AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1146130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1146130 MtrunA17_Chr7g0228531 67.233 412 124 4 1 411 31 432 0.0 546
Msa1146130 MtrunA17_Chr7g0228481 67.476 412 123 4 1 411 31 432 0.0 543
Msa1146130 MtrunA17_Chr7g0233161 86.364 242 32 1 1 241 109 350 1.24e-150 431
Msa1146130 MtrunA17_Chr7g0228401 46.921 471 168 7 1 394 31 496 6.73e-128 378
Msa1146130 MtrunA17_Chr7g0233151 88.953 172 19 0 240 411 1 172 3.51e-110 320
Msa1146130 MtrunA17_Chr4g0046181 70.248 242 71 1 1 241 31 272 1.59e-106 316
Msa1146130 MtrunA17_Chr7g0233061 45.378 357 158 10 32 385 36 358 2.02e-81 254
Msa1146130 MtrunA17_Chr1g0177901 55.450 211 73 5 200 395 4 208 1.32e-69 218
Msa1146130 MtrunA17_Chr4g0046171 73.759 141 37 0 271 411 1 141 7.05e-62 196
Msa1146130 MtrunA17_Chr3g0117511 71.654 127 36 0 184 310 177 303 1.20e-57 195
Msa1146130 MtrunA17_Chr4g0058991 68.852 122 38 0 189 310 208 329 3.58e-56 191
Msa1146130 MtrunA17_Chr5g0429661 59.690 129 45 1 189 310 121 249 1.67e-51 176
Msa1146130 MtrunA17_Chr7g0238631 45.652 184 69 4 185 344 108 284 1.62e-38 145
Msa1146130 MtrunA17_Chr1g0157731 55.046 109 48 1 185 292 86 194 4.90e-37 143
Msa1146130 MtrunA17_Chr3g0139671 55.963 109 47 1 185 292 80 188 7.56e-37 142
Msa1146130 MtrunA17_Chr4g0008551 53.922 102 47 0 188 289 36 137 5.34e-34 129
Msa1146130 MtrunA17_Chr5g0397841 59.375 96 39 0 189 284 109 204 6.44e-34 132
Msa1146130 MtrunA17_Chr4g0053431 51.456 103 50 0 187 289 2 104 1.22e-31 121
Msa1146130 MtrunA17_Chr3g0133601 48.544 103 53 0 187 289 34 136 1.28e-31 120
Msa1146130 MtrunA17_Chr5g0401731 50.000 112 56 0 178 289 3 114 2.69e-31 122
Msa1146130 MtrunA17_Chr5g0437321 53.000 100 47 0 187 286 16 115 1.23e-29 116
Msa1146130 MtrunA17_Chr6g0454921 48.544 103 53 0 184 286 9 111 3.94e-28 110
Msa1146130 MtrunA17_Chr4g0022901 42.742 124 67 3 190 309 15 138 3.05e-26 106
Msa1146130 MtrunA17_Chr2g0323351 45.045 111 60 1 190 299 14 124 6.24e-26 105
Msa1146130 MtrunA17_Chr4g0022911 39.286 140 77 4 190 325 15 150 6.41e-26 106
Msa1146130 MtrunA17_Chr6g0480581 43.810 105 59 0 190 294 4 108 1.14e-25 104
Msa1146130 MtrunA17_Chr4g0022931 45.631 103 54 2 190 290 15 117 2.11e-25 104
Msa1146130 MtrunA17_Chr5g0417621 45.133 113 57 1 190 297 134 246 3.07e-25 107
Msa1146130 MtrunA17_Chr5g0410961 45.545 101 54 1 190 289 14 114 4.97e-25 104
Msa1146130 MtrunA17_Chr2g0309911 42.574 101 57 1 190 289 13 113 6.15e-25 103
Msa1146130 MtrunA17_Chr3g0099131 46.154 104 55 1 187 289 40 143 8.06e-25 106
Msa1146130 MtrunA17_Chr4g0039971 48.544 103 51 2 190 290 15 117 1.13e-24 103
Msa1146130 MtrunA17_Chr4g0042501 45.000 100 55 0 190 289 105 204 1.42e-24 104
Msa1146130 MtrunA17_Chr1g0154031 44.828 116 56 2 190 304 78 186 2.12e-24 104
Msa1146130 MtrunA17_Chr8g0385321 43.966 116 59 3 180 293 8 119 2.74e-24 102
Msa1146130 MtrunA17_Chr4g0037141 48.182 110 53 2 190 298 14 120 2.75e-24 101
Msa1146130 MtrunA17_Chr6g0460671 46.535 101 54 0 189 289 98 198 2.90e-24 102
Msa1146130 MtrunA17_Chr6g0460661 43.000 100 57 0 190 289 16 115 4.16e-24 97.8
Msa1146130 MtrunA17_Chr3g0080861 37.255 153 78 3 142 292 7 143 5.67e-24 103
Msa1146130 MtrunA17_Chr8g0349261 48.113 106 48 3 190 290 15 118 6.89e-24 100
Msa1146130 MtrunA17_Chr1g0180391 35.519 183 100 6 190 358 21 199 8.52e-24 99.0
Msa1146130 MtrunA17_Chr1g0211161 41.584 101 58 1 190 289 15 115 9.79e-24 98.6
Msa1146130 MtrunA17_Chr2g0281071 45.545 101 54 1 190 289 15 115 1.00e-23 101
Msa1146130 MtrunA17_Chr3g0117091 41.584 101 58 1 190 289 14 114 1.07e-23 101
Msa1146130 MtrunA17_Chr8g0354661 49.057 106 50 3 190 292 39 143 1.24e-23 103
Msa1146130 MtrunA17_Chr7g0261281 43.966 116 61 3 190 302 14 128 1.35e-23 99.4
Msa1146130 MtrunA17_Chr4g0013361 36.364 165 70 5 190 331 12 164 1.36e-23 99.8
Msa1146130 MtrunA17_Chr4g0030881 42.982 114 57 1 190 295 9 122 1.65e-23 99.0
Msa1146130 MtrunA17_Chr1g0186061 44.954 109 54 2 190 297 22 125 1.70e-23 98.6
Msa1146130 MtrunA17_Chr5g0395281 44.660 103 55 2 190 290 14 116 1.75e-23 99.8
Msa1146130 MtrunA17_Chr4g0055981 46.392 97 51 1 190 285 57 153 1.94e-23 97.8
Msa1146130 MtrunA17_Chr1g0193371 44.660 103 55 2 190 290 14 116 1.99e-23 100
Msa1146130 MtrunA17_Chr4g0048511 44.554 101 55 1 190 289 15 115 2.71e-23 100
Msa1146130 MtrunA17_Chr3g0088461 44.355 124 61 3 175 290 3 126 2.72e-23 100
Msa1146130 MtrunA17_Chr2g0323411 45.545 101 54 1 190 289 14 114 2.97e-23 99.4
Msa1146130 MtrunA17_Chr7g0240821 40.496 121 66 4 193 308 6 125 3.18e-23 97.4
Msa1146130 MtrunA17_Chr3g0104491 53.571 84 32 2 240 317 17 99 3.33e-23 98.6
Msa1146130 MtrunA17_Chr8g0342541 39.604 101 60 1 190 289 14 114 3.40e-23 99.8
Msa1146130 MtrunA17_Chr2g0327821 46.364 110 57 2 190 298 8 116 4.46e-23 97.1
Msa1146130 MtrunA17_Chr3g0131121 46.226 106 55 2 190 293 14 119 5.04e-23 98.2
Msa1146130 MtrunA17_Chr4g0057031 45.631 103 54 2 190 290 14 116 5.37e-23 97.8
Msa1146130 MtrunA17_Chr1g0193801 43.396 106 58 2 190 293 14 119 6.68e-23 99.4
Msa1146130 MtrunA17_Chr7g0228231 44.554 101 55 1 184 283 10 110 7.37e-23 95.9
Msa1146130 MtrunA17_Chr3g0125801 47.000 100 53 0 190 289 16 115 7.58e-23 97.8
Msa1146130 MtrunA17_Chr8g0346561 48.454 97 49 1 190 285 14 110 7.85e-23 97.8
Msa1146130 MtrunA17_Chr2g0328771 45.631 103 54 2 190 290 22 124 8.21e-23 98.2
Msa1146130 MtrunA17_Chr1g0168661 47.368 95 49 1 190 283 23 117 8.31e-23 97.1
Msa1146130 MtrunA17_Chr6g0452271 32.335 167 97 3 190 340 14 180 8.57e-23 98.6
Msa1146130 MtrunA17_Chr3g0115821 29.121 182 109 4 190 362 14 184 9.72e-23 98.6
Msa1146130 MtrunA17_Chr8g0334881 46.602 103 53 2 190 290 12 114 1.02e-22 97.8
Msa1146130 MtrunA17_Chr7g0275911 45.872 109 55 2 190 297 14 119 1.03e-22 96.7
Msa1146130 MtrunA17_Chr8g0342521 40.594 101 59 1 190 289 14 114 1.12e-22 98.2
Msa1146130 MtrunA17_Chr7g0270891 43.396 106 58 2 190 293 14 119 1.15e-22 98.6
Msa1146130 MtrunA17_Chr4g0058631 42.157 102 56 2 190 289 14 114 1.22e-22 98.2
Msa1146130 MtrunA17_Chr2g0330041 39.604 101 60 1 190 289 14 114 1.34e-22 99.0
Msa1146130 MtrunA17_Chr4g0042671 44.660 103 55 2 190 290 14 116 1.64e-22 98.6
Msa1146130 MtrunA17_Chr7g0254261 39.161 143 76 2 156 289 48 188 2.33e-22 97.4
Msa1146130 MtrunA17_Chr5g0434571 45.631 103 54 2 190 290 50 152 2.35e-22 97.4
Msa1146130 MtrunA17_Chr4g0032401 45.631 103 54 2 190 290 19 121 2.58e-22 97.1
Msa1146130 MtrunA17_Chr4g0070641 45.361 97 52 1 190 285 14 110 2.71e-22 93.2
Msa1146130 MtrunA17_Chr7g0271241 45.833 96 51 1 190 284 14 109 3.23e-22 97.4
Msa1146130 MtrunA17_Chr4g0070611 45.361 97 52 1 190 285 14 110 3.56e-22 96.3
Msa1146130 MtrunA17_Chr5g0397231 45.361 97 52 1 190 285 14 110 4.06e-22 96.7
Msa1146130 MtrunA17_Chr5g0440781 44.660 103 55 2 190 290 14 116 4.53e-22 93.2
Msa1146130 MtrunA17_Chr5g0435101 43.564 101 56 1 190 289 13 113 4.77e-22 93.6
Msa1146130 MtrunA17_Chr8g0387421 44.444 108 56 2 182 285 3 110 5.36e-22 95.9
Msa1146130 MtrunA17_Chr5g0441141 44.660 103 55 2 190 290 14 116 5.80e-22 94.7
Msa1146130 MtrunA17_Chr5g0440761 44.660 103 55 2 190 290 14 116 6.37e-22 94.7
