Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1141130 | AES78253.1 | 87.119 | 590 | 61 | 2 | 44 | 619 | 14 | 602 | 0.0 | 983 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1141130 | sp|Q9ZWJ9|ARR2_ARATH | 36.032 | 247 | 136 | 3 | 19 | 243 | 26 | 272 | 9.87e-45 | 172 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1141130 | G7L033 | 87.119 | 590 | 61 | 2 | 44 | 619 | 14 | 602 | 0.0 | 983 |
Gene ID | Type | Classification |
---|---|---|
Msa1141130 | TR | Others |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1141130 | MtrunA17_Chr7g0223971 | 82.081 | 519 | 45 | 3 | 99 | 570 | 1 | 518 | 0.0 | 791 |
Msa1141130 | MtrunA17_Chr6g0473731 | 44.828 | 435 | 161 | 12 | 97 | 503 | 10 | 393 | 3.04e-95 | 299 |
Msa1141130 | MtrunA17_Chr7g0223991 | 71.628 | 215 | 40 | 4 | 254 | 466 | 24 | 219 | 2.20e-91 | 281 |
Msa1141130 | MtrunA17_Chr2g0294911 | 38.235 | 238 | 135 | 4 | 21 | 246 | 33 | 270 | 1.78e-43 | 164 |
Msa1141130 | MtrunA17_Chr4g0067981 | 35.124 | 242 | 139 | 2 | 21 | 246 | 35 | 274 | 2.12e-42 | 162 |
Msa1141130 | MtrunA17_Chr3g0123131 | 35.227 | 264 | 145 | 5 | 21 | 261 | 17 | 277 | 1.89e-41 | 158 |
Msa1141130 | MtrunA17_Chr1g0161431 | 36.364 | 242 | 135 | 5 | 21 | 243 | 15 | 256 | 4.13e-41 | 158 |
Msa1141130 | MtrunA17_Chr1g0149841 | 35.124 | 242 | 141 | 2 | 21 | 246 | 9 | 250 | 1.56e-40 | 154 |
Msa1141130 | MtrunA17_Chr8g0376881 | 34.586 | 266 | 156 | 5 | 14 | 261 | 22 | 287 | 1.68e-40 | 155 |
Msa1141130 | MtrunA17_Chr6g0471041 | 35.808 | 229 | 133 | 2 | 22 | 249 | 19 | 234 | 9.17e-40 | 150 |
Msa1141130 | MtrunA17_Chr3g0137101 | 36.290 | 248 | 134 | 4 | 21 | 246 | 12 | 257 | 2.30e-39 | 153 |
Msa1141130 | MtrunA17_Chr4g0009851 | 32.087 | 321 | 177 | 10 | 21 | 327 | 15 | 308 | 1.28e-38 | 144 |
Msa1141130 | MtrunA17_Chr4g0009901 | 35.169 | 236 | 133 | 4 | 21 | 252 | 14 | 233 | 2.00e-38 | 143 |
Msa1141130 | MtrunA17_Chr7g0275401 | 34.728 | 239 | 137 | 3 | 23 | 243 | 11 | 248 | 1.15e-36 | 139 |
Msa1141130 | MtrunA17_Chr7g0275891 | 32.157 | 255 | 144 | 4 | 21 | 246 | 9 | 263 | 1.92e-35 | 137 |
Msa1141130 | MtrunA17_Chr4g0074411 | 32.377 | 244 | 152 | 2 | 21 | 251 | 22 | 265 | 1.78e-34 | 138 |
Msa1141130 | MtrunA17_Chr4g0009981 | 30.545 | 275 | 161 | 7 | 62 | 327 | 2 | 255 | 2.29e-34 | 131 |
Msa1141130 | MtrunA17_Chr2g0304841 | 31.095 | 283 | 162 | 5 | 3 | 254 | 2 | 282 | 2.40e-34 | 139 |
Msa1141130 | MtrunA17_Chr4g0074401 | 32.932 | 249 | 151 | 3 | 21 | 253 | 21 | 269 | 3.16e-32 | 131 |
Msa1141130 | MtrunA17_Chr1g0149851 | 32.103 | 271 | 139 | 4 | 21 | 253 | 9 | 272 | 3.51e-32 | 131 |
Msa1141130 | MtrunA17_Chr3g0134481 | 33.028 | 218 | 100 | 2 | 21 | 238 | 12 | 183 | 5.73e-31 | 119 |
Msa1141130 | MtrunA17_Chr3g0134461 | 35.023 | 217 | 104 | 3 | 21 | 236 | 12 | 192 | 1.05e-30 | 119 |
Msa1141130 | MtrunA17_Chr4g0074421 | 35.979 | 189 | 106 | 4 | 66 | 241 | 1 | 187 | 9.10e-25 | 102 |
Msa1141130 | MtrunA17_Chr1g0149831 | 32.812 | 192 | 93 | 5 | 78 | 246 | 6 | 184 | 1.36e-22 | 97.1 |
Msa1141130 | MtrunA17_Chr8g0391911 | 27.413 | 259 | 150 | 6 | 19 | 251 | 11 | 257 | 9.61e-19 | 86.3 |
Msa1141130 | MtrunA17_Chr4g0031961 | 44.792 | 96 | 43 | 3 | 180 | 271 | 124 | 213 | 2.34e-18 | 86.3 |
Msa1141130 | MtrunA17_Chr7g0255711 | 51.515 | 66 | 32 | 0 | 178 | 243 | 82 | 147 | 1.19e-17 | 84.0 |
Msa1141130 | MtrunA17_Chr4g0009991 | 36.434 | 129 | 66 | 2 | 110 | 236 | 2 | 116 | 1.77e-17 | 79.0 |
Msa1141130 | MtrunA17_Chr4g0011071 | 29.139 | 151 | 88 | 3 | 67 | 213 | 39 | 174 | 2.76e-16 | 77.4 |
Msa1141130 | MtrunA17_Chr8g0383961 | 29.596 | 223 | 120 | 7 | 21 | 243 | 18 | 203 | 1.36e-15 | 77.4 |
Msa1141130 | MtrunA17_Chr2g0324891 | 44.444 | 90 | 49 | 1 | 150 | 239 | 125 | 213 | 3.82e-15 | 78.2 |
Msa1141130 | MtrunA17_Chr4g0040481 | 61.111 | 54 | 21 | 0 | 186 | 239 | 157 | 210 | 7.40e-15 | 77.0 |
Msa1141130 | MtrunA17_Chr4g0054981 | 50.794 | 63 | 31 | 0 | 186 | 248 | 309 | 371 | 5.89e-14 | 75.1 |
Msa1141130 | MtrunA17_Chr5g0400241 | 53.333 | 60 | 28 | 0 | 186 | 245 | 310 | 369 | 8.51e-14 | 74.3 |
Msa1141130 | MtrunA17_Chr4g0061021 | 27.273 | 154 | 109 | 1 | 19 | 169 | 31 | 184 | 1.93e-12 | 70.1 |
Msa1141130 | MtrunA17_Chr3g0091641 | 34.862 | 109 | 68 | 1 | 19 | 124 | 22 | 130 | 2.00e-12 | 70.1 |
Msa1141130 | MtrunA17_Chr6g0469321 | 61.364 | 44 | 17 | 0 | 203 | 246 | 70 | 113 | 4.68e-12 | 65.1 |
Msa1141130 | MtrunA17_Chr5g0417521 | 54.545 | 55 | 24 | 1 | 187 | 240 | 15 | 69 | 1.19e-11 | 66.6 |
Msa1141130 | MtrunA17_Chr6g0461641 | 54.545 | 55 | 24 | 1 | 187 | 240 | 42 | 96 | 1.46e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1141130 | AT5G07210.2 | 35.959 | 292 | 135 | 7 | 18 | 263 | 13 | 298 | 5.09e-44 | 167 |
Msa1141130 | AT3G16857.1 | 35.135 | 259 | 134 | 3 | 19 | 243 | 35 | 293 | 8.72e-44 | 167 |
Msa1141130 | AT3G16857.2 | 35.135 | 259 | 134 | 3 | 19 | 243 | 35 | 293 | 1.32e-43 | 166 |
Msa1141130 | AT5G07210.1 | 35.000 | 300 | 135 | 8 | 18 | 263 | 13 | 306 | 2.40e-41 | 159 |
Msa1141130 | AT2G01760.1 | 35.060 | 251 | 140 | 4 | 19 | 246 | 9 | 259 | 5.24e-39 | 148 |
Msa1141130 | AT2G25180.1 | 35.294 | 238 | 142 | 2 | 21 | 246 | 17 | 254 | 4.81e-38 | 149 |
Msa1141130 | AT3G16857.3 | 35.586 | 222 | 109 | 3 | 56 | 243 | 2 | 223 | 3.14e-37 | 147 |
Msa1141130 | AT4G31920.1 | 35.345 | 232 | 146 | 2 | 21 | 250 | 17 | 246 | 4.74e-37 | 145 |
Msa1141130 | AT2G27070.1 | 30.841 | 321 | 167 | 9 | 18 | 293 | 13 | 323 | 2.47e-36 | 144 |
Msa1141130 | AT1G67710.1 | 35.772 | 246 | 140 | 5 | 21 | 249 | 11 | 255 | 1.12e-34 | 138 |
Msa1141130 | AT2G01760.2 | 34.959 | 246 | 133 | 6 | 24 | 246 | 46 | 287 | 1.87e-33 | 133 |
Msa1141130 | AT5G49240.1 | 31.915 | 235 | 137 | 3 | 21 | 236 | 42 | 272 | 4.40e-32 | 126 |
Msa1141130 | AT5G58080.1 | 30.168 | 358 | 194 | 10 | 9 | 323 | 6 | 350 | 1.63e-31 | 130 |
Msa1141130 | AT2G01760.3 | 34.536 | 194 | 104 | 4 | 76 | 246 | 1 | 194 | 6.12e-26 | 109 |
Msa1141130 | AT3G62670.1 | 31.878 | 229 | 143 | 6 | 22 | 239 | 42 | 268 | 1.62e-24 | 107 |
Msa1141130 | AT1G49190.1 | 31.148 | 244 | 143 | 5 | 23 | 244 | 36 | 276 | 2.52e-23 | 103 |
Msa1141130 | AT1G67710.2 | 36.170 | 188 | 102 | 5 | 79 | 249 | 4 | 190 | 1.89e-22 | 101 |
Msa1141130 | AT1G67710.3 | 36.842 | 171 | 90 | 5 | 96 | 249 | 12 | 181 | 1.26e-18 | 89.4 |
Msa1141130 | AT5G05090.1 | 31.720 | 186 | 115 | 4 | 175 | 353 | 69 | 249 | 1.88e-18 | 86.3 |
Msa1141130 | AT5G59570.2 | 38.393 | 112 | 58 | 2 | 145 | 245 | 88 | 199 | 2.17e-18 | 86.7 |
Msa1141130 | AT5G59570.1 | 38.393 | 112 | 58 | 2 | 145 | 245 | 88 | 199 | 2.17e-18 | 86.7 |
Msa1141130 | AT2G40970.1 | 53.030 | 66 | 31 | 0 | 178 | 243 | 96 | 161 | 8.28e-18 | 84.0 |
Msa1141130 | AT3G10760.1 | 49.296 | 71 | 36 | 0 | 173 | 243 | 91 | 161 | 9.16e-18 | 85.5 |
