Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145130 | XP_039684190.1 | 93.266 | 297 | 20 | 0 | 1 | 297 | 1 | 297 | 0.0 | 530 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145130 | sp|F4HNU8|OFP4_ARATH | 28.613 | 346 | 152 | 15 | 1 | 314 | 1 | 283 | 1.02e-15 | 80.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145130 | A0A072U1F0 | 90.228 | 307 | 20 | 1 | 1 | 297 | 1 | 307 | 0.0 | 520 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145130 | MtrunA17_Chr7g0244571 | 90.228 | 307 | 20 | 1 | 1 | 297 | 1 | 307 | 0.0 | 520 |
| Msa1145130 | MtrunA17_Chr4g0013081 | 43.490 | 384 | 117 | 17 | 1 | 314 | 1 | 354 | 4.96e-58 | 194 |
| Msa1145130 | MtrunA17_Chr3g0119351 | 72.973 | 74 | 20 | 0 | 340 | 413 | 405 | 478 | 3.32e-30 | 123 |
| Msa1145130 | MtrunA17_Chr3g0119351 | 84.091 | 44 | 7 | 0 | 295 | 338 | 149 | 192 | 8.81e-18 | 85.5 |
| Msa1145130 | MtrunA17_Chr5g0432531 | 41.176 | 170 | 83 | 6 | 128 | 297 | 60 | 212 | 9.78e-24 | 99.4 |
| Msa1145130 | MtrunA17_Chr5g0439334 | 58.228 | 79 | 28 | 1 | 340 | 413 | 379 | 457 | 2.31e-21 | 96.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1145130 | AT1G06920.1 | 28.613 | 346 | 152 | 15 | 1 | 314 | 1 | 283 | 1.04e-16 | 80.9 |
| Msa1145130 | AT2G33580.1 | 36.000 | 125 | 58 | 3 | 305 | 410 | 342 | 463 | 2.31e-15 | 78.6 |
| Msa1145130 | AT2G30400.1 | 27.586 | 348 | 162 | 12 | 1 | 314 | 1 | 292 | 3.95e-15 | 76.3 |
| Msa1145130 | AT2G23770.1 | 43.373 | 83 | 43 | 1 | 331 | 413 | 370 | 448 | 2.63e-13 | 72.0 |
| Msa1145130 | AT5G58360.1 | 25.949 | 316 | 147 | 11 | 1 | 298 | 5 | 251 | 3.34e-11 | 64.3 |
Find 62 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACGGTCTGTTCTGATTTC+TGG | 0.132362 | 7_4:-21692763 | None:intergenic |
| TTCTACAAGTTTACTGATAA+TGG | 0.203217 | 7_4:+21698091 | Msa1145130:CDS |
| AATGATGAACACAACGTTAA+AGG | 0.235673 | 7_4:+21692988 | Msa1145130:CDS |
| TTCTTCCTTTGTTGTGTTGT+TGG | 0.243928 | 7_4:-21692490 | None:intergenic |
| ACCAACATTACAAGACTATC+TGG | 0.292649 | 7_4:+21698037 | Msa1145130:CDS |
| ATTGATGCTCAGAATATATA+TGG | 0.310047 | 7_4:+21697686 | Msa1145130:CDS |
| TGAAGATTCTATTGCTTGTT+TGG | 0.331737 | 7_4:-21692612 | None:intergenic |
| TTTGTTGTGTTGTTGGTGTT+TGG | 0.367246 | 7_4:-21692483 | None:intergenic |
| ATTCAAAGCATCAGCAAATT+CGG | 0.386438 | 7_4:-21698193 | None:intergenic |
| GAGAGGTAATGGGAAATTAC+AGG | 0.389366 | 7_4:+21692392 | None:intergenic |
| ATGATGAACACAACGTTAAA+GGG | 0.389606 | 7_4:+21692989 | Msa1145130:CDS |
| TCTCAAAGGTGGTGTCTCTA+TGG | 0.390419 | 7_4:+21697985 | Msa1145130:CDS |
| TACGTCTTCCACCATCGTTT+CGG | 0.400519 | 7_4:+21693164 | Msa1145130:CDS |
| CCATCGTTTCGGCTGGCAAC+CGG | 0.420330 | 7_4:+21693175 | Msa1145130:CDS |
| CTATGGAGATGAACACTCTA+AGG | 0.422917 | 7_4:+21698002 | Msa1145130:CDS |
| AGTAAACTTGTAGAAAAGAT+AGG | 0.427499 | 7_4:-21698083 | None:intergenic |
| GATTCACAAACCTCGCTTCA+AGG | 0.438150 | 7_4:+21697708 | Msa1145130:CDS |
| GTTCACCAGGTGTGAAACTT+AGG | 0.443025 | 7_4:+21693088 | Msa1145130:CDS |
| TCTGTTCTGATTTCTGGCTC+AGG | 0.447190 | 7_4:-21692757 | None:intergenic |
| TAAACTCTGTGGCACTAACT+TGG | 0.449308 | 7_4:+21698149 | Msa1145130:CDS |
| TCTGGTTTGGTCACAATTGG+TGG | 0.452293 | 7_4:-21692898 | None:intergenic |
| TGGCAACCGGAGAAGTCTTT+CGG | 0.457447 | 7_4:+21693188 | Msa1145130:CDS |
| TTTCTTGGATTGCTTTGGTA+GGG | 0.457667 | 7_4:-21692562 | None:intergenic |
| ACATGTTGTGAGTGCCTCAT+AGG | 0.467781 | 7_4:-21697657 | None:intergenic |
| GGAGATGATGATGAAGTCTT+TGG | 0.474574 | 7_4:-21692691 | None:intergenic |
| TGCCACAGAGTTTAAGCACT+TGG | 0.478629 | 7_4:-21698140 | None:intergenic |
| CAGACATGATGCCTAATGCT+TGG | 0.484513 | 7_4:+21692425 | Msa1145130:CDS |
| CCCAGATAGTCTTGTAATGT+TGG | 0.485149 | 7_4:-21698038 | None:intergenic |
| TTTGATGATGATATTCTTGG+TGG | 0.485239 | 7_4:-21692643 | None:intergenic |
| CTGTTCTGATTTCTGGCTCA+GGG | 0.485970 | 7_4:-21692756 | None:intergenic |
| AGCTTGTAAAACCAAGCATT+AGG | 0.493200 | 7_4:-21692436 | None:intergenic |
| AGATTCTCTGTTAGTTCACC+AGG | 0.512695 | 7_4:+21693075 | Msa1145130:CDS |
| GAGTGCCTCATAGGTGTTGT+TGG | 0.512772 | 7_4:-21697648 | None:intergenic |
| AGGAGATTTCAGAGAATCAA+TGG | 0.515867 | 7_4:+21693248 | Msa1145130:CDS |
| ATTCACCAAGAATTTCAAAC+CGG | 0.519789 | 7_4:+21693115 | Msa1145130:CDS |
| TCTTCCACCATCGTTTCGGC+TGG | 0.529072 | 7_4:+21693168 | Msa1145130:CDS |
| CTATCAAGTGGAGAATCAAA+TGG | 0.529685 | 7_4:-21692712 | None:intergenic |
| CTAACAGAGAATCTTCTACT+TGG | 0.532521 | 7_4:-21693066 | None:intergenic |
| TGAGGCACTCACAACATGTC+AGG | 0.542169 | 7_4:+21697661 | Msa1145130:CDS |
| TCTTGCCAACAACACCTATG+AGG | 0.544691 | 7_4:+21697643 | Msa1145130:CDS |
| GGAAAATTCAAACACATGGC+CGG | 0.552191 | 7_4:+21693136 | Msa1145130:CDS |