Msa1146130 MtrunA17_Chr1g0167661 34.302 172 101 4 190 359 14 175 6.64e-22 94.4
Msa1146130 MtrunA17_Chr7g0274581 43.299 97 52 2 190 284 14 109 7.15e-22 92.8
Msa1146130 MtrunA17_Chr3g0110351 44.660 103 55 2 190 290 14 116 7.94e-22 95.1
Msa1146130 MtrunA17_Chr3g0103281 41.346 104 60 1 187 289 11 114 1.30e-21 94.7
Msa1146130 MtrunA17_Chr7g0217741 44.660 103 55 2 190 290 14 116 1.38e-21 94.4
Msa1146130 MtrunA17_Chr2g0311221 46.602 103 53 2 185 285 10 112 1.54e-21 94.7
Msa1146130 MtrunA17_Chr4g0044421 42.574 101 57 1 190 289 14 114 1.58e-21 91.7
Msa1146130 MtrunA17_Chr6g0450101 43.564 101 56 1 184 283 10 110 1.96e-21 91.7
Msa1146130 MtrunA17_Chr5g0417821 45.631 103 54 2 190 290 9 111 2.16e-21 93.6
Msa1146130 MtrunA17_Chr5g0441131 43.137 102 56 2 190 289 11 112 2.88e-21 90.5
Msa1146130 MtrunA17_Chr8g0342481 38.235 102 61 2 190 289 14 115 2.92e-21 94.7
Msa1146130 MtrunA17_Chr8g0343831 41.346 104 59 2 184 285 3 106 4.72e-21 91.7
Msa1146130 MtrunA17_Chr1g0167691 43.689 103 56 2 190 290 14 116 5.05e-21 91.7
Msa1146130 MtrunA17_Chr4g0068061 42.574 101 57 1 190 289 14 114 7.06e-21 92.8
Msa1146130 MtrunA17_Chr1g0203411 44.330 97 53 1 190 285 14 110 7.58e-21 92.0
Msa1146130 MtrunA17_Chr1g0209661 38.710 124 73 3 184 305 22 144 7.81e-21 92.4
Msa1146130 MtrunA17_Chr7g0228891 43.689 103 56 2 190 290 14 116 9.44e-21 91.3
Msa1146130 MtrunA17_Chr1g0192411 43.564 101 56 1 190 289 14 114 1.25e-20 93.2
Msa1146130 MtrunA17_Chr5g0434841 35.032 157 95 3 190 344 22 173 2.24e-20 91.3
Msa1146130 MtrunA17_Chr6g0453471 43.689 103 56 2 190 290 14 116 2.57e-20 91.7
Msa1146130 MtrunA17_Chr1g0187761 42.308 104 58 2 190 291 14 117 3.85e-20 89.4
Msa1146130 MtrunA17_Chr5g0434831 33.758 157 97 3 190 344 9 160 4.01e-20 87.8
Msa1146130 MtrunA17_Chr1g0151941 41.176 102 58 2 190 289 14 115 4.33e-20 89.0
Msa1146130 MtrunA17_Chr2g0322521 38.000 150 73 4 190 337 31 162 4.54e-20 91.3
Msa1146130 MtrunA17_Chr7g0228991 34.286 140 85 2 190 328 31 164 6.44e-20 89.0
Msa1146130 MtrunA17_Chr7g0247131 50.633 79 36 2 215 290 4 82 8.04e-20 88.6
Msa1146130 MtrunA17_Chr8g0362231 40.187 107 57 1 193 299 25 124 8.56e-20 90.9
Msa1146130 MtrunA17_Chr4g0022881 40.206 97 57 1 190 285 14 110 8.56e-20 87.8
Msa1146130 MtrunA17_Chr3g0104501 69.811 53 16 0 189 241 132 184 1.07e-19 86.7
Msa1146130 MtrunA17_Chr5g0416341 40.206 97 58 0 193 289 29 125 1.54e-19 90.5
Msa1146130 MtrunA17_Chr5g0434931 38.679 106 64 1 190 294 37 142 1.55e-19 88.2
Msa1146130 MtrunA17_Chr4g0022891 41.237 97 56 1 190 285 14 110 1.90e-19 87.0
Msa1146130 MtrunA17_Chr7g0217221 40.171 117 66 3 190 304 14 128 2.07e-19 87.4
Msa1146130 MtrunA17_Chr7g0220341 35.172 145 78 4 190 328 27 161 2.76e-19 87.4
Msa1146130 MtrunA17_Chr3g0121241 39.091 110 63 2 190 298 44 150 4.04e-19 87.4
Msa1146130 MtrunA17_Chr5g0421201 59.420 69 25 1 242 310 12 77 5.12e-19 84.3
Msa1146130 MtrunA17_Chr4g0060721 37.815 119 65 4 190 304 15 128 6.11e-19 87.4
Msa1146130 MtrunA17_Chr3g0135311 42.202 109 60 3 190 295 14 122 7.61e-19 87.0
Msa1146130 MtrunA17_Chr1g0203441 36.842 114 71 1 181 293 6 119 8.08e-19 85.9
Msa1146130 MtrunA17_Chr5g0400821 40.909 110 61 3 190 295 14 123 1.46e-18 85.9
Msa1146130 MtrunA17_Chr1g0152011 37.607 117 69 3 190 302 14 130 1.69e-18 86.3
Msa1146130 MtrunA17_Chr5g0434911 37.736 106 65 1 190 294 23 128 2.17e-18 84.7
Msa1146130 MtrunA17_Chr1g0194291 37.838 111 68 1 174 283 7 117 3.20e-18 84.0
Msa1146130 MtrunA17_Chr6g0453211 41.237 97 56 1 190 285 14 110 3.33e-18 84.7
Msa1146130 MtrunA17_Chr6g0470971 37.963 108 66 1 190 296 16 123 3.79e-18 84.3
Msa1146130 MtrunA17_Chr3g0099141 36.364 110 69 1 160 268 12 121 5.23e-18 80.1
Msa1146130 MtrunA17_Chr8g0360111 40.000 95 56 1 190 283 27 121 5.28e-18 83.2
Msa1146130 MtrunA17_Chr1g0194951 41.237 97 56 1 190 285 14 110 6.55e-18 84.7
Msa1146130 MtrunA17_Chr1g0194301 41.053 95 55 1 190 283 35 129 6.96e-18 83.2
Msa1146130 MtrunA17_Chr7g0254411 41.346 104 59 2 190 291 14 117 9.04e-18 84.0
Msa1146130 MtrunA17_Chr4g0072751 42.857 98 54 2 190 285 14 111 9.72e-18 84.0
Msa1146130 MtrunA17_Chr2g0327351 40.816 98 56 2 190 285 14 111 1.40e-17 83.2
Msa1146130 MtrunA17_Chr3g0092401 39.604 101 60 1 190 289 15 115 2.02e-17 82.4
Msa1146130 MtrunA17_Chr4g0028311 39.623 106 61 3 190 292 14 119 3.00e-17 82.0
Msa1146130 MtrunA17_Chr4g0054391 40.206 97 56 2 190 284 14 110 5.94e-17 80.9
Msa1146130 MtrunA17_Chr6g0487491 37.273 110 59 3 190 289 14 123 9.22e-17 79.7
Msa1146130 MtrunA17_Chr2g0293911 38.182 110 62 2 175 283 16 120 1.19e-16 80.5
Msa1146130 MtrunA17_Chr7g0264641 37.143 105 64 2 187 289 11 115 3.30e-16 78.2
Msa1146130 MtrunA17_Chr7g0238651 33.898 118 73 2 190 304 7 122 3.96e-16 79.3
Msa1146130 MtrunA17_Chr4g0068921 39.252 107 64 1 185 290 21 127 9.54e-16 75.5
Msa1146130 MtrunA17_Chr7g0269831 45.361 97 52 1 190 285 14 110 1.06e-15 77.8
Msa1146130 MtrunA17_Chr2g0323321 35.870 92 58 1 190 280 13 104 1.17e-15 72.8
Msa1146130 MtrunA17_Chr5g0434901 44.776 67 37 0 222 288 8 74 9.16e-15 70.5
Msa1146130 MtrunA17_Chr4g0042611 41.333 75 43 1 190 263 14 88 1.51e-13 65.9
Msa1146130 MtrunA17_Chr8g0342471 39.744 78 45 2 190 265 14 91 3.36e-13 66.6
Msa1146130 MtrunA17_Chr7g0229101 42.424 66 38 0 223 288 8 73 5.03e-13 67.8
Msa1146130 MtrunA17_Chr6g0483051 41.489 94 54 1 190 283 120 212 5.06e-13 70.9
Msa1146130 MtrunA17_Chr6g0483051 34.343 99 64 1 185 283 64 161 1.03e-12 69.7
Msa1146130 MtrunA17_Chr3g0093811 36.986 73 44 1 219 289 12 84 7.57e-13 68.6
Msa1146130 MtrunA17_Chr8g0342461 38.462 78 46 2 190 265 14 91 9.31e-13 65.5
Msa1146130 MtrunA17_Chr5g0395221 40.000 75 44 1 190 263 14 88 1.14e-12 63.5
Msa1146130 MtrunA17_Chr8g0342531 35.443 79 48 2 190 266 14 91 1.36e-12 65.5
Msa1146130 MtrunA17_Chr5g0425591 39.506 81 47 2 190 268 11 91 1.61e-12 63.2
Msa1146130 MtrunA17_Chr8g0342511 36.486 74 46 1 190 262 14 87 1.63e-12 63.5
Msa1146130 MtrunA17_Chr7g0229131 40.299 67 40 0 223 289 8 74 4.16e-12 64.3
Msa1146130 MtrunA17_Chr7g0274481 35.484 93 58 2 191 282 8 99 1.02e-11 67.0
Msa1146130 MtrunA17_Chr2g0294811 36.842 76 45 2 190 263 14 88 1.78e-11 61.2
Msa1146130 MtrunA17_Chr5g0397691 36.170 94 56 2 190 282 7 97 3.26e-11 65.1
Msa1146130 MtrunA17_Chr6g0453751 34.000 100 53 4 190 279 22 118 7.89e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1146130 AT4G18770.1 69.672 122 37 0 189 310 216 337 1.88e-56 192
Msa1146130 AT3G27785.1 55.114 176 70 4 147 314 143 317 5.46e-54 185
Msa1146130 AT5G58850.1 47.090 189 93 2 112 300 34 215 4.90e-51 177
Msa1146130 AT5G40360.1 53.595 153 68 2 165 314 132 284 2.32e-48 168
Msa1146130 AT5G11050.1 62.500 120 43 1 180 297 93 212 1.47e-47 168
Msa1146130 AT3G09370.2 59.048 105 43 0 185 289 130 234 2.40e-38 145
Msa1146130 AT3G09370.1 59.048 105 43 0 185 289 125 229 2.54e-38 145
Msa1146130 AT3G09370.3 59.048 105 43 0 185 289 138 242 3.74e-38 144
Msa1146130 AT2G25230.1 46.575 146 76 1 169 314 7 150 1.08e-37 137
Msa1146130 AT5G11510.3 54.128 109 49 1 185 292 76 184 1.86e-37 145
Msa1146130 AT5G11510.1 54.128 109 49 1 185 292 76 184 1.86e-37 145
