AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1142470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1142470 MtrunA17_Chr7g0223311 91.512 377 25 4 1 374 1 373 0.0 626
Msa1142470 MtrunA17_Chr4g0010151 37.709 358 188 11 1 347 1 334 1.74e-49 170
Msa1142470 MtrunA17_Chr4g0031411 40.196 306 132 12 1 291 1 270 1.58e-45 159
Msa1142470 MtrunA17_Chr7g0237921 34.865 370 194 10 1 362 1 331 8.81e-45 157
Msa1142470 MtrunA17_Chr2g0328021 40.288 278 95 12 1 274 1 211 4.28e-44 154
Msa1142470 MtrunA17_Chr8g0374251 77.778 63 14 0 78 140 69 131 1.49e-31 122
Msa1142470 MtrunA17_Chr8g0367161 57.143 91 29 1 51 141 16 96 1.74e-30 119
Msa1142470 MtrunA17_Chr8g0374111 59.551 89 29 2 79 161 31 118 3.74e-30 115
Msa1142470 MtrunA17_Chr4g0047001 74.194 62 16 0 78 139 56 117 1.10e-29 117
Msa1142470 MtrunA17_Chr8g0341671 66.667 75 24 1 59 132 1 75 7.22e-29 111
Msa1142470 MtrunA17_Chr2g0282441 56.311 103 37 2 62 157 11 112 8.21e-29 114
Msa1142470 MtrunA17_Chr3g0127201 62.353 85 27 1 47 131 2 81 9.36e-29 113
Msa1142470 MtrunA17_Chr3g0126201 38.854 157 85 2 35 191 9 154 1.52e-28 113
Msa1142470 MtrunA17_Chr5g0411951 88.000 50 6 0 78 127 44 93 1.84e-28 113
Msa1142470 MtrunA17_Chr4g0061761 86.538 52 7 0 76 127 39 90 2.08e-28 113
Msa1142470 MtrunA17_Chr3g0117601 57.778 90 33 2 38 127 27 111 2.90e-28 113
Msa1142470 MtrunA17_Chr4g0030051 83.333 54 9 0 76 129 40 93 6.41e-28 110
Msa1142470 MtrunA17_Chr8g0346551 72.464 69 14 1 79 142 26 94 1.94e-27 109
Msa1142470 MtrunA17_Chr1g0188851 54.217 83 38 0 51 133 17 99 3.18e-27 109
Msa1142470 MtrunA17_Chr2g0326001 78.571 56 12 0 76 131 39 94 5.78e-27 108
Msa1142470 MtrunA17_Chr2g0308011 88.000 50 6 0 76 125 36 85 8.69e-27 105
Msa1142470 MtrunA17_Chr2g0282511 86.000 50 7 0 76 125 44 93 1.96e-26 107
Msa1142470 MtrunA17_Chr1g0177251 79.245 53 11 0 79 131 14 66 4.48e-26 105
Msa1142470 MtrunA17_Chr2g0282051 69.697 66 18 1 69 134 38 101 6.72e-26 105
Msa1142470 MtrunA17_Chr4g0047761 73.770 61 14 1 74 134 69 127 4.65e-25 103
Msa1142470 MtrunA17_Chr6g0453321 76.471 51 12 0 79 129 138 188 1.69e-23 101
Msa1142470 MtrunA17_Chr2g0283811 76.000 50 12 0 79 128 49 98 1.89e-23 95.5
Msa1142470 MtrunA17_Chr4g0042481 56.962 79 23 2 79 157 124 191 8.54e-23 99.4
Msa1142470 MtrunA17_Chr7g0217581 74.510 51 13 0 79 129 234 284 1.25e-22 99.4
Msa1142470 MtrunA17_Chr8g0355261 69.811 53 16 0 79 131 120 172 1.26e-22 98.6
Msa1142470 MtrunA17_Chr3g0092111 67.213 61 16 1 79 139 138 194 1.95e-22 98.2
Msa1142470 MtrunA17_Chr6g0460721 71.154 52 15 0 78 129 90 141 5.74e-22 95.5
Msa1142470 MtrunA17_Chr5g0417571 70.588 51 15 0 79 129 140 190 7.20e-22 95.1
Msa1142470 MtrunA17_Chr7g0254161 67.241 58 18 1 78 135 102 158 9.92e-22 95.9
Msa1142470 MtrunA17_Chr5g0417601 68.966 58 17 1 79 136 142 198 1.40e-21 95.1
Msa1142470 MtrunA17_Chr6g0460731 67.308 52 17 0 78 129 97 148 3.16e-21 94.0
Msa1142470 MtrunA17_Chr5g0417551 36.723 177 88 7 24 192 79 239 3.52e-21 94.0
Msa1142470 MtrunA17_Chr5g0417561 43.548 124 47 4 79 192 121 231 1.22e-20 92.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1142470 AT3G55370.2 37.069 348 149 17 1 325 1 301 3.44e-42 151
Msa1142470 AT3G55370.1 39.643 280 119 12 1 274 1 236 3.38e-41 147
Msa1142470 AT3G55370.3 38.996 259 113 10 17 274 67 281 8.12e-37 137
Msa1142470 AT2G37590.1 48.980 147 59 3 1 133 1 145 6.11e-36 134
Msa1142470 AT1G07640.2 70.732 82 22 1 53 134 55 134 5.61e-34 129
Msa1142470 AT1G07640.1 72.727 77 19 1 58 134 4 78 7.20e-34 127
Msa1142470 AT1G07640.3 70.732 82 22 1 53 134 63 142 7.53e-34 128
Msa1142470 AT2G28810.1 32.383 386 164 12 1 350 1 325 6.55e-33 126
Msa1142470 AT5G02460.1 70.130 77 21 1 55 131 75 149 3.04e-32 125
Msa1142470 AT2G28810.2 34.768 302 130 8 61 350 62 308 1.31e-31 122
Msa1142470 AT1G51700.1 79.032 62 13 0 78 139 34 95 8.84e-31 116
Msa1142470 AT5G60200.1 58.889 90 31 2 76 161 54 141 3.49e-30 116
Msa1142470 AT5G65590.1 80.328 61 12 0 78 138 42 102 4.30e-30 117
Msa1142470 AT2G28510.1 77.273 66 13 1 73 138 44 107 6.81e-30 116
Msa1142470 AT1G21340.1 56.322 87 37 1 49 134 9 95 9.83e-30 115
Msa1142470 AT5G66940.1 52.294 109 45 2 79 180 34 142 1.05e-29 114
Msa1142470 AT5G60850.1 56.989 93 33 2 67 152 38 130 1.67e-29 116
Msa1142470 AT3G21270.1 83.929 56 9 0 78 133 30 85 3.41e-29 112
Msa1142470 AT3G45610.1 51.456 103 39 2 39 141 10 101 1.45e-28 112