| AACTATCCGAAAGACTTCTC+CGG | 0.559644 | 7_4:-21693194 | None:intergenic |
| AAACACCAACAACACAACAA+AGG | 0.563217 | 7_4:+21692485 | Msa1145130:CDS |
| TCGATTATGATGTCGTTCGT+CGG | 0.569783 | 7_4:-21692793 | None:intergenic |
| TGCAGTAAGGTTCTCAAAGG+TGG | 0.582548 | 7_4:+21697974 | Msa1145130:intron |
| GTTGCCAGCCGAAACGATGG+TGG | 0.586748 | 7_4:-21693172 | None:intergenic |
| TCAATTTGCATGTTCCACTC+AGG | 0.587658 | 7_4:+21697732 | Msa1145130:CDS |
| GATTCTCTGAAATCTCCTTG+TGG | 0.590560 | 7_4:-21693243 | None:intergenic |
| CCGGTTGCCAGCCGAAACGA+TGG | 0.591822 | 7_4:-21693175 | None:intergenic |
| CCAACATTACAAGACTATCT+GGG | 0.600008 | 7_4:+21698038 | Msa1145130:CDS |
| AACCGGAAAATTCAAACACA+TGG | 0.611341 | 7_4:+21693132 | Msa1145130:CDS |
| GATTCTGCAGAGCTATCAAG+TGG | 0.613063 | 7_4:-21692724 | None:intergenic |
| TACCAAGTGCTTAAACTCTG+TGG | 0.616015 | 7_4:+21698138 | Msa1145130:CDS |
| GCAAATTGAGCCTTGAAGCG+AGG | 0.617393 | 7_4:-21697718 | None:intergenic |
| TTCTGCAGTAAGGTTCTCAA+AGG | 0.630600 | 7_4:+21697971 | Msa1145130:intron |
| TTGATCCTAAGTTTCACACC+TGG | 0.631177 | 7_4:-21693093 | None:intergenic |
| ATAGTCTTGTAATGTTGGTG+TGG | 0.652410 | 7_4:-21698033 | None:intergenic |
| AGATTTCAGAGAATCAATGG+TGG | 0.652480 | 7_4:+21693251 | Msa1145130:CDS |
| AAGTCATCATTGAATCCACA+AGG | 0.674680 | 7_4:+21693228 | Msa1145130:CDS |
| ATGGACCAAGCACACCTGAG+TGG | 0.688523 | 7_4:-21697746 | None:intergenic |
| TCTGGGTTCTGTGTACACAA+AGG | 0.691227 | 7_4:+21698055 | Msa1145130:CDS |
| CGTTCGTCGGAAGAAGAACA+CGG | 0.706093 | 7_4:-21692780 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATAAATATATTTTTTTAA+GGG | + | chr7_4:21695166-21695185 | Msa1145130:intron | 0.0% |
| !! | TAAATATATTTACGTAAAAA+TGG | - | chr7_4:21694033-21694052 | None:intergenic | 10.0% |
| !!! | ATTTTTATCTTCTAATAATT+TGG | + | chr7_4:21694509-21694528 | Msa1145130:intron | 10.0% |
| !! | ATTTATATGAATCAATATTT+CGG | - | chr7_4:21695154-21695173 | None:intergenic | 10.0% |
| !!! | TTAGTAAATTTTAACTTTTT+AGG | + | chr7_4:21695858-21695877 | Msa1145130:intron | 10.0% |
| !!! | TAAATGATATTAAATGTTTT+GGG | - | chr7_4:21695911-21695930 | None:intergenic | 10.0% |
| !!! | TTAAATGATATTAAATGTTT+TGG | - | chr7_4:21695912-21695931 | None:intergenic | 10.0% |
| !!! | ATTTTATGTATTCAAATTAA+AGG | + | chr7_4:21696972-21696991 | Msa1145130:intron | 10.0% |
| !! | TTTCAATTCTTTACTTAAAA+TGG | + | chr7_4:21693626-21693645 | Msa1145130:intron | 15.0% |
| !!! | GTATTTTGTCAAAAAAAAAA+TGG | + | chr7_4:21693728-21693747 | Msa1145130:intron | 15.0% |
| !! | TAAGAATAAGAAATAAAAAG+TGG | + | chr7_4:21694850-21694869 | Msa1145130:intron | 15.0% |
| !!! | AATCTAGTGTATTTTTTTTA+CGG | + | chr7_4:21695396-21695415 | Msa1145130:intron | 15.0% |
| !! | ATTGTATTTCTTAACATATA+TGG | - | chr7_4:21695490-21695509 | None:intergenic | 15.0% |
| !! | AATTAAATAATTGAAAGAAG+AGG | + | chr7_4:21695582-21695601 | Msa1145130:intron | 15.0% |
| !! | ATTAAATAATTGAAAGAAGA+GGG | + | chr7_4:21695583-21695602 | Msa1145130:intron | 15.0% |
| !!! | TAAGCAAATTTTTACATTTT+AGG | - | chr7_4:21695805-21695824 | None:intergenic | 15.0% |
| !! | AAAATTATTAACCTAAATGT+TGG | + | chr7_4:21696040-21696059 | Msa1145130:intron | 15.0% |
| !!! | AATCCATATTTAAAATTTGA+AGG | + | chr7_4:21696533-21696552 | Msa1145130:intron | 15.0% |
| !!! | ATACCTTCAAATTTTAAATA+TGG | - | chr7_4:21696539-21696558 | None:intergenic | 15.0% |
| !! | TTCTTTACTTAAAATGGAAA+AGG | + | chr7_4:21693632-21693651 | Msa1145130:intron | 20.0% |
| !! | AATTTAATGTAGAATGTCAA+AGG | + | chr7_4:21693684-21693703 | Msa1145130:intron | 20.0% |
| !! | TGTCAAAAAAAAAATGGAAT+TGG | + | chr7_4:21693734-21693753 | Msa1145130:intron | 20.0% |
| !! | CTATAACTTAGTCTAAATTA+GGG | - | chr7_4:21693787-21693806 | None:intergenic | 20.0% |
| !! | ACTATAACTTAGTCTAAATT+AGG | - | chr7_4:21693788-21693807 | None:intergenic | 20.0% |
| !!! | TAAGTTATAGTTGATACATA+TGG | + | chr7_4:21693797-21693816 | Msa1145130:intron | 20.0% |
| !! | AATAAGAAATAAAAAGTGGT+GGG | + | chr7_4:21694854-21694873 | Msa1145130:intron | 20.0% |
| !! | CAAAGAAAAAACAAAAAATG+TGG | - | chr7_4:21695099-21695118 | None:intergenic | 20.0% |
| !!! | TAAAAAGAACTTCTTTTTAG+AGG | - | chr7_4:21695462-21695481 | None:intergenic | 20.0% |
| !! | ATTTCTTAACATATATGGAA+TGG | - | chr7_4:21695485-21695504 | None:intergenic | 20.0% |
| !! | AAGTAAATATTTACTCCTTT+AGG | - | chr7_4:21695837-21695856 | None:intergenic | 20.0% |
| !!! | TTTTTAGGTTCATTCTATAA+AGG | + | chr7_4:21695873-21695892 | Msa1145130:intron | 20.0% |
| !! | TCATTCTATAAAGGATTATT+TGG | + | chr7_4:21695882-21695901 | Msa1145130:intron | 20.0% |
| !!! | AGTTCTTTTTGAACTATATT+TGG | + | chr7_4:21696100-21696119 | Msa1145130:intron | 20.0% |
