AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1146140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1146140 MtrunA17_Chr7g0233031 81.149 1305 165 12 58 1336 1 1250 0.0 1899
Msa1146140 MtrunA17_Chr7g0232971 53.696 1380 475 31 44 1337 1 1302 0.0 1178
Msa1146140 MtrunA17_Chr7g0225791 53.055 1391 401 36 91 1332 1 1288 0.0 1162
Msa1146140 MtrunA17_Chr7g0232991 69.985 663 173 10 696 1337 9 666 0.0 874
Msa1146140 MtrunA17_Chr7g0233001 61.940 536 177 9 811 1332 1 523 0.0 636
Msa1146140 MtrunA17_Chr1g0191141 33.931 725 399 19 639 1318 400 1089 5.42e-109 370
Msa1146140 MtrunA17_Chr7g0224051 33.200 750 410 20 625 1318 389 1103 1.66e-106 365
Msa1146140 MtrunA17_Chr3g0114161 33.469 738 403 22 639 1320 531 1236 3.73e-103 357
Msa1146140 MtrunA17_Chr5g0437621 33.333 741 410 21 632 1320 584 1292 6.28e-101 351
Msa1146140 MtrunA17_Chr2g0320781 65.432 243 80 3 1041 1280 1 242 2.07e-95 306
Msa1146140 MtrunA17_Chr8g0352361 31.318 645 338 23 672 1285 282 852 1.15e-75 270
Msa1146140 MtrunA17_Chr2g0296421 29.369 681 379 22 632 1285 396 1001 2.42e-73 266
Msa1146140 MtrunA17_Chr7g0233021 44.654 477 113 18 53 438 6 422 5.05e-58 220
Msa1146140 MtrunA17_Chr1g0183681 25.903 637 383 20 704 1322 337 902 3.41e-29 127
Msa1146140 MtrunA17_Chr8g0384531 25.963 597 325 21 735 1284 361 887 7.31e-29 125
Msa1146140 MtrunA17_Chr4g0047081 58.228 158 43 7 58 197 1 153 7.59e-29 125
Msa1146140 MtrunA17_Chr1g0163011 26.307 574 294 22 756 1265 190 698 6.75e-27 118
Msa1146140 MtrunA17_Chr4g0052341 24.729 554 317 22 761 1294 745 1218 7.34e-27 119
Msa1146140 MtrunA17_Chr3g0137091 28.535 396 221 13 947 1323 435 787 3.29e-24 110
Msa1146140 MtrunA17_Chr1g0190391 28.794 257 145 7 755 1009 576 796 5.58e-24 109
Msa1146140 MtrunA17_Chr5g0403921 25.272 368 222 9 947 1285 312 655 1.43e-21 101
Msa1146140 MtrunA17_Chr4g0066651 26.979 341 212 9 947 1267 1116 1439 2.75e-21 101
Msa1146140 MtrunA17_Chr7g0224021 44.118 102 54 2 743 844 13 111 9.00e-21 89.4
Msa1146140 MtrunA17_Chr3g0095091 26.431 367 229 12 947 1295 703 1046 3.26e-19 94.7
Msa1146140 MtrunA17_Chr5g0442141 26.158 367 230 12 947 1295 749 1092 6.50e-19 93.6
Msa1146140 MtrunA17_Chr5g0394201 26.608 342 204 12 947 1267 488 803 7.01e-19 93.2
Msa1146140 MtrunA17_Chr7g0232121 25.065 383 223 12 938 1281 164 521 6.70e-18 90.1
Msa1146140 MtrunA17_Chr1g0190381 35.583 163 92 3 1133 1284 189 349 9.34e-18 88.6
Msa1146140 MtrunA17_Chr1g0205891 24.633 341 213 10 947 1267 501 817 4.78e-17 87.4
Msa1146140 MtrunA17_Chr4g0066741 24.789 355 222 9 947 1285 313 638 5.59e-16 84.0
Msa1146140 MtrunA17_Chr2g0286291 24.716 352 226 7 947 1285 316 641 1.30e-15 82.8
Msa1146140 MtrunA17_Chr5g0393461 37.864 103 64 0 1188 1290 591 693 2.55e-14 78.2
Msa1146140 MtrunA17_Chr7g0248031 26.901 342 202 14 947 1256 1119 1444 4.18e-14 78.2
Msa1146140 MtrunA17_Chr7g0224031 29.534 193 111 4 936 1103 43 235 6.94e-14 73.2
Msa1146140 MtrunA17_Chr1g0168031 36.765 136 75 5 1148 1280 1003 1130 3.70e-13 74.7
Msa1146140 MtrunA17_Chr4g0040301 37.500 112 68 2 1191 1301 435 545 3.07e-12 71.2
Msa1146140 MtrunA17_Chr2g0281601 32.192 146 84 3 1145 1285 1145 1280 3.79e-12 71.6
Msa1146140 MtrunA17_Chr1g0175191 30.061 163 109 3 1125 1287 1055 1212 5.13e-12 71.2
Msa1146140 MtrunA17_Chr8g0348721 26.331 338 214 12 947 1260 1111 1437 1.21e-11 70.1
Msa1146140 MtrunA17_Chr4g0024921 32.057 209 120 6 1101 1296 722 921 1.29e-11 69.7
