14035029-14035048 | None:intergenic | 25.0% |
! | TGGTTTAACATAGATACATA+GGG | + | chr7_4:14035115-14035134 | None:intergenic | 25.0% |
! | TTGGTTTAACATAGATACAT+AGG | + | chr7_4:14035116-14035135 | None:intergenic | 25.0% |
! | TATGATGGTCATAATGTAAT+TGG | - | chr7_4:14035152-14035171 | Msa1141120:intron | 25.0% |
! | CAAATTCCTGCATTAATATT+AGG | + | chr7_4:14035562-14035581 | None:intergenic | 25.0% |
! | ATTAATGCAGGAATTTGATA+TGG | - | chr7_4:14035565-14035584 | Msa1141120:CDS | 25.0% |
TAGATCACAAAACAAGACAA+GGG | - | chr7_4:14029245-14029264 | Msa1141120:CDS | 30.0% | |
ATGCCAAATAAACATCATCA+TGG | + | chr7_4:14029315-14029334 | None:intergenic | 30.0% | |
! | TATTGGAATTTTATGGACCT+GGG | - | chr7_4:14029430-14029449 | Msa1141120:CDS | 30.0% |
! | AGACTTTATTTACCTATCAG+CGG | + | chr7_4:14029724-14029743 | None:intergenic | 30.0% |
! | ATTCAAACTCAAGTTGTAAC+AGG | - | chr7_4:14029767-14029786 | Msa1141120:intron | 30.0% |
TTACTACCAAAGTGAATAAG+GGG | + | chr7_4:14029924-14029943 | None:intergenic | 30.0% | |
CTACTTGACAACCAAAAAAA+AGG | - | chr7_4:14029952-14029971 | Msa1141120:intron | 30.0% | |
GTTGGATGATATGATATAAG+GGG | + | chr7_4:14029996-14030015 | None:intergenic | 30.0% | |
! | ATTCTCTGTTGTTCTTTTTC+GGG | + | chr7_4:14030304-14030323 | None:intergenic | 30.0% |
! | GATTCTCTGTTGTTCTTTTT+CGG | + | chr7_4:14030305-14030324 | None:intergenic | 30.0% |
! | ACTACTGTTCTTTTTATGTG+TGG | + | chr7_4:14030594-14030613 | None:intergenic | 30.0% |
TAAAAAGAACAGTAGTGTGA+AGG | - | chr7_4:14030598-14030617 | Msa1141120:CDS | 30.0% | |
AAAAAGAACAGTAGTGTGAA+GGG | - | chr7_4:14030599-14030618 | Msa1141120:CDS | 30.0% | |
CAAAGAACCAATTCCAATAA+AGG | - | chr7_4:14030626-14030645 | Msa1141120:CDS | 30.0% | |
TGCTAGGATTTACTATACTT+TGG | + | chr7_4:14030747-14030766 | None:intergenic | 30.0% | |
!! | TTAAAGAGATTTTGACGAGT+TGG | - | chr7_4:14030976-14030995 | Msa1141120:CDS | 30.0% |
!! | TAAAGAGATTTTGACGAGTT+GGG | - | chr7_4:14030977-14030996 | Msa1141120:CDS | 30.0% |
!!! | GGTGAGACAAAAGTATTTTA+TGG | + | chr7_4:14031045-14031064 | None:intergenic | 30.0% |
! | AGAGTGGAATATTTTCTTGA+TGG | + | chr7_4:14031066-14031085 | None:intergenic | 30.0% |
CAAGAAAATATTCCACTCTT+TGG | - | chr7_4:14031067-14031086 | Msa1141120:intron | 30.0% | |
TCAAATGCATGTATGGTATA+AGG | + | chr7_4:14031137-14031156 | None:intergenic | 30.0% | |
GTGACACACTTACTTATTAT+AGG | + | chr7_4:14031485-14031504 | None:intergenic | 30.0% | |
TTTAGTGCACCTATCAATTT+AGG | + | chr7_4:14031616-14031635 | None:intergenic | 30.0% | |
GGTCAAACTTAAAATTACTG+AGG | + | chr7_4:14031718-14031737 | None:intergenic | 30.0% | |
ATAATGCACAAGAACTAAAG+TGG | + | chr7_4:14032244-14032263 | None:intergenic | 30.0% | |
CTGAAGACTTCAAAGATATT+GGG | - | chr7_4:14032392-14032411 | Msa1141120:CDS | 30.0% | |
! | GAATGCTTCTTTTTGTTCTT+AGG | + | chr7_4:14032502-14032521 | None:intergenic | 30.0% |
! | AGAAACATTTTGTGGAGATA+AGG | + | chr7_4:14032598-14032617 | None:intergenic | 30.0% |
TGCTATTAACCAAATTGGAT+TGG | - | chr7_4:14032621-14032640 | Msa1141120:intron | 30.0% | |
ACTTACTTTCCAATCCAATT+TGG | + | chr7_4:14032633-14032652 | None:intergenic | 30.0% | |
TACTTCTTCCAACCATAAAT+CGG | - | chr7_4:14032728-14032747 | Msa1141120:intron | 30.0% | |
!! | TATTTTTGACGCATTGATAG+CGG | + | chr7_4:14032808-14032827 | None:intergenic | 30.0% |
! | AGTTTAACTTTGTAACCTCA+AGG | + | chr7_4:14032905-14032924 | None:intergenic | 30.0% |