Msa1142470 AT5G62940.1 88.235 51 6 0 77 127 73 123 4.56e-28 113
Msa1142470 AT4G38000.1 71.212 66 19 0 78 143 42 107 2.22e-27 108
Msa1142470 AT3G50410.1 75.439 57 14 0 79 135 32 88 3.18e-27 108
Msa1142470 AT1G28310.1 75.439 57 14 0 78 134 28 84 5.27e-27 109
Msa1142470 AT1G28310.2 75.439 57 14 0 78 134 52 108 7.81e-27 109
Msa1142470 AT3G52440.1 57.143 91 32 2 72 162 20 103 8.56e-27 107
Msa1142470 AT3G52440.2 64.474 76 24 2 73 146 40 114 1.31e-26 107
Msa1142470 AT4G00940.1 60.274 73 29 0 59 131 50 122 1.34e-25 105
Msa1142470 AT4G00940.3 60.274 73 29 0 59 131 50 122 1.34e-25 105
Msa1142470 AT4G00940.2 60.274 73 29 0 59 131 50 122 1.34e-25 105
Msa1142470 AT4G21050.1 64.706 68 23 1 76 143 23 89 2.70e-25 102
Msa1142470 AT3G61850.2 62.857 70 26 0 79 148 64 133 3.03e-25 103
Msa1142470 AT3G61850.3 62.857 70 26 0 79 148 64 133 3.03e-25 103
Msa1142470 AT3G61850.1 62.857 70 26 0 79 148 76 145 3.09e-25 104
Msa1142470 AT3G61850.4 62.857 70 26 0 79 148 76 145 4.11e-25 104
Msa1142470 AT3G61850.5 62.857 70 26 0 79 148 64 133 4.29e-25 104
Msa1142470 AT4G24060.1 75.000 56 14 0 76 131 52 107 5.60e-25 104
Msa1142470 AT1G47655.1 75.000 52 13 0 74 125 26 77 3.61e-23 96.7
Msa1142470 AT2G46590.1 84.783 46 7 0 79 124 70 115 4.59e-23 99.4
Msa1142470 AT2G46590.2 84.783 46 7 0 79 124 82 127 5.02e-23 99.4
Msa1142470 AT1G29160.1 75.472 53 12 1 79 131 64 115 6.57e-23 94.7
Msa1142470 AT3G47500.1 74.510 51 13 0 79 129 112 162 6.61e-23 100
Msa1142470 AT2G34140.1 75.472 53 12 1 79 131 60 111 7.03e-23 94.7
Msa1142470 AT1G64620.1 76.471 51 12 0 76 126 48 98 1.09e-22 98.2
Msa1142470 AT1G69570.1 74.510 51 13 0 79 129 134 184 1.99e-22 98.2
Msa1142470 AT5G39660.3 55.000 80 25 2 79 158 140 208 2.54e-22 98.2
Msa1142470 AT5G39660.1 55.000 80 25 2 79 158 140 208 2.54e-22 98.2
Msa1142470 AT5G39660.2 55.000 80 25 2 79 158 140 208 2.54e-22 98.2
Msa1142470 AT5G62430.1 54.167 72 32 1 58 129 36 106 4.28e-22 95.5
Msa1142470 AT4G21040.1 63.077 65 22 1 79 143 27 89 1.32e-21 92.8
Msa1142470 AT1G26790.1 50.633 79 37 1 51 129 87 163 1.57e-21 95.1
Msa1142470 AT4G21080.1 61.538 65 23 1 79 143 27 89 1.31e-20 90.5
Msa1142470 AT4G21030.1 57.692 52 22 0 79 130 23 74 3.27e-14 71.2

Find 105 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAAACTTGTCGTCGTTAT+TGG 0.174969 7_4:-16871448 Msa1142470:CDS
GAAATAGTAATGATCTATTT+TGG 0.191335 7_4:-16870743 Msa1142470:CDS
CTAAACTTTGTATTTCTAAA+TGG 0.208729 7_4:-16870455 Msa1142470:three_prime_UTR
CAAATTGGATTATTTCAATT+TGG 0.211059 7_4:-16870927 Msa1142470:CDS
AGTAATTTGCAACCACAAAT+TGG 0.232158 7_4:-16870942 Msa1142470:CDS
ATCCTCAAATCTAGTGCTTT+TGG 0.236518 7_4:-16870647 Msa1142470:exon
GCAAATTCTTCTTCTAATAA+TGG 0.247534 7_4:-16871263 Msa1142470:CDS
GTGCTGCTGCAGCATCATTC+TGG 0.303371 7_4:+16871552 None:intergenic
ATTAGTTCACTTGCTAACTA+TGG 0.312768 7_4:-16870547 Msa1142470:three_prime_UTR
TGATGAACTTGTAGCGAATT+CGG 0.333842 7_4:+16870993 None:intergenic
AATCCGCGCCATCTGAATTA+AGG 0.337575 7_4:+16870337 None:intergenic
GACCGAAACAAATTTCTTTG+TGG 0.341322 7_4:+16870885 None:intergenic
TGAGGGCATTGGTTCTTTGT+TGG 0.348674 7_4:-16871141 Msa1142470:CDS
CAATTTGGTGGAGAAAATAA+TGG 0.350809 7_4:-16870912 Msa1142470:CDS
TGGAGATGATCGTTATGATT+AGG 0.351307 7_4:+16871326 None:intergenic
CTTGGTAGTGGTTCTTCAAT+TGG 0.353175 7_4:-16871074 Msa1142470:CDS
CAAGGTATAATTAGAGTGTT+AGG 0.368380 7_4:-16870573 Msa1142470:three_prime_UTR
TTTAATCAGCAAGTAGGAAT+TGG 0.368947 7_4:-16871713 Msa1142470:intron
CAGGTCGGTGCCGGTGCTGC+TGG 0.390469 7_4:-16871305 Msa1142470:CDS
AATTGAAATAATCCAATTTG+TGG 0.391831 7_4:+16870930 None:intergenic
CTGTTGGAGGTGGTTGTAGA+AGG 0.393447 7_4:-16871397 Msa1142470:CDS
AGCCACAAAGAAATTTGTTT+CGG 0.401716 7_4:-16870887 Msa1142470:CDS
CATTGTTCACCAATGCCATT+TGG 0.402281 7_4:+16871023 None:intergenic
TTGGGTGGATCTAGATAGAT+TGG 0.404500 7_4:+16872065 None:intergenic
CTAGATAGATTGGGAGGGAG+GGG 0.407945 7_4:+16872075 None:intergenic
GTGTTTGTTGATTCACATCT+TGG 0.421696 7_4:+16871521 None:intergenic
AAGAAATTTGTTTCGGTCGA+AGG 0.427281 7_4:-16870880 Msa1142470:CDS
TCTATCTAGATCCACCCAAC+TGG 0.440222 7_4:-16872061 Msa1142470:CDS
ATTGGATTATTTCAATTTGG+TGG 0.443223 7_4:-16870924 Msa1142470:CDS
TACATTTAACTGCAATATCA+AGG 0.447568 7_4:+16870360 None:intergenic
TATTCTTCAAGTGTTAGTAT+TGG 0.447776 7_4:-16870852 Msa1142470:CDS
TAACACACACATATAGCTAA+TGG 0.455892 7_4:+16870507 None:intergenic