Msa1146130 AT5G11510.4 54.128 109 49 1 185 292 76 184 1.86e-37 145
Msa1146130 AT5G11510.2 54.128 109 49 1 185 292 76 184 2.43e-37 144
Msa1146130 AT5G11510.5 54.128 109 49 1 185 292 76 184 2.79e-37 144
Msa1146130 AT5G02320.1 57.143 105 45 0 185 289 122 226 1.34e-36 140
Msa1146130 AT5G02320.2 57.143 105 45 0 185 289 122 226 1.34e-36 140
Msa1146130 AT5G02320.3 57.143 105 45 0 185 289 62 166 1.75e-36 139
Msa1146130 AT5G40430.1 47.794 136 68 2 190 323 54 188 7.40e-35 130
Msa1146130 AT4G32730.5 52.294 109 51 1 185 292 82 190 1.19e-34 137
Msa1146130 AT4G32730.4 52.294 109 51 1 185 292 82 190 1.19e-34 137
Msa1146130 AT4G32730.3 52.294 109 51 1 185 292 82 190 1.19e-34 137
Msa1146130 AT4G32730.2 52.294 109 51 1 185 292 82 190 1.19e-34 137
Msa1146130 AT4G32730.1 52.294 109 51 1 185 292 82 190 1.70e-34 136
Msa1146130 AT4G00540.2 51.667 120 49 3 180 290 88 207 1.55e-30 121
Msa1146130 AT4G00540.2 36.893 103 56 2 190 283 46 148 6.86e-13 70.1
Msa1146130 AT3G55730.1 48.673 113 58 0 187 299 53 165 2.73e-30 120
Msa1146130 AT4G00540.1 51.667 120 49 3 180 290 86 205 4.39e-30 120
Msa1146130 AT4G00540.1 36.893 103 56 2 190 283 44 146 1.14e-12 69.7
Msa1146130 AT3G09230.1 50.485 103 51 0 187 289 52 154 1.40e-29 119
Msa1146130 AT4G37260.1 50.943 106 52 0 184 289 7 112 5.43e-29 115
Msa1146130 AT2G23290.1 50.000 106 53 0 184 289 7 112 5.45e-28 112
Msa1146130 AT5G67300.1 44.643 112 62 0 187 298 3 114 4.03e-27 110
Msa1146130 AT3G50060.1 44.660 103 57 0 187 289 3 105 5.53e-27 109
Msa1146130 AT1G57560.1 34.518 197 112 3 190 377 14 202 6.89e-27 109
Msa1146130 AT1G17950.1 37.415 147 87 2 190 333 5 149 1.96e-26 107
Msa1146130 AT5G17800.1 35.484 186 112 2 190 375 93 270 3.28e-26 108
Msa1146130 AT4G33450.1 42.742 124 67 1 178 301 7 126 3.55e-26 106
Msa1146130 AT3G11440.2 47.619 105 53 2 190 292 43 147 3.90e-26 110
Msa1146130 AT4G38620.1 39.869 153 88 2 190 341 14 163 5.85e-26 106
Msa1146130 AT3G28470.1 46.000 100 53 1 187 285 11 110 8.84e-26 106
Msa1146130 AT3G11440.3 47.619 105 53 2 190 292 43 147 9.80e-26 109
Msa1146130 AT3G11440.4 47.619 105 53 2 190 292 43 147 9.80e-26 109
Msa1146130 AT3G11440.1 47.619 105 53 2 190 292 43 147 9.80e-26 109
Msa1146130 AT1G69560.2 42.017 119 69 0 190 308 123 241 1.48e-25 106
Msa1146130 AT1G69560.1 42.017 119 69 0 190 308 107 225 1.57e-25 106
Msa1146130 AT2G26960.1 50.000 102 50 1 190 290 22 123 1.89e-25 107
Msa1146130 AT2G39880.1 42.593 108 62 0 187 294 47 154 2.80e-25 106
Msa1146130 AT1G26780.1 47.000 100 53 0 190 289 98 197 1.21e-24 102
Msa1146130 AT5G14750.1 38.806 134 79 2 190 322 18 149 1.46e-24 100
Msa1146130 AT1G26780.2 47.000 100 53 0 190 289 98 197 1.51e-24 104
Msa1146130 AT4G09460.1 33.981 206 106 6 190 394 14 190 1.54e-24 101
Msa1146130 AT5G06100.1 45.714 105 55 2 190 292 34 138 1.68e-24 105
Msa1146130 AT4G28110.1 46.535 101 53 1 190 289 14 114 1.87e-24 102
Msa1146130 AT4G26930.1 44.118 102 56 1 190 290 21 122 1.89e-24 104
Msa1146130 AT5G55020.1 45.098 102 55 1 190 290 28 129 1.98e-24 105
Msa1146130 AT3G29020.1 42.609 115 61 1 190 304 65 174 2.26e-24 100
Msa1146130 AT5G06100.5 45.714 105 55 2 190 292 34 138 3.06e-24 105
Msa1146130 AT5G06100.2 45.714 105 55 2 190 292 34 138 3.06e-24 105
Msa1146130 AT5G06100.3 45.714 105 55 2 190 292 34 138 3.06e-24 105
Msa1146130 AT5G06100.4 45.714 105 55 2 190 292 34 138 3.06e-24 105
Msa1146130 AT2G32460.2 46.535 101 53 1 190 289 8 108 3.38e-24 104
Msa1146130 AT2G32460.1 46.535 101 53 1 190 289 20 120 3.58e-24 104
Msa1146130 AT3G29020.2 42.609 115 61 1 190 304 67 176 3.64e-24 102
Msa1146130 AT1G22640.1 48.544 103 51 2 190 290 14 116 5.06e-24 100
Msa1146130 AT4G01680.1 40.714 140 77 3 190 326 14 150 6.32e-24 102
Msa1146130 AT4G01680.3 40.714 140 77 3 190 326 14 150 8.50e-24 99.8
Msa1146130 AT5G59780.3 45.872 109 57 2 190 297 10 117 8.60e-24 99.4
Msa1146130 AT2G26950.1 43.119 109 53 2 190 293 18 122 9.29e-24 102
Msa1146130 AT1G09540.1 43.636 110 58 2 190 298 14 120 1.02e-23 102
Msa1146130 AT4G21440.1 47.525 101 52 1 190 289 14 114 1.09e-23 101
Msa1146130 AT1G57560.2 33.333 189 86 5 190 377 14 163 1.29e-23 99.8
Msa1146130 AT3G46130.1 46.789 109 56 2 190 297 11 118 1.50e-23 99.4
Msa1146130 AT3G27920.1 41.593 113 63 2 174 285 2 112 1.50e-23 98.6
Msa1146130 AT3G12720.1 41.584 101 58 1 190 289 24 124 1.70e-23 100
Msa1146130 AT5G26660.1 35.669 157 95 4 190 342 14 168 2.23e-23 100
Msa1146130 AT3G61250.1 47.573 103 52 2 190 290 14 116 2.30e-23 99.8
Msa1146130 AT4G01680.2 38.158 152 76 3 190 326 14 162 2.33e-23 100
Msa1146130 AT4G05100.1 45.545 101 54 1 190 289 15 115 2.41e-23 100
Msa1146130 AT5G12870.1 47.573 103 52 2 190 290 20 122 2.59e-23 99.4
Msa1146130 AT1G74430.1 43.396 106 59 1 190 294 14 119 3.67e-23 98.6
Msa1146130 AT5G40330.1 44.330 97 53 1 190 285 14 110 4.85e-23 97.1
Msa1146130 AT3G13890.2 39.604 101 60 1 190 289 14 114 8.19e-23 99.4
Msa1146130 AT3G30210.1 36.810 163 87 3 190 342 29 185 8.37e-23 97.8
Msa1146130 AT5G16770.4 46.535 101 53 1 190 289 14 114 8.47e-23 98.6
Msa1146130 AT5G16770.3 46.535 101 53 1 190 289 14 114 8.47e-23 98.6
Msa1146130 AT3G13890.1 37.273 110 59 1 190 289 14 123 1.01e-22 99.0
Msa1146130 AT5G16770.1 46.535 101 53 1 190 289 14 114 1.01e-22 98.6
Msa1146130 AT5G16770.2 46.535 101 53 1 190 289 14 114 1.01e-22 98.6
Msa1146130 AT5G10280.1 44.660 103 55 2 190 290 14 116 1.21e-22 98.2
Msa1146130 AT3G24310.1 40.678 118 69 1 190 306 20 137 1.47e-22 96.7
Msa1146130 AT2G16720.1 47.222 108 51 3 190 293 14 119 1.62e-22 96.7
Msa1146130 AT4G22680.1 44.660 103 55 2 190 290 14 116 2.94e-22 95.9
Msa1146130 AT2G47190.1 41.964 112 64 1 173 283 5 116 3.16e-22 95.9
Msa1146130 AT4G13480.1 47.368 95 49 1 190 283 8 102 3.37e-22 95.5
Msa1146130 AT1G35515.1 43.636 110 58 2 190 298 14 120 3.55e-22 94.4
Msa1146130 AT5G07690.1 45.098 102 55 1 190 290 14 115 3.55e-22 97.1
Msa1146130 AT1G66230.1 45.192 104 53 3 190 290 14 116 4.08e-22 95.9
Msa1146130 AT4G12350.1 43.689 103 56 2 190 290 14 116 4.16e-22 95.9
Msa1146130 AT5G54230.1 45.631 103 54 2 190 290 14 116 4.27e-22 96.7
Msa1146130 AT1G18570.1 47.573 103 52 2 190 290 15 117 4.54e-22 97.1
Msa1146130 AT5G07700.1 45.631 103 54 2 190 290 14 116 5.11e-22 96.7
Msa1146130 AT5G07700.2 45.631 103 54 2 190 290 14 116 5.11e-22 96.7
Msa1146130 AT3G02940.2 45.545 101 54 1 190 289 14 114 8.22e-22 95.5
Msa1146130 AT2G31180.1 38.793 116 70 1 190 304 14 129 8.41e-22 94.4
Msa1146130 AT5G35550.1 43.564 101 56 1 190 289 16 116 9.51e-22 94.4
Msa1146130 AT5G61420.2 45.631 103 54 2 190 290 14 116 9.66e-22 96.3
Msa1146130 AT5G65230.1 43.689 103 56 2 190 290 14 116 1.09e-21 95.1
Msa1146130 AT3G08500.1 43.925 107 58 2 186 290 28 134 1.21e-21 95.5
Msa1146130 AT4G34990.1 46.602 103 53 2 190 290 14 116 1.24e-21 94.4
Msa1146130 AT3G02940.1 45.545 101 54 1 190 289 14 114 1.31e-21 95.1
Msa1146130 AT3G02940.3 45.545 101 54 1 190 289 14 114 1.31e-21 95.1
Msa1146130 AT3G23250.1 41.739 115 63 3 190 301 14 127 1.96e-21 94.0
Msa1146130 AT1G73410.1 45.000 100 55 0 190 289 6 105 1.97e-21 93.2
Msa1146130 AT1G73410.2 45.000 100 55 0 190 289 6 105 2.56e-21 91.7