| !!! | ATTTTTTTGGAAGCATTATA+AGG | - | chr7_4:21696312-21696331 | None:intergenic | 20.0% |
| !! | ATAAGCACTATAATTTAATC+AGG | + | chr7_4:21696741-21696760 | Msa1145130:intron | 20.0% |
| !! | ATTTAATGCCATATAATGTA+TGG | + | chr7_4:21696909-21696928 | Msa1145130:intron | 20.0% |
| !! | TTTAATGCCATATAATGTAT+GGG | + | chr7_4:21696910-21696929 | Msa1145130:intron | 20.0% |
| !!! | TGTTTCTTTTCTTTTTTCAT+AGG | + | chr7_4:21696999-21697018 | Msa1145130:intron | 20.0% |
| !!! | GTTTCTTTTCTTTTTTCATA+GGG | + | chr7_4:21697000-21697019 | Msa1145130:intron | 20.0% |
| !! | TTACATTGGTATATATGAAA+TGG | - | chr7_4:21697037-21697056 | None:intergenic | 20.0% |
| !! | GTAAAGTAGTAAGATTTTCT+TGG | - | chr7_4:21692580-21692599 | None:intergenic | 25.0% |
| !!! | TGTTTTGATGATGATATTCT+TGG | - | chr7_4:21692649-21692668 | None:intergenic | 25.0% |
| !! | TTTGATGAATTTTTGCTTCT+GGG | - | chr7_4:21692970-21692989 | None:intergenic | 25.0% |
| !! | ATTTGATGAATTTTTGCTTC+TGG | - | chr7_4:21692971-21692990 | None:intergenic | 25.0% |
| !! | ACTAAAAGTCAAGATTTTGA+AGG | + | chr7_4:21693014-21693033 | Msa1145130:CDS | 25.0% |
| !! | AGAATTGTTCTACTGATTAT+CGG | - | chr7_4:21693409-21693428 | None:intergenic | 25.0% |
| !! | GAAAACAAAATCACGAATTT+TGG | - | chr7_4:21694581-21694600 | None:intergenic | 25.0% |
| ! | AACTTAAGAAAGTGAAAACT+TGG | - | chr7_4:21694651-21694670 | None:intergenic | 25.0% |
| ! | GAATAAGAAATAAAAAGTGG+TGG | + | chr7_4:21694853-21694872 | Msa1145130:intron | 25.0% |
| ! | ATAAGAAATAAAAAGTGGTG+GGG | + | chr7_4:21694855-21694874 | Msa1145130:intron | 25.0% |
| ! | TGTTGGAAATTGAAAAAAAG+TGG | + | chr7_4:21694954-21694973 | Msa1145130:intron | 25.0% |
| ! | GTTGGAAATTGAAAAAAAGT+GGG | + | chr7_4:21694955-21694974 | Msa1145130:intron | 25.0% |
| ! | GAGGGAGAAATAAAAAAAAT+TGG | + | chr7_4:21695601-21695620 | Msa1145130:intron | 25.0% |
| ! | AGTAATATTCACGTACAAAA+TGG | - | chr7_4:21695643-21695662 | None:intergenic | 25.0% |
| ! | TTTGTACTTTCTTTAATTCC+TGG | - | chr7_4:21696023-21696042 | None:intergenic | 25.0% |
| ! | AAAATCAACCAATGAAAGTA+AGG | + | chr7_4:21696129-21696148 | Msa1145130:intron | 25.0% |
| !!! | CAACTTGCTCATAATTTTTT+TGG | - | chr7_4:21696325-21696344 | None:intergenic | 25.0% |
| !! | AGATTTTAGACAAATTCTGT+CGG | - | chr7_4:21696387-21696406 | None:intergenic | 25.0% |
| ! | ATTTGACAAAAAGCTGAAAA+AGG | - | chr7_4:21696465-21696484 | None:intergenic | 25.0% |
| ! | TAAACTTAAATGAGTTTACG+AGG | + | chr7_4:21696593-21696612 | Msa1145130:intron | 25.0% |
| ! | CATAGAATTGAGCATAATAT+TGG | - | chr7_4:21696664-21696683 | None:intergenic | 25.0% |
| ! | TATTATGCTCAATTCTATGA+TGG | + | chr7_4:21696665-21696684 | Msa1145130:intron | 25.0% |
| ! | TTATCATCCCATACATTATA+TGG | - | chr7_4:21696920-21696939 | None:intergenic | 25.0% |
| ! | AAATAAGATTACACAATGCA+TGG | - | chr7_4:21696956-21696975 | None:intergenic | 25.0% |
| !!! | ACATTAGTTTGTTATGTTGT+GGG | - | chr7_4:21697087-21697106 | None:intergenic | 25.0% |
| !!! | AACATTAGTTTGTTATGTTG+TGG | - | chr7_4:21697088-21697107 | None:intergenic | 25.0% |
| ! | ACAAACTAATGTTTGAATTC+CGG | + | chr7_4:21697095-21697114 | Msa1145130:intron | 25.0% |
| ! | ACATATTCAATGAGAATCAT+GGG | + | chr7_4:21697237-21697256 | Msa1145130:intron | 25.0% |
| ! | ATTGATGCTCAGAATATATA+TGG | + | chr7_4:21697686-21697705 | Msa1145130:CDS | 25.0% |
| ! | AGTAAACTTGTAGAAAAGAT+AGG | - | chr7_4:21698086-21698105 | None:intergenic | 25.0% |
| ! | TTCTACAAGTTTACTGATAA+TGG | + | chr7_4:21698091-21698110 | Msa1145130:CDS | 25.0% |
| ! | TTTTACAAGCTTAGAGACAT+GGG | + | chr7_4:21692448-21692467 | Msa1145130:CDS | 30.0% |
| ! | AAGATTTTCTTGGATTGCTT+TGG | - | chr7_4:21692570-21692589 | None:intergenic | 30.0% |
| TGAAGATTCTATTGCTTGTT+TGG | - | chr7_4:21692615-21692634 | None:intergenic | 30.0% | |
| !! | TTTGATGATGATATTCTTGG+TGG | - | chr7_4:21692646-21692665 | None:intergenic | 30.0% |
| ! | ATCAAGTAGTTGAACTTTTC+TGG | - | chr7_4:21692919-21692938 | None:intergenic | 30.0% |
| AATGATGAACACAACGTTAA+AGG | + | chr7_4:21692988-21693007 | Msa1145130:CDS | 30.0% | |
| ATGATGAACACAACGTTAAA+GGG | + | chr7_4:21692989-21693008 | Msa1145130:CDS | 30.0% | |
| ATTCACCAAGAATTTCAAAC+CGG | + | chr7_4:21693115-21693134 | Msa1145130:CDS | 30.0% | |
| !! | ATTTTCCGGTTTGAAATTCT+TGG | - | chr7_4:21693123-21693142 | None:intergenic | 30.0% |
| GAACAACATTAGAACATCAA+AGG | + | chr7_4:21693287-21693306 | Msa1145130:intron | 30.0% | |
| CATTAGAACATCAAAGGATT+TGG | + | chr7_4:21693293-21693312 | Msa1145130:intron | 30.0% | |
| ACTCATCTGAATTCAAAGAA+AGG | - | chr7_4:21693338-21693357 | None:intergenic | 30.0% | |
| ! | TCAAAGTGTTCAAGCAAATA+TGG | + | chr7_4:21693373-21693392 | Msa1145130:intron | 30.0% |