CAGCAGCACCGGCACCGACC+TGG 0.456075 7_4:+16871306 None:intergenic
AACCAAAAGCACTAGATTTG+AGG 0.456139 7_4:+16870645 None:intergenic
TCAAGTTAATACAGTTAAAG+TGG 0.456282 7_4:-16870820 Msa1142470:CDS
GGTTGCAAATTACTCAAGAA+AGG 0.462145 7_4:+16870951 None:intergenic
GAGAAAAGTGATTACAAAGA+TGG 0.462597 7_4:+16872198 None:intergenic
GTTACAAATGGAAATTGTGT+TGG 0.468460 7_4:+16871200 None:intergenic
TCTAGATAGATTGGGAGGGA+GGG 0.471768 7_4:+16872074 None:intergenic
CTTCTACAACCACCTCCAAC+AGG 0.475660 7_4:+16871398 None:intergenic
CGAAACGTTCCTGTTGGAGG+TGG 0.475928 7_4:-16871407 Msa1142470:CDS
TCTTCAATTGGTAATGGTAA+TGG 0.476358 7_4:-16871062 Msa1142470:CDS
ATCTAGATAGATTGGGAGGG+AGG 0.477475 7_4:+16872073 None:intergenic
TCCACCCAACTGGACACAAC+AGG 0.479085 7_4:-16872051 Msa1142470:intron
CGATCTAAAGAGGTTACAAA+TGG 0.480214 7_4:+16871188 None:intergenic
AGTGGTTCTTCAATTGGTAA+TGG 0.485640 7_4:-16871068 Msa1142470:CDS
GCTCGATCGGTCATTGATAC+TGG 0.489149 7_4:+16871593 None:intergenic
CTTCGAAACGTTCCTGTTGG+AGG 0.496892 7_4:-16871410 Msa1142470:CDS
AGCTATATGTGTGTGTTATG+AGG 0.506294 7_4:-16870502 Msa1142470:three_prime_UTR
GTTGAGTTTCAACTTGGTAG+TGG 0.507591 7_4:-16871086 Msa1142470:CDS
ATATTCATCATTCTAAGTTG+TGG 0.509679 7_4:-16870420 Msa1142470:three_prime_UTR
ATACTGGTCTTCTAGACCCT+TGG 0.510341 7_4:+16871609 None:intergenic
AGTTATGTTTCTGAGGGCAT+TGG 0.510514 7_4:-16871152 Msa1142470:CDS
GTTGCAAATTACTCAAGAAA+GGG 0.514735 7_4:+16870952 None:intergenic
GGAAATTGTGTTGGAAAATG+AGG 0.514769 7_4:+16871209 None:intergenic
CAGCAAGTAGGAATTGGTAT+TGG 0.517909 7_4:-16871707 Msa1142470:CDS
GATCATCTCCAGGTCGGTGC+CGG 0.519214 7_4:-16871314 Msa1142470:CDS
GGCTCTTTGTTGATACCAAA+TGG 0.520108 7_4:-16871038 Msa1142470:CDS
CGACAATAGTTATGTTTCTG+AGG 0.521037 7_4:-16871159 Msa1142470:CDS
GACAATAGTTATGTTTCTGA+GGG 0.522293 7_4:-16871158 Msa1142470:CDS
CTGGTGGTTCTAGCTCAGCA+AGG 0.527734 7_4:-16871286 Msa1142470:CDS
GAAGCTGATGGCAGCTACCA+AGG 0.530104 7_4:-16871626 Msa1142470:CDS
GCTAGAACCACCAGCAGCAC+CGG 0.537679 7_4:+16871295 None:intergenic
CTAACACTCTAATTATACCT+TGG 0.540245 7_4:+16870574 None:intergenic
AATACCTGTTGTGTCCAGTT+GGG 0.542054 7_4:+16872047 None:intergenic
GCACTTCGAAACGTTCCTGT+TGG 0.543248 7_4:-16871413 Msa1142470:CDS
ACTTTAACTGTATTAACTTG+AGG 0.543542 7_4:+16870822 None:intergenic
ACCTGTTGTGTCCAGTTGGG+TGG 0.544400 7_4:+16872050 None:intergenic
GTCGCTATGACGATCTAAAG+AGG 0.549924 7_4:+16871178 None:intergenic
ACTAATTCTAATGTGAATGT+TGG 0.552195 7_4:-16871236 Msa1142470:CDS
CAAGGTGGTGAAGTGAAACT+AGG 0.554007 7_4:+16870672 None:intergenic
CACTAGATTTGAGGATCACA+AGG 0.554201 7_4:+16870654 None:intergenic
GCTATATGTGTGTGTTATGA+GGG 0.556952 7_4:-16870501 Msa1142470:three_prime_UTR
AAATAATTTAATCAGCAAGT+AGG 0.559549 7_4:-16871719 Msa1142470:intron
GTGGAAGAAAACAATCATCA+AGG 0.560168 7_4:-16870801 Msa1142470:CDS
TGGATATGTGAGTGTGTGGG+TGG 0.561609 7_4:+16872146 None:intergenic
CTTTGACATCTTAGCTCGAT+CGG 0.562486 7_4:+16871580 None:intergenic
TGGGTGGATCTAGATAGATT+GGG 0.569105 7_4:+16872066 None:intergenic
TAATCATAACGATCATCTCC+AGG 0.573464 7_4:-16871324 Msa1142470:CDS
TAAAAGAGAAAGCTTAGCCA+TGG 0.573718 7_4:-16872102 Msa1142470:exon
TGTGTTATGAGGGAAGATAA+AGG 0.574143 7_4:-16870491 Msa1142470:three_prime_UTR
GTCGGTGCCGGTGCTGCTGG+TGG 0.577708 7_4:-16871302 Msa1142470:CDS
GTAGCTGCCATCAGCTTCAA+CGG 0.578179 7_4:+16871631 None:intergenic
TCAATTGGTAATGGTAATGG+TGG 0.579040 7_4:-16871059 Msa1142470:CDS
TAATACCTGTTGTGTCCAGT+TGG 0.582298 7_4:+16872046 None:intergenic
TCGTTATGATTAGGTTTCAG+AGG 0.584218 7_4:+16871335 None:intergenic
CGTCGTTATTGGACTAGAGG+TGG 0.585783 7_4:-16871437 Msa1142470:CDS
TCTGTCACCGTTGAAGCTGA+TGG 0.588932 7_4:-16871638 Msa1142470:CDS
ACTAATGTTGAGTTTCAACT+TGG 0.589155 7_4:-16871092 Msa1142470:CDS
AAGCTGATGGCAGCTACCAA+GGG 0.593247 7_4:-16871625 Msa1142470:CDS
CAAATGGCATTGGTGAACAA+TGG 0.594140 7_4:-16871022 Msa1142470:CDS
TGTCGTCGTTATTGGACTAG+AGG 0.602398 7_4:-16871440 Msa1142470:CDS
ATGGCATTGGTGAACAATGG+AGG 0.607659 7_4:-16871019 Msa1142470:CDS
AATGGAAATGGAAATGGAAG+TGG 0.608244 7_4:-16870720 Msa1142470:CDS
GAAGTGGTAATGAAAATGCA+TGG 0.613061 7_4:-16870704 Msa1142470:CDS
TTGTTGATACCAAATGGCAT+TGG 0.626903 7_4:-16871032 Msa1142470:CDS
GATAGCGGTTGCAAAGCTGA+TGG 0.634025 7_4:+16871674 None:intergenic
TGGTGGTTCTAGCTCAGCAA+GGG 0.640666 7_4:-16871285 Msa1142470:CDS