Msa1146130 AT3G48920.1 42.500 120 65 3 172 289 3 120 2.77e-21 93.2
Msa1146130 AT3G60460.1 43.689 103 56 2 190 290 13 115 2.92e-21 94.0
Msa1146130 AT3G13540.1 40.594 101 59 1 190 289 25 125 3.09e-21 92.8
Msa1146130 AT5G56110.1 42.593 108 60 2 187 292 11 118 3.89e-21 94.0
Msa1146130 AT1G56160.1 43.119 109 59 3 185 290 10 118 4.30e-21 93.2
Msa1146130 AT5G52600.1 39.655 116 68 2 190 303 14 129 5.43e-21 90.9
Msa1146130 AT1G25340.1 46.392 97 51 1 188 283 18 114 5.62e-21 92.8
Msa1146130 AT3G53200.1 41.525 118 65 3 184 299 5 120 5.77e-21 91.7
Msa1146130 AT1G63910.1 44.330 97 53 1 190 285 14 110 6.72e-21 94.0
Msa1146130 AT1G74080.1 42.453 106 60 1 190 294 14 119 7.74e-21 93.2
Msa1146130 AT3G01530.1 43.564 101 56 1 190 289 27 127 7.85e-21 90.5
Msa1146130 AT1G34670.1 42.718 103 57 2 190 290 14 116 8.08e-21 93.6
Msa1146130 AT3G27810.1 45.263 95 51 1 190 283 22 116 1.07e-20 90.5
Msa1146130 AT1G25340.2 45.833 96 48 1 188 283 18 109 1.54e-20 91.3
Msa1146130 AT1G06180.1 43.689 103 56 2 190 290 14 116 1.59e-20 90.5
Msa1146130 AT5G60890.1 45.283 106 56 2 190 293 14 119 2.23e-20 91.3
Msa1146130 AT5G26660.2 34.932 146 79 4 200 342 5 137 2.50e-20 91.7
Msa1146130 AT4G17785.2 40.594 101 59 1 190 289 15 115 2.89e-20 91.7
Msa1146130 AT4G17785.1 40.594 101 59 1 190 289 15 115 3.05e-20 91.7
Msa1146130 AT3G01140.2 43.689 103 56 2 190 290 14 116 3.06e-20 91.7
Msa1146130 AT1G79180.1 44.231 104 54 3 190 290 16 118 3.37e-20 90.5
Msa1146130 AT1G25340.3 45.833 96 48 1 188 283 18 109 3.55e-20 90.9
Msa1146130 AT1G66370.1 43.299 97 54 1 190 285 10 106 3.80e-20 89.4
Msa1146130 AT3G01140.1 43.689 103 56 2 190 290 57 159 4.13e-20 91.7
Msa1146130 AT5G40350.1 44.211 95 52 1 190 283 19 113 4.59e-20 88.6
Msa1146130 AT3G62610.1 44.330 97 53 1 190 285 14 110 7.21e-20 90.5
Msa1146130 AT1G16490.1 41.121 107 59 3 190 293 16 121 7.79e-20 89.4
Msa1146130 AT5G15310.2 42.718 103 57 2 190 290 14 116 7.89e-20 90.1
Msa1146130 AT5G15310.1 42.718 103 57 2 190 290 14 116 8.12e-20 90.1
Msa1146130 AT1G68320.1 43.158 95 53 1 190 283 21 115 8.48e-20 89.4
Msa1146130 AT5G15310.4 42.718 103 57 2 190 290 14 116 1.01e-19 88.2
Msa1146130 AT5G57620.1 41.284 109 61 3 190 295 14 122 1.08e-19 89.7
Msa1146130 AT5G62320.1 43.636 110 53 3 190 290 15 124 1.57e-19 87.8
Msa1146130 AT5G39700.1 41.000 100 59 0 191 290 57 156 2.00e-19 85.9
Msa1146130 AT5G62470.1 37.069 116 72 1 190 304 14 129 2.43e-19 89.0
Msa1146130 AT4G37780.1 39.024 123 69 4 190 309 14 133 2.57e-19 88.2
Msa1146130 AT5G65790.1 42.478 113 61 3 187 295 11 123 2.99e-19 89.0
Msa1146130 AT2G47460.1 41.584 101 58 1 190 289 14 114 3.51e-19 89.0
Msa1146130 AT1G14350.2 36.364 121 74 2 193 310 28 148 4.02e-19 89.4
Msa1146130 AT1G14350.1 36.364 121 74 2 193 310 28 148 4.02e-19 89.4
Msa1146130 AT5G14340.1 41.176 102 57 2 190 289 26 126 4.12e-19 87.0
Msa1146130 AT5G16600.1 44.231 104 54 3 190 290 14 116 4.69e-19 87.8
Msa1146130 AT4G25560.1 41.237 97 56 1 190 285 12 108 5.60e-19 87.0
Msa1146130 AT1G18710.1 38.679 106 63 2 190 293 14 119 1.34e-18 85.5
Msa1146130 AT5G14750.3 38.000 100 60 1 223 322 18 115 2.45e-18 82.4
Msa1146130 AT5G49330.1 41.237 97 56 1 190 285 14 110 3.82e-18 85.5
Msa1146130 AT3G49690.1 40.909 110 61 3 190 295 14 123 3.93e-18 85.1
Msa1146130 AT3G47600.1 41.237 97 56 1 190 285 14 110 4.35e-18 85.1
Msa1146130 AT1G48000.1 42.105 95 54 1 190 283 34 128 5.89e-18 83.2
Msa1146130 AT5G23000.1 41.176 102 58 2 190 289 14 115 6.37e-18 84.7
Msa1146130 AT1G74650.1 41.748 103 58 2 190 290 14 116 6.50e-18 84.7
Msa1146130 AT1G08810.1 34.247 146 89 3 190 333 14 154 7.63e-18 83.6
Msa1146130 AT5G62470.2 36.752 117 72 2 190 304 14 130 9.21e-18 84.3
Msa1146130 AT3G28910.1 42.857 105 56 3 190 291 14 117 9.56e-18 84.0
Msa1146130 AT5G35550.2 50.746 67 33 0 223 289 53 119 1.71e-17 82.4
Msa1146130 AT3G12820.1 39.286 112 66 2 185 294 10 121 1.97e-17 81.6
Msa1146130 AT2G02820.2 38.462 91 56 0 193 283 33 123 2.27e-17 84.3
Msa1146130 AT2G02820.1 38.462 91 56 0 193 283 33 123 3.16e-17 83.6
Msa1146130 AT2G02820.3 38.462 91 56 0 193 283 33 123 5.82e-17 82.0
Msa1146130 AT1G79180.2 35.294 136 53 4 190 290 16 151 9.44e-17 81.3
Msa1146130 AT1G66380.1 42.708 96 54 1 190 284 10 105 1.30e-16 76.6
Msa1146130 AT5G52260.1 41.000 100 56 2 188 285 12 110 1.71e-16 79.3
Msa1146130 AT1G56650.1 41.237 97 56 1 190 285 10 106 4.33e-16 77.8
Msa1146130 AT3G53200.2 48.052 77 39 1 223 299 12 87 5.91e-16 76.6
Msa1146130 AT3G27810.2 52.459 61 29 0 223 283 7 67 7.61e-16 75.5
Msa1146130 AT3G18100.1 40.426 94 56 0 190 283 546 639 7.78e-16 80.1
Msa1146130 AT3G18100.1 39.000 100 59 2 185 283 490 588 2.95e-15 78.6
Msa1146130 AT5G59780.2 46.667 75 39 1 223 297 23 96 1.03e-15 76.3
Msa1146130 AT5G49620.1 37.097 124 73 2 161 283 3 122 1.07e-15 77.8
Msa1146130 AT1G66390.1 42.268 97 55 1 190 285 10 106 1.19e-15 76.6
Msa1146130 AT3G18100.3 40.426 94 56 0 190 283 498 591 1.21e-15 79.7
Msa1146130 AT3G18100.3 39.000 100 59 2 185 283 442 540 4.56e-15 77.8
Msa1146130 AT3G18100.4 40.426 94 56 0 190 283 385 478 1.37e-15 79.3
Msa1146130 AT3G18100.4 39.000 100 59 2 185 283 329 427 6.05e-15 77.4
Msa1146130 AT3G12820.2 47.222 72 38 0 223 294 2 73 1.56e-15 75.1
Msa1146130 AT3G18100.2 40.426 94 56 0 190 283 333 426 1.82e-15 79.0
Msa1146130 AT3G18100.2 39.000 100 59 2 185 283 277 375 7.38e-15 77.0
Msa1146130 AT3G46130.4 46.667 75 39 1 223 297 23 96 2.22e-15 75.5
Msa1146130 AT3G46130.3 46.667 75 39 1 223 297 13 86 2.65e-15 75.1
Msa1146130 AT2G37630.1 35.537 121 75 1 192 309 6 126 3.39e-15 77.0
Msa1146130 AT3G06490.1 41.053 95 55 1 190 283 21 115 4.13e-15 76.3
Msa1146130 AT5G40350.2 50.820 61 30 0 223 283 8 68 4.66e-15 73.2
Msa1146130 AT2G36890.1 39.450 109 63 3 187 292 11 119 5.15e-15 75.5
Msa1146130 AT2G36890.2 39.450 109 63 3 187 292 52 160 7.79e-15 75.5
Msa1146130 AT1G22640.3 56.897 58 24 1 234 290 2 59 1.10e-14 72.8
Msa1146130 AT3G47600.2 47.619 63 33 0 223 285 42 104 6.99e-14 72.8
Msa1146130 AT5G14750.4 34.831 89 56 1 234 322 2 88 2.40e-13 67.4
Msa1146130 AT5G14750.2 34.831 89 56 1 234 322 2 88 2.40e-13 67.4
Msa1146130 AT5G49620.2 33.333 138 73 3 161 283 3 136 1.85e-12 68.2
Msa1146130 AT1G71030.2 39.062 64 39 0 226 289 5 68 2.06e-12 65.9
Msa1146130 AT1G71030.1 39.062 64 39 0 226 289 19 82 2.07e-12 66.2
Msa1146130 AT3G23250.2 43.478 69 38 1 234 301 2 70 9.99e-12 64.7
Msa1146130 AT1G09770.1 35.484 93 58 2 191 282 8 99 1.44e-11 67.0
Msa1146130 AT1G14350.3 33.019 106 55 3 208 310 13 105 2.82e-11 65.1
Msa1146130 AT1G14350.4 33.019 106 55 3 208 310 13 105 2.82e-11 65.1
Msa1146130 AT1G66380.3 47.619 63 33 0 223 285 11 73 4.57e-11 60.1

Find 106 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCCTGAGCTTTCAAAATT+TGG 0.042476 7_4:+23243333 None:intergenic
TAACACTAGCAAAGGAATTT+TGG 0.152151 7_4:-23246520 Msa1146130:CDS
GAATCCTCTTCAGCCGCTTT+TGG 0.192256 7_4:+23246304 None:intergenic
GTATGTCTTCCATCTTATTA+TGG 0.265624 7_4:+23246553 None:intergenic
TCCAATTGGTGGATCACTTT+GGG 0.286919 7_4:-23246055 Msa1146130:CDS