Msa1146140 MtrunA17_Chr7g0255821 36.842 133 75 3 1150 1279 668 794 1.82e-11 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1146140 AT1G05490.1 47.418 736 336 19 635 1338 691 1407 0.0 618
Msa1146140 AT3G24340.1 46.453 719 334 15 629 1335 450 1129 0.0 588
Msa1146140 AT3G42670.2 32.967 728 424 17 632 1320 541 1243 2.62e-99 346
Msa1146140 AT3G42670.3 32.967 728 424 17 632 1320 541 1243 2.62e-99 346
Msa1146140 AT3G42670.1 32.967 728 424 17 632 1320 541 1243 2.62e-99 346
Msa1146140 AT3G42670.4 32.970 734 418 20 632 1320 541 1245 5.20e-99 345
Msa1146140 AT5G20420.1 32.507 726 430 15 632 1320 547 1249 2.04e-95 335
Msa1146140 AT2G21450.3 29.894 659 347 19 672 1285 94 682 1.25e-78 276
Msa1146140 AT2G21450.1 29.894 659 347 19 672 1285 185 773 1.62e-78 278
Msa1146140 AT2G21450.2 29.894 659 347 19 672 1285 192 780 2.38e-78 277
Msa1146140 AT2G16390.2 30.341 646 350 20 672 1285 273 850 2.32e-77 276
Msa1146140 AT2G16390.1 30.341 646 350 20 672 1285 270 847 4.78e-77 275
Msa1146140 AT3G19210.2 23.002 613 333 18 761 1321 180 705 2.68e-27 120
Msa1146140 AT3G19210.1 23.415 615 330 18 761 1321 180 707 4.34e-27 120
Msa1146140 AT3G19210.3 23.415 615 330 18 761 1321 180 707 6.47e-27 119
Msa1146140 AT5G63950.1 25.303 577 316 19 751 1280 367 875 1.12e-26 119
Msa1146140 AT5G63950.2 24.433 573 309 17 751 1280 367 858 9.19e-26 116
Msa1146140 AT4G31900.2 23.315 549 312 15 736 1267 158 614 2.13e-25 115
Msa1146140 AT4G31900.3 23.315 549 312 16 736 1267 199 655 2.27e-25 115
Msa1146140 AT4G31900.1 23.315 549 312 16 736 1267 199 655 2.38e-25 115
Msa1146140 AT5G44800.1 24.957 577 335 23 739 1294 663 1162 1.03e-24 113
Msa1146140 AT1G08600.4 28.112 249 136 7 757 1000 715 925 4.04e-23 107
Msa1146140 AT1G08600.4 35.088 171 97 5 1125 1284 1109 1276 2.64e-18 92.0
Msa1146140 AT1G08600.3 28.112 249 136 7 757 1000 715 925 4.04e-23 107
Msa1146140 AT1G08600.3 35.088 171 97 5 1125 1284 1109 1276 2.64e-18 92.0
Msa1146140 AT1G08600.2 28.112 249 136 7 757 1000 715 925 4.04e-23 107
Msa1146140 AT1G08600.2 35.088 171 97 5 1125 1284 1109 1276 2.64e-18 92.0
Msa1146140 AT2G18760.4 29.008 393 226 15 945 1322 540 894 1.40e-22 105
Msa1146140 AT2G18760.1 29.008 393 226 15 945 1322 540 894 1.40e-22 105
Msa1146140 AT2G18760.2 29.008 393 226 15 945 1322 540 894 1.40e-22 105
Msa1146140 AT2G18760.7 29.008 393 226 15 945 1322 540 894 1.40e-22 105
Msa1146140 AT2G18760.5 29.008 393 226 15 945 1322 540 894 1.40e-22 105
Msa1146140 AT2G18760.6 29.008 393 226 15 945 1322 540 894 1.40e-22 105
Msa1146140 AT2G25170.1 26.415 371 220 11 947 1296 419 757 1.75e-22 105
Msa1146140 AT2G25170.4 26.415 371 220 11 947 1296 419 757 1.75e-22 105
Msa1146140 AT2G18760.3 29.008 393 226 15 945 1322 599 953 2.06e-22 105
Msa1146140 AT2G25170.2 26.344 372 219 12 947 1296 436 774 2.35e-22 105
Msa1146140 AT2G25170.3 26.415 371 220 11 947 1296 445 783 2.52e-22 105
Msa1146140 AT2G13370.1 23.917 577 332 20 761 1313 625 1118 3.56e-22 104
Msa1146140 AT2G13370.2 23.917 577 332 20 761 1313 625 1118 3.56e-22 104
Msa1146140 AT2G13370.3 23.917 577 332 20 761 1313 625 1118 3.56e-22 104
Msa1146140 AT2G44980.1 26.316 399 233 13 938 1304 170 539 1.03e-20 99.4
Msa1146140 AT2G28290.6 26.056 426 263 12 947 1336 882 1291 2.83e-19 95.5
Msa1146140 AT2G28290.3 26.056 426 263 12 947 1336 881 1290 2.88e-19 95.5
Msa1146140 AT2G28290.4 26.056 426 263 12 947 1336 881 1290 2.88e-19 95.5