Msa1141130 | AT3G46640.2 | 51.471 | 68 | 31 | 1 | 178 | 243 | 133 | 200 | 9.94e-18 | 85.1 |
Msa1141130 | AT3G46640.1 | 51.471 | 68 | 31 | 1 | 178 | 243 | 133 | 200 | 9.94e-18 | 85.1 |
Msa1141130 | AT3G46640.3 | 54.098 | 61 | 28 | 0 | 183 | 243 | 140 | 200 | 1.77e-17 | 84.3 |
Msa1141130 | AT5G44190.1 | 62.500 | 56 | 21 | 0 | 184 | 239 | 144 | 199 | 3.12e-16 | 81.6 |
Msa1141130 | AT5G44190.2 | 62.500 | 56 | 21 | 0 | 184 | 239 | 144 | 199 | 3.25e-16 | 80.9 |
Msa1141130 | AT2G20570.1 | 48.000 | 75 | 39 | 0 | 165 | 239 | 131 | 205 | 4.48e-14 | 75.1 |
Msa1141130 | AT2G20570.2 | 60.784 | 51 | 20 | 0 | 189 | 239 | 171 | 221 | 2.27e-13 | 73.2 |
Msa1141130 | AT4G18020.8 | 32.624 | 141 | 76 | 3 | 127 | 248 | 217 | 357 | 2.58e-13 | 73.2 |
Msa1141130 | AT4G18020.11 | 32.624 | 141 | 76 | 3 | 127 | 248 | 217 | 357 | 2.58e-13 | 73.2 |
Msa1141130 | AT4G18020.4 | 32.624 | 141 | 76 | 3 | 127 | 248 | 217 | 357 | 2.58e-13 | 73.2 |
Msa1141130 | AT4G18020.5 | 32.624 | 141 | 76 | 3 | 127 | 248 | 217 | 357 | 2.58e-13 | 73.2 |
Msa1141130 | AT4G18020.10 | 32.624 | 141 | 76 | 3 | 127 | 248 | 217 | 357 | 2.58e-13 | 73.2 |
Msa1141130 | AT4G18020.7 | 32.624 | 141 | 76 | 3 | 127 | 248 | 217 | 357 | 2.58e-13 | 73.2 |
Msa1141130 | AT4G18020.3 | 32.624 | 141 | 76 | 3 | 127 | 248 | 217 | 357 | 3.27e-13 | 72.8 |
Msa1141130 | AT4G18020.2 | 32.624 | 141 | 76 | 3 | 127 | 248 | 217 | 357 | 3.27e-13 | 72.8 |
Msa1141130 | AT4G18020.1 | 32.624 | 141 | 76 | 3 | 127 | 248 | 217 | 357 | 3.27e-13 | 72.8 |
Msa1141130 | AT4G18020.6 | 32.624 | 141 | 76 | 3 | 127 | 248 | 217 | 357 | 3.27e-13 | 72.8 |
Msa1141130 | AT4G18020.9 | 32.624 | 141 | 76 | 3 | 127 | 248 | 217 | 357 | 3.27e-13 | 72.8 |
Msa1141130 | AT5G61380.1 | 27.778 | 126 | 88 | 1 | 19 | 141 | 17 | 142 | 9.80e-12 | 68.6 |
Msa1141130 | AT3G04450.3 | 36.190 | 105 | 54 | 3 | 137 | 239 | 198 | 291 | 1.13e-11 | 66.6 |
Msa1141130 | AT1G49190.2 | 29.661 | 118 | 83 | 0 | 23 | 140 | 36 | 153 | 2.60e-11 | 67.0 |
Msa1141130 | AT3G04450.1 | 52.632 | 57 | 26 | 1 | 184 | 239 | 235 | 291 | 2.62e-11 | 66.6 |
Msa1141130 | AT3G04450.4 | 52.632 | 57 | 26 | 1 | 184 | 239 | 195 | 251 | 2.79e-11 | 66.2 |
Msa1141130 | AT3G04450.2 | 52.632 | 57 | 26 | 1 | 184 | 239 | 195 | 251 | 2.79e-11 | 66.2 |
Msa1141130 | AT3G04030.1 | 52.727 | 55 | 25 | 1 | 187 | 240 | 45 | 99 | 4.87e-11 | 65.5 |
Msa1141130 | AT5G29000.4 | 50.877 | 57 | 27 | 1 | 184 | 239 | 228 | 284 | 4.88e-11 | 64.7 |
Msa1141130 | AT5G29000.1 | 50.877 | 57 | 27 | 1 | 184 | 239 | 185 | 241 | 4.96e-11 | 65.5 |
Msa1141130 | AT5G29000.3 | 50.877 | 57 | 27 | 1 | 184 | 239 | 185 | 241 | 4.96e-11 | 65.5 |
Msa1141130 | AT3G04030.3 | 52.727 | 55 | 25 | 1 | 187 | 240 | 45 | 99 | 5.38e-11 | 65.5 |
Find 111 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAACAATTCTGATTACTTAA+TGG | 0.142693 | 7_4:-14118385 | Msa1141130:CDS |
GGATTCTATTTCTGATATTA+TGG | 0.186158 | 7_4:-14118574 | Msa1141130:CDS |
GTAAGAAACAATAACCATTT+TGG | 0.206140 | 7_4:-14118732 | Msa1141130:CDS |
AAATTCTAACTTTGGATCTT+TGG | 0.211667 | 7_4:-14118793 | Msa1141130:CDS |
GCTGAAGACTTCAAAGATAT+TGG | 0.226006 | 7_4:-14120601 | Msa1141130:CDS |
GAACTATGAATAATGGATTA+AGG | 0.229051 | 7_4:-14118671 | Msa1141130:CDS |
CAATTCCCTTACATACAAAA+AGG | 0.230043 | 7_4:-14119092 | Msa1141130:CDS |
GGACCATGATGATGTTTATT+TGG | 0.237699 | 7_4:-14123688 | Msa1141130:CDS |
CCAATGGGGAACCATCTAAT+AGG | 0.237832 | 7_4:-14117759 | Msa1141130:CDS |
ACTTACTTTCCAATCCAATT+TGG | 0.246719 | 7_4:+14120362 | None:intergenic |
ATTGATATTTAATATGCTTT+TGG | 0.251059 | 7_4:+14121541 | None:intergenic |
CTGCTTGCTATTAACCAAAT+TGG | 0.262572 | 7_4:-14120376 | Msa1141130:CDS |
AACTTGTGAGGCATAATATT+AGG | 0.274422 | 7_4:+14118765 | None:intergenic |
AAATGTAGCAAGTCACTTAC+AGG | 0.277878 | 7_4:-14119527 | Msa1141130:intron |
AGGGTTGGCTCTTCAAGATT+TGG | 0.280377 | 7_4:-14119072 | Msa1141130:CDS |
GTGACACACTTACTTATTAT+AGG | 0.282733 | 7_4:+14121510 | None:intergenic |
CAAAGCATGACGAGCATCTT+TGG | 0.286240 | 7_4:+14121644 | None:intergenic |
CAACATGATGTGTTGGAAAT+TGG | 0.289454 | 7_4:+14119117 | None:intergenic |
ATCTCAAAGACGCTAGAAAA+TGG | 0.291584 | 7_4:-14120655 | Msa1141130:CDS |
TTTGGAATTCAGCTGAATAA+TGG | 0.297513 | 7_4:-14118714 | Msa1141130:CDS |
ACTTACTTATTATAGGTATC+TGG | 0.300133 | 7_4:+14121517 | None:intergenic |
ATTAATGCAGGAATTTGATA+TGG | 0.300210 | 7_4:-14117601 | Msa1141130:intron |
TATTCAGCTGAATTCCAAAA+TGG | 0.301790 | 7_4:+14118718 | None:intergenic |
TTAAGAAACAAAAGCTTGTT+TGG | 0.309580 | 7_4:-14120423 | Msa1141130:CDS |
GGAACCATCTAATAGGGTTT+TGG | 0.309810 | 7_4:-14117752 | Msa1141130:CDS |
GGAATTGGAACTATGAATAA+TGG | 0.315352 | 7_4:-14118678 | Msa1141130:CDS |
GATTCTATTTCTGATATTAT+GGG | 0.320241 | 7_4:-14118573 | Msa1141130:CDS |
TTGAAGTCTTCAGCACAAAA+AGG | 0.324880 | 7_4:+14120610 | None:intergenic |
TTCAAGATTTGGAACAAGTT+AGG | 0.332674 | 7_4:-14119061 | Msa1141130:CDS |
GCATTCTTTACTCTTTCTCT+TGG | 0.344272 | 7_4:+14120471 | None:intergenic |
TATACTCAACATAACTTAGA+TGG | 0.353303 | 7_4:-14118483 | Msa1141130:CDS |
CAATGGGGAACCATCTAATA+GGG | 0.355670 | 7_4:-14117758 | Msa1141130:CDS |
GGCTGTTCCAAAGAAAATTC+TGG | 0.359742 | 7_4:-14119581 | Msa1141130:CDS |
GATCTTGTTGAAGCCTTGTT+TGG | 0.371084 | 7_4:-14117579 | Msa1141130:CDS |
ACTTGTGAGGCATAATATTA+GGG | 0.374491 | 7_4:+14118766 | None:intergenic |
GGAGCAGAAATGGTTGGAAT+TGG | 0.379114 | 7_4:-14118693 | Msa1141130:CDS |
GGTTTGGTTCAAGGAGGGTT+TGG | 0.385385 | 7_4:-14118600 | Msa1141130:CDS |
CTGAAGACTTCAAAGATATT+GGG | 0.389220 | 7_4:-14120600 | Msa1141130:CDS |
TGCTATTAACCAAATTGGAT+TGG | 0.390260 | 7_4:-14120371 | Msa1141130:CDS |
CGTTATTGCAGAATTTCATC+TGG | 0.397811 | 7_4:-14121586 | Msa1141130:CDS |
CCTCCCAAAACCCTATTAGA+TGG | 0.398250 | 7_4:+14117748 | None:intergenic |
AACTATGAATAATGGATTAA+GGG | 0.410252 | 7_4:-14118670 | Msa1141130:CDS |
TAGAGGTGAACAAGGATTGA+TGG | 0.418771 | 7_4:-14118892 | Msa1141130:CDS |
GGCCATGATCAAAACAGGTT+TGG | 0.418831 | 7_4:-14118993 | Msa1141130:CDS |
CTGCGTGATGTTGCAGAGAA+AGG | 0.423104 | 7_4:-14119320 | Msa1141130:CDS |
GTGTTGGAAATTGGTTGAAA+TGG | 0.423793 | 7_4:+14119126 | None:intergenic |
AGATATTGGGAAATATGTTA+TGG | 0.426061 | 7_4:-14120587 | Msa1141130:CDS |
GCTGAATAATGGAGCAGAAA+TGG | 0.428747 | 7_4:-14118703 | Msa1141130:CDS |
CAGTGATGTCTGAAGACAAT+AGG | 0.437039 | 7_4:-14120687 | Msa1141130:CDS |
GGTTCAAGGAGGGTTTGGTC+TGG | 0.452214 | 7_4:-14118595 | Msa1141130:CDS |
ATAGTGGCCATGATCAAAAC+AGG | 0.454391 | 7_4:-14118998 | Msa1141130:CDS |
CAAAACAAGACAAGGGAAGA+TGG | 0.456559 | 7_4:-14123745 | Msa1141130:CDS |
AGCGTCTTTGAGATTAAACT+TGG | 0.469430 | 7_4:+14120664 | None:intergenic |
CTTCTTCAAGTTTCTTAACA+AGG | 0.470322 | 7_4:-14118860 | Msa1141130:CDS |