| !! | AATGTCAAAGGTGTTTGTAA+TGG | + | chr7_4:21693696-21693715 | Msa1145130:intron | 30.0% |
| !! | AAAGGTGTTTGTAATGGAAT+TGG | + | chr7_4:21693702-21693721 | Msa1145130:intron | 30.0% |
| ! | GTAGACAAATATAGTTGATG+CGG | + | chr7_4:21693883-21693902 | Msa1145130:intron | 30.0% |
| ACAATATAAAAAGAGCCAAG+AGG | + | chr7_4:21694188-21694207 | Msa1145130:intron | 30.0% | |
| CAATATAAAAAGAGCCAAGA+GGG | + | chr7_4:21694189-21694208 | Msa1145130:intron | 30.0% | |
| TCTTAATAAAAGAGCCAAGA+GGG | + | chr7_4:21694257-21694276 | Msa1145130:intron | 30.0% | |
| ATTCAACAAGCCATTGTAAA+TGG | - | chr7_4:21694355-21694374 | None:intergenic | 30.0% | |
| TTTCTCTACAAATAGAGACT+TGG | + | chr7_4:21694597-21694616 | Msa1145130:intron | 30.0% | |
| ! | ATTCAATTTTACCTCTCCAA+TGG | - | chr7_4:21694899-21694918 | None:intergenic | 30.0% |
| ATTGGAGAGGTAAAATTGAA+TGG | + | chr7_4:21694898-21694917 | Msa1145130:intron | 30.0% | |
| TTGGAGAGGTAAAATTGAAT+GGG | + | chr7_4:21694899-21694918 | Msa1145130:intron | 30.0% | |
| TTAAGAGAGAGAAAATGATG+TGG | + | chr7_4:21694929-21694948 | Msa1145130:intron | 30.0% | |
| GTTGCACAATCTTAAACTAT+AGG | - | chr7_4:21695036-21695055 | None:intergenic | 30.0% | |
| ! | ATGTGGATTGATTATCACTT+GGG | - | chr7_4:21695082-21695101 | None:intergenic | 30.0% |
| ! | AATGTGGATTGATTATCACT+TGG | - | chr7_4:21695083-21695102 | None:intergenic | 30.0% |
| CCTATTAGATTTCCAACTTA+CGG | + | chr7_4:21695332-21695351 | Msa1145130:intron | 30.0% | |
| !!! | GTATTTTTTTTACGGAGCTT+TGG | + | chr7_4:21695404-21695423 | Msa1145130:intron | 30.0% |
| TGCTTATAATTGAGACCTAA+AGG | + | chr7_4:21695819-21695838 | Msa1145130:intron | 30.0% | |
| CAAATCTTTGTCCAACATTT+AGG | - | chr7_4:21696054-21696073 | None:intergenic | 30.0% | |
| TGAAAATGCCTTACTTTCAT+TGG | - | chr7_4:21696140-21696159 | None:intergenic | 30.0% | |
| GAAGTTGACAAAAAAACATG+AGG | - | chr7_4:21696285-21696304 | None:intergenic | 30.0% | |
| ATCAAGAGCTGAAGTTATTA+AGG | - | chr7_4:21696351-21696370 | None:intergenic | 30.0% | |
| AAAGCTGAAAAAGGTAGATA+AGG | - | chr7_4:21696456-21696475 | None:intergenic | 30.0% | |
| ! | AGCTTTTGATCAAACTATGA+GGG | - | chr7_4:21696488-21696507 | None:intergenic | 30.0% |
| ! | AAGCTTTTGATCAAACTATG+AGG | - | chr7_4:21696489-21696508 | None:intergenic | 30.0% |
| ! | GTGCTTATGTTGTTTAATAG+TGG | - | chr7_4:21696729-21696748 | None:intergenic | 30.0% |
| TTGCTAGACTCAATTTACAT+TGG | - | chr7_4:21697051-21697070 | None:intergenic | 30.0% | |
| TAATATCACATCAAACGCAA+TGG | + | chr7_4:21697130-21697149 | Msa1145130:intron | 30.0% | |
| TATAGAAAATGTGCTTAGTG+CGG | + | chr7_4:21697157-21697176 | Msa1145130:intron | 30.0% | |
| CACATATTCAATGAGAATCA+TGG | + | chr7_4:21697236-21697255 | Msa1145130:intron | 30.0% | |
| ! | AATGAGAATCATGGGTTATT+GGG | + | chr7_4:21697245-21697264 | Msa1145130:intron | 30.0% |
| TTACCATATGAATAGTTGGA+GGG | - | chr7_4:21697379-21697398 | None:intergenic | 30.0% | |
| ATTACCATATGAATAGTTGG+AGG | - | chr7_4:21697380-21697399 | None:intergenic | 30.0% | |
| TCAAGAGATAAGATAAGCTA+TGG | - | chr7_4:21697460-21697479 | None:intergenic | 30.0% | |
| ! | ATCTGAAATATTGTTGGCAT+TGG | - | chr7_4:21697504-21697523 | None:intergenic | 30.0% |
| AATGCCAACAATATTTCAGA+TGG | + | chr7_4:21697503-21697522 | Msa1145130:intron | 30.0% | |
| !!! | CATAAGACAACTAGCTTTTT+TGG | + | chr7_4:21697891-21697910 | Msa1145130:intron | 30.0% |
| AGCTTGTAAAACCAAGCATT+AGG | - | chr7_4:21692439-21692458 | None:intergenic | 35.0% | |
| ! | GTTTTACAAGCTTAGAGACA+TGG | + | chr7_4:21692447-21692466 | Msa1145130:CDS | 35.0% |
| ! | TTTGTTGTGTTGTTGGTGTT+TGG | - | chr7_4:21692486-21692505 | None:intergenic | 35.0% |
| AAACACCAACAACACAACAA+AGG | + | chr7_4:21692485-21692504 | Msa1145130:CDS | 35.0% | |
| ! | TTCTTCCTTTGTTGTGTTGT+TGG | - | chr7_4:21692493-21692512 | None:intergenic | 35.0% |
| TTTCTTGGATTGCTTTGGTA+GGG | - | chr7_4:21692565-21692584 | None:intergenic | 35.0% | |
| ! | TTTTCTTGGATTGCTTTGGT+AGG | - | chr7_4:21692566-21692585 | None:intergenic | 35.0% |
| !!! | GTCTTTGGTGTTCTTCTTTT+TGG | - | chr7_4:21692679-21692698 | None:intergenic | 35.0% |
| CTATCAAGTGGAGAATCAAA+TGG | - | chr7_4:21692715-21692734 | None:intergenic | 35.0% | |
| !!! | TTTTCTGGTTTGGTCACAAT+TGG | - | chr7_4:21692904-21692923 | None:intergenic | 35.0% |
| !!! | GTAGTTGAACTTTTCTGGTT+TGG | - | chr7_4:21692914-21692933 | None:intergenic | 35.0% |
| !! | AGATTTTGAAGGAAGAACAG+AGG | + | chr7_4:21693025-21693044 | Msa1145130:CDS | 35.0% |
| CTAACAGAGAATCTTCTACT+TGG | - | chr7_4:21693069-21693088 | None:intergenic | 35.0% | |
| AACCGGAAAATTCAAACACA+TGG | + | chr7_4:21693132-21693151 | Msa1145130:CDS | 35.0% | |
| AAGTCATCATTGAATCCACA+AGG | + | chr7_4:21693228-21693247 | Msa1145130:CDS | 35.0% | |