TGGGAGGGAGGGGAAGACCA+TGG 0.641218 7_4:+16872085 None:intergenic
TGGATCTAGATAGATTGGGA+GGG 0.641448 7_4:+16872070 None:intergenic
GTGGATCTAGATAGATTGGG+AGG 0.647429 7_4:+16872069 None:intergenic
GACATCGTTGAAGCTGATAG+CGG 0.680206 7_4:+16871659 None:intergenic
CATAACGATCATCTCCAGGT+CGG 0.682152 7_4:-16871320 Msa1142470:CDS
TCATATATAGAAATGATCCA+AGG 0.682468 7_4:-16870591 Msa1142470:three_prime_UTR
TAGATTTGAGGATCACAAGG+TGG 0.736101 7_4:+16870657 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAGTTTTGATGAATTTTT+TGG + chr7_4:16870441-16870460 None:intergenic 15.0%
!!! TATTTTATAACAAAAGTGTA+AGG + chr7_4:16870830-16870849 None:intergenic 15.0%
!!! AAAAGTTTTGATGAATTTTT+TGG + chr7_4:16870441-16870460 None:intergenic 15.0%
!!! TATTTTATAACAAAAGTGTA+AGG + chr7_4:16870830-16870849 None:intergenic 15.0%
!! AGAAAGAAAAAGTGAAAAAA+AGG + chr7_4:16870618-16870637 None:intergenic 20.0%
!!! TTTTTCACTTTTTCTTTCTT+TGG - chr7_4:16870619-16870638 Msa1142470:three_prime_UTR 20.0%
!! AAATAATTTAATCAGCAAGT+AGG - chr7_4:16870845-16870864 Msa1142470:CDS 20.0%
!! AATTGAAATAATCCAATTTG+TGG + chr7_4:16871637-16871656 None:intergenic 20.0%
!! CAAATTGGATTATTTCAATT+TGG - chr7_4:16871637-16871656 Msa1142470:CDS 20.0%
!!! GAAATAGTAATGATCTATTT+TGG - chr7_4:16871821-16871840 Msa1142470:intron 20.0%
!!! CTAAACTTTGTATTTCTAAA+TGG - chr7_4:16872109-16872128 Msa1142470:five_prime_UTR 20.0%
!! AGAAAGAAAAAGTGAAAAAA+AGG + chr7_4:16870618-16870637 None:intergenic 20.0%
!!! TTTTTCACTTTTTCTTTCTT+TGG - chr7_4:16870619-16870638 Msa1142470:three_prime_UTR 20.0%
!! AAATAATTTAATCAGCAAGT+AGG - chr7_4:16870845-16870864 Msa1142470:CDS 20.0%
!! AATTGAAATAATCCAATTTG+TGG + chr7_4:16871637-16871656 None:intergenic 20.0%
!! CAAATTGGATTATTTCAATT+TGG - chr7_4:16871637-16871656 Msa1142470:CDS 20.0%
!!! GAAATAGTAATGATCTATTT+TGG - chr7_4:16871821-16871840 Msa1142470:intron 20.0%
!!! CTAAACTTTGTATTTCTAAA+TGG - chr7_4:16872109-16872128 Msa1142470:five_prime_UTR 20.0%
! CAAAGATGGAAAAAAGATAA+AGG + chr7_4:16870355-16870374 None:intergenic 25.0%
! GCAAATTCTTCTTCTAATAA+TGG - chr7_4:16871301-16871320 Msa1142470:CDS 25.0%
! ACTAATTCTAATGTGAATGT+TGG - chr7_4:16871328-16871347 Msa1142470:CDS 25.0%
!! AGTACTATTGCTCATATTTT+TGG + chr7_4:16871449-16871468 None:intergenic 25.0%
! ATTGGATTATTTCAATTTGG+TGG - chr7_4:16871640-16871659 Msa1142470:CDS 25.0%
! TATTCTTCAAGTGTTAGTAT+TGG - chr7_4:16871712-16871731 Msa1142470:intron 25.0%
!! ACTTTAACTGTATTAACTTG+AGG + chr7_4:16871745-16871764 None:intergenic 25.0%
! TCAAGTTAATACAGTTAAAG+TGG - chr7_4:16871744-16871763 Msa1142470:intron 25.0%
!!! AGTAATGATCTATTTTGGAA+TGG - chr7_4:16871826-16871845 Msa1142470:intron 25.0%
!!! GCTTTTGGTTTCTTAATTAA+TGG - chr7_4:16871932-16871951 Msa1142470:intron 25.0%
! TCATATATAGAAATGATCCA+AGG - chr7_4:16871973-16871992 Msa1142470:intron 25.0%
! ATATTCATCATTCTAAGTTG+TGG - chr7_4:16872144-16872163 Msa1142470:five_prime_UTR 25.0%
! TACATTTAACTGCAATATCA+AGG + chr7_4:16872207-16872226 None:intergenic 25.0%
! CAAAGATGGAAAAAAGATAA+AGG + chr7_4:16870355-16870374 None:intergenic 25.0%
! GCAAATTCTTCTTCTAATAA+TGG - chr7_4:16871301-16871320 Msa1142470:CDS 25.0%
! ACTAATTCTAATGTGAATGT+TGG - chr7_4:16871328-16871347 Msa1142470:CDS 25.0%
!! AGTACTATTGCTCATATTTT+TGG + chr7_4:16871449-16871468 None:intergenic 25.0%
! ATTGGATTATTTCAATTTGG+TGG - chr7_4:16871640-16871659 Msa1142470:CDS 25.0%
! TATTCTTCAAGTGTTAGTAT+TGG - chr7_4:16871712-16871731 Msa1142470:intron 25.0%
!! ACTTTAACTGTATTAACTTG+AGG + chr7_4:16871745-16871764 None:intergenic 25.0%
! TCAAGTTAATACAGTTAAAG+TGG - chr7_4:16871744-16871763 Msa1142470:intron 25.0%
!!! AGTAATGATCTATTTTGGAA+TGG - chr7_4:16871826-16871845 Msa1142470:intron 25.0%
!!! GCTTTTGGTTTCTTAATTAA+TGG - chr7_4:16871932-16871951 Msa1142470:intron 25.0%
! TCATATATAGAAATGATCCA+AGG - chr7_4:16871973-16871992 Msa1142470:intron 25.0%
! ATATTCATCATTCTAAGTTG+TGG - chr7_4:16872144-16872163 Msa1142470:five_prime_UTR 25.0%
! TACATTTAACTGCAATATCA+AGG + chr7_4:16872207-16872226 None:intergenic 25.0%
GAGAAAAGTGATTACAAAGA+TGG + chr7_4:16870369-16870388 None:intergenic 30.0%
AGATTGATTATAGTGTGTGT+AGG + chr7_4:16870696-16870715 None:intergenic 30.0%
TTTAATCAGCAAGTAGGAAT+TGG - chr7_4:16870851-16870870 Msa1142470:CDS 30.0%
GTTACAAATGGAAATTGTGT+TGG + chr7_4:16871367-16871386 None:intergenic 30.0%
! GACAATAGTTATGTTTCTGA+GGG - chr7_4:16871406-16871425 Msa1142470:CDS 30.0%