CTTGAATATCTCTCTGTCCT+TGG | 0.475871 | 7_4:+14120449 | None:intergenic |
GAGTCATTTGCTTGAAAACA+TGG | 0.478495 | 7_4:+14118951 | None:intergenic |
AACTTAGATGGAAATGTTGT+GGG | 0.487865 | 7_4:-14118471 | Msa1141130:CDS |
GCGGGATCAATTAATAATGA+AGG | 0.491320 | 7_4:-14118528 | Msa1141130:CDS |
ATGTAGTTGCGAGGAAATGA+AGG | 0.495618 | 7_4:-14117787 | Msa1141130:intron |
TAGTGCTACTTTCACTAATG+AGG | 0.497764 | 7_4:-14118430 | Msa1141130:CDS |
CCTATTAGATGGTTCCCCAT+TGG | 0.510141 | 7_4:+14117759 | None:intergenic |
TAACTTAGATGGAAATGTTG+TGG | 0.515281 | 7_4:-14118472 | Msa1141130:CDS |
TCTGATATTATGGGTGGGAG+TGG | 0.524002 | 7_4:-14118564 | Msa1141130:CDS |
GACATTAGAAACCAGAATCA+TGG | 0.525782 | 7_4:-14118822 | Msa1141130:CDS |
ATTTCTTGCTAATATACTCA+TGG | 0.525942 | 7_4:-14123664 | Msa1141130:CDS |
TAGGCATGGAAAATCAAAGT+TGG | 0.526672 | 7_4:-14119042 | Msa1141130:CDS |
AAAATCTTCATACCTCGTTA+CGG | 0.528212 | 7_4:+14118346 | None:intergenic |
ACTATTCTCCACAACAGCAT+TGG | 0.529555 | 7_4:+14119016 | None:intergenic |
TCTATTTCTGATATTATGGG+TGG | 0.531610 | 7_4:-14118570 | Msa1141130:CDS |
ATTGCAGAATTTCATCTGGT+GGG | 0.533922 | 7_4:-14121582 | Msa1141130:CDS |
TTCTTCAAGTTTCTTAACAA+GGG | 0.536372 | 7_4:-14118859 | Msa1141130:CDS |
ACCACTCTTCAAGAACATGA+AGG | 0.537021 | 7_4:-14121621 | Msa1141130:CDS |
GGCATGTCTCACAGAGCTCT+AGG | 0.548634 | 7_4:-14119287 | Msa1141130:CDS |
CTATTTCTGATATTATGGGT+GGG | 0.552442 | 7_4:-14118569 | Msa1141130:CDS |
TATTGCAGAATTTCATCTGG+TGG | 0.554479 | 7_4:-14121583 | Msa1141130:CDS |
AATAATGGAGCAGAAATGGT+TGG | 0.555811 | 7_4:-14118699 | Msa1141130:CDS |
CATTTGCTTGAAAACATGGA+AGG | 0.562150 | 7_4:+14118955 | None:intergenic |
AATTTGGTTTGGTTCAAGGA+GGG | 0.563542 | 7_4:-14118605 | Msa1141130:CDS |
TCTATATGATGAAAATCTAG+TGG | 0.565614 | 7_4:+14118911 | None:intergenic |
GTTTGCAAATATTGAAGTGT+TGG | 0.565873 | 7_4:+14119188 | None:intergenic |
ATGCCAAATAAACATCATCA+TGG | 0.567811 | 7_4:+14123685 | None:intergenic |
AATGCTGTTGTGGAGAATAG+TGG | 0.567974 | 7_4:-14119014 | Msa1141130:CDS |
ATTTCTCTGATCACAGAACT+CGG | 0.568518 | 7_4:+14119242 | None:intergenic |
GCCTTCATGTTCTTGAAGAG+TGG | 0.572193 | 7_4:+14121620 | None:intergenic |
GTTGCAGAGAAAGGAATGGT+TGG | 0.572817 | 7_4:-14119311 | Msa1141130:CDS |
GTTGGAAGCCAATGCTGTTG+TGG | 0.573882 | 7_4:-14119024 | Msa1141130:CDS |
GCAGAGAAAGGAATGGTTGG+AGG | 0.578705 | 7_4:-14119308 | Msa1141130:CDS |
ACTATGAATAATGGATTAAG+GGG | 0.581064 | 7_4:-14118669 | Msa1141130:CDS |
GATTTGGAACAAGTTAGGCA+TGG | 0.581107 | 7_4:-14119056 | Msa1141130:CDS |
GCAAATGACTCATTTGATGA+TGG | 0.582611 | 7_4:-14118939 | Msa1141130:CDS |
ACTTCAATATTTGCAAACAC+AGG | 0.588080 | 7_4:-14119183 | Msa1141130:CDS |
AAATTTGGTTTGGTTCAAGG+AGG | 0.591953 | 7_4:-14118606 | Msa1141130:CDS |
AGCATGACGAGCATCTTTGG+CGG | 0.594814 | 7_4:+14121647 | None:intergenic |
AATTGGTCAACATGATGTGT+TGG | 0.598362 | 7_4:+14119110 | None:intergenic |
TTGCTAATATACTCATGGCA+TGG | 0.599578 | 7_4:-14123659 | Msa1141130:CDS |
TCATCATATAGAGGTGAACA+AGG | 0.599585 | 7_4:-14118900 | Msa1141130:CDS |
ACTTACTAGATTAGTAGCTG+AGG | 0.606403 | 7_4:+14117705 | None:intergenic |
TTGGTACTATAGAAGACAAG+AGG | 0.611066 | 7_4:-14117560 | Msa1141130:CDS |
AGAAAGAGTAAAGAATGCCA+AGG | 0.613976 | 7_4:-14120466 | Msa1141130:CDS |
AGTGGAAGAGAGTTTCTAGC+GGG | 0.618710 | 7_4:-14118546 | Msa1141130:CDS |
TTATGTGATATGTAGTTGCG+AGG | 0.631887 | 7_4:-14117796 | Msa1141130:intron |
ACACAGGCATATCAAACAAG+AGG | 0.645847 | 7_4:-14119167 | Msa1141130:CDS |
TGGTACTATAGAAGACAAGA+GGG | 0.647456 | 7_4:-14117559 | Msa1141130:CDS |
CTCATGGCATGGCAATACAA+AGG | 0.648754 | 7_4:-14123648 | Msa1141130:intron |
ACATCAGAAGTAAACTTGTG+AGG | 0.669577 | 7_4:+14118753 | None:intergenic |
GTCTTCTATAGTACCAAACA+AGG | 0.672696 | 7_4:+14117566 | None:intergenic |
GTAGATCACAAAACAAGACA+AGG | 0.681990 | 7_4:-14123753 | Msa1141130:CDS |
TGATGTTGCAGAGAAAGGAA+TGG | 0.689031 | 7_4:-14119315 | Msa1141130:CDS |
TAGATCACAAAACAAGACAA+GGG | 0.693712 | 7_4:-14123752 | Msa1141130:CDS |
TGACAAGAATCTCCGTAACG+AGG | 0.706301 | 7_4:-14118358 | Msa1141130:intron |
GAGTGGAAGAGAGTTTCTAG+CGG | 0.748562 | 7_4:-14118547 | Msa1141130:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTAATAGTTAGTTTTTTTT+TGG | + | chr7_4:14118442-14118461 | None:intergenic | 10.0% |
!!! | ATTGAATTTCTAAAATAAAT+GGG | + | chr7_4:14119984-14120003 | None:intergenic | 10.0% |
!!! | AATTGAATTTCTAAAATAAA+TGG | + | chr7_4:14119985-14120004 | None:intergenic | 10.0% |
!! | TAATAAAGTTTAATATAAAG+TGG | - | chr7_4:14120341-14120360 | Msa1141130:intron | 10.0% |
!!! | AAAAATATTTTTCTTATGAA+AGG | - | chr7_4:14120988-14121007 | Msa1141130:intron | 10.0% |
!! | TATTATTAGTATATTTACTT+AGG | + | chr7_4:14121309-14121328 | None:intergenic | 10.0% |
!!! | AAAAATTAAAGTTTTGATTG+TGG | - | chr7_4:14117610-14117629 | Msa1141130:intron | 15.0% |
!!! | GAAGTTTATTTTATTTCTAT+TGG | - | chr7_4:14117735-14117754 | Msa1141130:CDS | 15.0% |
!!! | TTATTTCTATTGGAATTTTA+TGG | - | chr7_4:14117745-14117764 | Msa1141130:CDS | 15.0% |
!! | TATATTAATACATATGTTGT+TGG | + | chr7_4:14118339-14118358 | None:intergenic | 15.0% |
!!! | CTCTTTTTTCTTTTATTTAT+TGG | + | chr7_4:14118683-14118702 | None:intergenic | 15.0% |
!!! | TTATTCACAAAATGTTTTTA+AGG | + | chr7_4:14119514-14119533 | None:intergenic | 15.0% |
!!! | AAATATATTTTTGCATGTTA+CGG | + | chr7_4:14119571-14119590 | None:intergenic | 15.0% |
!!! | ATTGATATTTAATATGCTTT+TGG | + | chr7_4:14119781-14119800 | None:intergenic | 15.0% |
!!! | GTCTATTTTAAATAACTTTT+CGG | + | chr7_4:14120066-14120085 | None:intergenic | 15.0% |
!!! | TCATTAATTCTTTAAAAATG+TGG | - | chr7_4:14120097-14120116 | Msa1141130:intron | 15.0% |
!!! | TATAATTATTTTGTGTCATT+TGG | - | chr7_4:14120138-14120157 | Msa1141130:intron | 15.0% |
!!! | CTTTTAATTTGAGTTAATTA+TGG | - | chr7_4:14121459-14121478 | Msa1141130:intron | 15.0% |
!! | TTAGAGATATTTATTTATCA+AGG | + | chr7_4:14123677-14123696 | None:intergenic | 15.0% |
!! | AATATATTTAAAAACATCCC+AGG | + | chr7_4:14117772-14117791 | None:intergenic | 20.0% |
!! | TTATAATTAATGTGTGTTAG+TGG | - | chr7_4:14117912-14117931 | Msa1141130:intron | 20.0% |
!! | TACAAATAATGTGTTAACAA+AGG | - | chr7_4:14118139-14118158 | Msa1141130:intron | 20.0% |
!!! | ATAAAATCATGCCTTTTTTT+TGG | + | chr7_4:14118291-14118310 | None:intergenic | 20.0% |
!!! | AAAAAAAAGGCATGATTTTA+TGG | - | chr7_4:14118290-14118309 | Msa1141130:intron | 20.0% |
!! | ATAAGATTCAATTCCTTTAT+TGG | + | chr7_4:14118968-14118987 | None:intergenic | 20.0% |
!!! | CAGAAAAAATAATGTCATTT+CGG | - | chr7_4:14119018-14119037 | Msa1141130:CDS | 20.0% |
!!! | AGAAAAAATAATGTCATTTC+GGG | - | chr7_4:14119019-14119038 | Msa1141130:CDS | 20.0% |