TATGACTAATTGCAACAGTA+AGG | + | chr7_4:14033374-14033393 | None:intergenic | 30.0% | |
! | ACTACAATGTGTTTTTCTTG+TGG | - | chr7_4:14033541-14033560 | Msa1141120:intron | 30.0% |
! | ATGATCTCCAGAATTTTCTT+TGG | + | chr7_4:14033595-14033614 | None:intergenic | 30.0% |
GTTTGCAAATATTGAAGTGT+TGG | + | chr7_4:14033981-14034000 | None:intergenic | 30.0% | |
ACTTCAATATTTGCAAACAC+AGG | - | chr7_4:14033983-14034002 | Msa1141120:intron | 30.0% | |
! | CTTTTTGTATGTAAGGGAAT+TGG | + | chr7_4:14034076-14034095 | None:intergenic | 30.0% |
CAATTCCCTTACATACAAAA+AGG | - | chr7_4:14034074-14034093 | Msa1141120:intron | 30.0% | |
! | TTCAAGATTTGGAACAAGTT+AGG | - | chr7_4:14034105-14034124 | Msa1141120:intron | 30.0% |
! | CTTCTTCAAGTTTCTTAACA+AGG | - | chr7_4:14034306-14034325 | Msa1141120:intron | 30.0% |
ACTTGTGAGGCATAATATTA+GGG | + | chr7_4:14034403-14034422 | None:intergenic | 30.0% | |
AACTTGTGAGGCATAATATT+AGG | + | chr7_4:14034404-14034423 | None:intergenic | 30.0% | |
TATTCAGCTGAATTCCAAAA+TGG | + | chr7_4:14034451-14034470 | None:intergenic | 30.0% | |
! | TTTGGAATTCAGCTGAATAA+TGG | - | chr7_4:14034452-14034471 | Msa1141120:intron | 30.0% |
GGAATTGGAACTATGAATAA+TGG | - | chr7_4:14034488-14034507 | Msa1141120:intron | 30.0% | |
!! | GAAAAATTTGGTTTGGTTCA+AGG | - | chr7_4:14034557-14034576 | Msa1141120:intron | 30.0% |
!! | TCTATTTCTGATATTATGGG+TGG | - | chr7_4:14034596-14034615 | Msa1141120:intron | 30.0% |
!! | CTATTTCTGATATTATGGGT+GGG | - | chr7_4:14034597-14034616 | Msa1141120:intron | 30.0% |
TAACTTAGATGGAAATGTTG+TGG | - | chr7_4:14034694-14034713 | Msa1141120:intron | 30.0% | |
AACTTAGATGGAAATGTTGT+GGG | - | chr7_4:14034695-14034714 | Msa1141120:intron | 30.0% | |
AAAATCTTCATACCTCGTTA+CGG | + | chr7_4:14034823-14034842 | None:intergenic | 30.0% | |
AAGTTCAAACAAAAACTCAC+AGG | - | chr7_4:14035031-14035050 | Msa1141120:intron | 30.0% | |
TAACATAGATACATAGGGAA+AGG | + | chr7_4:14035110-14035129 | None:intergenic | 30.0% | |
AAACCTCAGAAACATTCTAT+TGG | + | chr7_4:14035347-14035366 | None:intergenic | 30.0% | |
! | GAAATGAAGGATTTTCCAAT+GGG | - | chr7_4:14035392-14035411 | Msa1141120:intron | 30.0% |
! | AAATGAAGGATTTTCCAATG+GGG | - | chr7_4:14035393-14035412 | Msa1141120:intron | 30.0% |
GTAGATCACAAAACAAGACA+AGG | - | chr7_4:14029244-14029263 | Msa1141120:CDS | 35.0% | |
! | GGACCATGATGATGTTTATT+TGG | - | chr7_4:14029309-14029328 | Msa1141120:intron | 35.0% |
TTGCTAATATACTCATGGCA+TGG | - | chr7_4:14029338-14029357 | Msa1141120:intron | 35.0% | |
! | CTATTGGAATTTTATGGACC+TGG | - | chr7_4:14029429-14029448 | Msa1141120:CDS | 35.0% |
!! | ATATTCTAAGATCCGCTGAT+AGG | - | chr7_4:14029709-14029728 | Msa1141120:intron | 35.0% |
!!! | CGACCCTTTGGATTTTTTAA+TGG | - | chr7_4:14030234-14030253 | Msa1141120:CDS | 35.0% |
TTCAGGTGTTTGTCTAACTT+GGG | + | chr7_4:14030473-14030492 | None:intergenic | 35.0% | |
! | TTTCAGGTGTTTGTCTAACT+TGG | + | chr7_4:14030474-14030493 | None:intergenic | 35.0% |
GTTAGACAAACACCTGAAAT+CGG | - | chr7_4:14030475-14030494 | Msa1141120:CDS | 35.0% | |
TTAGACAAACACCTGAAATC+GGG | - | chr7_4:14030476-14030495 | Msa1141120:CDS | 35.0% | |
! | TTCTTTTTATGTGTGGAAGG+TGG | + | chr7_4:14030587-14030606 | None:intergenic | 35.0% |
! | CTGTTCTTTTTATGTGTGGA+AGG | + | chr7_4:14030590-14030609 | None:intergenic | 35.0% |
AACCAGAATATCAACCTCAA+GGG | - | chr7_4:14030663-14030682 | Msa1141120:CDS | 35.0% | |