ACTAATGTTGAGTTTCAACT+TGG - chr7_4:16871472-16871491 Msa1142470:CDS 30.0%
!! TCTTCAATTGGTAATGGTAA+TGG - chr7_4:16871502-16871521 Msa1142470:CDS 30.0%
GTTGCAAATTACTCAAGAAA+GGG + chr7_4:16871615-16871634 None:intergenic 30.0%
! AGTAATTTGCAACCACAAAT+TGG - chr7_4:16871622-16871641 Msa1142470:CDS 30.0%
! CAATTTGGTGGAGAAAATAA+TGG - chr7_4:16871652-16871671 Msa1142470:CDS 30.0%
! AGCCACAAAGAAATTTGTTT+CGG - chr7_4:16871677-16871696 Msa1142470:CDS 30.0%
TTGCCAAAAAATCTCTTGAA+TGG - chr7_4:16871793-16871812 Msa1142470:intron 30.0%
!!! GAACCATTCAAGAGATTTTT+TGG + chr7_4:16871799-16871818 None:intergenic 30.0%
AAAAATCTCTTGAATGGTTC+AGG - chr7_4:16871799-16871818 Msa1142470:intron 30.0%
!!! GATCTATTTTGGAATGGAAA+TGG - chr7_4:16871832-16871851 Msa1142470:intron 30.0%
!!! TTTTGGAATGGAAATGGAAA+TGG - chr7_4:16871838-16871857 Msa1142470:intron 30.0%
CTAACACTCTAATTATACCT+TGG + chr7_4:16871993-16872012 None:intergenic 30.0%
! CAAGGTATAATTAGAGTGTT+AGG - chr7_4:16871991-16872010 Msa1142470:intron 30.0%
! ATTAGTTCACTTGCTAACTA+TGG - chr7_4:16872017-16872036 Msa1142470:intron 30.0%
TAACACACACATATAGCTAA+TGG + chr7_4:16872060-16872079 None:intergenic 30.0%
GAGAAAAGTGATTACAAAGA+TGG + chr7_4:16870369-16870388 None:intergenic 30.0%
AGATTGATTATAGTGTGTGT+AGG + chr7_4:16870696-16870715 None:intergenic 30.0%
TTTAATCAGCAAGTAGGAAT+TGG - chr7_4:16870851-16870870 Msa1142470:CDS 30.0%
GTTACAAATGGAAATTGTGT+TGG + chr7_4:16871367-16871386 None:intergenic 30.0%
! GACAATAGTTATGTTTCTGA+GGG - chr7_4:16871406-16871425 Msa1142470:CDS 30.0%
ACTAATGTTGAGTTTCAACT+TGG - chr7_4:16871472-16871491 Msa1142470:CDS 30.0%
!! TCTTCAATTGGTAATGGTAA+TGG - chr7_4:16871502-16871521 Msa1142470:CDS 30.0%
GTTGCAAATTACTCAAGAAA+GGG + chr7_4:16871615-16871634 None:intergenic 30.0%
! AGTAATTTGCAACCACAAAT+TGG - chr7_4:16871622-16871641 Msa1142470:CDS 30.0%
! CAATTTGGTGGAGAAAATAA+TGG - chr7_4:16871652-16871671 Msa1142470:CDS 30.0%
! AGCCACAAAGAAATTTGTTT+CGG - chr7_4:16871677-16871696 Msa1142470:CDS 30.0%
TTGCCAAAAAATCTCTTGAA+TGG - chr7_4:16871793-16871812 Msa1142470:intron 30.0%
!!! GAACCATTCAAGAGATTTTT+TGG + chr7_4:16871799-16871818 None:intergenic 30.0%
AAAAATCTCTTGAATGGTTC+AGG - chr7_4:16871799-16871818 Msa1142470:intron 30.0%
!!! GATCTATTTTGGAATGGAAA+TGG - chr7_4:16871832-16871851 Msa1142470:intron 30.0%
!!! TTTTGGAATGGAAATGGAAA+TGG - chr7_4:16871838-16871857 Msa1142470:intron 30.0%
CTAACACTCTAATTATACCT+TGG + chr7_4:16871993-16872012 None:intergenic 30.0%
! CAAGGTATAATTAGAGTGTT+AGG - chr7_4:16871991-16872010 Msa1142470:intron 30.0%
! ATTAGTTCACTTGCTAACTA+TGG - chr7_4:16872017-16872036 Msa1142470:intron 30.0%
TAACACACACATATAGCTAA+TGG + chr7_4:16872060-16872079 None:intergenic 30.0%
! TTTTGGATATGTGAGTGTGT+GGG + chr7_4:16870424-16870443 None:intergenic 35.0%
! TTTTTGGATATGTGAGTGTG+TGG + chr7_4:16870425-16870444 None:intergenic 35.0%
TAAAAGAGAAAGCTTAGCCA+TGG - chr7_4:16870462-16870481 Msa1142470:three_prime_UTR 35.0%
!! GTGTTTGTTGATTCACATCT+TGG + chr7_4:16871046-16871065 None:intergenic 35.0%
! GACGACAAGTTTTGCAAAAA+TGG + chr7_4:16871111-16871130 None:intergenic 35.0%
TCGTTATGATTAGGTTTCAG+AGG + chr7_4:16871232-16871251 None:intergenic 35.0%
TGGAGATGATCGTTATGATT+AGG + chr7_4:16871241-16871260 None:intergenic 35.0%
TAATCATAACGATCATCTCC+AGG - chr7_4:16871240-16871259 Msa1142470:CDS 35.0%
GGAAATTGTGTTGGAAAATG+AGG + chr7_4:16871358-16871377 None:intergenic 35.0%
CGATCTAAAGAGGTTACAAA+TGG + chr7_4:16871379-16871398 None:intergenic 35.0%
! CGACAATAGTTATGTTTCTG+AGG - chr7_4:16871405-16871424 Msa1142470:CDS 35.0%
AGTGGTTCTTCAATTGGTAA+TGG - chr7_4:16871496-16871515 Msa1142470:CDS 35.0%
!! TCAATTGGTAATGGTAATGG+TGG - chr7_4:16871505-16871524 Msa1142470:CDS 35.0%
TTGTTGATACCAAATGGCAT+TGG - chr7_4:16871532-16871551 Msa1142470:CDS 35.0%
TGATGAACTTGTAGCGAATT+CGG + chr7_4:16871574-16871593 None:intergenic 35.0%
GGTTGCAAATTACTCAAGAA+AGG + chr7_4:16871616-16871635 None:intergenic 35.0%
GACCGAAACAAATTTCTTTG+TGG + chr7_4:16871682-16871701 None:intergenic 35.0%
! AAGAAATTTGTTTCGGTCGA+AGG - chr7_4:16871684-16871703 Msa1142470:CDS 35.0%
GTGGAAGAAAACAATCATCA+AGG - chr7_4:16871763-16871782 Msa1142470:intron 35.0%
AATGGAAATGGAAATGGAAG+TGG - chr7_4:16871844-16871863 Msa1142470:intron 35.0%
! GAAGTGGTAATGAAAATGCA+TGG - chr7_4:16871860-16871879 Msa1142470:intron 35.0%