!!! | AATATATTTTTGCATGTTAC+GGG | + | chr7_4:14119570-14119589 | None:intergenic | 20.0% |
!! | TGCAAAAATATATTTCATTG+TGG | - | chr7_4:14119576-14119595 | Msa1141130:CDS | 20.0% |
!!! | TATTTTTCATGAAAATCGTA+AGG | + | chr7_4:14120022-14120041 | None:intergenic | 20.0% |
!!! | TTAAAAATGTGGTCAAATTT+TGG | - | chr7_4:14120108-14120127 | Msa1141130:intron | 20.0% |
!!! | ATTTTACAACCATATCAAAT+GGG | - | chr7_4:14121193-14121212 | Msa1141130:intron | 20.0% |
!!! | GATAATAGGTAATTTGTTTT+TGG | + | chr7_4:14121522-14121541 | None:intergenic | 20.0% |
!!! | TACCCTAAAAATTAAGTTTT+TGG | - | chr7_4:14121581-14121600 | Msa1141130:CDS | 20.0% |
!!! | AGCCAAAAACTTAATTTTTA+GGG | + | chr7_4:14121586-14121605 | None:intergenic | 20.0% |
!!! | TTAACAAGGGATTTTAAATT+TGG | - | chr7_4:14122473-14122492 | Msa1141130:intron | 20.0% |
!!! | AACTATGAATAATGGATTAA+GGG | - | chr7_4:14122649-14122668 | Msa1141130:intron | 20.0% |
!!! | TCTTTTGTGAATGAAAAATT+TGG | - | chr7_4:14122698-14122717 | Msa1141130:intron | 20.0% |
!!! | GATTCTATTTCTGATATTAT+GGG | - | chr7_4:14122746-14122765 | Msa1141130:intron | 20.0% |
!! | TTTCACTAGATATATAAATG+TGG | - | chr7_4:14123104-14123123 | Msa1141130:intron | 20.0% |
!! | ATATTAACATAGATAAGTGT+TGG | + | chr7_4:14123288-14123307 | None:intergenic | 20.0% |
!! | ACTTATCTATGTTAATATGA+TGG | - | chr7_4:14123290-14123309 | Msa1141130:intron | 20.0% |
!! | CTTAAAAGAAACTATTAGTT+AGG | + | chr7_4:14123338-14123357 | None:intergenic | 20.0% |
!!! | TAAGCATTTTTGAAGAATTA+GGG | + | chr7_4:14123383-14123402 | None:intergenic | 20.0% |
!!! | ATAAGCATTTTTGAAGAATT+AGG | + | chr7_4:14123384-14123403 | None:intergenic | 20.0% |
!!! | ATTTTACCTAATATTAATGC+AGG | - | chr7_4:14123706-14123725 | Msa1141130:CDS | 20.0% |
! | ATTTCTTGCTAATATACTCA+TGG | - | chr7_4:14117655-14117674 | Msa1141130:intron | 25.0% |
! | AGATTTACAACATATACACA+TGG | + | chr7_4:14117855-14117874 | None:intergenic | 25.0% |
!! | CAACGCATATTGATTATTAT+TGG | + | chr7_4:14117878-14117897 | None:intergenic | 25.0% |
!!! | CTCTTTTGTTTAAAATTCGA+AGG | + | chr7_4:14117991-14118010 | None:intergenic | 25.0% |
!! | CTTCGAATTTTAAACAAAAG+AGG | - | chr7_4:14117989-14118008 | Msa1141130:intron | 25.0% |
! | TGTTGGATGATATGATATAA+GGG | + | chr7_4:14118322-14118341 | None:intergenic | 25.0% |
! | TTGTTGGATGATATGATATA+AGG | + | chr7_4:14118323-14118342 | None:intergenic | 25.0% |
!!! | TTTCATTTCCATTTTTGTAG+CGG | - | chr7_4:14118531-14118550 | Msa1141130:CDS | 25.0% |
! | TTGCCATTAAAAAATCCAAA+GGG | + | chr7_4:14118566-14118585 | None:intergenic | 25.0% |
! | TTTGCCATTAAAAAATCCAA+AGG | + | chr7_4:14118567-14118586 | None:intergenic | 25.0% |
!!! | TTATTTATTGGTGTTGTAGT+TGG | + | chr7_4:14118671-14118690 | None:intergenic | 25.0% |
! | TTCAATTCCTTTATTGGAAT+TGG | + | chr7_4:14118962-14118981 | None:intergenic | 25.0% |
!!! | TGACATTATTTTTTCTGGTA+CGG | + | chr7_4:14119015-14119034 | None:intergenic | 25.0% |
!!! | CGAAATGACATTATTTTTTC+TGG | + | chr7_4:14119020-14119039 | None:intergenic | 25.0% |
!!! | GTGAGACAAAAGTATTTTAT+GGG | + | chr7_4:14119370-14119389 | None:intergenic | 25.0% |
! | GGCTAAAAAAATCCATTAAA+AGG | - | chr7_4:14119414-14119433 | Msa1141130:intron | 25.0% |
! | AAAACAAACTACAAGTGTAT+AGG | + | chr7_4:14119440-14119459 | None:intergenic | 25.0% |
! | TACAAAATCAAATGCATGTA+TGG | + | chr7_4:14119471-14119490 | None:intergenic | 25.0% |
!!! | ATGCATTTGATTTTGTATTC+AGG | - | chr7_4:14119474-14119493 | Msa1141130:intron | 25.0% |
! | AAAGAATTTAACGAGGTATA+AGG | + | chr7_4:14119545-14119564 | None:intergenic | 25.0% |
! | ACTTACTTATTATAGGTATC+TGG | + | chr7_4:14119805-14119824 | None:intergenic | 25.0% |
!!! | TGCAATTGTTTTTCTTTGTA+TGG | - | chr7_4:14119853-14119872 | Msa1141130:intron | 25.0% |
!!! | TTGTTTTTCTTTGTATGGAT+AGG | - | chr7_4:14119858-14119877 | Msa1141130:intron | 25.0% |
!! | TGTTTTTCTTTGTATGGATA+GGG | - | chr7_4:14119859-14119878 | Msa1141130:intron | 25.0% |
! | TTATTATGCAAACATGCTTA+AGG | - | chr7_4:14119908-14119927 | Msa1141130:intron | 25.0% |
!! | TGTCATTTGGATAGATAATT+TGG | - | chr7_4:14120151-14120170 | Msa1141130:intron | 25.0% |
!!! | AGACATTATTTGTGTCATTT+TGG | - | chr7_4:14120252-14120271 | Msa1141130:intron | 25.0% |
! | AAGAAGCTTAAAGAACTATA+TGG | + | chr7_4:14120491-14120510 | None:intergenic | 25.0% |
! | AGATATTGGGAAATATGTTA+TGG | - | chr7_4:14120732-14120751 | Msa1141130:intron | 25.0% |
!! | TTAAGAAACAAAAGCTTGTT+TGG | - | chr7_4:14120896-14120915 | Msa1141130:intron | 25.0% |
!! | CATTTTACAACCATATCAAA+TGG | - | chr7_4:14121192-14121211 | Msa1141130:intron | 25.0% |
!! | GAGCCAAAAACTTAATTTTT+AGG | + | chr7_4:14121587-14121606 | None:intergenic | 25.0% |
!! | TTATATTTTCCCTAATTCAG+AGG | - | chr7_4:14121717-14121736 | Msa1141130:intron | 25.0% |
! | AATTCCCTTACATACAAAAA+GGG | - | chr7_4:14122228-14122247 | Msa1141130:intron | 25.0% |
! | TCTATATGATGAAAATCTAG+TGG | + | chr7_4:14122411-14122430 | None:intergenic | 25.0% |
!! | ACTAGATTTTCATCATATAG+AGG | - | chr7_4:14122410-14122429 | Msa1141130:intron | 25.0% |
!! | TTCTTCAAGTTTCTTAACAA+GGG | - | chr7_4:14122460-14122479 | Msa1141130:intron | 25.0% |
!! | AATTTTTAACACCATGATTC+TGG | + | chr7_4:14122511-14122530 | None:intergenic | 25.0% |
! | GGTGTTAAAAATTCTAACTT+TGG | - | chr7_4:14122518-14122537 | Msa1141130:intron | 25.0% |
! | AAATTCTAACTTTGGATCTT+TGG | - | chr7_4:14122526-14122545 | Msa1141130:intron | 25.0% |
!! | GTAAGAAACAATAACCATTT+TGG | - | chr7_4:14122587-14122606 | Msa1141130:intron | 25.0% |
!!! | GAACTATGAATAATGGATTA+AGG | - | chr7_4:14122648-14122667 | Msa1141130:intron | 25.0% |
!!! | ACTATGAATAATGGATTAAG+GGG | - | chr7_4:14122650-14122669 | Msa1141130:intron | 25.0% |
! | TGTGAATGAAAAATTTGGTT+TGG | - | chr7_4:14122703-14122722 | Msa1141130:intron | 25.0% |
!!! | GGATTCTATTTCTGATATTA+TGG | - | chr7_4:14122745-14122764 | Msa1141130:intron | 25.0% |
! | TATACTCAACATAACTTAGA+TGG | - | chr7_4:14122836-14122855 | Msa1141130:intron | 25.0% |
! | CAACAATTCTGATTACTTAA+TGG | - | chr7_4:14122934-14122953 | Msa1141130:intron | 25.0% |
!!! | GAGTTTTTGTTTGAACTTAT+TGG | + | chr7_4:14123182-14123201 | None:intergenic | 25.0% |
! | TGGTTTAACATAGATACATA+GGG | + | chr7_4:14123268-14123287 | None:intergenic | 25.0% |
! | TTGGTTTAACATAGATACAT+AGG | + | chr7_4:14123269-14123288 | None:intergenic | 25.0% |
! | TATGATGGTCATAATGTAAT+TGG | - | chr7_4:14123305-14123324 | Msa1141130:intron | 25.0% |
! | CAAATTCCTGCATTAATATT+AGG | + | chr7_4:14123715-14123734 | None:intergenic | 25.0% |
! | ATTAATGCAGGAATTTGATA+TGG | - | chr7_4:14123718-14123737 | Msa1141130:CDS | 25.0% |
TAGATCACAAAACAAGACAA+GGG | - | chr7_4:14117567-14117586 | Msa1141130:CDS | 30.0% | |