| AGGAGATTTCAGAGAATCAA+TGG | + | chr7_4:21693248-21693267 | Msa1145130:CDS | 35.0% | |
| AGATTTCAGAGAATCAATGG+TGG | + | chr7_4:21693251-21693270 | Msa1145130:CDS | 35.0% | |
| CTCAAGATCGACTAATCAAA+GGG | + | chr7_4:21693451-21693470 | Msa1145130:intron | 35.0% | |
| TCAAGATCGACTAATCAAAG+GGG | + | chr7_4:21693452-21693471 | Msa1145130:intron | 35.0% | |
| TGGAATTGGACTGTATGTAA+TGG | + | chr7_4:21693748-21693767 | Msa1145130:intron | 35.0% | |
| AAGACAAACTAACTGAATCC+AGG | - | chr7_4:21694241-21694260 | None:intergenic | 35.0% | |
| GTCTTAATAAAAGAGCCAAG+AGG | + | chr7_4:21694256-21694275 | Msa1145130:intron | 35.0% | |
| AAGACAAACTAACTGAATCC+AGG | - | chr7_4:21694241-21694260 | None:intergenic | 35.0% | |
| CTCAGTAAGACCATTTACAA+TGG | + | chr7_4:21694342-21694361 | Msa1145130:intron | 35.0% | |
| CATGTTGAAACCATTGTAGA+TGG | + | chr7_4:21694386-21694405 | Msa1145130:intron | 35.0% | |
| TCTTCAACAACCATCTACAA+TGG | - | chr7_4:21694399-21694418 | None:intergenic | 35.0% | |
| AAGATGATGTGGATGAAAGA+GGG | + | chr7_4:21694415-21694434 | Msa1145130:intron | 35.0% | |
| GAGACTTGGATCATTTGATT+TGG | + | chr7_4:21694611-21694630 | Msa1145130:intron | 35.0% | |
| ! | AAATAAAAAGTGGTGGGGTA+GGG | + | chr7_4:21694860-21694879 | Msa1145130:intron | 35.0% |
| TTGAATGAAAACCATTGGAG+AGG | + | chr7_4:21694885-21694904 | Msa1145130:intron | 35.0% | |
| !! | TGAAAAAAAGTGGGTGTTGA+AGG | + | chr7_4:21694964-21694983 | Msa1145130:intron | 35.0% |
| !! | GAAAAAAAGTGGGTGTTGAA+GGG | + | chr7_4:21694965-21694984 | Msa1145130:intron | 35.0% |
| AAGGGAAAAACCATTGTACA+TGG | + | chr7_4:21694994-21695013 | Msa1145130:intron | 35.0% | |
| TGTTGCCTCTATTGTCTTAA+TGG | + | chr7_4:21695127-21695146 | Msa1145130:intron | 35.0% | |
| AAGTTGGAAATCTAATAGGC+TGG | - | chr7_4:21695331-21695350 | None:intergenic | 35.0% | |
| ! | CCGTAAGTTGGAAATCTAAT+AGG | - | chr7_4:21695335-21695354 | None:intergenic | 35.0% |
| ATGATCATTTCACCGTAAGT+TGG | - | chr7_4:21695347-21695366 | None:intergenic | 35.0% | |
| CTAGATTCCAAAGCTGTAAA+TGG | - | chr7_4:21695383-21695402 | None:intergenic | 35.0% | |
| AGATTCCAATATACTCTCGT+TGG | + | chr7_4:21695702-21695721 | Msa1145130:intron | 35.0% | |
| ! | TAAGACCAACGAGAGTATAT+TGG | - | chr7_4:21695710-21695729 | None:intergenic | 35.0% |
| ATTATCAAGTTCAAGGTGGT+TGG | - | chr7_4:21695950-21695969 | None:intergenic | 35.0% | |
| AACGAGGATTATCAAGTTCA+AGG | - | chr7_4:21695957-21695976 | None:intergenic | 35.0% | |
| ! | TTGAACTTGATAATCCTCGT+TGG | + | chr7_4:21695956-21695975 | Msa1145130:intron | 35.0% |
| AAATAATCTTTAGACACGCC+AGG | + | chr7_4:21696002-21696021 | Msa1145130:intron | 35.0% | |
| AAGAGTTTGCGAATTGAAGA+TGG | - | chr7_4:21696232-21696251 | None:intergenic | 35.0% | |
| GCAAACTCAGAAAAACCATT+TGG | - | chr7_4:21696434-21696453 | None:intergenic | 35.0% | |
| !! | AATAGTGGAGAGTATTAGAG+CGG | - | chr7_4:21696714-21696733 | None:intergenic | 35.0% |
| ! | TCAAGGTTAATTAAGAGCAC+TGG | + | chr7_4:21696846-21696865 | Msa1145130:intron | 35.0% |
| !! | CAAGGTTAATTAAGAGCACT+GGG | + | chr7_4:21696847-21696866 | Msa1145130:intron | 35.0% |
| GTTTGATGTGATATTAACCG+CGG | - | chr7_4:21697126-21697145 | None:intergenic | 35.0% | |
| ATAGAAAATGTGCTTAGTGC+GGG | + | chr7_4:21697158-21697177 | Msa1145130:intron | 35.0% | |
| ! | CAATGAGAATCATGGGTTAT+TGG | + | chr7_4:21697244-21697263 | Msa1145130:intron | 35.0% |
| !! | AGATTTTGTTTGTGGGATGT+GGG | - | chr7_4:21697314-21697333 | None:intergenic | 35.0% |
| !! | CTTGCTGAGATTTTGTTTGT+GGG | - | chr7_4:21697321-21697340 | None:intergenic | 35.0% |
| !! | TCTTGCTGAGATTTTGTTTG+TGG | - | chr7_4:21697322-21697341 | None:intergenic | 35.0% |
| TACCATATGAATAGTTGGAG+GGG | - | chr7_4:21697378-21697397 | None:intergenic | 35.0% | |
| !! | TTGAGTAGGGTTTGATTTGA+AGG | - | chr7_4:21697421-21697440 | None:intergenic | 35.0% |
| CTGGAATGTTGTATTGAGTA+GGG | - | chr7_4:21697434-21697453 | None:intergenic | 35.0% | |
| AGAGATAAGATAAGCTATGG+TGG | - | chr7_4:21697457-21697476 | None:intergenic | 35.0% | |
| ! | GTCTCCATCTGAAATATTGT+TGG | - | chr7_4:21697510-21697529 | None:intergenic | 35.0% |
| ! | ATTTTCCATTTGCTTGGAGA+TGG | - | chr7_4:21697768-21697787 | None:intergenic | 35.0% |
| ATCTCCAAGCAAATGGAAAA+TGG | + | chr7_4:21697767-21697786 | Msa1145130:intron | 35.0% | |
| ! | GAATCCATTTTCCATTTGCT+TGG | - | chr7_4:21697774-21697793 | None:intergenic | 35.0% |
| CTTACATACTTGATCTCTGA+AGG | + | chr7_4:21697803-21697822 | Msa1145130:intron | 35.0% | |
| ! | TGAACTTATTGCTGAGCTTT+TGG | + | chr7_4:21697839-21697858 | Msa1145130:intron | 35.0% |
| GTTGACAGTGTATAACTTTG+AGG | + | chr7_4:21697863-21697882 | Msa1145130:intron | 35.0% | |