Msa1146140 AT2G28290.5 26.056 426 263 12 947 1336 882 1291 3.16e-19 95.5
Msa1146140 AT2G28290.1 26.056 426 263 12 947 1336 881 1290 3.24e-19 95.5
Msa1146140 AT2G28290.2 26.056 426 263 12 947 1336 881 1290 3.26e-19 95.5
Msa1146140 AT5G66750.1 25.000 428 240 14 939 1323 321 710 8.91e-19 93.2
Msa1146140 AT1G08600.1 35.088 171 97 5 1125 1284 1088 1255 2.91e-18 92.0
Msa1146140 AT2G44980.3 25.485 412 233 15 938 1304 175 557 5.17e-17 87.4
Msa1146140 AT2G44980.2 25.485 412 233 15 938 1304 176 558 5.88e-17 87.4
Msa1146140 AT5G19310.2 25.581 344 206 14 947 1267 246 562 7.82e-17 86.7
Msa1146140 AT5G19310.1 25.581 344 206 14 947 1267 510 826 9.49e-17 86.7
Msa1146140 AT3G06010.1 26.100 341 208 13 947 1267 528 844 1.48e-16 86.3
Msa1146140 AT5G18620.2 24.432 352 227 8 947 1285 319 644 1.68e-15 82.8
Msa1146140 AT5G18620.1 24.432 352 227 8 947 1285 319 644 1.72e-15 82.8
Msa1146140 AT2G02090.1 24.047 341 187 10 756 1088 208 484 4.94e-14 77.8
Msa1146140 AT2G02090.1 35.246 122 64 3 1149 1265 605 716 7.91e-13 73.9
Msa1146140 AT5G05130.1 34.969 163 92 5 1148 1307 725 876 8.05e-14 77.0
Msa1146140 AT5G43530.1 36.842 152 81 5 1149 1298 1128 1266 1.63e-13 76.3
Msa1146140 AT1G61140.1 31.034 145 92 4 1149 1293 1124 1260 2.64e-12 72.4
Msa1146140 AT1G61140.3 31.034 145 92 4 1149 1293 966 1102 4.13e-12 71.6
Msa1146140 AT1G03750.1 39.796 98 58 1 1191 1288 583 679 4.22e-12 71.6
Msa1146140 AT2G46020.5 25.000 356 191 15 947 1256 1105 1430 2.62e-11 69.3
Msa1146140 AT2G46020.1 25.000 356 191 15 947 1256 1105 1430 2.62e-11 69.3
Msa1146140 AT2G46020.6 25.000 356 191 15 947 1256 1105 1430 2.62e-11 69.3
Msa1146140 AT2G46020.2 25.000 356 191 15 947 1256 1106 1431 2.74e-11 69.3
Msa1146140 AT2G46020.3 25.000 356 191 15 947 1256 1106 1431 2.74e-11 69.3
Msa1146140 AT2G46020.4 25.000 356 191 15 947 1256 1106 1431 2.74e-11 69.3

Find 249 sgRNAs with CRISPR-Local

Find 346 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGCATCTAAAGAATGTATT+TGG 0.143154 7_4:-23263559 Msa1146140:CDS
TACATTGATCTTTGATATTA+AGG 0.155995 7_4:-23263360 Msa1146140:CDS
AAGGAAATCCTCTTCATTTC+TGG 0.159017 7_4:-23263080 Msa1146140:CDS
AAAGGTTTGGACTCTGTTTC+TGG 0.165338 7_4:-23267392 Msa1146140:CDS
CAATAACCGGCAAGCATTTC+GGG 0.190499 7_4:+23264152 None:intergenic
TTTGACCTTGGATTTGAATT+TGG 0.194748 7_4:+23265941 None:intergenic
ATCATTGAAGGTATCGATTA+AGG 0.209748 7_4:+23263037 None:intergenic
CAATATGTTGGTTTAGATAT+TGG 0.238238 7_4:-23266270 Msa1146140:CDS
CGAAAGCGAATCATCCTTTC+TGG 0.248144 7_4:-23263701 Msa1146140:CDS
GGAGAAAAGAAAAGAAATTA+TGG 0.249287 7_4:-23263828 Msa1146140:CDS
ACCAACATTGTCTTCGGATT+TGG 0.252303 7_4:+23266314 None:intergenic
TGAGAAGGAGGAGAAGAAAA+AGG 0.259022 7_4:-23266580 Msa1146140:CDS
ATGTTGTTAATTTGCTTAAT+TGG 0.263774 7_4:-23264024 Msa1146140:CDS
CAAGCAGTTAAAATTGCTTA+TGG 0.271269 7_4:-23263513 Msa1146140:CDS
TTTCTTTCACATCAGGAATT+AGG 0.274570 7_4:+23264359 None:intergenic
ATACAGCATCTTCTTCTCTA+AGG 0.280917 7_4:+23265430 None:intergenic
AAGAAGGCTTTGAATTCATT+TGG 0.281224 7_4:-23264318 Msa1146140:CDS
AGCCTTGTCTTCCCGGTTCC+AGG 0.281825 7_4:+23264211 None:intergenic
GCAACATTGACACTGTTATT+AGG 0.282663 7_4:+23265906 None:intergenic
ATGATAACCTTAGCATTATT+AGG 0.288514 7_4:+23267167 None:intergenic
CTGCGAGTTTGTTGCATACT+TGG 0.292067 7_4:-23264123 Msa1146140:CDS
CTTCATTTCTGGAGAGATAA+AGG 0.299402 7_4:-23263069 Msa1146140:CDS
TACAGCCAGCCTTGTCTTCC+CGG 0.299988 7_4:+23264204 None:intergenic