ATGCCAAATAAACATCATCA+TGG | + | chr7_4:14117637-14117656 | None:intergenic | 30.0% | |
! | TATTGGAATTTTATGGACCT+GGG | - | chr7_4:14117752-14117771 | Msa1141130:CDS | 30.0% |
! | AGACTTTATTTACCTATCAG+CGG | + | chr7_4:14118047-14118066 | None:intergenic | 30.0% |
! | ATTCAAACTCAAGTTGTAAC+AGG | - | chr7_4:14118090-14118109 | Msa1141130:intron | 30.0% |
TACTACCAAAGTGAATAAGT+GGG | + | chr7_4:14118248-14118267 | None:intergenic | 30.0% | |
TTACTACCAAAGTGAATAAG+TGG | + | chr7_4:14118249-14118268 | None:intergenic | 30.0% | |
CTACTTGACAACCAAAAAAA+AGG | - | chr7_4:14118277-14118296 | Msa1141130:intron | 30.0% | |
GTTGGATGATATGATATAAG+GGG | + | chr7_4:14118321-14118340 | None:intergenic | 30.0% | |
! | ATTCTCTGTTGTTCTTTTTC+GGG | + | chr7_4:14118630-14118649 | None:intergenic | 30.0% |
! | GATTCTCTGTTGTTCTTTTT+CGG | + | chr7_4:14118631-14118650 | None:intergenic | 30.0% |
! | ACTACTGTTCTTTTTATGTG+TGG | + | chr7_4:14118920-14118939 | None:intergenic | 30.0% |
TAAAAAGAACAGTAGTGTGA+AGG | - | chr7_4:14118924-14118943 | Msa1141130:CDS | 30.0% | |
AAAAAGAACAGTAGTGTGAA+GGG | - | chr7_4:14118925-14118944 | Msa1141130:CDS | 30.0% | |
CAAAGAACCAATTCCAATAA+AGG | - | chr7_4:14118952-14118971 | Msa1141130:CDS | 30.0% | |
TGCTAGGATTTACTATACTT+TGG | + | chr7_4:14119073-14119092 | None:intergenic | 30.0% | |
!! | TTAAAGAGATTTTGACGAGT+TGG | - | chr7_4:14119302-14119321 | Msa1141130:CDS | 30.0% |
!! | TAAAGAGATTTTGACGAGTT+GGG | - | chr7_4:14119303-14119322 | Msa1141130:CDS | 30.0% |
!!! | GGTGAGACAAAAGTATTTTA+TGG | + | chr7_4:14119371-14119390 | None:intergenic | 30.0% |
! | AGAGTGGAATATTTTCTTGA+TGG | + | chr7_4:14119392-14119411 | None:intergenic | 30.0% |
CAAGAAAATATTCCACTCTT+TGG | - | chr7_4:14119393-14119412 | Msa1141130:intron | 30.0% | |
CAAATGCATGTATGGTATAA+AGG | + | chr7_4:14119463-14119482 | None:intergenic | 30.0% | |
GTGACACACTTACTTATTAT+AGG | + | chr7_4:14119812-14119831 | None:intergenic | 30.0% | |
TTTAGTGCACCTATCAATTT+AGG | + | chr7_4:14119943-14119962 | None:intergenic | 30.0% | |
GGTCAAACTTAAAATTACTG+AGG | + | chr7_4:14120045-14120064 | None:intergenic | 30.0% | |
ATAATGCACAAGAACTAAAG+TGG | + | chr7_4:14120571-14120590 | None:intergenic | 30.0% | |
CTGAAGACTTCAAAGATATT+GGG | - | chr7_4:14120719-14120738 | Msa1141130:intron | 30.0% | |
! | GAATGCTTCTTTTTGTTCTT+AGG | + | chr7_4:14120829-14120848 | None:intergenic | 30.0% |
! | AGAAACATTTTGTGGAGATA+AGG | + | chr7_4:14120925-14120944 | None:intergenic | 30.0% |
TGCTATTAACCAAATTGGAT+TGG | - | chr7_4:14120948-14120967 | Msa1141130:intron | 30.0% | |
ACTTACTTTCCAATCCAATT+TGG | + | chr7_4:14120960-14120979 | None:intergenic | 30.0% | |
TACTTCTTCCAACCATAAAT+CGG | - | chr7_4:14121055-14121074 | Msa1141130:intron | 30.0% | |
!!! | ATTTTTTGACGCATTGATAG+CGG | + | chr7_4:14121135-14121154 | None:intergenic | 30.0% |
! | AGTTTAACTTTGTAACCTCA+AGG | + | chr7_4:14121233-14121252 | None:intergenic | 30.0% |
! | ACTACAATGTGTTTTTCTTG+TGG | - | chr7_4:14121694-14121713 | Msa1141130:intron | 30.0% |
! | ATGATCTCCAGAATTTTCTT+TGG | + | chr7_4:14121748-14121767 | None:intergenic | 30.0% |
GTTTGCAAATATTGAAGTGT+TGG | + | chr7_4:14122134-14122153 | None:intergenic | 30.0% | |
ACTTCAATATTTGCAAACAC+AGG | - | chr7_4:14122136-14122155 | Msa1141130:intron | 30.0% | |
! | CTTTTTGTATGTAAGGGAAT+TGG | + | chr7_4:14122229-14122248 | None:intergenic | 30.0% |
CAATTCCCTTACATACAAAA+AGG | - | chr7_4:14122227-14122246 | Msa1141130:intron | 30.0% | |
! | TTCAAGATTTGGAACAAGTT+AGG | - | chr7_4:14122258-14122277 | Msa1141130:intron | 30.0% |
! | CTTCTTCAAGTTTCTTAACA+AGG | - | chr7_4:14122459-14122478 | Msa1141130:intron | 30.0% |
ACTTGTGAGGCATAATATTA+GGG | + | chr7_4:14122556-14122575 | None:intergenic | 30.0% | |
AACTTGTGAGGCATAATATT+AGG | + | chr7_4:14122557-14122576 | None:intergenic | 30.0% | |
TATTCAGCTGAATTCCAAAA+TGG | + | chr7_4:14122604-14122623 | None:intergenic | 30.0% | |
! | TTTGGAATTCAGCTGAATAA+TGG | - | chr7_4:14122605-14122624 | Msa1141130:intron | 30.0% |
GGAATTGGAACTATGAATAA+TGG | - | chr7_4:14122641-14122660 | Msa1141130:intron | 30.0% | |
!! | GAAAAATTTGGTTTGGTTCA+AGG | - | chr7_4:14122710-14122729 | Msa1141130:intron | 30.0% |
!! | TCTATTTCTGATATTATGGG+TGG | - | chr7_4:14122749-14122768 | Msa1141130:intron | 30.0% |
!! | CTATTTCTGATATTATGGGT+GGG | - | chr7_4:14122750-14122769 | Msa1141130:intron | 30.0% |
TAACTTAGATGGAAATGTTG+TGG | - | chr7_4:14122847-14122866 | Msa1141130:intron | 30.0% | |
AACTTAGATGGAAATGTTGT+GGG | - | chr7_4:14122848-14122867 | Msa1141130:intron | 30.0% | |
AAAATCTTCATACCTCGTTA+CGG | + | chr7_4:14122976-14122995 | None:intergenic | 30.0% | |
AAGTTCAAACAAAAACTCAC+AGG | - | chr7_4:14123184-14123203 | Msa1141130:intron | 30.0% | |
TAACATAGATACATAGGGAA+AGG | + | chr7_4:14123263-14123282 | None:intergenic | 30.0% | |
AAACCTCAGAAACATTCTAT+TGG | + | chr7_4:14123500-14123519 | None:intergenic | 30.0% | |
! | GAAATGAAGGATTTTCCAAT+GGG | - | chr7_4:14123545-14123564 | Msa1141130:intron | 30.0% |
! | AAATGAAGGATTTTCCAATG+GGG | - | chr7_4:14123546-14123565 | Msa1141130:intron | 30.0% |
GTAGATCACAAAACAAGACA+AGG | - | chr7_4:14117566-14117585 | Msa1141130:CDS | 35.0% | |
! | GGACCATGATGATGTTTATT+TGG | - | chr7_4:14117631-14117650 | Msa1141130:intron | 35.0% |
TTGCTAATATACTCATGGCA+TGG | - | chr7_4:14117660-14117679 | Msa1141130:intron | 35.0% | |
! | CTATTGGAATTTTATGGACC+TGG | - | chr7_4:14117751-14117770 | Msa1141130:CDS | 35.0% |
!! | ATATTCTAAGATCCGCTGAT+AGG | - | chr7_4:14118032-14118051 | Msa1141130:intron | 35.0% |
ACTACCAAAGTGAATAAGTG+GGG | + | chr7_4:14118247-14118266 | None:intergenic | 35.0% | |
!!! | CGACCCTTTGGATTTTTTAA+TGG | - | chr7_4:14118560-14118579 | Msa1141130:CDS | 35.0% |
TTCAGGTGTTTGTCTAACTT+GGG | + | chr7_4:14118799-14118818 | None:intergenic | 35.0% | |
! | TTTCAGGTGTTTGTCTAACT+TGG | + | chr7_4:14118800-14118819 | None:intergenic | 35.0% |
GTTAGACAAACACCTGAAAT+CGG | - | chr7_4:14118801-14118820 | Msa1141130:CDS | 35.0% | |
TTAGACAAACACCTGAAATC+GGG | - | chr7_4:14118802-14118821 | Msa1141130:CDS | 35.0% | |
! | TTCTTTTTATGTGTGGAAGG+TGG | + | chr7_4:14118913-14118932 | None:intergenic | 35.0% |
! | CTGTTCTTTTTATGTGTGGA+AGG | + | chr7_4:14118916-14118935 | None:intergenic | 35.0% |
AACCAGAATATCAACCTCAA+GGG | - | chr7_4:14118989-14119008 | Msa1141130:CDS | 35.0% | |
AGTAGACATAGTGATATGCT+AGG | + | chr7_4:14119089-14119108 | None:intergenic | 35.0% | |
ATCTTCAGGAATTGCTTCAT+GGG | + | chr7_4:14119127-14119146 | None:intergenic | 35.0% | |
AATCTTCAGGAATTGCTTCA+TGG | + | chr7_4:14119128-14119147 | None:intergenic | 35.0% | |
ATGTTTGGTATCGTGTTTGT+AGG | + | chr7_4:14119181-14119200 | None:intergenic | 35.0% | |