AGTAGACATAGTGATATGCT+AGG | + | chr7_4:14030763-14030782 | None:intergenic | 35.0% | |
ATCTTCAGGAATTGCTTCAT+GGG | + | chr7_4:14030801-14030820 | None:intergenic | 35.0% | |
AATCTTCAGGAATTGCTTCA+TGG | + | chr7_4:14030802-14030821 | None:intergenic | 35.0% | |
ATGTTTGGTATCGTGTTTGT+AGG | + | chr7_4:14030855-14030874 | None:intergenic | 35.0% | |
ACAAACACGATACCAAACAT+CGG | - | chr7_4:14030855-14030874 | Msa1141120:CDS | 35.0% | |
! | TCATCTGTTTGTCACTTGTA+GGG | + | chr7_4:14030887-14030906 | None:intergenic | 35.0% |
! | ATCATCTGTTTGTCACTTGT+AGG | + | chr7_4:14030888-14030907 | None:intergenic | 35.0% |
TCAAAATCTCTTTAAGCGCA+GGG | + | chr7_4:14030971-14030990 | None:intergenic | 35.0% | |
!! | AAAGAGATTTTGACGAGTTG+GGG | - | chr7_4:14030978-14030997 | Msa1141120:CDS | 35.0% |
!!! | GGATTTTTTTAGCCAAAGAG+TGG | + | chr7_4:14031082-14031101 | None:intergenic | 35.0% |
! | CAAGTGTATAGGCCTTTTAA+TGG | + | chr7_4:14031103-14031122 | None:intergenic | 35.0% |
ACGGGAAAAAGAATTTAACG+AGG | + | chr7_4:14031225-14031244 | None:intergenic | 35.0% | |
CGTTATTGCAGAATTTCATC+TGG | - | chr7_4:14031406-14031425 | Msa1141120:intron | 35.0% | |
TATTGCAGAATTTCATCTGG+TGG | - | chr7_4:14031409-14031428 | Msa1141120:intron | 35.0% | |
ATTGCAGAATTTCATCTGGT+GGG | - | chr7_4:14031410-14031429 | Msa1141120:intron | 35.0% | |
TGCAAACATGCTTAAGGATT+TGG | - | chr7_4:14031587-14031606 | Msa1141120:intron | 35.0% | |
GCAAACATGCTTAAGGATTT+GGG | - | chr7_4:14031588-14031607 | Msa1141120:intron | 35.0% | |
ATTTGGGCTCCTAAATTGAT+AGG | - | chr7_4:14031604-14031623 | Msa1141120:intron | 35.0% | |
! | AAAGTACTTGTGAGAGCTTA+TGG | + | chr7_4:14032111-14032130 | None:intergenic | 35.0% |
!! | AGCGTCTTTGAGATTAAACT+TGG | + | chr7_4:14032331-14032350 | None:intergenic | 35.0% |
ATCTCAAAGACGCTAGAAAA+TGG | - | chr7_4:14032337-14032356 | Msa1141120:CDS | 35.0% | |
TTGAAGTCTTCAGCACAAAA+AGG | + | chr7_4:14032385-14032404 | None:intergenic | 35.0% | |
GCTGAAGACTTCAAAGATAT+TGG | - | chr7_4:14032391-14032410 | Msa1141120:CDS | 35.0% | |
GCATTCTTTACTCTTTCTCT+TGG | + | chr7_4:14032524-14032543 | None:intergenic | 35.0% | |
AGAAAGAGTAAAGAATGCCA+AGG | - | chr7_4:14032526-14032545 | Msa1141120:CDS | 35.0% | |
! | TAGCAAGCAGAAACATTTTG+TGG | + | chr7_4:14032606-14032625 | None:intergenic | 35.0% |
!! | CTGCTTGCTATTAACCAAAT+TGG | - | chr7_4:14032616-14032635 | Msa1141120:intron | 35.0% |
TAGACAATACCGTGGAAAAA+TGG | + | chr7_4:14032759-14032778 | None:intergenic | 35.0% | |
ATTCAAAGTAGACAATACCG+TGG | + | chr7_4:14032767-14032786 | None:intergenic | 35.0% | |
TTTCAATGTACACACCACTA+TGG | - | chr7_4:14032840-14032859 | Msa1141120:intron | 35.0% | |
TGGTTGTAAAATGACCATAG+TGG | + | chr7_4:14032857-14032876 | None:intergenic | 35.0% | |
ACCCCACTATCATTGTTTAT+AGG | - | chr7_4:14032955-14032974 | Msa1141120:intron | 35.0% | |
! | GCCTATAAACAATGATAGTG+GGG | + | chr7_4:14032959-14032978 | None:intergenic | 35.0% |
GGCCTATAAACAATGATAGT+GGG | + | chr7_4:14032960-14032979 | None:intergenic | 35.0% | |
AGGCCTATAAACAATGATAG+TGG | + | chr7_4:14032961-14032980 | None:intergenic | 35.0% | |
! | ACATTTTCTCTGGTCAAGTT+TGG | + | chr7_4:14033625-14033644 | None:intergenic | 35.0% |
AAATGTAGCAAGTCACTTAC+AGG | - | chr7_4:14033639-14033658 | Msa1141120:intron | 35.0% | |
ATTTCTCTGATCACAGAACT+CGG | + | chr7_4:14033927-14033946 | None:intergenic | 35.0% | |