ATTAGTAGAGCTTATAGAAT+TGG 0.303415 7_4:-23262888 Msa1146140:CDS
ATACCGCTTCTGATTCTCTA+AGG 0.304791 7_4:+23266151 None:intergenic
TTGAACAATCGTGAGTTATC+TGG 0.306210 7_4:-23264061 Msa1146140:CDS
ACAATAACCGGCAAGCATTT+CGG 0.307386 7_4:+23264151 None:intergenic
GAGCGAGAATTTGAGAGTTT+TGG 0.309571 7_4:-23262627 Msa1146140:CDS
TACAAAGAAAAGAGCATTCT+TGG 0.312504 7_4:-23263947 Msa1146140:CDS
GGAATCAGATAAAGAGAAAA+TGG 0.315995 7_4:-23265811 Msa1146140:CDS
GACAATTCCTCCCTCTTTGT+TGG 0.320762 7_4:-23264451 Msa1146140:CDS
TCTTCTTCCGGAACCTTCAT+TGG 0.320905 7_4:+23264492 None:intergenic
GAAGTTGATTAGAGAGGTTA+TGG 0.321399 7_4:-23266529 Msa1146140:CDS
GATGAACATTCTATTGGTTT+TGG 0.325126 7_4:-23267014 Msa1146140:CDS
ATAGTTCCATGAAGTTGTTC+TGG 0.329498 7_4:+23263669 None:intergenic
CATCTCTTGTTTGTGATGGC+TGG 0.330931 7_4:-23267521 None:intergenic
ATCTCCCATGCTCCTGGAAC+CGG 0.331773 7_4:-23264223 Msa1146140:CDS
TTCTGGTTCTAAGAAAATAA+AGG 0.332879 7_4:-23267219 Msa1146140:CDS
TCTGCTCGAACGCGACCTTT+TGG 0.334667 7_4:-23263309 Msa1146140:CDS
CTCGTAATGAAGGCACTGTT+TGG 0.338529 7_4:-23264384 Msa1146140:CDS
AACTTCTTGGTAAATGCCTC+TGG 0.339838 7_4:-23265653 Msa1146140:CDS
TCCTTTCCAGAACAACTTCA+TGG 0.341793 7_4:-23263675 Msa1146140:CDS
ATAATAGATAAAGATGAAAA+TGG 0.342921 7_4:-23266840 Msa1146140:CDS
ATTTCGCCAACAGGCCAAAA+AGG 0.343671 7_4:-23262805 Msa1146140:CDS
TCATCACTCTTTCGCCGCTT+TGG 0.344661 7_4:+23267422 None:intergenic
CTCTCAAATTCTCGCTCCTT+CGG 0.349511 7_4:+23262633 None:intergenic
GATTCCTTCTTCTTCACAAT+AGG 0.349981 7_4:+23265747 None:intergenic
ATTGACACTGTTATTAGGTT+TGG 0.351198 7_4:+23265911 None:intergenic
TTGGGTTTACTTGAACTTCT+TGG 0.355283 7_4:-23265666 Msa1146140:CDS
ACTCTTTCGCCGCTTTGGTT+TGG 0.358819 7_4:+23267427 None:intergenic
ATCCTTCTAAAGATGCTTCC+CGG 0.359831 7_4:-23263461 Msa1146140:CDS
TTTGGCATTGTCTTTGACCT+TGG 0.361764 7_4:+23265929 None:intergenic
TCATCTGAACATATTGAAAT+CGG 0.361992 7_4:+23267053 None:intergenic
TTTCTTTAACTTGCGAAGAT+TGG 0.364731 7_4:+23264276 None:intergenic
ACGAATATGGAGCCTTAAAA+AGG 0.367602 7_4:-23265520 Msa1146140:CDS
AGCAAGAATGTTCCACTGTT+TGG 0.371356 7_4:-23267479 Msa1146140:CDS
AGACACCTCATGAACGAATA+TGG 0.372748 7_4:-23265533 Msa1146140:CDS
TGTTGAAAATGATATGAGTT+TGG 0.374496 7_4:-23267249 Msa1146140:CDS
AGTGTAAAGGACTGAGGAAT+TGG 0.379297 7_4:+23263150 None:intergenic
TCAATATGTTCAGATGAGTA+TGG 0.380047 7_4:-23267047 Msa1146140:CDS
ATTCCTTCTTCTTCACAATA+GGG 0.383153 7_4:+23265748 None:intergenic
ACCCGGGAAGCATCTTTAGA+AGG 0.383446 7_4:+23263459 None:intergenic
AATGTTCTACGTCAAATTCC+TGG 0.387327 7_4:-23263803 Msa1146140:CDS
AGAATCAGAAGCGGTATCTA+AGG 0.390797 7_4:-23266145 Msa1146140:intron
TTCCTGCTCTTCCTCCTCCT+TGG 0.396544 7_4:+23265479 None:intergenic
CGATTGTTCAAATTGTGAAA+TGG 0.397076 7_4:+23264073 None:intergenic
GGAACCGTTATGGGATGAAT+TGG 0.399295 7_4:-23265460 Msa1146140:CDS
CACAATTGAATCATCCTTAA+CGG 0.399346 7_4:+23265617 None:intergenic
GGAAGTGCTATGGGATGAAT+TGG 0.401925 7_4:-23266181 Msa1146140:CDS
AAGAGTGATGAAGATGATAA+AGG 0.403561 7_4:-23267410 Msa1146140:CDS
AGGAAGAGCAGGAACCGTTA+TGG 0.403582 7_4:-23265470 Msa1146140:CDS
CTTCTTCCGGAACCTTCATT+GGG 0.405938 7_4:+23264493 None:intergenic
CTCGCAGGAGCAACAATAAC+CGG 0.407574 7_4:+23264139 None:intergenic
TGCATTATCTCCCATGCTCC+TGG 0.408677 7_4:-23264229 Msa1146140:CDS
AGCTCGTGTGACATTGTGTT+AGG 0.409584 7_4:+23263614 None:intergenic
TTAGTAGAGCTTATAGAATT+GGG 0.411944 7_4:-23262887 Msa1146140:CDS