ACAAACACGATACCAAACAT+CGG | - | chr7_4:14119181-14119200 | Msa1141130:CDS | 35.0% | |
! | TCATCTGTTTGTCACTTGTA+GGG | + | chr7_4:14119213-14119232 | None:intergenic | 35.0% |
! | ATCATCTGTTTGTCACTTGT+AGG | + | chr7_4:14119214-14119233 | None:intergenic | 35.0% |
TCAAAATCTCTTTAAGCGCA+GGG | + | chr7_4:14119297-14119316 | None:intergenic | 35.0% | |
!! | AAAGAGATTTTGACGAGTTG+GGG | - | chr7_4:14119304-14119323 | Msa1141130:CDS | 35.0% |
!!! | GGATTTTTTTAGCCAAAGAG+TGG | + | chr7_4:14119408-14119427 | None:intergenic | 35.0% |
! | CAAGTGTATAGGCCTTTTAA+TGG | + | chr7_4:14119429-14119448 | None:intergenic | 35.0% |
ACGGGAAAAAGAATTTAACG+AGG | + | chr7_4:14119552-14119571 | None:intergenic | 35.0% | |
CGTTATTGCAGAATTTCATC+TGG | - | chr7_4:14119733-14119752 | Msa1141130:intron | 35.0% | |
TATTGCAGAATTTCATCTGG+TGG | - | chr7_4:14119736-14119755 | Msa1141130:intron | 35.0% | |
ATTGCAGAATTTCATCTGGT+GGG | - | chr7_4:14119737-14119756 | Msa1141130:intron | 35.0% | |
TGCAAACATGCTTAAGGATT+TGG | - | chr7_4:14119914-14119933 | Msa1141130:intron | 35.0% | |
GCAAACATGCTTAAGGATTT+GGG | - | chr7_4:14119915-14119934 | Msa1141130:intron | 35.0% | |
ATTTGGGCTCCTAAATTGAT+AGG | - | chr7_4:14119931-14119950 | Msa1141130:intron | 35.0% | |
! | AAAGTACTTGTGAGAGCTTA+TGG | + | chr7_4:14120438-14120457 | None:intergenic | 35.0% |
!! | AGCGTCTTTGAGATTAAACT+TGG | + | chr7_4:14120658-14120677 | None:intergenic | 35.0% |
ATCTCAAAGACGCTAGAAAA+TGG | - | chr7_4:14120664-14120683 | Msa1141130:CDS | 35.0% | |
TTGAAGTCTTCAGCACAAAA+AGG | + | chr7_4:14120712-14120731 | None:intergenic | 35.0% | |
GCTGAAGACTTCAAAGATAT+TGG | - | chr7_4:14120718-14120737 | Msa1141130:intron | 35.0% | |
GCATTCTTTACTCTTTCTCT+TGG | + | chr7_4:14120851-14120870 | None:intergenic | 35.0% | |
AGAAAGAGTAAAGAATGCCA+AGG | - | chr7_4:14120853-14120872 | Msa1141130:intron | 35.0% | |
! | TAGCAAGCAGAAACATTTTG+TGG | + | chr7_4:14120933-14120952 | None:intergenic | 35.0% |
!! | CTGCTTGCTATTAACCAAAT+TGG | - | chr7_4:14120943-14120962 | Msa1141130:intron | 35.0% |
TAGACAATACCGTGGAAAAA+TGG | + | chr7_4:14121086-14121105 | None:intergenic | 35.0% | |
ATTCAAAGTAGACAATACCG+TGG | + | chr7_4:14121094-14121113 | None:intergenic | 35.0% | |
TTTCAATGTACACACCACTA+TGG | - | chr7_4:14121168-14121187 | Msa1141130:intron | 35.0% | |
TGGTTGTAAAATGACCATAG+TGG | + | chr7_4:14121185-14121204 | None:intergenic | 35.0% | |
ACCCCACTATCATTGTTTAT+AGG | - | chr7_4:14121283-14121302 | Msa1141130:intron | 35.0% | |
! | GCCTATAAACAATGATAGTG+GGG | + | chr7_4:14121287-14121306 | None:intergenic | 35.0% |
GGCCTATAAACAATGATAGT+GGG | + | chr7_4:14121288-14121307 | None:intergenic | 35.0% | |
AGGCCTATAAACAATGATAG+TGG | + | chr7_4:14121289-14121308 | None:intergenic | 35.0% | |
! | ACATTTTCTCTGGTCAAGTT+TGG | + | chr7_4:14121778-14121797 | None:intergenic | 35.0% |
AAATGTAGCAAGTCACTTAC+AGG | - | chr7_4:14121792-14121811 | Msa1141130:intron | 35.0% | |
ATTTCTCTGATCACAGAACT+CGG | + | chr7_4:14122080-14122099 | None:intergenic | 35.0% | |
GTGTTGGAAATTGGTTGAAA+TGG | + | chr7_4:14122196-14122215 | None:intergenic | 35.0% | |
CAACATGATGTGTTGGAAAT+TGG | + | chr7_4:14122205-14122224 | None:intergenic | 35.0% | |
AATTGGTCAACATGATGTGT+TGG | + | chr7_4:14122212-14122231 | None:intergenic | 35.0% | |
! | CCAACCCTTTTTGTATGTAA+GGG | + | chr7_4:14122235-14122254 | None:intergenic | 35.0% |
TAGGCATGGAAAATCAAAGT+TGG | - | chr7_4:14122277-14122296 | Msa1141130:intron | 35.0% | |
!!! | TTCCAAACCTGTTTTGATCA+TGG | + | chr7_4:14122331-14122350 | None:intergenic | 35.0% |
CATTTGCTTGAAAACATGGA+AGG | + | chr7_4:14122367-14122386 | None:intergenic | 35.0% | |
GAGTCATTTGCTTGAAAACA+TGG | + | chr7_4:14122371-14122390 | None:intergenic | 35.0% | |
GCAAATGACTCATTTGATGA+TGG | - | chr7_4:14122380-14122399 | Msa1141130:intron | 35.0% | |
TCATCATATAGAGGTGAACA+AGG | - | chr7_4:14122419-14122438 | Msa1141130:intron | 35.0% | |
GACATTAGAAACCAGAATCA+TGG | - | chr7_4:14122497-14122516 | Msa1141130:intron | 35.0% | |
ACATCAGAAGTAAACTTGTG+AGG | + | chr7_4:14122569-14122588 | None:intergenic | 35.0% | |
! | AATAATGGAGCAGAAATGGT+TGG | - | chr7_4:14122620-14122639 | Msa1141130:intron | 35.0% |
!! | AAATTTGGTTTGGTTCAAGG+AGG | - | chr7_4:14122713-14122732 | Msa1141130:intron | 35.0% |
!! | AATTTGGTTTGGTTCAAGGA+GGG | - | chr7_4:14122714-14122733 | Msa1141130:intron | 35.0% |
GCGGGATCAATTAATAATGA+AGG | - | chr7_4:14122791-14122810 | Msa1141130:intron | 35.0% | |
!! | TAGTGCTACTTTCACTAATG+AGG | - | chr7_4:14122889-14122908 | Msa1141130:intron | 35.0% |
TGGTCATAATGTAATTGGAG+AGG | - | chr7_4:14123310-14123329 | Msa1141130:intron | 35.0% | |
! | GAACCAATAGAATGTTTCTG+AGG | - | chr7_4:14123494-14123513 | Msa1141130:intron | 35.0% |
TTATGTGATATGTAGTTGCG+AGG | - | chr7_4:14123523-14123542 | Msa1141130:intron | 35.0% | |
! | GGAAATGAAGGATTTTCCAA+TGG | - | chr7_4:14123544-14123563 | Msa1141130:intron | 35.0% |
! | GAACCATCTAATAGGGTTTT+GGG | - | chr7_4:14123568-14123587 | Msa1141130:intron | 35.0% |
ACTTACTAGATTAGTAGCTG+AGG | + | chr7_4:14123617-14123636 | None:intergenic | 35.0% | |
GTCTTCTATAGTACCAAACA+AGG | + | chr7_4:14123756-14123775 | None:intergenic | 35.0% | |
TTGGTACTATAGAAGACAAG+AGG | - | chr7_4:14123759-14123778 | Msa1141130:CDS | 35.0% | |
TGGTACTATAGAAGACAAGA+GGG | - | chr7_4:14123760-14123779 | Msa1141130:CDS | 35.0% | |
CAAAACAAGACAAGGGAAGA+TGG | - | chr7_4:14117574-14117593 | Msa1141130:CDS | 40.0% | |
GACATGCATTGTCATATGCA+GGG | - | chr7_4:14118199-14118218 | Msa1141130:intron | 40.0% | |
ACATGCATTGTCATATGCAG+GGG | - | chr7_4:14118200-14118219 | Msa1141130:intron | 40.0% | |
!! | TTCCATTTTTGTAGCGGTTG+AGG | - | chr7_4:14118537-14118556 | Msa1141130:CDS | 40.0% |
! | GTTGGTCTGCTTCTTATTTC+TGG | + | chr7_4:14118653-14118672 | None:intergenic | 40.0% |
TTGGGAGTTTGTCTATACTC+GGG | + | chr7_4:14118716-14118735 | None:intergenic | 40.0% | |
CTTGGGAGTTTGTCTATACT+CGG | + | chr7_4:14118717-14118736 | None:intergenic | 40.0% | |
!! | CAGAAGTGTTCAGATTGTTG+GGG | + | chr7_4:14118870-14118889 | None:intergenic | 40.0% |
!! | CCAGAAGTGTTCAGATTGTT+GGG | + | chr7_4:14118871-14118890 | None:intergenic | 40.0% |
AGGTGGAGTCAATTCTTTGT+TGG | + | chr7_4:14118896-14118915 | None:intergenic | 40.0% | |
CAACCAGAATATCAACCTCA+AGG | - | chr7_4:14118988-14119007 | Msa1141130:CDS | 40.0% | |
TACTTTGGCATGAAACTGTG+AGG | + | chr7_4:14119058-14119077 | None:intergenic | 40.0% | |
!! | CTTCATGGGTTAGTGTCTTT+AGG | + | chr7_4:14119113-14119132 | None:intergenic | 40.0% |
AGCAATTCCTGAAGATTCCT+AGG | - | chr7_4:14119131-14119150 | Msa1141130:CDS | 40.0% | |
ATCGTGTTTGTAGGTGGTTA+GGG | + | chr7_4:14119172-14119191 | None:intergenic | 40.0% | |
TATCGTGTTTGTAGGTGGTT+AGG | + | chr7_4:14119173-14119192 | None:intergenic | 40.0% | |