! ATCCTCAAATCTAGTGCTTT+TGG - chr7_4:16871917-16871936 Msa1142470:intron 35.0%
!! AACCAAAAGCACTAGATTTG+AGG + chr7_4:16871922-16871941 None:intergenic 35.0%
AGCTATATGTGTGTGTTATG+AGG - chr7_4:16872062-16872081 Msa1142470:CDS 35.0%
GCTATATGTGTGTGTTATGA+GGG - chr7_4:16872063-16872082 Msa1142470:CDS 35.0%
TGTGTTATGAGGGAAGATAA+AGG - chr7_4:16872073-16872092 Msa1142470:CDS 35.0%
! TTTTGGATATGTGAGTGTGT+GGG + chr7_4:16870424-16870443 None:intergenic 35.0%
! TTTTTGGATATGTGAGTGTG+TGG + chr7_4:16870425-16870444 None:intergenic 35.0%
TAAAAGAGAAAGCTTAGCCA+TGG - chr7_4:16870462-16870481 Msa1142470:three_prime_UTR 35.0%
!! GTGTTTGTTGATTCACATCT+TGG + chr7_4:16871046-16871065 None:intergenic 35.0%
! GACGACAAGTTTTGCAAAAA+TGG + chr7_4:16871111-16871130 None:intergenic 35.0%
TCGTTATGATTAGGTTTCAG+AGG + chr7_4:16871232-16871251 None:intergenic 35.0%
TGGAGATGATCGTTATGATT+AGG + chr7_4:16871241-16871260 None:intergenic 35.0%
TAATCATAACGATCATCTCC+AGG - chr7_4:16871240-16871259 Msa1142470:CDS 35.0%
GGAAATTGTGTTGGAAAATG+AGG + chr7_4:16871358-16871377 None:intergenic 35.0%
CGATCTAAAGAGGTTACAAA+TGG + chr7_4:16871379-16871398 None:intergenic 35.0%
! CGACAATAGTTATGTTTCTG+AGG - chr7_4:16871405-16871424 Msa1142470:CDS 35.0%
AGTGGTTCTTCAATTGGTAA+TGG - chr7_4:16871496-16871515 Msa1142470:CDS 35.0%
!! TCAATTGGTAATGGTAATGG+TGG - chr7_4:16871505-16871524 Msa1142470:CDS 35.0%
TTGTTGATACCAAATGGCAT+TGG - chr7_4:16871532-16871551 Msa1142470:CDS 35.0%
TGATGAACTTGTAGCGAATT+CGG + chr7_4:16871574-16871593 None:intergenic 35.0%
GGTTGCAAATTACTCAAGAA+AGG + chr7_4:16871616-16871635 None:intergenic 35.0%
GACCGAAACAAATTTCTTTG+TGG + chr7_4:16871682-16871701 None:intergenic 35.0%
! AAGAAATTTGTTTCGGTCGA+AGG - chr7_4:16871684-16871703 Msa1142470:CDS 35.0%
GTGGAAGAAAACAATCATCA+AGG - chr7_4:16871763-16871782 Msa1142470:intron 35.0%
AATGGAAATGGAAATGGAAG+TGG - chr7_4:16871844-16871863 Msa1142470:intron 35.0%
! GAAGTGGTAATGAAAATGCA+TGG - chr7_4:16871860-16871879 Msa1142470:intron 35.0%
! ATCCTCAAATCTAGTGCTTT+TGG - chr7_4:16871917-16871936 Msa1142470:intron 35.0%
!! AACCAAAAGCACTAGATTTG+AGG + chr7_4:16871922-16871941 None:intergenic 35.0%
AGCTATATGTGTGTGTTATG+AGG - chr7_4:16872062-16872081 Msa1142470:CDS 35.0%
GCTATATGTGTGTGTTATGA+GGG - chr7_4:16872063-16872082 Msa1142470:CDS 35.0%
TGTGTTATGAGGGAAGATAA+AGG - chr7_4:16872073-16872092 Msa1142470:CDS 35.0%
TGGATCTAGATAGATTGGGA+GGG + chr7_4:16870497-16870516 None:intergenic 40.0%
TGGGTGGATCTAGATAGATT+GGG + chr7_4:16870501-16870520 None:intergenic 40.0%
TTGGGTGGATCTAGATAGAT+TGG + chr7_4:16870502-16870521 None:intergenic 40.0%
AATACCTGTTGTGTCCAGTT+GGG + chr7_4:16870520-16870539 None:intergenic 40.0%
TAATACCTGTTGTGTCCAGT+TGG + chr7_4:16870521-16870540 None:intergenic 40.0%
CAGCAAGTAGGAATTGGTAT+TGG - chr7_4:16870857-16870876 Msa1142470:CDS 40.0%
CTTTGACATCTTAGCTCGAT+CGG + chr7_4:16870987-16871006 None:intergenic 40.0%
! CAAGTTTTGCAAAAATGGCG+TGG + chr7_4:16871106-16871125 None:intergenic 40.0%
GCAAAACTTGTCGTCGTTAT+TGG - chr7_4:16871116-16871135 Msa1142470:CDS 40.0%
! AGTTATGTTTCTGAGGGCAT+TGG - chr7_4:16871412-16871431 Msa1142470:CDS 40.0%
GTTGAGTTTCAACTTGGTAG+TGG - chr7_4:16871478-16871497 Msa1142470:CDS 40.0%
!! CTTGGTAGTGGTTCTTCAAT+TGG - chr7_4:16871490-16871509 Msa1142470:CDS 40.0%
GGCTCTTTGTTGATACCAAA+TGG - chr7_4:16871526-16871545 Msa1142470:CDS 40.0%
CATTGTTCACCAATGCCATT+TGG + chr7_4:16871544-16871563 None:intergenic 40.0%
!! CAAATGGCATTGGTGAACAA+TGG - chr7_4:16871542-16871561 Msa1142470:CDS 40.0%
TAGATTTGAGGATCACAAGG+TGG + chr7_4:16871910-16871929 None:intergenic 40.0%
CACTAGATTTGAGGATCACA+AGG + chr7_4:16871913-16871932 None:intergenic 40.0%
TGGATCTAGATAGATTGGGA+GGG + chr7_4:16870497-16870516 None:intergenic 40.0%
TGGGTGGATCTAGATAGATT+GGG + chr7_4:16870501-16870520 None:intergenic 40.0%
TTGGGTGGATCTAGATAGAT+TGG + chr7_4:16870502-16870521 None:intergenic 40.0%
AATACCTGTTGTGTCCAGTT+GGG + chr7_4:16870520-16870539 None:intergenic 40.0%
TAATACCTGTTGTGTCCAGT+TGG + chr7_4:16870521-16870540 None:intergenic 40.0%
CAGCAAGTAGGAATTGGTAT+TGG - chr7_4:16870857-16870876 Msa1142470:CDS 40.0%
CTTTGACATCTTAGCTCGAT+CGG + chr7_4:16870987-16871006 None:intergenic 40.0%
! CAAGTTTTGCAAAAATGGCG+TGG + chr7_4:16871106-16871125 None:intergenic 40.0%
GCAAAACTTGTCGTCGTTAT+TGG - chr7_4:16871116-16871135 Msa1142470:CDS 40.0%