| TGGTGAAGCTAAGAGAATAA+AGG | + | chr7_4:21697911-21697930 | Msa1145130:intron | 35.0% | |
| GGTGAAGCTAAGAGAATAAA+GGG | + | chr7_4:21697912-21697931 | Msa1145130:intron | 35.0% | |
| !! | ATAGTCTTGTAATGTTGGTG+TGG | - | chr7_4:21698036-21698055 | None:intergenic | 35.0% |
| ACCAACATTACAAGACTATC+TGG | + | chr7_4:21698037-21698056 | Msa1145130:CDS | 35.0% | |
| CCAACATTACAAGACTATCT+GGG | + | chr7_4:21698038-21698057 | Msa1145130:CDS | 35.0% | |
| ! | GGAGATGATGATGAAGTCTT+TGG | - | chr7_4:21692694-21692713 | None:intergenic | 40.0% |
| TCGATTATGATGTCGTTCGT+CGG | - | chr7_4:21692796-21692815 | None:intergenic | 40.0% | |
| AGATTCTCTGTTAGTTCACC+AGG | + | chr7_4:21693075-21693094 | Msa1145130:CDS | 40.0% | |
| TTGATCCTAAGTTTCACACC+TGG | - | chr7_4:21693096-21693115 | None:intergenic | 40.0% | |
| ! | GGCCATGTGTTTGAATTTTC+CGG | - | chr7_4:21693137-21693156 | None:intergenic | 40.0% |
| GGAAAATTCAAACACATGGC+CGG | + | chr7_4:21693136-21693155 | Msa1145130:CDS | 40.0% | |
| AACTATCCGAAAGACTTCTC+CGG | - | chr7_4:21693197-21693216 | None:intergenic | 40.0% | |
| !! | GATTCTCTGAAATCTCCTTG+TGG | - | chr7_4:21693246-21693265 | None:intergenic | 40.0% |
| TCGATCTTGAGCGAAATACA+GGG | - | chr7_4:21693442-21693461 | None:intergenic | 40.0% | |
| GCTCAAGATCGACTAATCAA+AGG | + | chr7_4:21693450-21693469 | Msa1145130:intron | 40.0% | |
| ATTAAATGTGACCCCACTAG+TGG | - | chr7_4:21693492-21693511 | None:intergenic | 40.0% | |
| GATGGTTGTTGAAGATGATG+TGG | + | chr7_4:21694404-21694423 | Msa1145130:intron | 40.0% | |
| GAAGATGATGTGGATGAAAG+AGG | + | chr7_4:21694414-21694433 | Msa1145130:intron | 40.0% | |
| GGATTCAACATGTTGAAAGC+TGG | + | chr7_4:21694446-21694465 | Msa1145130:intron | 40.0% | |
| ! | GAAATAAAAAGTGGTGGGGT+AGG | + | chr7_4:21694859-21694878 | Msa1145130:intron | 40.0% |
| !! | GGGTGTTGAATGAAAACCAT+TGG | + | chr7_4:21694880-21694899 | Msa1145130:intron | 40.0% |
| GAGAAAATGATGTGGAGTGT+TGG | + | chr7_4:21694937-21694956 | Msa1145130:intron | 40.0% | |
| ACCATTGTACATGGTCTAAG+TGG | + | chr7_4:21695003-21695022 | Msa1145130:intron | 40.0% | |
| TCCACTTAGACCATGTACAA+TGG | - | chr7_4:21695007-21695026 | None:intergenic | 40.0% | |
| TGCAACTTCCAACTTCCTAT+AGG | + | chr7_4:21695050-21695069 | Msa1145130:intron | 40.0% | |
| TCGGTCCATTAAGACAATAG+AGG | - | chr7_4:21695135-21695154 | None:intergenic | 40.0% | |
| AATAGGCTGGACAGTATGAT+AGG | - | chr7_4:21695318-21695337 | None:intergenic | 40.0% | |
| GATTCCAAAGCTGTAAATGG+CGG | - | chr7_4:21695380-21695399 | None:intergenic | 40.0% | |
| GAGGATTATCAAGTTCAAGG+TGG | - | chr7_4:21695954-21695973 | None:intergenic | 40.0% | |
| TAATCCTCGTTGGACTTACA+CGG | + | chr7_4:21695966-21695985 | Msa1145130:intron | 40.0% | |
| ATTCTGTCGGTCGTTAGAAA+GGG | - | chr7_4:21696374-21696393 | None:intergenic | 40.0% | |
| AATTCTGTCGGTCGTTAGAA+AGG | - | chr7_4:21696375-21696394 | None:intergenic | 40.0% | |
| CTCAGAAAAACCATTTGGCA+GGG | - | chr7_4:21696429-21696448 | None:intergenic | 40.0% | |
| ACTCAGAAAAACCATTTGGC+AGG | - | chr7_4:21696430-21696449 | None:intergenic | 40.0% | |
| TGTTGTTGTGAATGCCTTAG+AGG | - | chr7_4:21696637-21696656 | None:intergenic | 40.0% | |
| !! | AACACTGTGAGAGTTGATGA+TGG | - | chr7_4:21696781-21696800 | None:intergenic | 40.0% |
| AGCTGCTCTCTATGGTTATT+TGG | - | chr7_4:21696807-21696826 | None:intergenic | 40.0% | |
| TCACGCATCATCAATTGTCA+AGG | + | chr7_4:21696829-21696848 | Msa1145130:intron | 40.0% | |
| AAGTCCACAAATGCAATGAG+AGG | + | chr7_4:21697196-21697215 | Msa1145130:intron | 40.0% | |
| AGTCCACAAATGCAATGAGA+GGG | + | chr7_4:21697197-21697216 | Msa1145130:intron | 40.0% | |
| !! | GAGATTTTGTTTGTGGGATG+TGG | - | chr7_4:21697315-21697334 | None:intergenic | 40.0% |
| !! | TAGGGTTTGATTTGAAGGTG+AGG | - | chr7_4:21697416-21697435 | None:intergenic | 40.0% |
| GCTGGAATGTTGTATTGAGT+AGG | - | chr7_4:21697435-21697454 | None:intergenic | 40.0% | |
| ATAAGATAAGCTATGGTGGC+TGG | - | chr7_4:21697453-21697472 | None:intergenic | 40.0% | |
| CAAAACAAACGCAGTTCACT+AGG | - | chr7_4:21697562-21697581 | None:intergenic | 40.0% | |
| ! | CTAGTGAACTGCGTTTGTTT+TGG | + | chr7_4:21697560-21697579 | Msa1145130:intron | 40.0% |
| AGATGTATCAGGAATTGTGC+TGG | - | chr7_4:21697595-21697614 | None:intergenic | 40.0% | |
| CTCAGTCTTCAAGATGTATC+AGG | - | chr7_4:21697606-21697625 | None:intergenic | 40.0% | |
| CTGATACATCTTGAAGACTG+AGG | + | chr7_4:21697604-21697623 | Msa1145130:intron | 40.0% | |
| TCAATTTGCATGTTCCACTC+AGG | + | chr7_4:21697732-21697751 | Msa1145130:CDS | 40.0% | |
| TTCTGCAGTAAGGTTCTCAA+AGG | + | chr7_4:21697971-21697990 | Msa1145130:intron | 40.0% | |
| CTATGGAGATGAACACTCTA+AGG | + | chr7_4:21698002-21698021 | Msa1145130:CDS | 40.0% | |
| !! | CCCAGATAGTCTTGTAATGT+TGG | - | chr7_4:21698041-21698060 | None:intergenic | 40.0% |