GTGTTGGAAATTGGTTGAAA+TGG | + | chr7_4:14034043-14034062 | None:intergenic | 35.0% | |
CAACATGATGTGTTGGAAAT+TGG | + | chr7_4:14034052-14034071 | None:intergenic | 35.0% | |
AATTGGTCAACATGATGTGT+TGG | + | chr7_4:14034059-14034078 | None:intergenic | 35.0% | |
! | CCAACCCTTTTTGTATGTAA+GGG | + | chr7_4:14034082-14034101 | None:intergenic | 35.0% |
TAGGCATGGAAAATCAAAGT+TGG | - | chr7_4:14034124-14034143 | Msa1141120:intron | 35.0% | |
!!! | TTCCAAACCTGTTTTGATCA+TGG | + | chr7_4:14034178-14034197 | None:intergenic | 35.0% |
CATTTGCTTGAAAACATGGA+AGG | + | chr7_4:14034214-14034233 | None:intergenic | 35.0% | |
GAGTCATTTGCTTGAAAACA+TGG | + | chr7_4:14034218-14034237 | None:intergenic | 35.0% | |
GCAAATGACTCATTTGATGA+TGG | - | chr7_4:14034227-14034246 | Msa1141120:intron | 35.0% | |
TCATCATATAGAGGTGAACA+AGG | - | chr7_4:14034266-14034285 | Msa1141120:intron | 35.0% | |
GACATTAGAAACCAGAATCA+TGG | - | chr7_4:14034344-14034363 | Msa1141120:intron | 35.0% | |
ACATCAGAAGTAAACTTGTG+AGG | + | chr7_4:14034416-14034435 | None:intergenic | 35.0% | |
! | AATAATGGAGCAGAAATGGT+TGG | - | chr7_4:14034467-14034486 | Msa1141120:intron | 35.0% |
!! | AAATTTGGTTTGGTTCAAGG+AGG | - | chr7_4:14034560-14034579 | Msa1141120:intron | 35.0% |
!! | AATTTGGTTTGGTTCAAGGA+GGG | - | chr7_4:14034561-14034580 | Msa1141120:intron | 35.0% |
GCGGGATCAATTAATAATGA+AGG | - | chr7_4:14034638-14034657 | Msa1141120:intron | 35.0% | |
!! | TAGTGCTACTTTCACTAATG+AGG | - | chr7_4:14034736-14034755 | Msa1141120:intron | 35.0% |
TGGTCATAATGTAATTGGAG+AGG | - | chr7_4:14035157-14035176 | Msa1141120:intron | 35.0% | |
! | GAACCAATAGAATGTTTCTG+AGG | - | chr7_4:14035341-14035360 | Msa1141120:intron | 35.0% |
TTATGTGATATGTAGTTGCG+AGG | - | chr7_4:14035370-14035389 | Msa1141120:intron | 35.0% | |
! | GGAAATGAAGGATTTTCCAA+TGG | - | chr7_4:14035391-14035410 | Msa1141120:intron | 35.0% |
! | GAACCATCTAATAGGGTTTT+GGG | - | chr7_4:14035415-14035434 | Msa1141120:intron | 35.0% |
ACTTACTAGATTAGTAGCTG+AGG | + | chr7_4:14035464-14035483 | None:intergenic | 35.0% | |
GTCTTCTATAGTACCAAACA+AGG | + | chr7_4:14035603-14035622 | None:intergenic | 35.0% | |
TTGGTACTATAGAAGACAAG+AGG | - | chr7_4:14035606-14035625 | Msa1141120:CDS | 35.0% | |
TGGTACTATAGAAGACAAGA+GGG | - | chr7_4:14035607-14035626 | Msa1141120:CDS | 35.0% | |
CAAAACAAGACAAGGGAAGA+TGG | - | chr7_4:14029252-14029271 | Msa1141120:CDS | 40.0% | |
GACATGCATTGTCATATGCA+GGG | - | chr7_4:14029876-14029895 | Msa1141120:intron | 40.0% | |
ACATGCATTGTCATATGCAG+GGG | - | chr7_4:14029877-14029896 | Msa1141120:intron | 40.0% | |
!! | TTCCATTTTTGTAGCGGTTG+AGG | - | chr7_4:14030211-14030230 | Msa1141120:CDS | 40.0% |
! | GTTGGTCTGCTTCTTATTTC+TGG | + | chr7_4:14030327-14030346 | None:intergenic | 40.0% |
TTGGGAGTTTGTCTATACTC+GGG | + | chr7_4:14030390-14030409 | None:intergenic | 40.0% | |
CTTGGGAGTTTGTCTATACT+CGG | + | chr7_4:14030391-14030410 | None:intergenic | 40.0% | |
!! | CAGAAGTGTTCAGATTGTTG+GGG | + | chr7_4:14030544-14030563 | None:intergenic | 40.0% |
!! | CCAGAAGTGTTCAGATTGTT+GGG | + | chr7_4:14030545-14030564 | None:intergenic | 40.0% |
AGGTGGAGTCAATTCTTTGT+TGG | + | chr7_4:14030570-14030589 | None:intergenic | 40.0% | |
CAACCAGAATATCAACCTCA+AGG | - | chr7_4:14030662-14030681 | Msa1141120:CDS | 40.0% | |
TACTTTGGCATGAAACTGTG+AGG | + | chr7_4:14030732-14030751 | None:intergenic | 40.0% | |
!! | CTTCATGGGTTAGTGTCTTT+AGG | + | chr7_4:14030787-14030806 | None:intergenic | 40.0% |