TAAGTTGAGTGCACTGATTT+TGG 0.290593 7_4:+23246745 None:intergenic
AATTATGAGTTTGGATCATA+TGG 0.312481 7_4:-23243201 Msa1146130:CDS
AGATCAATTTCTTGCTTAAG+AGG 0.316151 7_4:+23243156 None:intergenic
GGTTCTTCCTCTTGGCATTT+AGG 0.324518 7_4:+23243475 None:intergenic
CATTGTCCCTTGATTTGATT+AGG 0.334812 7_4:+23246252 None:intergenic
GGCATTTAGGCGGCGCTTAG+TGG 0.335034 7_4:+23243488 None:intergenic
CTATCATGCAATGATGGAAT+TGG 0.335430 7_4:-23246369 Msa1146130:CDS
TCTTCCATCTTATTATGGTT+TGG 0.336573 7_4:+23246558 None:intergenic
TGGAACATACCTACAAATTT+CGG 0.353979 7_4:+23243275 None:intergenic
ACCACAATGAATTATGAGTT+TGG 0.360754 7_4:-23243210 Msa1146130:CDS
TTGTAGGGTTCTTGTCCAAT+TGG 0.386156 7_4:-23246069 Msa1146130:intron
CCATCTTCGACCAGACATTA+AGG 0.395516 7_4:-23245958 Msa1146130:intron
TACCTACAAATTTCGGTCTC+TGG 0.409859 7_4:+23243282 None:intergenic
TACCGATTGGCTGGGATCAT+AGG 0.411423 7_4:+23246648 None:intergenic
CTTACCCCGGTTCTTCCTCT+TGG 0.419409 7_4:+23243467 None:intergenic
GTCCAATTGGTGGATCACTT+TGG 0.421631 7_4:-23246056 Msa1146130:CDS
TTGGCTGGGATCATAGGAAA+TGG 0.422288 7_4:+23246654 None:intergenic
AAATTCCTTTGCTAGTGTTA+AGG 0.422850 7_4:+23246523 None:intergenic
ATCACTTTGGGCTAAGAAAA+TGG 0.428054 7_4:-23246043 Msa1146130:CDS
TAAATGCCAAGAGGAAGAAC+CGG 0.428642 7_4:-23243473 Msa1146130:CDS
GTAGCCTTGTACCGATTGGC+TGG 0.429943 7_4:+23246639 None:intergenic
AAGTTTATGAAAGGAAGAAT+TGG 0.434545 7_4:-23246008 Msa1146130:CDS
TCATCACCATTGAACATCAT+TGG 0.435028 7_4:+23243255 None:intergenic
CTCCAGAGACCGAAATTTGT+AGG 0.439054 7_4:-23243284 Msa1146130:CDS
TAGGGTTCTTGTCCAATTGG+TGG 0.446482 7_4:-23246066 Msa1146130:CDS
TCAATTAATCCTGAGCTTCA+AGG 0.447008 7_4:-23246396 Msa1146130:CDS
GTGGTTCTTGATACAGTTCT+CGG 0.451164 7_4:+23243518 None:intergenic
GATCATAGGAAATGGGTTGA+TGG 0.453265 7_4:+23246662 None:intergenic
GCCCAAAGTGATCCACCAAT+TGG 0.461579 7_4:+23246054 None:intergenic
GAAATTTCAAGAAGATTGCC+AGG 0.467461 7_4:-23243546 Msa1146130:CDS
TCATAGGAAATGGGTTGATG+GGG 0.470069 7_4:+23246664 None:intergenic
GATGGAATGGCAAGTGGATC+TGG 0.471586 7_4:-23243234 Msa1146130:CDS
TAAGCAAGAAATTGATCTCA+TGG 0.473623 7_4:-23243151 Msa1146130:CDS
CAAGGATCCTAATCAAATCA+AGG 0.479925 7_4:-23246259 Msa1146130:CDS
GATAGATGTCCTTGAAGCTC+AGG 0.483878 7_4:+23246387 None:intergenic
TCTTGCTTAAGAGGAACCTC+AGG 0.484485 7_4:+23243165 None:intergenic
CAATGCTAAGGAAGTTGAAA+AGG 0.493311 7_4:-23243400 Msa1146130:CDS
ATAATGGTTCCTTCTCAACT+AGG 0.506235 7_4:-23246810 Msa1146130:CDS
TGGTGAAACTTCACAACCTC+GGG 0.506607 7_4:-23246469 Msa1146130:CDS
ATCATAGGAAATGGGTTGAT+GGG 0.507837 7_4:+23246663 None:intergenic
AAGAATGAGACCTTAATGTC+TGG 0.513472 7_4:+23245948 None:intergenic
CGTATTGCTAAGTTTATGAA+AGG 0.517758 7_4:-23246017 Msa1146130:CDS
ATACAGTTCTCGGTGCGCCC+TGG 0.520321 7_4:+23243528 None:intergenic
GGACATCTATCATGCAATGA+TGG 0.521532 7_4:-23246375 Msa1146130:CDS
ACAAGGCTACTCACACCAAT+GGG 0.525641 7_4:-23246626 Msa1146130:CDS
ATGATGTTCAATGGTGATGA+TGG 0.528337 7_4:-23243252 Msa1146130:CDS
CCTTAATGTCTGGTCGAAGA+TGG 0.530232 7_4:+23245958 None:intergenic
GTGCCCAAAAGCGGCTGAAG+AGG 0.530335 7_4:-23246308 Msa1146130:CDS
TTCCTATGATCCCAGCCAAT+CGG 0.532240 7_4:-23246650 Msa1146130:CDS
GTGATGGTTAGCCTCATTCA+AGG 0.534181 7_4:+23246713 None:intergenic
TGGCTGGGATCATAGGAAAT+GGG 0.540090 7_4:+23246655 None:intergenic
TTCCCTTTGAACTCTTACCC+CGG 0.540518 7_4:+23243454 None:intergenic
ATTGAAGCTCACAAAACAGT+TGG 0.541332 7_4:-23243582 Msa1146130:CDS
AAATCCCGAGAAAATGATCA+AGG 0.547568 7_4:-23246342 Msa1146130:CDS
AGATTTGAACCTAGTTGAGA+AGG 0.550181 7_4:+23246801 None:intergenic
TGCACCAAACCATAATAAGA+TGG 0.552990 7_4:-23246562 Msa1146130:CDS
AAATGCCAAGAGGAAGAACC+GGG 0.554441 7_4:-23243472 Msa1146130:CDS
TGAGTTTGGATCATATGGAA+TGG 0.555173 7_4:-23243196 Msa1146130:CDS
GATCCCAGCCAATCGGTACA+AGG 0.559254 7_4:-23246643 Msa1146130:CDS
AAATTCTCTCTGATACCCAT+TGG 0.560239 7_4:+23246611 None:intergenic
CATAGGAAATGGGTTGATGG+GGG 0.560555 7_4:+23246665 None:intergenic
AACCGGGGTAAGAGTTCAAA+GGG 0.562064 7_4:-23243456 Msa1146130:CDS
CTAATCAAATCAAGGGACAA+TGG 0.563071 7_4:-23246251 Msa1146130:CDS
GGCGCTTAGTGGCATTCCAG+TGG 0.563856 7_4:+23243499 None:intergenic
TATGTTCCAATGATGTTCAA+TGG 0.564980 7_4:-23243261 Msa1146130:CDS
GACGTATTCTACGAGCATGA+TGG 0.566078 7_4:-23243370 Msa1146130:CDS
TACAAGGCTACTCACACCAA+TGG 0.568722 7_4:-23246627 Msa1146130:CDS
GAAAACAGTGCAGAGAGAGA+TGG 0.572643 7_4:-23245986 Msa1146130:CDS
AATGAAAGTCACCAATGCTA+AGG 0.573363 7_4:-23243412 Msa1146130:CDS
TAAGAAACATCCCTTGAATG+AGG 0.578289 7_4:-23246724 Msa1146130:CDS
AGCTAGTGATGGTGATAGAG+AGG 0.585984 7_4:+23246440 None:intergenic
GAACCGGGGTAAGAGTTCAA+AGG 0.590922 7_4:-23243457 Msa1146130:CDS
ACAAAACAGTTGGAAACAAG+TGG 0.591819 7_4:-23243572 Msa1146130:CDS
TAGCCTTGTACCGATTGGCT+GGG 0.595235 7_4:+23246640 None:intergenic
TACAAATATGTGGTGTGTGA+TGG 0.595663 7_4:+23246768 None:intergenic
TCGTGCTCAGTGCCCAAAAG+CGG 0.606665 7_4:-23246317 Msa1146130:CDS
GAAGGATGCATGGACTGAAG+AGG 0.608291 7_4:-23243619 Msa1146130:CDS
AGAACTGTATCAAGAACCAC+TGG 0.608840 7_4:-23243515 Msa1146130:CDS
TATGATTGCAGAAGGATGCA+TGG 0.609027 7_4:-23243629 Msa1146130:intron
GTTCAATGGTGATGATGGAA+TGG 0.611388 7_4:-23243247 Msa1146130:CDS
GGGACAATGGACTTCAAATG+AGG 0.612328 7_4:-23246238 Msa1146130:CDS
AAGGATCCTAATCAAATCAA+GGG 0.616665 7_4:-23246258 Msa1146130:CDS
ATGGTGAAACTTCACAACCT+CGG 0.620631 7_4:-23246470 Msa1146130:CDS
GGTCGCCTTAACACTAGCAA+AGG 0.621057 7_4:-23246528 Msa1146130:CDS
GCTAGTGATGGTGATAGAGA+GGG 0.625596 7_4:+23246441 None:intergenic
TGATGGTTAGCCTCATTCAA+GGG 0.632215 7_4:+23246714 None:intergenic
AATAAGATGGAAGACATACA+TGG 0.632344 7_4:-23246549 Msa1146130:CDS
GTGAGTAGCCTTGTACCGAT+TGG 0.636096 7_4:+23246635 None:intergenic
GGTGATGATGGAATGGCAAG+TGG 0.637638 7_4:-23243240 Msa1146130:CDS
GGATGCATGGACTGAAGAGG+AGG 0.642594 7_4:-23243616 Msa1146130:CDS
AATGGACTTCAAATGAGGAT+CGG 0.644601 7_4:-23246233 Msa1146130:intron
AAATTTCAAGAAGATTGCCA+GGG 0.649002 7_4:-23243545 Msa1146130:CDS
GAATAATGAAATTCAACACA+AGG 0.657330 7_4:-23246277 Msa1146130:CDS
TCCAAACTCATAATTCATTG+TGG 0.657863 7_4:+23243209 None:intergenic
ATGCTCGTAGAATACGTCAT+CGG 0.676177 7_4:+23243375 None:intergenic
TCTTCCTCTTGGCATTTAGG+CGG 0.677072 7_4:+23243478 None:intergenic
TATGTGGTGTGTGATGGTGA+AGG 0.681997 7_4:+23246774 None:intergenic
TGTGCATCATAAGCTAGTGA+TGG 0.682566 7_4:+23246429 None:intergenic
GATAGAGAGGGACTTACCCG+AGG 0.707182 7_4:+23246453 None:intergenic
AGCGCCGCCTAAATGCCAAG+AGG 0.709993 7_4:-23243482 Msa1146130:CDS
AATGCCAAGAGGAAGAACCG+GGG 0.791379 7_4:-23243471 Msa1146130:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTGTTTTATATTTTTGT+AGG - chr7_4:23243850-23243869 Msa1146130:intron 10.0%
!!! AATTGTTTTATATTTTTGTA+GGG - chr7_4:23243851-23243870 Msa1146130:intron 10.0%
!!! TTCACAAAAAATTTAAATTT+TGG - chr7_4:23244387-23244406 Msa1146130:intron 10.0%
!!! TCACAAAAAATTTAAATTTT+GGG - chr7_4:23244388-23244407 Msa1146130:intron 10.0%
!!! CATAATTTTTTTTATATGTT+AGG + chr7_4:23244502-23244521 None:intergenic 10.0%
!! TATAAAAAAAATTATGTTTC+GGG - chr7_4:23244506-23244525 Msa1146130:intron 10.0%