| TACCAAGTGCTTAAACTCTG+TGG | + | chr7_4:21698138-21698157 | Msa1145130:CDS | 40.0% | |
| TAAACTCTGTGGCACTAACT+TGG | + | chr7_4:21698149-21698168 | Msa1145130:CDS | 40.0% | |
| CAGACATGATGCCTAATGCT+TGG | + | chr7_4:21692425-21692444 | Msa1145130:CDS | 45.0% | |
| GATTCTGCAGAGCTATCAAG+TGG | - | chr7_4:21692727-21692746 | None:intergenic | 45.0% | |
| !! | CTGTTCTGATTTCTGGCTCA+GGG | - | chr7_4:21692759-21692778 | None:intergenic | 45.0% |
| !! | TCTGTTCTGATTTCTGGCTC+AGG | - | chr7_4:21692760-21692779 | None:intergenic | 45.0% |
| ACACGGTCTGTTCTGATTTC+TGG | - | chr7_4:21692766-21692785 | None:intergenic | 45.0% | |
| !! | TCTGGTTTGGTCACAATTGG+TGG | - | chr7_4:21692901-21692920 | None:intergenic | 45.0% |
| GTTCACCAGGTGTGAAACTT+AGG | + | chr7_4:21693088-21693107 | Msa1145130:CDS | 45.0% | |
| ! | TGGTGGAAGACGTACTTTTC+CGG | - | chr7_4:21693158-21693177 | None:intergenic | 45.0% |
| TACGTCTTCCACCATCGTTT+CGG | + | chr7_4:21693164-21693183 | Msa1145130:CDS | 45.0% | |
| GTCGATCTTGAGCGAAATAC+AGG | - | chr7_4:21693443-21693462 | None:intergenic | 45.0% | |
| ACTAACTGAATCCAGGTTCC+AGG | - | chr7_4:21694234-21694253 | None:intergenic | 45.0% | |
| !! | GGATGAAAGAGGGTGTTGAA+AGG | + | chr7_4:21694425-21694444 | Msa1145130:intron | 45.0% |
| ! | GCTTGCTACGATTGACTGTT+TGG | + | chr7_4:21694486-21694505 | Msa1145130:intron | 45.0% |
| !! | GGTGTTGAAGGGTGTTGAAA+GGG | + | chr7_4:21694976-21694995 | Msa1145130:intron | 45.0% |
| GGCTATAGCCTATAGGAAGT+TGG | - | chr7_4:21695061-21695080 | None:intergenic | 45.0% | |
| TCACTTGGGCTATAGCCTAT+AGG | - | chr7_4:21695068-21695087 | None:intergenic | 45.0% | |
| ATTGCCGCCATTTACAGCTT+TGG | + | chr7_4:21695373-21695392 | Msa1145130:intron | 45.0% | |
| AGGGAAGTTGTTGTCTTGGA+TGG | - | chr7_4:21696410-21696429 | None:intergenic | 45.0% | |
| ACAACAACTTCCCTGCCAAA+TGG | + | chr7_4:21696416-21696435 | Msa1145130:intron | 45.0% | |
| GATTATGAGTCCCACCTCTA+AGG | + | chr7_4:21696620-21696639 | Msa1145130:intron | 45.0% | |
| GTTGTGAATGCCTTAGAGGT+GGG | - | chr7_4:21696633-21696652 | None:intergenic | 45.0% | |
| TGTTGTGAATGCCTTAGAGG+TGG | - | chr7_4:21696634-21696653 | None:intergenic | 45.0% | |
| !! | TTGAGGCTGACTTTTGAGAG+AGG | - | chr7_4:21696691-21696710 | None:intergenic | 45.0% |
| AAAATGTGCTTAGTGCGGGT+AGG | + | chr7_4:21697162-21697181 | Msa1145130:intron | 45.0% | |
| AAATGTGCTTAGTGCGGGTA+GGG | + | chr7_4:21697163-21697182 | Msa1145130:intron | 45.0% | |
| GTCCACAAATGCAATGAGAG+GGG | + | chr7_4:21697198-21697217 | Msa1145130:intron | 45.0% | |
| TCCACAAATGCAATGAGAGG+GGG | + | chr7_4:21697199-21697218 | Msa1145130:intron | 45.0% | |
| GTCCCCTCCAACTATTCATA+TGG | + | chr7_4:21697373-21697392 | Msa1145130:intron | 45.0% | |
| !! | TGTTGGCATTGGCTATGAGA+GGG | - | chr7_4:21697493-21697512 | None:intergenic | 45.0% |
| !! | TTGTTGGCATTGGCTATGAG+AGG | - | chr7_4:21697494-21697513 | None:intergenic | 45.0% |
| GTTCACTAGGACAGTGATCA+CGG | - | chr7_4:21697549-21697568 | None:intergenic | 45.0% | |
| TCTTGCCAACAACACCTATG+AGG | + | chr7_4:21697643-21697662 | Msa1145130:CDS | 45.0% | |
| ACATGTTGTGAGTGCCTCAT+AGG | - | chr7_4:21697660-21697679 | None:intergenic | 45.0% | |
| GATTCACAAACCTCGCTTCA+AGG | + | chr7_4:21697708-21697727 | Msa1145130:CDS | 45.0% | |
| TTGGTCCATCTCCAAGCAAA+TGG | + | chr7_4:21697760-21697779 | Msa1145130:intron | 45.0% | |
| CTTTACCGAGCATGCTTGAA+GGG | + | chr7_4:21697942-21697961 | Msa1145130:intron | 45.0% | |
| TGCAGTAAGGTTCTCAAAGG+TGG | + | chr7_4:21697974-21697993 | Msa1145130:intron | 45.0% | |
| TCTCAAAGGTGGTGTCTCTA+TGG | + | chr7_4:21697985-21698004 | Msa1145130:CDS | 45.0% | |
| TCTGGGTTCTGTGTACACAA+AGG | + | chr7_4:21698055-21698074 | Msa1145130:CDS | 45.0% | |
| TGCCACAGAGTTTAAGCACT+TGG | - | chr7_4:21698143-21698162 | None:intergenic | 45.0% | |
| !!! | ATTTATTTTTTAGTTTTTTT+TGG | - | chr7_4:21694757-21694776 | None:intergenic | 5.0% |
| !!! | CATATAAATATATTTTTTTA+AGG | + | chr7_4:21695165-21695184 | Msa1145130:intron | 5.0% |
| !! | AAAAAACATATATAAATAAA+TGG | + | chr7_4:21695274-21695293 | Msa1145130:intron | 5.0% |
| CGTTCGTCGGAAGAAGAACA+CGG | - | chr7_4:21692783-21692802 | None:intergenic | 50.0% | |
| TGGCAACCGGAGAAGTCTTT+CGG | + | chr7_4:21693188-21693207 | Msa1145130:CDS | 50.0% | |
| TCAATCTGACCGTCCACTAG+TGG | + | chr7_4:21693476-21693495 | Msa1145130:intron | 50.0% | |
| CAATCTGACCGTCCACTAGT+GGG | + | chr7_4:21693477-21693496 | Msa1145130:intron | 50.0% | |
| AATCTGACCGTCCACTAGTG+GGG | + | chr7_4:21693478-21693497 | Msa1145130:intron | 50.0% | |
| AATGTGACCCCACTAGTGGA+CGG | - | chr7_4:21693488-21693507 | None:intergenic | 50.0% | |