TGTTGAGAAAAGATGTCGTT+TGG 0.417840 7_4:-23267087 Msa1146140:CDS
AGTAAGAGTGTTCCGTTGTT+TGG 0.421428 7_4:-23267350 Msa1146140:CDS
AGTGATGATGAACATTCTAT+TGG 0.421593 7_4:-23267020 Msa1146140:CDS
GAGAAGCTAGCCGGAGGAGG+AGG 0.422968 7_4:-23263905 Msa1146140:CDS
TAGTCCCTTCAGTGAGTAGA+TGG 0.423551 7_4:+23262841 None:intergenic
AGAATCACCAACATTGTCTT+CGG 0.425797 7_4:+23266308 None:intergenic
AGACATGTTTGTTGAGTGTT+TGG 0.426279 7_4:-23262661 Msa1146140:CDS
TATGTCAAAGGTTTAGATGA+TGG 0.428769 7_4:-23265858 Msa1146140:CDS
GGAAGAGCAGGAACCGTTAT+GGG 0.429605 7_4:-23265469 Msa1146140:CDS
AGCATCTAAAGAATGTATTT+GGG 0.430608 7_4:-23263558 Msa1146140:CDS
TATTAAACTCGTCTTTAGAA+TGG 0.431116 7_4:-23263112 Msa1146140:CDS
GTGCGATAAATTTCGCCAAC+AGG 0.431689 7_4:-23262814 Msa1146140:CDS
AGTTTCATTGCTTCAAATGA+AGG 0.434157 7_4:-23265832 Msa1146140:CDS
ACGTCAAATTCCTGGTTTGT+TGG 0.435167 7_4:-23263795 Msa1146140:CDS
AATGTTGCTGACTGTGATAA+TGG 0.438411 7_4:-23265891 Msa1146140:CDS
AGATGTCCCAATGAAGGTTC+CGG 0.440294 7_4:-23264499 Msa1146140:CDS
TCAGCTTGGTTGGAGCTTCA+AGG 0.445323 7_4:-23262959 Msa1146140:CDS
AGTAAAGGTAGTGGAGGAAA+TGG 0.449226 7_4:-23266930 Msa1146140:CDS
CTCTAGTACCTACGTGAAGA+AGG 0.450176 7_4:-23266442 Msa1146140:CDS
GAGAAAAGAAAAGAAATTAT+GGG 0.450956 7_4:-23263827 Msa1146140:CDS
AGAAGATGATGATGTTAAAG+AGG 0.452570 7_4:-23266970 Msa1146140:CDS
GAAGAAGGAATCAGATAGGC+AGG 0.454659 7_4:-23266214 Msa1146140:CDS
GACATTGTGTTAGGAAAAGA+AGG 0.456483 7_4:+23263623 None:intergenic
TCTTCCCGGTTCCAGGAGCA+TGG 0.457877 7_4:+23264218 None:intergenic
TAAGGATGATTCAATTGTGT+TGG 0.461701 7_4:-23265613 Msa1146140:CDS
AAATTCTTGATCGGATGATT+CGG 0.462881 7_4:-23262698 Msa1146140:CDS
AACAAAGGAAGGGACTATAA+AGG 0.464103 7_4:-23265783 Msa1146140:CDS
TGATGAAGATGATAAAGGTT+TGG 0.464275 7_4:-23267405 Msa1146140:CDS
TTCAATTGTGTTGGAGATGA+AGG 0.464569 7_4:-23265604 Msa1146140:CDS
GGAAGAGAAGGAAGTGCTAT+GGG 0.464638 7_4:-23266190 Msa1146140:CDS
TCCGAGGGAATCAGCTTGGT+TGG 0.467796 7_4:-23262969 Msa1146140:CDS
TTCAACAAGTACTGATGAGT+TGG 0.468309 7_4:-23266490 Msa1146140:CDS
ACTAATTTCTCTCGTAATGA+AGG 0.468946 7_4:-23264394 Msa1146140:CDS
CAGCTTGGTTGGAGCTTCAA+GGG 0.469327 7_4:-23262958 Msa1146140:CDS
ATCAAACAAAGCTCTTCTTC+CGG 0.471008 7_4:+23264480 None:intergenic
AGATATTGGAGGAGTTTCTT+CGG 0.471460 7_4:-23266256 Msa1146140:CDS
AACCAAGGAGGAGGAAGAGC+AGG 0.471534 7_4:-23265481 Msa1146140:CDS
TCCTCCTTCTCATCAACATA+AGG 0.473565 7_4:+23266591 None:intergenic
TCGTAATGAAGGCACTGTTT+GGG 0.480020 7_4:-23264383 Msa1146140:CDS
TTGGAATAAAATGATACATC+AGG 0.481520 7_4:+23267446 None:intergenic
AGTGTTCCCGAAATGCTTGC+CGG 0.484783 7_4:-23264158 Msa1146140:CDS
TTTCACAAGAAAATTCTTGA+GGG 0.484811 7_4:-23263401 Msa1146140:CDS
CAAGGAAAAGATCAATATGT+TGG 0.493990 7_4:-23266282 Msa1146140:CDS
TCAAGTAAACCCAACTCCTT+CGG 0.494113 7_4:+23265675 None:intergenic
GAAGATGATGATGTTAAAGA+GGG 0.495334 7_4:-23266969 Msa1146140:CDS
GGAAAAGAAAATTATGTCAA+AGG 0.498229 7_4:-23265870 Msa1146140:CDS
TGCGAGTTTGTTGCATACTT+GGG 0.498592 7_4:-23264122 Msa1146140:CDS
GGTTTGTTGGTGTTTGATGA+AGG 0.501569 7_4:-23263782 Msa1146140:CDS
CATCTGAACATATTGAAATC+GGG 0.501707 7_4:+23267054 None:intergenic
TTGTTTGGTTGTCTTTCTGA+CGG 0.503566 7_4:-23267293 Msa1146140:CDS
TGTTGTTCCTAATAATGCTA+AGG 0.504802 7_4:-23267174 Msa1146140:CDS
TTGTACTACTCGATGTCGTA+TGG 0.505967 7_4:-23262935 Msa1146140:CDS
TACGAGAAGCTAGCCGGAGG+AGG 0.508071 7_4:-23263908 Msa1146140:CDS