TTTGGTATCGTGTTTGTAGG+TGG | + | chr7_4:14119178-14119197 | None:intergenic | 40.0% | |
GTCAAAATCTCTTTAAGCGC+AGG | + | chr7_4:14119298-14119317 | None:intergenic | 40.0% | |
ACCACTCTTCAAGAACATGA+AGG | - | chr7_4:14119698-14119717 | Msa1141130:intron | 40.0% | |
TGCACAAGAACTAAAGTGGT+GGG | + | chr7_4:14120567-14120586 | None:intergenic | 40.0% | |
ATGCACAAGAACTAAAGTGG+TGG | + | chr7_4:14120568-14120587 | None:intergenic | 40.0% | |
CAGTGATGTCTGAAGACAAT+AGG | - | chr7_4:14120632-14120651 | Msa1141130:CDS | 40.0% | |
CTTGAATATCTCTCTGTCCT+TGG | + | chr7_4:14120873-14120892 | None:intergenic | 40.0% | |
! | AAAATGGTGCAGCCGATTTA+TGG | + | chr7_4:14121070-14121089 | None:intergenic | 40.0% |
AGTGCAGATCCCATTTGATA+TGG | + | chr7_4:14121205-14121224 | None:intergenic | 40.0% | |
GTATCCTCTTCAAACTCAAG+TGG | - | chr7_4:14121415-14121434 | Msa1141130:intron | 40.0% | |
ACATCCACTTGAGTTTGAAG+AGG | + | chr7_4:14121422-14121441 | None:intergenic | 40.0% | |
TTGGAACAGCCTCTGAATTA+GGG | + | chr7_4:14121729-14121748 | None:intergenic | 40.0% | |
! | TTTGGAACAGCCTCTGAATT+AGG | + | chr7_4:14121730-14121749 | None:intergenic | 40.0% |
GGCTGTTCCAAAGAAAATTC+TGG | - | chr7_4:14121738-14121757 | Msa1141130:intron | 40.0% | |
!!! | GTGACTTGCTACATTTTCTC+TGG | + | chr7_4:14121788-14121807 | None:intergenic | 40.0% |
TGATGTTGCAGAGAAAGGAA+TGG | - | chr7_4:14122004-14122023 | Msa1141130:intron | 40.0% | |
ACACAGGCATATCAAACAAG+AGG | - | chr7_4:14122152-14122171 | Msa1141130:intron | 40.0% | |
CCCTTACATACAAAAAGGGT+TGG | - | chr7_4:14122232-14122251 | Msa1141130:intron | 40.0% | |
! | GCCAACCCTTTTTGTATGTA+AGG | + | chr7_4:14122236-14122255 | None:intergenic | 40.0% |
! | GATTTGGAACAAGTTAGGCA+TGG | - | chr7_4:14122263-14122282 | Msa1141130:intron | 40.0% |
ACTATTCTCCACAACAGCAT+TGG | + | chr7_4:14122306-14122325 | None:intergenic | 40.0% | |
AATGCTGTTGTGGAGAATAG+TGG | - | chr7_4:14122305-14122324 | Msa1141130:intron | 40.0% | |
ATAGTGGCCATGATCAAAAC+AGG | - | chr7_4:14122321-14122340 | Msa1141130:intron | 40.0% | |
TAGAGGTGAACAAGGATTGA+TGG | - | chr7_4:14122427-14122446 | Msa1141130:intron | 40.0% | |
! | GCTGAATAATGGAGCAGAAA+TGG | - | chr7_4:14122616-14122635 | Msa1141130:intron | 40.0% |
!!! | CACGATGCGATTTTAACTTG+AGG | + | chr7_4:14123143-14123162 | None:intergenic | 40.0% |
! | CTCATCCAAGTTTGCTCTTA+AGG | - | chr7_4:14123472-14123491 | Msa1141130:intron | 40.0% |
TGGTTCCTTAAGAGCAAACT+TGG | + | chr7_4:14123480-14123499 | None:intergenic | 40.0% | |
ATGTAGTTGCGAGGAAATGA+AGG | - | chr7_4:14123532-14123551 | Msa1141130:intron | 40.0% | |
CAATGGGGAACCATCTAATA+GGG | - | chr7_4:14123561-14123580 | Msa1141130:intron | 40.0% | |
! | GGAACCATCTAATAGGGTTT+TGG | - | chr7_4:14123567-14123586 | Msa1141130:intron | 40.0% |
!! | GATCTTGTTGAAGCCTTGTT+TGG | - | chr7_4:14123740-14123759 | Msa1141130:CDS | 40.0% |
CTCATGGCATGGCAATACAA+AGG | - | chr7_4:14117671-14117690 | Msa1141130:intron | 45.0% | |
GGACATGCATTGTCATATGC+AGG | - | chr7_4:14118198-14118217 | Msa1141130:intron | 45.0% | |
! | AAGTGAATAAGTGGGGTGTC+CGG | + | chr7_4:14118240-14118259 | None:intergenic | 45.0% |
GACACCCCACTTATTCACTT+TGG | - | chr7_4:14118240-14118259 | Msa1141130:intron | 45.0% | |
!!! | TTCTTTTTCGGGTGGTTGCA+TGG | + | chr7_4:14118619-14118638 | None:intergenic | 45.0% |
!!! | CTCTGTTGTTCTTTTTCGGG+TGG | + | chr7_4:14118627-14118646 | None:intergenic | 45.0% |
! | CTTTGGTTGTAGTCTTGGGA+GGG | + | chr7_4:14118753-14118772 | None:intergenic | 45.0% |
! | TCTTTGGTTGTAGTCTTGGG+AGG | + | chr7_4:14118754-14118773 | None:intergenic | 45.0% |
TCCCAAGACTACAACCAAAG+AGG | - | chr7_4:14118753-14118772 | Msa1141130:CDS | 45.0% | |
GCCTCTTTGGTTGTAGTCTT+GGG | + | chr7_4:14118757-14118776 | None:intergenic | 45.0% | |
TGCCTCTTTGGTTGTAGTCT+TGG | + | chr7_4:14118758-14118777 | None:intergenic | 45.0% | |
TTCGTTCTCTACTGCCTCTT+TGG | + | chr7_4:14118770-14118789 | None:intergenic | 45.0% | |
AAAGAGGCAGTAGAGAACGA+AGG | - | chr7_4:14118769-14118788 | Msa1141130:CDS | 45.0% | |
AGGTGTTTGTCTAACTTGGG+TGG | + | chr7_4:14118796-14118815 | None:intergenic | 45.0% | |
CTGGATCTGATATGCGCTTT+GGG | + | chr7_4:14118842-14118861 | None:intergenic | 45.0% | |
CCCAACAATCTGAACACTTC+TGG | - | chr7_4:14118868-14118887 | Msa1141130:CDS | 45.0% | |
!! | GCCAGAAGTGTTCAGATTGT+TGG | + | chr7_4:14118872-14118891 | None:intergenic | 45.0% |
! | TAATGTCATTTCGGGCCTTC+CGG | - | chr7_4:14119027-14119046 | Msa1141130:CDS | 45.0% |
ATGAAACTGTGAGGTCCATC+CGG | + | chr7_4:14119049-14119068 | None:intergenic | 45.0% | |
GGTTTCACCTAGGAATCTTC+AGG | + | chr7_4:14119141-14119160 | None:intergenic | 45.0% | |
TGTTTGTAGGTGGTTAGGGT+GGG | + | chr7_4:14119168-14119187 | None:intergenic | 45.0% | |
! | TCTGTTTGTCACTTGTAGGG+TGG | + | chr7_4:14119210-14119229 | None:intergenic | 45.0% |
! | TGAGGAGAGTGTGGAAATAG+TGG | + | chr7_4:14119237-14119256 | None:intergenic | 45.0% |
CCTGCAGCTTATCCTTGATA+GGG | + | chr7_4:14119330-14119349 | None:intergenic | 45.0% | |
CAAAGCATGACGAGCATCTT+TGG | + | chr7_4:14119678-14119697 | None:intergenic | 45.0% | |
GCCTTCATGTTCTTGAAGAG+TGG | + | chr7_4:14119702-14119721 | None:intergenic | 45.0% | |
GATCTGCACTTCTTACCTTG+AGG | - | chr7_4:14121215-14121234 | Msa1141130:intron | 45.0% | |
TGCACTAGGTGCTAGTTAAC+TGG | + | chr7_4:14121260-14121279 | None:intergenic | 45.0% | |
GTTGCAGAGAAAGGAATGGT+TGG | - | chr7_4:14122008-14122027 | Msa1141130:intron | 45.0% | |
!! | AGGGTTGGCTCTTCAAGATT+TGG | - | chr7_4:14122247-14122266 | Msa1141130:intron | 45.0% |
GGCCATGATCAAAACAGGTT+TGG | - | chr7_4:14122326-14122345 | Msa1141130:intron | 45.0% | |
GGAGCAGAAATGGTTGGAAT+TGG | - | chr7_4:14122626-14122645 | Msa1141130:intron | 45.0% | |
TCTGATATTATGGGTGGGAG+TGG | - | chr7_4:14122755-14122774 | Msa1141130:intron | 45.0% | |
! | GAGTGGAAGAGAGTTTCTAG+CGG | - | chr7_4:14122772-14122791 | Msa1141130:intron | 45.0% |
!! | AGTGGAAGAGAGTTTCTAGC+GGG | - | chr7_4:14122773-14122792 | Msa1141130:intron | 45.0% |
TGACAAGAATCTCCGTAACG+AGG | - | chr7_4:14122961-14122980 | Msa1141130:intron | 45.0% | |
AACTCACAGGCAAGTCTCAT+TGG | - | chr7_4:14123197-14123216 | Msa1141130:intron | 45.0% | |
CCTATTAGATGGTTCCCCAT+TGG | + | chr7_4:14123563-14123582 | None:intergenic | 45.0% | |
CCAATGGGGAACCATCTAAT+AGG | - | chr7_4:14123560-14123579 | Msa1141130:intron | 45.0% | |
CCTCCCAAAACCCTATTAGA+TGG | + | chr7_4:14123574-14123593 | None:intergenic | 45.0% | |
!!! | CCATCTAATAGGGTTTTGGG+AGG | - | chr7_4:14123571-14123590 | Msa1141130:intron | 45.0% |
!! | ATTATTTAATTAATATTATG+TGG | - | chr7_4:14117710-14117729 | Msa1141130:intron | 5.0% |
!!! | TATTTTGATAAATAATTTAA+AGG | - | chr7_4:14120285-14120304 | Msa1141130:intron | 5.0% |