! AGTTATGTTTCTGAGGGCAT+TGG - chr7_4:16871412-16871431 Msa1142470:CDS 40.0%
GTTGAGTTTCAACTTGGTAG+TGG - chr7_4:16871478-16871497 Msa1142470:CDS 40.0%
!! CTTGGTAGTGGTTCTTCAAT+TGG - chr7_4:16871490-16871509 Msa1142470:CDS 40.0%
GGCTCTTTGTTGATACCAAA+TGG - chr7_4:16871526-16871545 Msa1142470:CDS 40.0%
CATTGTTCACCAATGCCATT+TGG + chr7_4:16871544-16871563 None:intergenic 40.0%
!! CAAATGGCATTGGTGAACAA+TGG - chr7_4:16871542-16871561 Msa1142470:CDS 40.0%
TAGATTTGAGGATCACAAGG+TGG + chr7_4:16871910-16871929 None:intergenic 40.0%
CACTAGATTTGAGGATCACA+AGG + chr7_4:16871913-16871932 None:intergenic 40.0%
TCTAGATAGATTGGGAGGGA+GGG + chr7_4:16870493-16870512 None:intergenic 45.0%
ATCTAGATAGATTGGGAGGG+AGG + chr7_4:16870494-16870513 None:intergenic 45.0%
GTGGATCTAGATAGATTGGG+AGG + chr7_4:16870498-16870517 None:intergenic 45.0%
TCTATCTAGATCCACCCAAC+TGG - chr7_4:16870503-16870522 Msa1142470:three_prime_UTR 45.0%
GACATCGTTGAAGCTGATAG+CGG + chr7_4:16870908-16870927 None:intergenic 45.0%
!! ATACTGGTCTTCTAGACCCT+TGG + chr7_4:16870958-16870977 None:intergenic 45.0%
! TGTCGTCGTTATTGGACTAG+AGG - chr7_4:16871124-16871143 Msa1142470:CDS 45.0%
CATAACGATCATCTCCAGGT+CGG - chr7_4:16871244-16871263 Msa1142470:CDS 45.0%
GTCGCTATGACGATCTAAAG+AGG + chr7_4:16871389-16871408 None:intergenic 45.0%
!! TGAGGGCATTGGTTCTTTGT+TGG - chr7_4:16871423-16871442 Msa1142470:CDS 45.0%
!! ATGGCATTGGTGAACAATGG+AGG - chr7_4:16871545-16871564 Msa1142470:CDS 45.0%
CAAGGTGGTGAAGTGAAACT+AGG + chr7_4:16871895-16871914 None:intergenic 45.0%
TCTAGATAGATTGGGAGGGA+GGG + chr7_4:16870493-16870512 None:intergenic 45.0%
ATCTAGATAGATTGGGAGGG+AGG + chr7_4:16870494-16870513 None:intergenic 45.0%
GTGGATCTAGATAGATTGGG+AGG + chr7_4:16870498-16870517 None:intergenic 45.0%
TCTATCTAGATCCACCCAAC+TGG - chr7_4:16870503-16870522 Msa1142470:three_prime_UTR 45.0%
GACATCGTTGAAGCTGATAG+CGG + chr7_4:16870908-16870927 None:intergenic 45.0%
!! ATACTGGTCTTCTAGACCCT+TGG + chr7_4:16870958-16870977 None:intergenic 45.0%
! TGTCGTCGTTATTGGACTAG+AGG - chr7_4:16871124-16871143 Msa1142470:CDS 45.0%
CATAACGATCATCTCCAGGT+CGG - chr7_4:16871244-16871263 Msa1142470:CDS 45.0%
GTCGCTATGACGATCTAAAG+AGG + chr7_4:16871389-16871408 None:intergenic 45.0%
!! TGAGGGCATTGGTTCTTTGT+TGG - chr7_4:16871423-16871442 Msa1142470:CDS 45.0%
!! ATGGCATTGGTGAACAATGG+AGG - chr7_4:16871545-16871564 Msa1142470:CDS 45.0%
CAAGGTGGTGAAGTGAAACT+AGG + chr7_4:16871895-16871914 None:intergenic 45.0%
TGGATATGTGAGTGTGTGGG+TGG + chr7_4:16870421-16870440 None:intergenic 50.0%
CTAGATAGATTGGGAGGGAG+GGG + chr7_4:16870492-16870511 None:intergenic 50.0%
! GATAGCGGTTGCAAAGCTGA+TGG + chr7_4:16870893-16870912 None:intergenic 50.0%
TCTGTCACCGTTGAAGCTGA+TGG - chr7_4:16870926-16870945 Msa1142470:CDS 50.0%
GTAGCTGCCATCAGCTTCAA+CGG + chr7_4:16870936-16870955 None:intergenic 50.0%
AAGCTGATGGCAGCTACCAA+GGG - chr7_4:16870939-16870958 Msa1142470:CDS 50.0%
GCTCGATCGGTCATTGATAC+TGG + chr7_4:16870974-16870993 None:intergenic 50.0%
! CGTCGTTATTGGACTAGAGG+TGG - chr7_4:16871127-16871146 Msa1142470:CDS 50.0%
GCACTTCGAAACGTTCCTGT+TGG - chr7_4:16871151-16871170 Msa1142470:CDS 50.0%
CTTCGAAACGTTCCTGTTGG+AGG - chr7_4:16871154-16871173 Msa1142470:CDS 50.0%
CTTCTACAACCACCTCCAAC+AGG + chr7_4:16871169-16871188 None:intergenic 50.0%
CTGTTGGAGGTGGTTGTAGA+AGG - chr7_4:16871167-16871186 Msa1142470:CDS 50.0%
!! TGGTGGTTCTAGCTCAGCAA+GGG - chr7_4:16871279-16871298 Msa1142470:CDS 50.0%
TGGATATGTGAGTGTGTGGG+TGG + chr7_4:16870421-16870440 None:intergenic 50.0%
CTAGATAGATTGGGAGGGAG+GGG + chr7_4:16870492-16870511 None:intergenic 50.0%
! GATAGCGGTTGCAAAGCTGA+TGG + chr7_4:16870893-16870912 None:intergenic 50.0%
TCTGTCACCGTTGAAGCTGA+TGG - chr7_4:16870926-16870945 Msa1142470:CDS 50.0%
GTAGCTGCCATCAGCTTCAA+CGG + chr7_4:16870936-16870955 None:intergenic 50.0%
AAGCTGATGGCAGCTACCAA+GGG - chr7_4:16870939-16870958 Msa1142470:CDS 50.0%
GCTCGATCGGTCATTGATAC+TGG + chr7_4:16870974-16870993 None:intergenic 50.0%
! CGTCGTTATTGGACTAGAGG+TGG - chr7_4:16871127-16871146 Msa1142470:CDS 50.0%
GCACTTCGAAACGTTCCTGT+TGG - chr7_4:16871151-16871170 Msa1142470:CDS 50.0%
CTTCGAAACGTTCCTGTTGG+AGG - chr7_4:16871154-16871173 Msa1142470:CDS 50.0%
CTTCTACAACCACCTCCAAC+AGG + chr7_4:16871169-16871188 None:intergenic 50.0%
CTGTTGGAGGTGGTTGTAGA+AGG - chr7_4:16871167-16871186 Msa1142470:CDS 50.0%