TATGTTGGTTTAGATATTGG+AGG 0.508204 7_4:-23266267 Msa1146140:CDS
GCATTATTAGGAACAACAAA+AGG 0.509302 7_4:+23267179 None:intergenic
TGCTCTATAATTAAGTGTAA+AGG 0.511152 7_4:+23263137 None:intergenic
GCTGGCTGTAGTATTTCTCA+TGG 0.511590 7_4:-23264191 Msa1146140:CDS
TCCTTCTAAAGATGCTTCCC+GGG 0.512038 7_4:-23263460 Msa1146140:CDS
TAGAAAAGATTTCAATGTGG+TGG 0.513061 7_4:-23266553 Msa1146140:CDS
CTCTCCTTATGTTGATGAGA+AGG 0.515310 7_4:-23266595 Msa1146140:CDS
TGGAACCGGGAAGACAAGGC+TGG 0.515645 7_4:-23264209 Msa1146140:CDS
TATCCCTATTGTGAAGAAGA+AGG 0.515702 7_4:-23265751 Msa1146140:CDS
AAGGATGAAAGTAAAGGTAG+TGG 0.517161 7_4:-23266939 Msa1146140:CDS
AGAAGCTAGCCGGAGGAGGA+GGG 0.517996 7_4:-23263904 Msa1146140:CDS
AAAGAAAGCCGTTCCTTGCA+AGG 0.520260 7_4:-23264260 Msa1146140:CDS
AACAGAAGAAGGAATCAGAT+AGG 0.520298 7_4:-23266218 Msa1146140:CDS
TCTCATAAAAGTGTAAATGT+TGG 0.520561 7_4:-23266345 Msa1146140:CDS
TCAAAGCCTTCTTGTTGATG+AGG 0.523503 7_4:+23264328 None:intergenic
AACAAAGCAAGAACAGAAGA+AGG 0.523573 7_4:-23266229 Msa1146140:CDS
CAGACTCCTCTTCTTCCAAA+AGG 0.525751 7_4:+23263294 None:intergenic
GGGAATCTGACGATGAGAGA+GGG 0.526121 7_4:-23263883 Msa1146140:CDS
GAGAAAATGGTGGAGAACAA+AGG 0.531470 7_4:-23265798 Msa1146140:CDS
GTCAGATTCCCCTCCTCCTC+CGG 0.531898 7_4:+23263895 None:intergenic
TTGAAGATAAAATTCTTGAT+CGG 0.533068 7_4:-23262707 Msa1146140:CDS
TCTCAGTTCAATGTTTCTGA+TGG 0.533625 7_4:-23264427 Msa1146140:CDS
GAAGCTAGCCGGAGGAGGAG+GGG 0.536026 7_4:-23263903 Msa1146140:CDS
GGTGGAGAAGTTGATTAGAG+AGG 0.537870 7_4:-23266535 Msa1146140:CDS
CTCCTGGAACCGGGAAGACA+AGG 0.539502 7_4:-23264213 Msa1146140:CDS
TCTCCCATGCTCCTGGAACC+GGG 0.539737 7_4:-23264222 Msa1146140:CDS
GGACGACAAGAATACCGTTA+AGG 0.539760 7_4:-23265631 Msa1146140:CDS
CAAATATATCTCAGAACTAG+TGG 0.540724 7_4:-23265068 Msa1146140:intron
CTTTCACAAGAAAATTCTTG+AGG 0.541218 7_4:-23263402 Msa1146140:CDS
ATCAGATAAAGAGAAAATGG+TGG 0.546238 7_4:-23265808 Msa1146140:CDS
ATGTGTGCTGCGTTTGATGC+CGG 0.548742 7_4:-23263429 Msa1146140:CDS
TACAGCATCTTCTTCTCTAA+GGG 0.549753 7_4:+23265431 None:intergenic
TCCATGAAGTTGTTCTGGAA+AGG 0.550951 7_4:+23263674 None:intergenic
TGCCAGAATGAAATGTCAGA+GGG 0.551143 7_4:-23265990 Msa1146140:intron
CCCTTTGTTCATGTTCACAA+AGG 0.552353 7_4:-23263488 Msa1146140:CDS
AGTCTGTTCTTGACAAGGAC+CGG 0.552361 7_4:-23263277 Msa1146140:CDS
TTATCTCTCCAGAAATGAAG+AGG 0.552541 7_4:+23263072 None:intergenic
TTTCTGACGGTTCATCGAAA+CGG 0.552685 7_4:-23267280 Msa1146140:CDS
CCTTTGTGAACATGAACAAA+GGG 0.553918 7_4:+23263488 None:intergenic
AAATGGTGGAGAACAAAGGA+AGG 0.558983 7_4:-23265794 Msa1146140:CDS
TTGTTCCGAGGGAATCAGCT+TGG 0.560799 7_4:-23262973 Msa1146140:CDS
GATGATAGATGTCCCAATGA+AGG 0.561022 7_4:-23264505 Msa1146140:CDS
ATGATAATAAGGAGGAGTTG+AGG 0.562538 7_4:-23262746 Msa1146140:CDS
TCTGGAAAGGAGTTCCAGAA+AGG 0.562873 7_4:+23263687 None:intergenic
GGGAAGAGAAGGAAGTGCTA+TGG 0.566242 7_4:-23266191 Msa1146140:CDS
AGGCTCCATATTCGTTCATG+AGG 0.568406 7_4:+23265528 None:intergenic
CTTCCCGGTTCCAGGAGCAT+GGG 0.568762 7_4:+23264219 None:intergenic
GCCACCCTCCTTGCAAGGAA+CGG 0.570680 7_4:+23264252 None:intergenic
TGTTGATGAAAAGTGTGGCT+TGG 0.573820 7_4:-23266880 Msa1146140:CDS
GAAGAAGAAGAACACTCTGT+TGG 0.577041 7_4:-23266807 Msa1146140:CDS
TCCAACCAAGCTGATTCCCT+CGG 0.578345 7_4:+23262968 None:intergenic
TGTTGCCAAATTCAAATCCA+AGG 0.578682 7_4:-23265946 Msa1146140:CDS