!!! TGTTTTTTATTAATATTTGA+GGG - chr7_4:23244755-23244774 Msa1146130:intron 10.0%
!!! TCTTTATCTATTTTTAATTT+TGG - chr7_4:23245110-23245129 Msa1146130:intron 10.0%
!! GTAAAAATCAAATATGTTAA+GGG + chr7_4:23244103-23244122 None:intergenic 15.0%
!! TGTAAAAATCAAATATGTTA+AGG + chr7_4:23244104-23244123 None:intergenic 15.0%
!! TAGTTTAATAAACATTTCAT+TGG - chr7_4:23244255-23244274 Msa1146130:intron 15.0%
!!! TCTATTTTTATAAATAAACC+AGG - chr7_4:23244321-23244340 Msa1146130:intron 15.0%
!!! CTATTTTTATAAATAAACCA+GGG - chr7_4:23244322-23244341 Msa1146130:intron 15.0%
!! CAAAAAGTAATATTTATCAT+CGG + chr7_4:23244681-23244700 None:intergenic 15.0%
!! AACACTTATAAATAAAACTT+AGG + chr7_4:23244739-23244758 None:intergenic 15.0%
!!! GTGTTTTTTATTAATATTTG+AGG - chr7_4:23244754-23244773 Msa1146130:intron 15.0%
!!! GTTTTTTATTAATATTTGAG+GGG - chr7_4:23244756-23244775 Msa1146130:intron 15.0%
!!! ATTATTTACCTTTTTTTCTT+AGG - chr7_4:23244779-23244798 Msa1146130:intron 15.0%
!!! TTATTTACCTTTTTTTCTTA+GGG - chr7_4:23244780-23244799 Msa1146130:intron 15.0%
!!! TTGTTTAAAATCTAATATTG+AGG - chr7_4:23245064-23245083 Msa1146130:intron 15.0%
!!! CAATTTTATATAATCAATGT+GGG + chr7_4:23245218-23245237 None:intergenic 15.0%
!!! ACAATTTTATATAATCAATG+TGG + chr7_4:23245219-23245238 None:intergenic 15.0%
!!! CTATATATTTTCATTTCAAA+TGG + chr7_4:23245935-23245954 None:intergenic 15.0%
!!! ATGTGTTGATGATTTTATAA+AGG - chr7_4:23244207-23244226 Msa1146130:intron 20.0%
!! AAAAATAGACAACTAAATAG+TGG + chr7_4:23244310-23244329 None:intergenic 20.0%
!! AATCCTTAAAAATTTGAACA+GGG + chr7_4:23244369-23244388 None:intergenic 20.0%
!!! TTCTTTTTAGTGTCTTATTT+AGG + chr7_4:23244423-23244442 None:intergenic 20.0%
!! TTAGTACAATGTTTATTTCA+GGG + chr7_4:23244588-23244607 None:intergenic 20.0%
!! TTTAGTACAATGTTTATTTC+AGG + chr7_4:23244589-23244608 None:intergenic 20.0%
!!! ACAAATTACTTATTGATGAT+AGG + chr7_4:23244625-23244644 None:intergenic 20.0%
!!! ACTTTTTGTAGAGAATAAAA+CGG - chr7_4:23244693-23244712 Msa1146130:intron 20.0%
!! ATAAAAAAGCAAAAGATCTA+AGG + chr7_4:23244847-23244866 None:intergenic 20.0%
!! TTTAATGAATCAAAAAGCAA+GGG + chr7_4:23245027-23245046 None:intergenic 20.0%
!!! TTTTAATGAATCAAAAAGCA+AGG + chr7_4:23245028-23245047 None:intergenic 20.0%
!! TCAATGTATTATTTAAGTCA+TGG - chr7_4:23245239-23245258 Msa1146130:intron 20.0%
!! ATACTAGAGATAAAGTATAT+AGG + chr7_4:23245592-23245611 None:intergenic 20.0%
!! TTTACATTGTTTGACAATTA+AGG + chr7_4:23245741-23245760 None:intergenic 20.0%
!! GCTCATAAATACTTATTAAA+TGG + chr7_4:23245784-23245803 None:intergenic 20.0%
!! TCAAATATTTCATCATACAT+TGG - chr7_4:23245838-23245857 Msa1146130:intron 20.0%
!! AATATGCCTATATGTTAAAT+TGG - chr7_4:23246049-23246068 Msa1146130:CDS 20.0%
! ACAAAAAATCTCTTTCAACA+TGG - chr7_4:23243446-23243465 Msa1146130:CDS 25.0%
! GAATAATGAAATTCAACACA+AGG - chr7_4:23243658-23243677 Msa1146130:intron 25.0%
! AAGTTTATGAAAGGAAGAAT+TGG - chr7_4:23243927-23243946 Msa1146130:intron 25.0%
! GAATCCTTAAAAATTTGAAC+AGG + chr7_4:23244370-23244389 None:intergenic 25.0%
!!! AGTGTCTTATTTAGGTTTTT+GGG + chr7_4:23244415-23244434 None:intergenic 25.0%
!!! TAGTGTCTTATTTAGGTTTT+TGG + chr7_4:23244416-23244435 None:intergenic 25.0%
! ATTAACAAAAATCACCTTAG+TGG - chr7_4:23244447-23244466 Msa1146130:intron 25.0%
! TTAACAAAAATCACCTTAGT+GGG - chr7_4:23244448-23244467 Msa1146130:intron 25.0%
! AAAACATCCCTAAGAAAAAA+AGG + chr7_4:23244790-23244809 None:intergenic 25.0%
! CTAACAAAAACATATGTGAA+AGG + chr7_4:23245192-23245211 None:intergenic 25.0%
! AATTTGCAAGTATTTGATAG+AGG - chr7_4:23245325-23245344 Msa1146130:intron 25.0%
! GAAAGAGTTAAGTTATAAGA+AGG + chr7_4:23245370-23245389 None:intergenic 25.0%
! CTTACAAATGAGACATAAAA+GGG + chr7_4:23245413-23245432 None:intergenic 25.0%
! TCTTACAAATGAGACATAAA+AGG + chr7_4:23245414-23245433 None:intergenic 25.0%
! TCCTATCAAAATAATTCATG+TGG - chr7_4:23245669-23245688 Msa1146130:intron 25.0%
!!! TCCACATGAATTATTTTGAT+AGG + chr7_4:23245673-23245692 None:intergenic 25.0%
!!! TTTAACAAGAGGTTTTTCAA+GGG - chr7_4:23245985-23246004 Msa1146130:CDS 25.0%
!!! AAGAGTGTTATTCATACAAT+TGG - chr7_4:23246017-23246036 Msa1146130:CDS 25.0%
! CAAACACCAATTTAACATAT+AGG + chr7_4:23246058-23246077 None:intergenic 25.0%
! GACAATGAATCATAAACAAA+AGG + chr7_4:23246087-23246106 None:intergenic 25.0%
!!! ATATGTGTGGATTAGATATA+TGG + chr7_4:23246279-23246298 None:intergenic 25.0%
! ATCATACAAAACAATATGTG+TGG + chr7_4:23246292-23246311 None:intergenic 25.0%
! AATTATGAGTTTGGATCATA+TGG - chr7_4:23246734-23246753 Msa1146130:CDS 25.0%
!! CTGATTTTGGTACAAATATG+TGG + chr7_4:23243180-23243199 None:intergenic 30.0%
TCTTCCATCTTATTATGGTT+TGG + chr7_4:23243380-23243399 None:intergenic 30.0%
GTATGTCTTCCATCTTATTA+TGG + chr7_4:23243385-23243404 None:intergenic 30.0%
AATAAGATGGAAGACATACA+TGG - chr7_4:23243386-23243405 Msa1146130:CDS 30.0%
AAATTCCTTTGCTAGTGTTA+AGG + chr7_4:23243415-23243434 None:intergenic 30.0%
! TAACACTAGCAAAGGAATTT+TGG - chr7_4:23243415-23243434 Msa1146130:CDS 30.0%
AAGGATCCTAATCAAATCAA+GGG - chr7_4:23243677-23243696 Msa1146130:intron 30.0%
CGTATTGCTAAGTTTATGAA+AGG - chr7_4:23243918-23243937 Msa1146130:intron 30.0%
!!! GTGTCTTATTTAGGTTTTTG+GGG + chr7_4:23244414-23244433 None:intergenic 30.0%
TATATATCTTTAGCCCACTA+AGG + chr7_4:23244464-23244483 None:intergenic 30.0%
!!! TAGGGATGTTTTTTTAGAGA+TGG - chr7_4:23244798-23244817 Msa1146130:intron 30.0%
! AAAAAAGAGTGTACAAGAAG+GGG + chr7_4:23244910-23244929 None:intergenic 30.0%
! GAAAAAAGAGTGTACAAGAA+GGG + chr7_4:23244911-23244930 None:intergenic 30.0%
! AGAAAAAAGAGTGTACAAGA+AGG + chr7_4:23244912-23244931 None:intergenic 30.0%
!!! ATTTTTCGAGCATGTGATAT+AGG - chr7_4:23244942-23244961 Msa1146130:intron 30.0%
ATGGAGTTTCTTTCACTTAA+TGG - chr7_4:23245258-23245277 Msa1146130:intron 30.0%
ATAAAAGGGAGTTATAAGGT+TGG + chr7_4:23245399-23245418 None:intergenic 30.0%
AGACATAAAAGGGAGTTATA+AGG + chr7_4:23245403-23245422 None:intergenic 30.0%
TAGTATGTAACTCTTAGTCA+TGG - chr7_4:23245606-23245625 Msa1146130:intron 30.0%
! GTATCGATCATAAACTTACA+TGG + chr7_4:23245806-23245825 None:intergenic 30.0%
GTAAACTTTACTAAATCTGC+AGG - chr7_4:23245887-23245906 Msa1146130:intron 30.0%
AGCAATGTAACTTTAACAAG+AGG - chr7_4:23245974-23245993 Msa1146130:CDS 30.0%
! CTTTAACAAGAGGTTTTTCA+AGG - chr7_4:23245984-23246003 Msa1146130:CDS 30.0%
ATAGCATGTATTTGTTCCAA+CGG + chr7_4:23246177-23246196 None:intergenic 30.0%
ATCATCAATTTAGCAATGAC+TGG + chr7_4:23246224-23246243 None:intergenic 30.0%
!! TTGTTTTGTATGATTGCAGA+AGG - chr7_4:23246298-23246317 Msa1146130:CDS 30.0%
AAATTTCAAGAAGATTGCCA+GGG - chr7_4:23246390-23246409 Msa1146130:CDS 30.0%
!! AACCAAATTTTGAAAGCTCA+GGG - chr7_4:23246600-23246619 Msa1146130:CDS 30.0%
!!! TGATTTTAGAACTGAAGGTT+TGG - chr7_4:23246625-23246644 Msa1146130:CDS 30.0%
TGGAACATACCTACAAATTT+CGG + chr7_4:23246663-23246682 None:intergenic 30.0%
TATGTTCCAATGATGTTCAA+TGG - chr7_4:23246674-23246693 Msa1146130:CDS 30.0%
ACCACAATGAATTATGAGTT+TGG - chr7_4:23246725-23246744 Msa1146130:CDS 30.0%
TCCAAACTCATAATTCATTG+TGG + chr7_4:23246729-23246748 None:intergenic 30.0%