!! TGGTGGTTCTAGCTCAGCAA+GGG - chr7_4:16871279-16871298 Msa1142470:CDS 50.0%
TCCACCCAACTGGACACAAC+AGG - chr7_4:16870513-16870532 Msa1142470:three_prime_UTR 55.0%
ACCTGTTGTGTCCAGTTGGG+TGG + chr7_4:16870517-16870536 None:intergenic 55.0%
GAAGCTGATGGCAGCTACCA+AGG - chr7_4:16870938-16870957 Msa1142470:CDS 55.0%
! GTGCTGCTGCAGCATCATTC+TGG + chr7_4:16871015-16871034 None:intergenic 55.0%
CGAAACGTTCCTGTTGGAGG+TGG - chr7_4:16871157-16871176 Msa1142470:CDS 55.0%
!! CTGGTGGTTCTAGCTCAGCA+AGG - chr7_4:16871278-16871297 Msa1142470:CDS 55.0%
TCCACCCAACTGGACACAAC+AGG - chr7_4:16870513-16870532 Msa1142470:three_prime_UTR 55.0%
ACCTGTTGTGTCCAGTTGGG+TGG + chr7_4:16870517-16870536 None:intergenic 55.0%
GAAGCTGATGGCAGCTACCA+AGG - chr7_4:16870938-16870957 Msa1142470:CDS 55.0%
! GTGCTGCTGCAGCATCATTC+TGG + chr7_4:16871015-16871034 None:intergenic 55.0%
CGAAACGTTCCTGTTGGAGG+TGG - chr7_4:16871157-16871176 Msa1142470:CDS 55.0%
!! CTGGTGGTTCTAGCTCAGCA+AGG - chr7_4:16871278-16871297 Msa1142470:CDS 55.0%
GATCATCTCCAGGTCGGTGC+CGG - chr7_4:16871250-16871269 Msa1142470:CDS 60.0%
GCTAGAACCACCAGCAGCAC+CGG + chr7_4:16871272-16871291 None:intergenic 60.0%
GATCATCTCCAGGTCGGTGC+CGG - chr7_4:16871250-16871269 Msa1142470:CDS 60.0%
GCTAGAACCACCAGCAGCAC+CGG + chr7_4:16871272-16871291 None:intergenic 60.0%
TGGGAGGGAGGGGAAGACCA+TGG + chr7_4:16870482-16870501 None:intergenic 65.0%
TGGGAGGGAGGGGAAGACCA+TGG + chr7_4:16870482-16870501 None:intergenic 65.0%
!! CAGCAGCACCGGCACCGACC+TGG + chr7_4:16871261-16871280 None:intergenic 75.0%
!! CAGGTCGGTGCCGGTGCTGC+TGG - chr7_4:16871259-16871278 Msa1142470:CDS 75.0%
!! GTCGGTGCCGGTGCTGCTGG+TGG - chr7_4:16871262-16871281 Msa1142470:CDS 75.0%
!! CAGCAGCACCGGCACCGACC+TGG + chr7_4:16871261-16871280 None:intergenic 75.0%
!! CAGGTCGGTGCCGGTGCTGC+TGG - chr7_4:16871259-16871278 Msa1142470:CDS 75.0%
!! GTCGGTGCCGGTGCTGCTGG+TGG - chr7_4:16871262-16871281 Msa1142470:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 16870352 16872234 16870352 ID=Msa1142470;Name=Msa1142470
chr7_4 mRNA 16870352 16872234 16870352 ID=Msa1142470-mRNA-1;Parent=Msa1142470;Name=Msa1142470-mRNA-1;_AED=0.00;_eAED=0.00;_QI=129|1|1|1|1|1|2|304|374
chr7_4 exon 16870352 16871726 16870352 ID=Msa1142470-mRNA-1:exon:3797;Parent=Msa1142470-mRNA-1
chr7_4 exon 16872052 16872234 16872052 ID=Msa1142470-mRNA-1:exon:3796;Parent=Msa1142470-mRNA-1
chr7_4 five_prime_UTR 16872106 16872234 16872106 ID=Msa1142470-mRNA-1:five_prime_utr;Parent=Msa1142470-mRNA-1
chr7_4 CDS 16872052 16872105 16872052 ID=Msa1142470-mRNA-1:cds;Parent=Msa1142470-mRNA-1
chr7_4 CDS 16870656 16871726 16870656 ID=Msa1142470-mRNA-1:cds;Parent=Msa1142470-mRNA-1
chr7_4 three_prime_UTR 16870352 16870655 16870352 ID=Msa1142470-mRNA-1:three_prime_utr;Parent=Msa1142470-mRNA-1
Gene Sequence

>Msa1142470

ATGGTCTTCCCCTCCCTCCCAATCTATCTAGATCCACCCAACTGGACACAACAGCAAGTAGGAATTGGTATTGGCGATCAAAATCCATCAGCTTTGCAACCGCTATCAGCTTCAACGATGTCTGTCACCGTTGAAGCTGATGGCAGCTACCAAGGGTCTAGAAGACCAGTATCAATGACCGATCGAGCTAAGATGTCAAAGATACACCAGAATGATGCTGCAGCAGCACAGAAATGTCCAAGATGTGAATCAACAAACACAAAGTTCTGTTACTACAACAACTACAATCTTTCACAACCACGCCATTTTTGCAAAACTTGTCGTCGTTATTGGACTAGAGGTGGTGCACTTCGAAACGTTCCTGTTGGAGGTGGTTGTAGAAGGAACAACAAAAGAAGAAAAAGTAATTCAGCATCAAAATCACCTCTGAAACCTAATCATAACGATCATCTCCAGGTCGGTGCCGGTGCTGCTGGTGGTTCTAGCTCAGCAAGGGCAAATTCTTCTTCTAATAATGGTTGCACTAATTCTAATGTGAATGTTGGAATGCCTCATTTTCCAACACAATTTCCATTTGTAACCTCTTTAGATCGTCATAGCGACAATAGTTATGTTTCTGAGGGCATTGGTTCTTTGTTGGCCAAAAATATGAGCAATAGTACTACAACTAATGTTGAGTTTCAACTTGGTAGTGGTTCTTCAATTGGTAATGGTAATGGTGGCTCTTTGTTGATACCAAATGGCATTGGTGAACAATGGAGGTTTCCGAATTCGCTACAAGTTCATCAACGACAATATCAACAATTCCCTTTCTTGAGTAATTTGCAACCACAAATTGGATTATTTCAATTTGGTGGAGAAAATAATGGAGAGCCACAAAGAAATTTGTTTCGGTCGAAGGAAACATATTCTTCAAGTGTTAGTATTGGAATGATGCCTCAAGTTAATACAGTTAAAGTGGAAGAAAACAATCATCAAGGTTTGAGTTTGCCAAAAAATCTCTTGAATGGTTCAGGAAATAGTAATGATCTATTTTGGAATGGAAATGGAAATGGAAGTGGTAATGAAAATGCATGGAATGAAGTTCCTAGTTTCACTTCACCACCTTGTGATCCTCAAATCTAG
Protein sequence

>Msa1142470

MVFPSLPIYLDPPNWTQQQVGIGIGDQNPSALQPLSASTMSVTVEADGSYQGSRRPVSMTDRAKMSKIHQNDAAAAQKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNNKRRKSNSASKSPLKPNHNDHLQVGAGAAGGSSSARANSSSNNGCTNSNVNVGMPHFPTQFPFVTSLDRHSDNSYVSEGIGSLLAKNMSNSTTTNVEFQLGSGSSIGNGNGGSLLIPNGIGEQWRFPNSLQVHQRQYQQFPFLSNLQPQIGLFQFGGENNGEPQRNLFRSKETYSSSVSIGMMPQVNTVKVEENNHQGLSLPKNLLNGSGNSNDLFWNGNGNGSGNENAWNEVPSFTSPPCDPQI*