ATGCAGCCACCCTCCTTGCA+AGG 0.578908 7_4:+23264247 None:intergenic
GATGAAAGTAAAGGTAGTGG+AGG 0.582813 7_4:-23266936 Msa1146140:CDS
AGAAGAAGATGCTGTATCCA+AGG 0.584028 7_4:-23265424 Msa1146140:intron
TTGTGTTCACAACAAGATGA+TGG 0.584332 7_4:+23265154 None:intergenic
TCCTTATGTTGATGAGAAGG+AGG 0.587238 7_4:-23266592 Msa1146140:CDS
AGAAGGAATCAGATAGGCAG+GGG 0.587577 7_4:-23266212 Msa1146140:CDS
ACTTCTTGGTAAATGCCTCT+GGG 0.587698 7_4:-23265652 Msa1146140:CDS
TTCACAAGAAAATTCTTGAG+GGG 0.587824 7_4:-23263400 Msa1146140:CDS
AAGGAATCTATTGATAACAA+TGG 0.588038 7_4:-23265732 Msa1146140:CDS
CAAGTATGCAACAAACTCGC+AGG 0.588500 7_4:+23264124 None:intergenic
TTATATCCTCATCAACAAGA+AGG 0.590261 7_4:-23264334 Msa1146140:CDS
TTTAGAATGGACGATGGAGA+AGG 0.591170 7_4:-23263099 Msa1146140:CDS
TGAGTGTTTGGTACAACCGA+AGG 0.591261 7_4:-23262649 Msa1146140:CDS
GGGGAATCTGACGATGAGAG+AGG 0.593009 7_4:-23263884 Msa1146140:CDS
AAAGCCGTTCCTTGCAAGGA+GGG 0.594696 7_4:-23264256 Msa1146140:CDS
CTTCTTCACGTAGGTACTAG+AGG 0.595898 7_4:+23266443 None:intergenic
GTCAAAGGTTTAGATGATGG+AGG 0.598577 7_4:-23265855 Msa1146140:CDS
ACATACCATCTACTCACTGA+AGG 0.603340 7_4:-23262846 Msa1146140:CDS
TAAACTGAATGGAGTATCAG+AGG 0.603673 7_4:-23266409 Msa1146140:CDS
TCTAGTACCTACGTGAAGAA+GGG 0.603750 7_4:-23266441 Msa1146140:CDS
GCCAAATCCGAAGACAATGT+TGG 0.604282 7_4:-23266315 Msa1146140:CDS
TACCGCTTCTGATTCTCTAA+GGG 0.604833 7_4:+23266152 None:intergenic
GCCTTTGTGAACATGAACAA+AGG 0.605674 7_4:+23263487 None:intergenic
TCTTTGATATTAAGGAGACA+AGG 0.606709 7_4:-23263352 Msa1146140:CDS
AAGAAGGAATCAGATAGGCA+GGG 0.607401 7_4:-23266213 Msa1146140:CDS
AATGTTGGTGATTCTGAACA+AGG 0.607416 7_4:-23266300 Msa1146140:CDS
CATACCATCTACTCACTGAA+GGG 0.608568 7_4:-23262845 Msa1146140:CDS
AGTTTGTACGAGAAGCTAGC+CGG 0.611168 7_4:-23263914 Msa1146140:CDS
TAGTATAGATACAATGCGGA+TGG 0.613033 7_4:-23263987 Msa1146140:CDS
TTAGAGACAGAAGAAGCTAG+TGG 0.614227 7_4:-23265181 Msa1146140:CDS
TCATCAAACACCAACAAACC+AGG 0.614305 7_4:+23263785 None:intergenic
GTGTTGGAGATGAAGGATGT+TGG 0.615392 7_4:-23265597 Msa1146140:CDS
CTTTGATATTAAGGAGACAA+GGG 0.616091 7_4:-23263351 Msa1146140:CDS
GAAAGCGAAGAGTGTTGATG+TGG 0.616294 7_4:-23266382 Msa1146140:CDS
GAACTGAGAGCCAACAAAGA+GGG 0.617506 7_4:+23264441 None:intergenic
TTTCTGGAGAGATAAAGGAC+AGG 0.620313 7_4:-23263064 Msa1146140:CDS
GCCGTTCCTTGCAAGGAGGG+TGG 0.620503 7_4:-23264253 Msa1146140:CDS
TGAGGTGTCTTAACACAAGT+CGG 0.625580 7_4:+23265546 None:intergenic
GAGGTTATGGATAGACAATG+TGG 0.628031 7_4:-23266516 Msa1146140:CDS
CTTAGATTGAACCCCTACGC+AGG 0.630121 7_4:-23263245 Msa1146140:CDS
GTATCCAATTCATCCCATAA+CGG 0.631016 7_4:+23265456 None:intergenic
ATGCCAGAATGAAATGTCAG+AGG 0.634620 7_4:-23265991 Msa1146140:intron
AACTTTGTTGATGAAAAGTG+TGG 0.635209 7_4:-23266885 Msa1146140:CDS
CGGTATTCTTGTCGTCCCAG+AGG 0.635229 7_4:+23265637 None:intergenic
TCGCGTTCGAGCAGAAGAGA+CGG 0.636240 7_4:+23263317 None:intergenic
GGATGGTGAAACTGATTTCG+TGG 0.639938 7_4:-23263970 Msa1146140:CDS
GGAATCTGACGATGAGAGAG+GGG 0.642625 7_4:-23263882 Msa1146140:CDS
CTGAGAGCCAACAAAGAGGG+AGG 0.650876 7_4:+23264444 None:intergenic
GTTCGAGCAGAAGAGACGGA+TGG 0.654372 7_4:+23263321 None:intergenic
TTGTACGAGAAGCTAGCCGG+AGG 0.655781 7_4:-23263911 Msa1146140:CDS
TATTTGGGAACCAGTTCCTG+AGG 0.658085 7_4:-23263543 Msa1146140:CDS
TGAACTGAGAGCCAACAAAG+AGG 0.659393 7_4:+23264440 None:intergenic
CTCGTCTTTAGAATGGACGA+TGG 0.664269 7_4:-23263105 Msa1146140:CDS