AGCAATTCCTGAAGATTCCT+AGG | - | chr7_4:14030805-14030824 | Msa1141120:CDS | 40.0% | |
ATCGTGTTTGTAGGTGGTTA+GGG | + | chr7_4:14030846-14030865 | None:intergenic | 40.0% | |
TATCGTGTTTGTAGGTGGTT+AGG | + | chr7_4:14030847-14030866 | None:intergenic | 40.0% | |
TTTGGTATCGTGTTTGTAGG+TGG | + | chr7_4:14030852-14030871 | None:intergenic | 40.0% | |
GTCAAAATCTCTTTAAGCGC+AGG | + | chr7_4:14030972-14030991 | None:intergenic | 40.0% | |
ACCACTCTTCAAGAACATGA+AGG | - | chr7_4:14031371-14031390 | Msa1141120:intron | 40.0% | |
TGCACAAGAACTAAAGTGGT+GGG | + | chr7_4:14032240-14032259 | None:intergenic | 40.0% | |
ATGCACAAGAACTAAAGTGG+TGG | + | chr7_4:14032241-14032260 | None:intergenic | 40.0% | |
CAGTGATGTCTGAAGACAAT+AGG | - | chr7_4:14032305-14032324 | Msa1141120:CDS | 40.0% | |
CTTGAATATCTCTCTGTCCT+TGG | + | chr7_4:14032546-14032565 | None:intergenic | 40.0% | |
! | AAAATGGTGCAGCCGATTTA+TGG | + | chr7_4:14032743-14032762 | None:intergenic | 40.0% |
AGTGCAGATCCCATTTGATA+TGG | + | chr7_4:14032877-14032896 | None:intergenic | 40.0% | |
GTATCCTCTTCAAACTCAAG+TGG | - | chr7_4:14033087-14033106 | Msa1141120:intron | 40.0% | |
ACATCCACTTGAGTTTGAAG+AGG | + | chr7_4:14033094-14033113 | None:intergenic | 40.0% | |
TTGGAACAGCCTCTGAATTA+GGG | + | chr7_4:14033576-14033595 | None:intergenic | 40.0% | |
! | TTTGGAACAGCCTCTGAATT+AGG | + | chr7_4:14033577-14033596 | None:intergenic | 40.0% |
GGCTGTTCCAAAGAAAATTC+TGG | - | chr7_4:14033585-14033604 | Msa1141120:intron | 40.0% | |
!!! | GTGACTTGCTACATTTTCTC+TGG | + | chr7_4:14033635-14033654 | None:intergenic | 40.0% |
TGATGTTGCAGAGAAAGGAA+TGG | - | chr7_4:14033851-14033870 | Msa1141120:intron | 40.0% | |
ACACAGGCATATCAAACAAG+AGG | - | chr7_4:14033999-14034018 | Msa1141120:intron | 40.0% | |
CCCTTACATACAAAAAGGGT+TGG | - | chr7_4:14034079-14034098 | Msa1141120:intron | 40.0% | |
! | GCCAACCCTTTTTGTATGTA+AGG | + | chr7_4:14034083-14034102 | None:intergenic | 40.0% |
! | GATTTGGAACAAGTTAGGCA+TGG | - | chr7_4:14034110-14034129 | Msa1141120:intron | 40.0% |
ACTATTCTCCACAACAGCAT+TGG | + | chr7_4:14034153-14034172 | None:intergenic | 40.0% | |
AATGCTGTTGTGGAGAATAG+TGG | - | chr7_4:14034152-14034171 | Msa1141120:intron | 40.0% | |
ATAGTGGCCATGATCAAAAC+AGG | - | chr7_4:14034168-14034187 | Msa1141120:intron | 40.0% | |
TAGAGGTGAACAAGGATTGA+TGG | - | chr7_4:14034274-14034293 | Msa1141120:intron | 40.0% | |
! | GCTGAATAATGGAGCAGAAA+TGG | - | chr7_4:14034463-14034482 | Msa1141120:intron | 40.0% |
!!! | CACGATGCGATTTTAACTTG+AGG | + | chr7_4:14034990-14035009 | None:intergenic | 40.0% |
! | CTCATCCAAGTTTGCTCTTA+AGG | - | chr7_4:14035319-14035338 | Msa1141120:intron | 40.0% |
TGGTTCCTTAAGAGCAAACT+TGG | + | chr7_4:14035327-14035346 | None:intergenic | 40.0% | |
ATGTAGTTGCGAGGAAATGA+AGG | - | chr7_4:14035379-14035398 | Msa1141120:intron | 40.0% | |
CAATGGGGAACCATCTAATA+GGG | - | chr7_4:14035408-14035427 | Msa1141120:intron | 40.0% | |
! | GGAACCATCTAATAGGGTTT+TGG | - | chr7_4:14035414-14035433 | Msa1141120:intron | 40.0% |
!! | GATCTTGTTGAAGCCTTGTT+TGG | - | chr7_4:14035587-14035606 | Msa1141120:CDS | 40.0% |
CTCATGGCATGGCAATACAA+AGG | - | chr7_4:14029349-14029368 | Msa1141120:intron | 45.0% | |
GGACATGCATTGTCATATGC+AGG | - | chr7_4:14029875-14029894 | Msa1141120:intron | 45.0% | |
!! | AAAGTGAATAAGGGGTGTCC+GGG | + | chr7_4:14029916-14029935 | None:intergenic | 45.0% |