AGATCAATTTCTTGCTTAAG+AGG + chr7_4:23246782-23246801 None:intergenic 30.0%
TAAGCAAGAAATTGATCTCA+TGG - chr7_4:23246784-23246803 Msa1146130:CDS 30.0%
AGATTTGAACCTAGTTGAGA+AGG + chr7_4:23243137-23243156 None:intergenic 35.0%
TACAAATATGTGGTGTGTGA+TGG + chr7_4:23243170-23243189 None:intergenic 35.0%
!!! TAAGTTGAGTGCACTGATTT+TGG + chr7_4:23243193-23243212 None:intergenic 35.0%
TAAGAAACATCCCTTGAATG+AGG - chr7_4:23243211-23243230 Msa1146130:CDS 35.0%
TTGCAGAAAAACTAGAGTGA+TGG + chr7_4:23243241-23243260 None:intergenic 35.0%
!!! TCACTCTAGTTTTTCTGCAA+TGG - chr7_4:23243241-23243260 Msa1146130:CDS 35.0%
!! ATCATAGGAAATGGGTTGAT+GGG + chr7_4:23243275-23243294 None:intergenic 35.0%
AAATTCTCTCTGATACCCAT+TGG + chr7_4:23243327-23243346 None:intergenic 35.0%
TGCACCAAACCATAATAAGA+TGG - chr7_4:23243373-23243392 Msa1146130:CDS 35.0%
TCAATTAATCCTGAGCTTCA+AGG - chr7_4:23243539-23243558 Msa1146130:CDS 35.0%
! CTATCATGCAATGATGGAAT+TGG - chr7_4:23243566-23243585 Msa1146130:CDS 35.0%
AAATCCCGAGAAAATGATCA+AGG - chr7_4:23243593-23243612 Msa1146130:CDS 35.0%
! GAATCCTTGATCATTTTCTC+GGG + chr7_4:23243600-23243619 None:intergenic 35.0%
! CGAATCCTTGATCATTTTCT+CGG + chr7_4:23243601-23243620 None:intergenic 35.0%
CAAGGATCCTAATCAAATCA+AGG - chr7_4:23243676-23243695 Msa1146130:intron 35.0%
! CATTGTCCCTTGATTTGATT+AGG + chr7_4:23243686-23243705 None:intergenic 35.0%
CTAATCAAATCAAGGGACAA+TGG - chr7_4:23243684-23243703 Msa1146130:intron 35.0%
! AATGGACTTCAAATGAGGAT+CGG - chr7_4:23243702-23243721 Msa1146130:intron 35.0%
ATCACTTTGGGCTAAGAAAA+TGG - chr7_4:23243892-23243911 Msa1146130:intron 35.0%
AAGAATGAGACCTTAATGTC+TGG + chr7_4:23243990-23244009 None:intergenic 35.0%
!! GGCCAACAAATTTGTTAAGA+CGG + chr7_4:23244348-23244367 None:intergenic 35.0%
! TGGCCCTGTTCAAATTTTTA+AGG - chr7_4:23244363-23244382 Msa1146130:intron 35.0%
TACAATGTTTATTTCAGGGC+CGG + chr7_4:23244584-23244603 None:intergenic 35.0%
!!! TCTGTTTTTGTCCTTATTCG+AGG - chr7_4:23244871-23244890 Msa1146130:intron 35.0%
!!! CTGTTTTTGTCCTTATTCGA+GGG - chr7_4:23244872-23244891 Msa1146130:intron 35.0%
CAAACAAAAACCCTCGAATA+AGG + chr7_4:23244885-23244904 None:intergenic 35.0%
! CTTATTCGAGGGTTTTTGTT+TGG - chr7_4:23244883-23244902 Msa1146130:intron 35.0%
ATGAATCAAAAAGCAAGGGA+AGG + chr7_4:23245023-23245042 None:intergenic 35.0%
ATTGAAGCTCACAAAACAGT+TGG - chr7_4:23246353-23246372 Msa1146130:CDS 35.0%
ACAAAACAGTTGGAAACAAG+TGG - chr7_4:23246363-23246382 Msa1146130:CDS 35.0%
GAAATTTCAAGAAGATTGCC+AGG - chr7_4:23246389-23246408 Msa1146130:CDS 35.0%
AATGAAAGTCACCAATGCTA+AGG - chr7_4:23246523-23246542 Msa1146130:CDS 35.0%
! CTTTTCAACTTCCTTAGCAT+TGG + chr7_4:23246537-23246556 None:intergenic 35.0%
CAATGCTAAGGAAGTTGAAA+AGG - chr7_4:23246535-23246554 Msa1146130:CDS 35.0%
!! CAACCAAATTTTGAAAGCTC+AGG - chr7_4:23246599-23246618 Msa1146130:CDS 35.0%
TCATCACCATTGAACATCAT+TGG + chr7_4:23246683-23246702 None:intergenic 35.0%
! ATGATGTTCAATGGTGATGA+TGG - chr7_4:23246683-23246702 Msa1146130:CDS 35.0%
TGAGTTTGGATCATATGGAA+TGG - chr7_4:23246739-23246758 Msa1146130:CDS 35.0%
!! TGATGGTTAGCCTCATTCAA+GGG + chr7_4:23243224-23243243 None:intergenic 40.0%
!! TCATAGGAAATGGGTTGATG+GGG + chr7_4:23243274-23243293 None:intergenic 40.0%
!! GATCATAGGAAATGGGTTGA+TGG + chr7_4:23243276-23243295 None:intergenic 40.0%
ATGGTGAAACTTCACAACCT+CGG - chr7_4:23243465-23243484 Msa1146130:CDS 40.0%
TGTGCATCATAAGCTAGTGA+TGG + chr7_4:23243509-23243528 None:intergenic 40.0%
GGACATCTATCATGCAATGA+TGG - chr7_4:23243560-23243579 Msa1146130:CDS 40.0%
TTGTAGGGTTCTTGTCCAAT+TGG - chr7_4:23243866-23243885 Msa1146130:intron 40.0%
! TCCAATTGGTGGATCACTTT+GGG - chr7_4:23243880-23243899 Msa1146130:intron 40.0%
GGCCGTCTTAACAAATTTGT+TGG - chr7_4:23244343-23244362 Msa1146130:intron 40.0%
TTCGAGCATGTGATATAGGA+TGG - chr7_4:23244946-23244965 Msa1146130:intron 40.0%
TCGAGCATGTGATATAGGAT+GGG - chr7_4:23244947-23244966 Msa1146130:intron 40.0%
TGAAATTGACAACCGTCATG+TGG - chr7_4:23245539-23245558 Msa1146130:intron 40.0%
TGTAAAAGCAAGCCACATGA+CGG + chr7_4:23245554-23245573 None:intergenic 40.0%
TATGATTGCAGAAGGATGCA+TGG - chr7_4:23246306-23246325 Msa1146130:CDS 40.0%
GTGGTTCTTGATACAGTTCT+CGG + chr7_4:23246420-23246439 None:intergenic 40.0%
AGAACTGTATCAAGAACCAC+TGG - chr7_4:23246420-23246439 Msa1146130:CDS 40.0%
TAAATGCCAAGAGGAAGAAC+CGG - chr7_4:23246462-23246481 Msa1146130:CDS 40.0%
ATGCTCGTAGAATACGTCAT+CGG + chr7_4:23246563-23246582 None:intergenic 40.0%
CTCCCTGAGCTTTCAAAATT+TGG + chr7_4:23246605-23246624 None:intergenic 40.0%
!!! GGGAGTGATTTTAGAACTGA+AGG - chr7_4:23246620-23246639 Msa1146130:CDS 40.0%
TACCTACAAATTTCGGTCTC+TGG + chr7_4:23246656-23246675 None:intergenic 40.0%
!! GTTCAATGGTGATGATGGAA+TGG - chr7_4:23246688-23246707 Msa1146130:CDS 40.0%
!!! TGGAATGGAGTTTTTTCCTG+AGG - chr7_4:23246754-23246773 Msa1146130:CDS 40.0%
! TATGTGGTGTGTGATGGTGA+AGG + chr7_4:23243164-23243183 None:intergenic 45.0%
!! GTGATGGTTAGCCTCATTCA+AGG + chr7_4:23243225-23243244 None:intergenic 45.0%
!! CATAGGAAATGGGTTGATGG+GGG + chr7_4:23243273-23243292 None:intergenic 45.0%
TGGCTGGGATCATAGGAAAT+GGG + chr7_4:23243283-23243302 None:intergenic 45.0%
TTGGCTGGGATCATAGGAAA+TGG + chr7_4:23243284-23243303 None:intergenic 45.0%
TTCCTATGATCCCAGCCAAT+CGG - chr7_4:23243285-23243304 Msa1146130:CDS 45.0%
TACAAGGCTACTCACACCAA+TGG - chr7_4:23243308-23243327 Msa1146130:CDS 45.0%
ACAAGGCTACTCACACCAAT+GGG - chr7_4:23243309-23243328 Msa1146130:CDS 45.0%
TGGTGAAACTTCACAACCTC+GGG - chr7_4:23243466-23243485 Msa1146130:CDS 45.0%
! GCTAGTGATGGTGATAGAGA+GGG + chr7_4:23243497-23243516 None:intergenic 45.0%
! AGCTAGTGATGGTGATAGAG+AGG + chr7_4:23243498-23243517 None:intergenic 45.0%
GATAGATGTCCTTGAAGCTC+AGG + chr7_4:23243551-23243570 None:intergenic 45.0%
!!! AATCCTCTTCAGCCGCTTTT+GGG + chr7_4:23243633-23243652 None:intergenic 45.0%
! GGGACAATGGACTTCAAATG+AGG - chr7_4:23243697-23243716 Msa1146130:intron 45.0%
TAGGGTTCTTGTCCAATTGG+TGG - chr7_4:23243869-23243888 Msa1146130:intron 45.0%
! GTCCAATTGGTGGATCACTT+TGG - chr7_4:23243879-23243898 Msa1146130:intron 45.0%
GAAAACAGTGCAGAGAGAGA+TGG - chr7_4:23243949-23243968 Msa1146130:intron 45.0%
CCTTAATGTCTGGTCGAAGA+TGG + chr7_4:23243980-23243999 None:intergenic 45.0%
CCATCTTCGACCAGACATTA+AGG - chr7_4:23243977-23243996 Msa1146130:intron 45.0%
!! CAAATTTGTTAAGACGGCCC+TGG + chr7_4:23244342-23244361 None:intergenic 45.0%
CGAGCATGTGATATAGGATG+GGG - chr7_4:23244948-23244967 Msa1146130:intron 45.0%
GAGCATGTGATATAGGATGG+GGG - chr7_4:23244949-23244968 Msa1146130:intron 45.0%
! AAAGCAAGGGAAGGCATGAA+GGG + chr7_4:23245014-23245033 None:intergenic 45.0%
! AAAAGCAAGGGAAGGCATGA+AGG + chr7_4:23245015-23245034 None:intergenic 45.0%
! AGGGAGTTATAAGGTTGGCT+TGG + chr7_4:23245394-23245413 None:intergenic 45.0%
CCAAGATATTGTTCTCCGCA+CGG - chr7_4:23246146-23246165 Msa1146130:intron 45.0%
GCATGTATTTGTTCCAACGG+TGG + chr7_4:23246174-23246193 None:intergenic 45.0%
TCTTCCTCTTGGCATTTAGG+CGG + chr7_4:23246460-23246479 None:intergenic 45.0%