| !! | GGGTGTTGAAGGGTGTTGAA+AGG | + | chr7_4:21694975-21694994 | Msa1145130:intron | 50.0% |
| TACACCGTGTAAGTCCAACG+AGG | - | chr7_4:21695973-21695992 | None:intergenic | 50.0% | |
| TGGCAGGGAAGTTGTTGTCT+TGG | - | chr7_4:21696414-21696433 | None:intergenic | 50.0% | |
| !! | GGAGAGTATTAGAGCGGTTG+AGG | - | chr7_4:21696708-21696727 | None:intergenic | 50.0% |
| ! | TTTGAATTCCGGCTTGTCCG+CGG | + | chr7_4:21697106-21697125 | Msa1145130:intron | 50.0% |
| GATATTAACCGCGGACAAGC+CGG | - | chr7_4:21697117-21697136 | None:intergenic | 50.0% | |
| ACCCCCTCTCATTGCATTTG+TGG | - | chr7_4:21697203-21697222 | None:intergenic | 50.0% | |
| ATTGGCTATGAGAGGGACTG+TGG | - | chr7_4:21697486-21697505 | None:intergenic | 50.0% | |
| ! | TCACGGTGTCAGTCGGAATA+GGG | - | chr7_4:21697532-21697551 | None:intergenic | 50.0% |
| ! | ATCACGGTGTCAGTCGGAAT+AGG | - | chr7_4:21697533-21697552 | None:intergenic | 50.0% |
| ! | ACAGTGATCACGGTGTCAGT+CGG | - | chr7_4:21697539-21697558 | None:intergenic | 50.0% |
| ! | GAGTGCCTCATAGGTGTTGT+TGG | - | chr7_4:21697651-21697670 | None:intergenic | 50.0% |
| ! | TGAGGCACTCACAACATGTC+AGG | + | chr7_4:21697661-21697680 | Msa1145130:CDS | 50.0% |
| GCAAATTGAGCCTTGAAGCG+AGG | - | chr7_4:21697721-21697740 | None:intergenic | 50.0% | |
| ATGTTCCACTCAGGTGTGCT+TGG | + | chr7_4:21697741-21697760 | Msa1145130:intron | 50.0% | |
| GCTTTACCGAGCATGCTTGA+AGG | + | chr7_4:21697941-21697960 | Msa1145130:intron | 50.0% | |
| CAGTACCCTTCAAGCATGCT+CGG | - | chr7_4:21697950-21697969 | None:intergenic | 50.0% | |
| !! | AGGGTACTGCTTCTGCAGTA+AGG | + | chr7_4:21697961-21697980 | Msa1145130:intron | 50.0% |
| TCTTCCACCATCGTTTCGGC+TGG | + | chr7_4:21693168-21693187 | Msa1145130:CDS | 55.0% | |
| CCAAGAGGGTCATCCCTTGA+GGG | + | chr7_4:21694203-21694222 | Msa1145130:intron | 55.0% | |
| CCAAGAGGGTCATCCCTTGA+GGG | + | chr7_4:21694203-21694222 | Msa1145130:intron | 55.0% | |
| GTCAATCGTAGCAAGCCACG+TGG | - | chr7_4:21694482-21694501 | None:intergenic | 55.0% | |
| ! | GCGTGACTAGCTGCTCTCTA+TGG | - | chr7_4:21696815-21696834 | None:intergenic | 55.0% |
| ATGGACCAAGCACACCTGAG+TGG | - | chr7_4:21697749-21697768 | None:intergenic | 55.0% | |
| GTTGCCAGCCGAAACGATGG+TGG | - | chr7_4:21693175-21693194 | None:intergenic | 60.0% | |
| CCATCGTTTCGGCTGGCAAC+CGG | + | chr7_4:21693175-21693194 | Msa1145130:CDS | 60.0% | |
| GCCAAGAGGGTCATCCCTTG+AGG | + | chr7_4:21694202-21694221 | Msa1145130:intron | 60.0% | |
| CCCTCAAGGGATGACCCTCT+TGG | - | chr7_4:21694206-21694225 | None:intergenic | 60.0% | |
| GCCAAGAGGGTCATCCCTTG+AGG | + | chr7_4:21694202-21694221 | Msa1145130:intron | 60.0% | |
| CCCTCAAGGGATGACCCTCT+TGG | - | chr7_4:21694206-21694225 | None:intergenic | 60.0% | |
| CCGGTTGCCAGCCGAAACGA+TGG | - | chr7_4:21693178-21693197 | None:intergenic | 65.0% | |
| GTTCCAGGCGCGTCCCTCAA+GGG | - | chr7_4:21694219-21694238 | None:intergenic | 65.0% | |
| TCATCCCTTGAGGGACGCGC+TGG | + | chr7_4:21694212-21694231 | Msa1145130:intron | 65.0% | |
| GGTTCCAGCGCGTCCCTCAA+GGG | - | chr7_4:21694287-21694306 | None:intergenic | 65.0% | |
| AGGTTCCAGCGCGTCCCTCA+AGG | - | chr7_4:21694288-21694307 | None:intergenic | 65.0% | |
| TTGAGGGACGCGCTGGAACC+TGG | + | chr7_4:21694287-21694306 | Msa1145130:intron | 65.0% | |
| AGCAAGCCACGTGGCGTCTG+CGG | - | chr7_4:21694473-21694492 | None:intergenic | 65.0% | |
| CATCCCTTGAGGGACGCGCC+TGG | + | chr7_4:21694213-21694232 | Msa1145130:intron | 70.0% | |
| GGTTCCAGGCGCGTCCCTCA+AGG | - | chr7_4:21694220-21694239 | None:intergenic | 70.0% | |
| TGAGGGACGCGCCTGGAACC+TGG | + | chr7_4:21694220-21694239 | Msa1145130:intron | 70.0% | |
| GCAAGCCACGTGGCGTCTGC+GGG | - | chr7_4:21694472-21694491 | None:intergenic | 70.0% | |
| ! | GCTGGCCCGCAGACGCCACG+TGG | + | chr7_4:21694464-21694483 | Msa1145130:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 21692400 | 21698213 | 21692400 | ID=Msa1145130;Name=Msa1145130 |
| chr7_4 | mRNA | 21692400 | 21698213 | 21692400 | ID=Msa1145130-mRNA-1;Parent=Msa1145130;Name=Msa1145130-mRNA-1;_AED=0.24;_eAED=0.29;_QI=0|0|0|1|1|1|3|0|416 |
| chr7_4 | exon | 21692400 | 21693281 | 21692400 | ID=Msa1145130-mRNA-1:exon:5274;Parent=Msa1145130-mRNA-1 |
| chr7_4 | exon | 21697620 | 21697753 | 21697620 | ID=Msa1145130-mRNA-1:exon:5275;Parent=Msa1145130-mRNA-1 |
| chr7_4 | exon | 21697979 | 21698213 | 21697979 | ID=Msa1145130-mRNA-1:exon:5276;Parent=Msa1145130-mRNA-1 |
| chr7_4 | CDS | 21692400 | 21693281 | 21692400 | ID=Msa1145130-mRNA-1:cds;Parent=Msa1145130-mRNA-1 |
| chr7_4 | CDS | 21697620 | 21697753 | 21697620 | ID=Msa1145130-mRNA-1:cds;Parent=Msa1145130-mRNA-1 |
| chr7_4 | CDS | 21697979 | 21698213 | 21697979 | ID=Msa1145130-mRNA-1:cds;Parent=Msa1145130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