!! | CAAAGTGAATAAGGGGTGTC+CGG | + | chr7_4:14029917-14029936 | None:intergenic | 45.0% |
!!! | TTCTTTTTCGGGTGGTTGCA+TGG | + | chr7_4:14030293-14030312 | None:intergenic | 45.0% |
!!! | CTCTGTTGTTCTTTTTCGGG+TGG | + | chr7_4:14030301-14030320 | None:intergenic | 45.0% |
! | CTTTGGTTGTAGTCTTGGGA+GGG | + | chr7_4:14030427-14030446 | None:intergenic | 45.0% |
! | TCTTTGGTTGTAGTCTTGGG+AGG | + | chr7_4:14030428-14030447 | None:intergenic | 45.0% |
TCCCAAGACTACAACCAAAG+AGG | - | chr7_4:14030427-14030446 | Msa1141120:CDS | 45.0% | |
GCCTCTTTGGTTGTAGTCTT+GGG | + | chr7_4:14030431-14030450 | None:intergenic | 45.0% | |
TGCCTCTTTGGTTGTAGTCT+TGG | + | chr7_4:14030432-14030451 | None:intergenic | 45.0% | |
TTCGTTCTCTACTGCCTCTT+TGG | + | chr7_4:14030444-14030463 | None:intergenic | 45.0% | |
AAAGAGGCAGTAGAGAACGA+AGG | - | chr7_4:14030443-14030462 | Msa1141120:CDS | 45.0% | |
AGGTGTTTGTCTAACTTGGG+TGG | + | chr7_4:14030470-14030489 | None:intergenic | 45.0% | |
CTGGATCTGATATGCGCTTT+GGG | + | chr7_4:14030516-14030535 | None:intergenic | 45.0% | |
CCCAACAATCTGAACACTTC+TGG | - | chr7_4:14030542-14030561 | Msa1141120:CDS | 45.0% | |
!! | GCCAGAAGTGTTCAGATTGT+TGG | + | chr7_4:14030546-14030565 | None:intergenic | 45.0% |
! | TAATGTCATTTCGGGCCTTC+CGG | - | chr7_4:14030701-14030720 | Msa1141120:CDS | 45.0% |
ATGAAACTGTGAGGTCCATC+CGG | + | chr7_4:14030723-14030742 | None:intergenic | 45.0% | |
GGTTTCACCTAGGAATCTTC+AGG | + | chr7_4:14030815-14030834 | None:intergenic | 45.0% | |
TGTTTGTAGGTGGTTAGGGT+GGG | + | chr7_4:14030842-14030861 | None:intergenic | 45.0% | |
! | TCTGTTTGTCACTTGTAGGG+TGG | + | chr7_4:14030884-14030903 | None:intergenic | 45.0% |
! | TGAGGAGAGTGTGGAAATAG+TGG | + | chr7_4:14030911-14030930 | None:intergenic | 45.0% |
CCTGCAGCTTATCCTTGATA+GGG | + | chr7_4:14031004-14031023 | None:intergenic | 45.0% | |
CAAAGCATGACGAGCATCTT+TGG | + | chr7_4:14031351-14031370 | None:intergenic | 45.0% | |
GCCTTCATGTTCTTGAAGAG+TGG | + | chr7_4:14031375-14031394 | None:intergenic | 45.0% | |
GATCTGCACTTCTTACCTTG+AGG | - | chr7_4:14032887-14032906 | Msa1141120:intron | 45.0% | |
TGCACTAGGTGCTAGTTAAC+TGG | + | chr7_4:14032932-14032951 | None:intergenic | 45.0% | |
GTTGCAGAGAAAGGAATGGT+TGG | - | chr7_4:14033855-14033874 | Msa1141120:intron | 45.0% | |
!! | AGGGTTGGCTCTTCAAGATT+TGG | - | chr7_4:14034094-14034113 | Msa1141120:intron | 45.0% |
GGCCATGATCAAAACAGGTT+TGG | - | chr7_4:14034173-14034192 | Msa1141120:intron | 45.0% | |
GGAGCAGAAATGGTTGGAAT+TGG | - | chr7_4:14034473-14034492 | Msa1141120:intron | 45.0% | |
TCTGATATTATGGGTGGGAG+TGG | - | chr7_4:14034602-14034621 | Msa1141120:intron | 45.0% | |
! | GAGTGGAAGAGAGTTTCTAG+CGG | - | chr7_4:14034619-14034638 | Msa1141120:intron | 45.0% |
!! | AGTGGAAGAGAGTTTCTAGC+GGG | - | chr7_4:14034620-14034639 | Msa1141120:intron | 45.0% |
TGACAAGAATCTCCGTAACG+AGG | - | chr7_4:14034808-14034827 | Msa1141120:intron | 45.0% | |
AACTCACAGGCAAGTCTCAT+TGG | - | chr7_4:14035044-14035063 | Msa1141120:intron | 45.0% | |
CCTATTAGATGGTTCCCCAT+TGG | + | chr7_4:14035410-14035429 | None:intergenic | 45.0% | |
CCAATGGGGAACCATCTAAT+AGG | - | chr7_4:14035407-14035426 | Msa1141120:intron | 45.0% | |
CCTCCCAAAACCCTATTAGA+TGG | + | chr7_4:14035421-14035440 | None:intergenic | 45.0% | |
!!! | CCATCTAATAGGGTTTTGGG+AGG | - | chr7_4:14035418-14035437 | Msa1141120:intron | 45.0% |