GGTTCTTCCTCTTGGCATTT+AGG + chr7_4:23246463-23246482 None:intergenic 45.0%
AAATGCCAAGAGGAAGAACC+GGG - chr7_4:23246463-23246482 Msa1146130:CDS 45.0%
AACCGGGGTAAGAGTTCAAA+GGG - chr7_4:23246479-23246498 Msa1146130:CDS 45.0%
TTCCCTTTGAACTCTTACCC+CGG + chr7_4:23246484-23246503 None:intergenic 45.0%
GACGTATTCTACGAGCATGA+TGG - chr7_4:23246565-23246584 Msa1146130:CDS 45.0%
CTCCAGAGACCGAAATTTGT+AGG - chr7_4:23246651-23246670 Msa1146130:CDS 45.0%
TCTTGCTTAAGAGGAACCTC+AGG + chr7_4:23246773-23246792 None:intergenic 45.0%
!! AAAAAATAATAATATAATCA+AGG + chr7_4:23243797-23243816 None:intergenic 5.0%
!! AATAAAACAAAAAAAAATTA+TGG - chr7_4:23244145-23244164 Msa1146130:intron 5.0%
!! ATATAAAAAAAATTATGTTT+CGG - chr7_4:23244505-23244524 Msa1146130:intron 5.0%
! TACCGATTGGCTGGGATCAT+AGG + chr7_4:23243290-23243309 None:intergenic 50.0%
!! TAGCCTTGTACCGATTGGCT+GGG + chr7_4:23243298-23243317 None:intergenic 50.0%
!! GTGAGTAGCCTTGTACCGAT+TGG + chr7_4:23243303-23243322 None:intergenic 50.0%
GGTCGCCTTAACACTAGCAA+AGG - chr7_4:23243407-23243426 Msa1146130:CDS 50.0%
!! GAATCCTCTTCAGCCGCTTT+TGG + chr7_4:23243634-23243653 None:intergenic 50.0%
GCCCAAAGTGATCCACCAAT+TGG + chr7_4:23243884-23243903 None:intergenic 50.0%
TTCGGGCCCCAAAAAAATCG+AGG - chr7_4:23244523-23244542 Msa1146130:intron 50.0%
!!! ACCGGGCCTCGATTTTTTTG+GGG + chr7_4:23244532-23244551 None:intergenic 50.0%
!!! CACCGGGCCTCGATTTTTTT+GGG + chr7_4:23244533-23244552 None:intergenic 50.0%
! TATGGAGTGCCAACCTGGTT+GGG - chr7_4:23244976-23244995 Msa1146130:intron 50.0%
CCGTGCGGAGAACAATATCT+TGG + chr7_4:23246149-23246168 None:intergenic 50.0%
! GAAGGATGCATGGACTGAAG+AGG - chr7_4:23246316-23246335 Msa1146130:CDS 50.0%
AATGCCAAGAGGAAGAACCG+GGG - chr7_4:23246464-23246483 Msa1146130:CDS 50.0%
GAACCGGGGTAAGAGTTCAA+AGG - chr7_4:23246478-23246497 Msa1146130:CDS 50.0%
!! GGTGATGATGGAATGGCAAG+TGG - chr7_4:23246695-23246714 Msa1146130:CDS 50.0%
GATGGAATGGCAAGTGGATC+TGG - chr7_4:23246701-23246720 Msa1146130:CDS 50.0%
!! GGAAATGGGTTGATGGGGGA+AGG + chr7_4:23243269-23243288 None:intergenic 55.0%
GATCCCAGCCAATCGGTACA+AGG - chr7_4:23243292-23243311 Msa1146130:CDS 55.0%
!! GTAGCCTTGTACCGATTGGC+TGG + chr7_4:23243299-23243318 None:intergenic 55.0%
GATAGAGAGGGACTTACCCG+AGG + chr7_4:23243485-23243504 None:intergenic 55.0%
TCGTGCTCAGTGCCCAAAAG+CGG - chr7_4:23243618-23243637 Msa1146130:CDS 55.0%
GCCCCAAAAAAATCGAGGCC+CGG - chr7_4:23244528-23244547 Msa1146130:intron 55.0%
!!! CCACCGGGCCTCGATTTTTT+TGG + chr7_4:23244534-23244553 None:intergenic 55.0%
CCAAAAAAATCGAGGCCCGG+TGG - chr7_4:23244531-23244550 Msa1146130:intron 55.0%
ATATAGGATGGGGGCCGCTA+TGG - chr7_4:23244958-23244977 Msa1146130:intron 55.0%
! ACCAGGTTGGCACTCCATAG+CGG + chr7_4:23244975-23244994 None:intergenic 55.0%
! CTATGGAGTGCCAACCTGGT+TGG - chr7_4:23244975-23244994 Msa1146130:intron 55.0%
ACTAGGCATCCCAACCAGGT+TGG + chr7_4:23244988-23245007 None:intergenic 55.0%
! GAAGGCATGAAGGGACGACT+AGG + chr7_4:23245005-23245024 None:intergenic 55.0%
! GGATGCATGGACTGAAGAGG+AGG - chr7_4:23246319-23246338 Msa1146130:CDS 55.0%
CTTACCCCGGTTCTTCCTCT+TGG + chr7_4:23246471-23246490 None:intergenic 55.0%
GTGCCCAAAAGCGGCTGAAG+AGG - chr7_4:23243627-23243646 Msa1146130:intron 60.0%
GACGACTAGGCATCCCAACC+AGG + chr7_4:23244992-23245011 None:intergenic 60.0%
! ATACAGTTCTCGGTGCGCCC+TGG + chr7_4:23246410-23246429 None:intergenic 60.0%
GGCGCTTAGTGGCATTCCAG+TGG + chr7_4:23246439-23246458 None:intergenic 60.0%
GGCATTTAGGCGGCGCTTAG+TGG + chr7_4:23246450-23246469 None:intergenic 60.0%
AGCGCCGCCTAAATGCCAAG+AGG - chr7_4:23246453-23246472 Msa1146130:CDS 60.0%
TCGAGGCTGGGCTATGCCAC+CGG + chr7_4:23244550-23244569 None:intergenic 65.0%
TGGCATAGCCCAGCCTCGAC+AGG - chr7_4:23244551-23244570 Msa1146130:intron 65.0%
AGCCCAGCCTCGACAGGCTA+TGG - chr7_4:23244557-23244576 Msa1146130:intron 65.0%
GCCCAGCCTCGACAGGCTAT+GGG - chr7_4:23244558-23244577 Msa1146130:intron 65.0%
GCCCATAGCCTGTCGAGGCT+GGG + chr7_4:23244562-23244581 None:intergenic 65.0%
AGCCTCGACAGGCTATGGGC+CGG - chr7_4:23244562-23244581 Msa1146130:intron 65.0%
! GCCGCTATGGAGTGCCAACC+TGG - chr7_4:23244971-23244990 Msa1146130:intron 65.0%
GTTCCAACGGTGGCACCGTG+CGG + chr7_4:23246164-23246183 None:intergenic 65.0%
CGAGGCTGGGCTATGCCACC+GGG + chr7_4:23244549-23244568 None:intergenic 70.0%
GGCCCATAGCCTGTCGAGGC+TGG + chr7_4:23244563-23244582 None:intergenic 70.0%
!! TCTCCGCACGGTGCCACCGT+TGG - chr7_4:23246158-23246177 Msa1146130:intron 70.0%
GGCCGGCCCATAGCCTGTCG+AGG + chr7_4:23244567-23244586 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 23243128 23246829 23243128 ID=Msa1146130;Name=Msa1146130
chr7_4 mRNA 23243128 23246829 23243128 ID=Msa1146130-mRNA-1;Parent=Msa1146130;Name=Msa1146130-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|411
chr7_4 exon 23246234 23246829 23246234 ID=Msa1146130-mRNA-1:exon:5854;Parent=Msa1146130-mRNA-1
chr7_4 exon 23245959 23246085 23245959 ID=Msa1146130-mRNA-1:exon:5853;Parent=Msa1146130-mRNA-1
chr7_4 exon 23243128 23243640 23243128 ID=Msa1146130-mRNA-1:exon:5852;Parent=Msa1146130-mRNA-1
chr7_4 CDS 23246234 23246829 23246234 ID=Msa1146130-mRNA-1:cds;Parent=Msa1146130-mRNA-1
chr7_4 CDS 23245959 23246085 23245959 ID=Msa1146130-mRNA-1:cds;Parent=Msa1146130-mRNA-1
chr7_4 CDS 23243128 23243640 23243128 ID=Msa1146130-mRNA-1:cds;Parent=Msa1146130-mRNA-1
Gene Sequence

>Msa1146130

ATGGTTCCTTCTCAACTAGGTTCAAATCTTTCACCTTCACCATCACACACCACATATTTGTACCAAAATCAGTGCACTCAACTTAAGAAACATCCCTTGAATGAGGCTAACCATCACTCTAGTTTTTCTGCAATGGTTCCTTCCCCCATCAACCCATTTCCTATGATCCCAGCCAATCGGTACAAGGCTACTCACACCAATGGGTATCAGAGAGAATTTATCAGTGCTCGAAATTCAATGATCTTTGCACCAAACCATAATAAGATGGAAGACATACATGGTCGCCTTAACACTAGCAAAGGAATTTTGGATTTGTCTACAAAAAATCTCTTTCAACATGGTGAAACTTCACAACCTCGGGTAAGTCCCTCTCTATCACCATCACTAGCTTATGATGCACATAAATATGTGTCAATTAATCCTGAGCTTCAAGGACATCTATCATGCAATGATGGAATTGGAAACAAATCCCGAGAAAATGATCAAGGATTCGTGCTCAGTGCCCAAAAGCGGCTGAAGAGGATTCAAAAGAATAATGAAATTCAACACAAGGATCCTAATCAAATCAAGGGACAATGGACTTCAAATGAGGATCGGGTTCTTGTCCAATTGGTGGATCACTTTGGGCTAAGAAAATGGTCGCGTATTGCTAAGTTTATGAAAGGAAGAATTGGAAAACAGTGCAGAGAGAGATGGAACAACCATCTTCGACCAGACATTAAGAAGGATGCATGGACTGAAGAGGAGGACAAAATACTAATTGAAGCTCACAAAACAGTTGGAAACAAGTGGACTGAAATTTCAAGAAGATTGCCAGGGCGCACCGAGAACTGTATCAAGAACCACTGGAATGCCACTAAGCGCCGCCTAAATGCCAAGAGGAAGAACCGGGGTAAGAGTTCAAAGGGAATTCTACTTCTGAAATACATAATGAAAGTCACCAATGCTAAGGAAGTTGAAAAGGAGCCGATGACGTATTCTACGAGCATGATGGATATTAGAAATCAACCAAATTTTGAAAGCTCAGGGAGTGATTTTAGAACTGAAGGTTTGGCTACTCCAGAGACCGAAATTTGTAGGTATGTTCCAATGATGTTCAATGGTGATGATGGAATGGCAAGTGGATCTGGTACCACAATGAATTATGAGTTTGGATCATATGGAATGGAGTTTTTTCCTGAGGTTCCTCTTAAGCAAGAAATTGATCTCATGGAGATGATCTATAAAAACCCGTAA
Protein sequence

>Msa1146130

MVPSQLGSNLSPSPSHTTYLYQNQCTQLKKHPLNEANHHSSFSAMVPSPINPFPMIPANRYKATHTNGYQREFISARNSMIFAPNHNKMEDIHGRLNTSKGILDLSTKNLFQHGETSQPRVSPSLSPSLAYDAHKYVSINPELQGHLSCNDGIGNKSRENDQGFVLSAQKRLKRIQKNNEIQHKDPNQIKGQWTSNEDRVLVQLVDHFGLRKWSRIAKFMKGRIGKQCRERWNNHLRPDIKKDAWTEEEDKILIEAHKTVGNKWTEISRRLPGRTENCIKNHWNATKRRLNAKRKNRGKSSKGILLLKYIMKVTNAKEVEKEPMTYSTSMMDIRNQPNFESSGSDFRTEGLATPETEICRYVPMMFNGDDGMASGSGTTMNYEFGSYGMEFFPEVPLKQEIDLMEMIYKNP*