!!! | ATTTTGATAAATAATTTAAA+GGG | - | chr7_4:14120286-14120305 | Msa1141130:intron | 5.0% |
! | AAAGGCATGATTTGTCCCCG+TGG | - | chr7_4:14118157-14118176 | Msa1141130:intron | 50.0% |
! | AAGGCATGATTTGTCCCCGT+GGG | - | chr7_4:14118158-14118177 | Msa1141130:intron | 50.0% |
TGCCAACTGAGTTATGCCCA+CGG | + | chr7_4:14118177-14118196 | None:intergenic | 50.0% | |
TGGGCATAACTCAGTTGGCA+AGG | - | chr7_4:14118177-14118196 | Msa1141130:intron | 50.0% | |
ATTGTCATATGCAGGGGCCA+GGG | - | chr7_4:14118206-14118225 | Msa1141130:intron | 50.0% | |
! | AGTGAATAAGTGGGGTGTCC+GGG | + | chr7_4:14118239-14118258 | None:intergenic | 50.0% |
CGCCTCAACCGCTACAAAAA+TGG | + | chr7_4:14118542-14118561 | None:intergenic | 50.0% | |
!! | TGCGCTTTGGGCTTTTGAGT+CGG | + | chr7_4:14118830-14118849 | None:intergenic | 50.0% |
GCTGGATCTGATATGCGCTT+TGG | + | chr7_4:14118843-14118862 | None:intergenic | 50.0% | |
!! | GGCCCTTGAGGTTGATATTC+TGG | + | chr7_4:14118994-14119013 | None:intergenic | 50.0% |
!! | TTTTTCTGGTACGGCCCTTG+AGG | + | chr7_4:14119006-14119025 | None:intergenic | 50.0% |
TTTGTAGGTGGTTAGGGTGG+GGG | + | chr7_4:14119166-14119185 | None:intergenic | 50.0% | |
GTTTGTAGGTGGTTAGGGTG+GGG | + | chr7_4:14119167-14119186 | None:intergenic | 50.0% | |
GTGTTTGTAGGTGGTTAGGG+TGG | + | chr7_4:14119169-14119188 | None:intergenic | 50.0% | |
TCCACACTCTCCTCACGAAT+TGG | - | chr7_4:14119242-14119261 | Msa1141130:CDS | 50.0% | |
CCACACTCTCCTCACGAATT+GGG | - | chr7_4:14119243-14119262 | Msa1141130:CDS | 50.0% | |
CTCTATGTGCCCAATTCGTG+AGG | + | chr7_4:14119255-14119274 | None:intergenic | 50.0% | |
CCCTATCAAGGATAAGCTGC+AGG | - | chr7_4:14119327-14119346 | Msa1141130:CDS | 50.0% | |
GCCTGCAGCTTATCCTTGAT+AGG | + | chr7_4:14119331-14119350 | None:intergenic | 50.0% | |
AGCTGCAGGCTGAACTTTAG+AGG | - | chr7_4:14119341-14119360 | Msa1141130:intron | 50.0% | |
GCTGCAGGCTGAACTTTAGA+GGG | - | chr7_4:14119342-14119361 | Msa1141130:intron | 50.0% | |
AGCATGACGAGCATCTTTGG+CGG | + | chr7_4:14119675-14119694 | None:intergenic | 50.0% | |
! | TGGTGCAGCCGATTTATGGT+TGG | + | chr7_4:14121066-14121085 | None:intergenic | 50.0% |
!! | TCGGCTGCACCATTTTTCCA+CGG | - | chr7_4:14121074-14121093 | Msa1141130:intron | 50.0% |
!! | GATAGTGGGGTTTGTGCACT+AGG | + | chr7_4:14121274-14121293 | None:intergenic | 50.0% |
CTGCGTGATGTTGCAGAGAA+AGG | - | chr7_4:14121999-14122018 | Msa1141130:intron | 50.0% | |
GCAGAGAAAGGAATGGTTGG+AGG | - | chr7_4:14122011-14122030 | Msa1141130:intron | 50.0% | |
GTTGGAAGCCAATGCTGTTG+TGG | - | chr7_4:14122295-14122314 | Msa1141130:intron | 50.0% | |
! | GGTTTGGTTCAAGGAGGGTT+TGG | - | chr7_4:14122719-14122738 | Msa1141130:intron | 50.0% |
CCAACTGAGTTATGCCCACG+GGG | + | chr7_4:14118175-14118194 | None:intergenic | 55.0% | |
GCCAACTGAGTTATGCCCAC+GGG | + | chr7_4:14118176-14118195 | None:intergenic | 55.0% | |
CATTGTCATATGCAGGGGCC+AGG | - | chr7_4:14118205-14118224 | Msa1141130:intron | 55.0% | |
! | GTGAATAAGTGGGGTGTCCG+GGG | + | chr7_4:14118238-14118257 | None:intergenic | 55.0% |
AGGGACTCGCTGGGTAACTT+GGG | + | chr7_4:14118734-14118753 | None:intergenic | 55.0% | |
TTGAGTCGGGACCCGATTTC+AGG | + | chr7_4:14118816-14118835 | None:intergenic | 55.0% | |
!! | GCGCTTTGGGCTTTTGAGTC+GGG | + | chr7_4:14118829-14118848 | None:intergenic | 55.0% |
TCAGATTGTTGGGGCAGAGC+TGG | + | chr7_4:14118861-14118880 | None:intergenic | 55.0% | |
AACTGTGAGGTCCATCCGGA+AGG | + | chr7_4:14119045-14119064 | None:intergenic | 55.0% | |
GTAGGGTGGAGTCCGATGTT+TGG | + | chr7_4:14119196-14119215 | None:intergenic | 55.0% | |
CCCAATTCGTGAGGAGAGTG+TGG | + | chr7_4:14119246-14119265 | None:intergenic | 55.0% | |
GGCATGTCTCACAGAGCTCT+AGG | - | chr7_4:14122032-14122051 | Msa1141130:intron | 55.0% | |
! | GGTTCAAGGAGGGTTTGGTC+TGG | - | chr7_4:14122724-14122743 | Msa1141130:intron | 55.0% |
CCCCGTGGGCATAACTCAGT+TGG | - | chr7_4:14118172-14118191 | Msa1141130:intron | 60.0% | |
TAGCGGTTGAGGCGACCCTT+TGG | - | chr7_4:14118548-14118567 | Msa1141130:CDS | 60.0% | |
GAGGGACTCGCTGGGTAACT+TGG | + | chr7_4:14118735-14118754 | None:intergenic | 60.0% | |
AGTCTTGGGAGGGACTCGCT+GGG | + | chr7_4:14118743-14118762 | None:intergenic | 60.0% | |
! | TAGTCTTGGGAGGGACTCGC+TGG | + | chr7_4:14118744-14118763 | None:intergenic | 60.0% |
GTCATTTCGGGCCTTCCGGA+TGG | - | chr7_4:14119031-14119050 | Msa1141130:CDS | 60.0% | |
TAGGTGGTTAGGGTGGGGGT+GGG | + | chr7_4:14119162-14119181 | None:intergenic | 60.0% | |
! | GACGAGTTGGGGCCCTATCA+AGG | - | chr7_4:14119315-14119334 | Msa1141130:CDS | 60.0% |
! | GGTGGGGGTGGGTTTCACCT+AGG | + | chr7_4:14119151-14119170 | None:intergenic | 65.0% |
GTAGGTGGTTAGGGTGGGGG+TGG | + | chr7_4:14119163-14119182 | None:intergenic | 65.0% | |
AGGGGCCAGGGTTCGAACCC+CGG | - | chr7_4:14118218-14118237 | Msa1141130:intron | 70.0% | |
GGTGTCCGGGGTTCGAACCC+TGG | + | chr7_4:14118226-14118245 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 14117554 | 14123787 | 14117554 | ID=Msa1141130;Name=Msa1141130 |
chr7_4 | mRNA | 14117554 | 14123787 | 14117554 | ID=Msa1141130-mRNA-1;Parent=Msa1141130;Name=Msa1141130-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|0.85|1|1|7|0|619 |
chr7_4 | exon | 14123649 | 14123787 | 14123649 | ID=Msa1141130-mRNA-1:exon:3322;Parent=Msa1141130-mRNA-1 |
chr7_4 | exon | 14121523 | 14121675 | 14121523 | ID=Msa1141130-mRNA-1:exon:3321;Parent=Msa1141130-mRNA-1 |
chr7_4 | exon | 14120368 | 14120706 | 14120368 | ID=Msa1141130-mRNA-1:exon:3320;Parent=Msa1141130-mRNA-1 |
chr7_4 | exon | 14119528 | 14119604 | 14119528 | ID=Msa1141130-mRNA-1:exon:3319;Parent=Msa1141130-mRNA-1 |
chr7_4 | exon | 14118359 | 14119357 | 14118359 | ID=Msa1141130-mRNA-1:exon:3318;Parent=Msa1141130-mRNA-1 |
chr7_4 | exon | 14117711 | 14117803 | 14117711 | ID=Msa1141130-mRNA-1:exon:3317;Parent=Msa1141130-mRNA-1 |
chr7_4 | exon | 14117554 | 14117613 | 14117554 | ID=Msa1141130-mRNA-1:exon:3316;Parent=Msa1141130-mRNA-1 |
chr7_4 | CDS | 14123649 | 14123787 | 14123649 | ID=Msa1141130-mRNA-1:cds;Parent=Msa1141130-mRNA-1 |
chr7_4 | CDS | 14121523 | 14121675 | 14121523 | ID=Msa1141130-mRNA-1:cds;Parent=Msa1141130-mRNA-1 |
chr7_4 | CDS | 14120368 | 14120706 | 14120368 | ID=Msa1141130-mRNA-1:cds;Parent=Msa1141130-mRNA-1 |
chr7_4 | CDS | 14119528 | 14119604 | 14119528 | ID=Msa1141130-mRNA-1:cds;Parent=Msa1141130-mRNA-1 |
chr7_4 | CDS | 14118359 | 14119357 | 14118359 | ID=Msa1141130-mRNA-1:cds;Parent=Msa1141130-mRNA-1 |
chr7_4 | CDS | 14117711 | 14117803 | 14117711 | ID=Msa1141130-mRNA-1:cds;Parent=Msa1141130-mRNA-1 |
chr7_4 | CDS | 14117554 | 14117613 | 14117554 | ID=Msa1141130-mRNA-1:cds;Parent=Msa1141130-mRNA-1 |
Gene Sequence |
Protein sequence |