!! | ATTATTTAATTAATATTATG+TGG | - | chr7_4:14029388-14029407 | Msa1141120:intron | 5.0% |
!!! | TATTTTGATAAATAATTTAA+AGG | - | chr7_4:14031958-14031977 | Msa1141120:intron | 5.0% |
!!! | ATTTTGATAAATAATTTAAA+GGG | - | chr7_4:14031959-14031978 | Msa1141120:intron | 5.0% |
! | AAAGGCATGATTTGTCCCCG+TGG | - | chr7_4:14029834-14029853 | Msa1141120:intron | 50.0% |
! | AAGGCATGATTTGTCCCCGT+GGG | - | chr7_4:14029835-14029854 | Msa1141120:intron | 50.0% |
TGCCAACTGAGTTATGCCCA+CGG | + | chr7_4:14029854-14029873 | None:intergenic | 50.0% | |
TGGGCATAACTCAGTTGGCA+AGG | - | chr7_4:14029854-14029873 | Msa1141120:intron | 50.0% | |
ATTGTCATATGCAGGGGCCA+GGG | - | chr7_4:14029883-14029902 | Msa1141120:intron | 50.0% | |
!! | AAGTGAATAAGGGGTGTCCG+GGG | + | chr7_4:14029915-14029934 | None:intergenic | 50.0% |
CGGACACCCCTTATTCACTT+TGG | - | chr7_4:14029915-14029934 | Msa1141120:intron | 50.0% | |
CGCCTCAACCGCTACAAAAA+TGG | + | chr7_4:14030216-14030235 | None:intergenic | 50.0% | |
!! | TGCGCTTTGGGCTTTTGAGT+CGG | + | chr7_4:14030504-14030523 | None:intergenic | 50.0% |
GCTGGATCTGATATGCGCTT+TGG | + | chr7_4:14030517-14030536 | None:intergenic | 50.0% | |
!! | GGCCCTTGAGGTTGATATTC+TGG | + | chr7_4:14030668-14030687 | None:intergenic | 50.0% |
!! | TTTTTCTGGTACGGCCCTTG+AGG | + | chr7_4:14030680-14030699 | None:intergenic | 50.0% |
TTTGTAGGTGGTTAGGGTGG+GGG | + | chr7_4:14030840-14030859 | None:intergenic | 50.0% | |
GTTTGTAGGTGGTTAGGGTG+GGG | + | chr7_4:14030841-14030860 | None:intergenic | 50.0% | |
GTGTTTGTAGGTGGTTAGGG+TGG | + | chr7_4:14030843-14030862 | None:intergenic | 50.0% | |
TCCACACTCTCCTCACGAAT+TGG | - | chr7_4:14030916-14030935 | Msa1141120:CDS | 50.0% | |
CCACACTCTCCTCACGAATT+GGG | - | chr7_4:14030917-14030936 | Msa1141120:CDS | 50.0% | |
CTCTATGTGCCCAATTCGTG+AGG | + | chr7_4:14030929-14030948 | None:intergenic | 50.0% | |
CCCTATCAAGGATAAGCTGC+AGG | - | chr7_4:14031001-14031020 | Msa1141120:CDS | 50.0% | |
GCCTGCAGCTTATCCTTGAT+AGG | + | chr7_4:14031005-14031024 | None:intergenic | 50.0% | |
AGCTGCAGGCTGAACTTTAG+AGG | - | chr7_4:14031015-14031034 | Msa1141120:CDS | 50.0% | |
GCTGCAGGCTGAACTTTAGA+GGG | - | chr7_4:14031016-14031035 | Msa1141120:CDS | 50.0% | |
AGCATGACGAGCATCTTTGG+CGG | + | chr7_4:14031348-14031367 | None:intergenic | 50.0% | |
! | TGGTGCAGCCGATTTATGGT+TGG | + | chr7_4:14032739-14032758 | None:intergenic | 50.0% |
!! | TCGGCTGCACCATTTTTCCA+CGG | - | chr7_4:14032747-14032766 | Msa1141120:intron | 50.0% |
!! | GATAGTGGGGTTTGTGCACT+AGG | + | chr7_4:14032946-14032965 | None:intergenic | 50.0% |
CTGCGTGATGTTGCAGAGAA+AGG | - | chr7_4:14033846-14033865 | Msa1141120:intron | 50.0% | |
GCAGAGAAAGGAATGGTTGG+AGG | - | chr7_4:14033858-14033877 | Msa1141120:intron | 50.0% | |
GTTGGAAGCCAATGCTGTTG+TGG | - | chr7_4:14034142-14034161 | Msa1141120:intron | 50.0% | |
! | GGTTTGGTTCAAGGAGGGTT+TGG | - | chr7_4:14034566-14034585 | Msa1141120:intron | 50.0% |
CCAACTGAGTTATGCCCACG+GGG | + | chr7_4:14029852-14029871 | None:intergenic | 55.0% | |
GCCAACTGAGTTATGCCCAC+GGG | + | chr7_4:14029853-14029872 | None:intergenic | 55.0% | |
CATTGTCATATGCAGGGGCC+AGG | - | chr7_4:14029882-14029901 | Msa1141120:intron | 55.0% | |
AGGGACTCGCTGGGTAACTT+GGG | + | chr7_4:14030408-14030427 | None:intergenic | 55.0% | |
TTGAGTCGGGACCCGATTTC+AGG | + | chr7_4:14030490-14030509 | None:intergenic | 55.0% | |
!! | GCGCTTTGGGCTTTTGAGTC+GGG | + | chr7_4:14030503-14030522 | None:intergenic | 55.0% |
TCAGATTGTTGGGGCAGAGC+TGG | + | chr7_4:14030535-14030554 | None:intergenic | 55.0% | |
AACTGTGAGGTCCATCCGGA+AGG | + | chr7_4:14030719-14030738 | None:intergenic | 55.0% | |
GTAGGGTGGAGTCCGATGTT+TGG | + | chr7_4:14030870-14030889 | None:intergenic | 55.0% | |
CCCAATTCGTGAGGAGAGTG+TGG | + | chr7_4:14030920-14030939 | None:intergenic | 55.0% | |
GGCATGTCTCACAGAGCTCT+AGG | - | chr7_4:14033879-14033898 | Msa1141120:intron | 55.0% | |
! | GGTTCAAGGAGGGTTTGGTC+TGG | - | chr7_4:14034571-14034590 | Msa1141120:intron | 55.0% |
CCCCGTGGGCATAACTCAGT+TGG | - | chr7_4:14029849-14029868 | Msa1141120:intron | 60.0% | |
TAGCGGTTGAGGCGACCCTT+TGG | - | chr7_4:14030222-14030241 | Msa1141120:CDS | 60.0% | |
GAGGGACTCGCTGGGTAACT+TGG | + | chr7_4:14030409-14030428 | None:intergenic | 60.0% | |
AGTCTTGGGAGGGACTCGCT+GGG | + | chr7_4:14030417-14030436 | None:intergenic | 60.0% | |
! | TAGTCTTGGGAGGGACTCGC+TGG | + | chr7_4:14030418-14030437 | None:intergenic | 60.0% |
GTCATTTCGGGCCTTCCGGA+TGG | - | chr7_4:14030705-14030724 | Msa1141120:CDS | 60.0% | |
TAGGTGGTTAGGGTGGGGGT+GGG | + | chr7_4:14030836-14030855 | None:intergenic | 60.0% | |
! | GACGAGTTGGGGCCCTATCA+AGG | - | chr7_4:14030989-14031008 | Msa1141120:CDS | 60.0% |
! | GGTGGGGGTGGGTTTCACCT+AGG | + | chr7_4:14030825-14030844 | None:intergenic | 65.0% |
GTAGGTGGTTAGGGTGGGGG+TGG | + | chr7_4:14030837-14030856 | None:intergenic | 65.0% | |
AGGGGCCAGGGTTCGAACCC+CGG | - | chr7_4:14029895-14029914 | Msa1141120:intron | 70.0% | |
GGTGTCCGGGGTTCGAACCC+TGG | + | chr7_4:14029903-14029922 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 14029232 | 14035634 | 14029232 | ID=Msa1141120;Name=Msa1141120 |
chr7_4 | mRNA | 14029232 | 14035634 | 14029232 | ID=Msa1141120-mRNA-1;Parent=Msa1141120;Name=Msa1141120-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|0.85|1|1|7|0|619 |
chr7_4 | exon | 14035496 | 14035634 | 14035496 | ID=Msa1141120-mRNA-1:exon:3308;Parent=Msa1141120-mRNA-1 |
chr7_4 | exon | 14033375 | 14033527 | 14033375 | ID=Msa1141120-mRNA-1:exon:3307;Parent=Msa1141120-mRNA-1 |
chr7_4 | exon | 14032220 | 14032558 | 14032220 | ID=Msa1141120-mRNA-1:exon:3306;Parent=Msa1141120-mRNA-1 |
chr7_4 | exon | 14031206 | 14031282 | 14031206 | ID=Msa1141120-mRNA-1:exon:3305;Parent=Msa1141120-mRNA-1 |
chr7_4 | exon | 14030037 | 14031035 | 14030037 | ID=Msa1141120-mRNA-1:exon:3304;Parent=Msa1141120-mRNA-1 |
chr7_4 | exon | 14029389 | 14029481 | 14029389 | ID=Msa1141120-mRNA-1:exon:3303;Parent=Msa1141120-mRNA-1 |
chr7_4 | exon | 14029232 | 14029291 | 14029232 | ID=Msa1141120-mRNA-1:exon:3302;Parent=Msa1141120-mRNA-1 |
chr7_4 | CDS | 14035496 | 14035634 | 14035496 | ID=Msa1141120-mRNA-1:cds;Parent=Msa1141120-mRNA-1 |
chr7_4 | CDS | 14033375 | 14033527 | 14033375 | ID=Msa1141120-mRNA-1:cds;Parent=Msa1141120-mRNA-1 |
chr7_4 | CDS | 14032220 | 14032558 | 14032220 | ID=Msa1141120-mRNA-1:cds;Parent=Msa1141120-mRNA-1 |
chr7_4 | CDS | 14031206 | 14031282 | 14031206 | ID=Msa1141120-mRNA-1:cds;Parent=Msa1141120-mRNA-1 |
chr7_4 | CDS | 14030037 | 14031035 | 14030037 | ID=Msa1141120-mRNA-1:cds;Parent=Msa1141120-mRNA-1 |
chr7_4 | CDS | 14029389 | 14029481 | 14029389 | ID=Msa1141120-mRNA-1:cds;Parent=Msa1141120-mRNA-1 |
chr7_4 | CDS | 14029232 | 14029291 | 14029232 | ID=Msa1141120-mRNA-1:cds;Parent=Msa1141120-mRNA-1 |
Gene Sequence |
Protein sequence |