GAAAGCCGTTCCTTGCAAGG+AGG 0.668406 7_4:-23264257 Msa1146140:CDS
TAATTAAGTGTAAAGGACTG+AGG 0.669596 7_4:+23263144 None:intergenic
GGAGAAATGCTACCAAACAG+TGG 0.672911 7_4:+23267467 None:intergenic
AGAGGAGTCTGTTCTTGACA+AGG 0.676180 7_4:-23263282 Msa1146140:CDS
TGAATGGAGTATCAGAGGCG+CGG 0.680045 7_4:-23266404 Msa1146140:CDS
AGAAGAACCCTTCTTCACGT+AGG 0.695396 7_4:+23266434 None:intergenic
AATGGTGGAGAACAAAGGAA+GGG 0.695497 7_4:-23265793 Msa1146140:CDS
AGCCCTTAGAGAATCAGAAG+CGG 0.702786 7_4:-23266154 Msa1146140:CDS
GAAGGAATCAGATAGGCAGG+GGG 0.704745 7_4:-23266211 Msa1146140:CDS
CTGCTAGAAACACCAAACAA+CGG 0.712940 7_4:+23267338 None:intergenic
GGTGTCTTAACACAAGTCGG+TGG 0.717232 7_4:+23265549 None:intergenic
GCCAGAATGAAATGTCAGAG+GGG 0.725846 7_4:-23265989 Msa1146140:intron
GATGATGATGATGTTAACGA+AGG 0.729705 7_4:-23266762 Msa1146140:CDS
TTATAGAAAAGATTTCAATG+TGG 0.732565 7_4:-23266556 Msa1146140:CDS
AGCATAGTATAGATACAATG+CGG 0.747403 7_4:-23263991 Msa1146140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAGATAAAGATGAAAA+TGG - chr7_4:23263271-23263290 Msa1146140:CDS 15.0%
!!! AATTTTAATTTGTGAACTAT+AGG - chr7_4:23264032-23264051 Msa1146140:CDS 15.0%
!! TTATTCATTTGTTTAAACTT+TGG - chr7_4:23264085-23264104 Msa1146140:CDS 15.0%
!!! AAATTTTAATGTTCTTAAAG+AGG + chr7_4:23264720-23264739 None:intergenic 15.0%
!! TTGTTTATATGTTTAAACTT+TGG - chr7_4:23264813-23264832 Msa1146140:intron 15.0%
!!! ATAAAAACTAGTTTAAGTTT+TGG - chr7_4:23265293-23265312 Msa1146140:intron 15.0%
!! TTATAGAAAAGATTTCAATG+TGG - chr7_4:23263555-23263574 Msa1146140:CDS 20.0%
!!! ATAACAATGGTTTTAATCAA+AGG - chr7_4:23264392-23264411 Msa1146140:CDS 20.0%
!!! TAACAATGGTTTTAATCAAA+GGG - chr7_4:23264393-23264412 Msa1146140:CDS 20.0%
!!! AATGTTAATTTGTGAACTAT+AGG - chr7_4:23264754-23264773 Msa1146140:intron 20.0%
!!! TAGTTTAAGTTTTGGATTTT+TGG - chr7_4:23265301-23265320 Msa1146140:intron 20.0%
!! ATCTCAAAACAAGAAATTTA+TGG + chr7_4:23265466-23265485 None:intergenic 20.0%
!!! ATGTTGTTAATTTGCTTAAT+TGG - chr7_4:23266087-23266106 Msa1146140:intron 20.0%
!! GAGAAAAGAAAAGAAATTAT+GGG - chr7_4:23266284-23266303 Msa1146140:CDS 20.0%
!!! ATTCTTTAGATGCTTTTTTA+TGG + chr7_4:23266547-23266566 None:intergenic 20.0%
!! TACATTGATCTTTGATATTA+AGG - chr7_4:23266751-23266770 Msa1146140:CDS 20.0%
!! TAAAAATGATGATAATAAGG+AGG - chr7_4:23267357-23267376 Msa1146140:CDS 20.0%
!! TTGAAGATAAAATTCTTGAT+CGG - chr7_4:23267404-23267423 Msa1146140:CDS 20.0%
! TTGGAATAAAATGATACATC+AGG + chr7_4:23262668-23262687 None:intergenic 25.0%
!! AGCAAAAATGTGTTATTGTT+TGG - chr7_4:23262803-23262822 Msa1146140:CDS 25.0%
! TGTTGAAAATGATATGAGTT+TGG - chr7_4:23262862-23262881 Msa1146140:CDS 25.0%
!!! TTCTGGTTCTAAGAAAATAA+AGG - chr7_4:23262892-23262911 Msa1146140:CDS 25.0%
! ATGATAACCTTAGCATTATT+AGG + chr7_4:23262947-23262966 None:intergenic 25.0%
! TCATCTGAACATATTGAAAT+CGG + chr7_4:23263061-23263080 None:intergenic 25.0%
! GTAAAAAAGGATGAAAGTAA+AGG - chr7_4:23263166-23263185 Msa1146140:CDS 25.0%
!!! TAGTGATGATTTTAAAGTTG+AGG - chr7_4:23263450-23263469 Msa1146140:CDS 25.0%
!! TCTCATAAAAGTGTAAATGT+TGG - chr7_4:23263766-23263785 Msa1146140:CDS 25.0%
!!! CAATATGTTGGTTTAGATAT+TGG - chr7_4:23263841-23263860 Msa1146140:CDS 25.0%
! GGAAAAGAAAATTATGTCAA+AGG - chr7_4:23264241-23264260 Msa1146140:CDS 25.0%
!! AAGGAATCTATTGATAACAA+TGG - chr7_4:23264379-23264398 Msa1146140:CDS 25.0%
!!! AACAATGGTTTTAATCAAAG+GGG - chr7_4:23264394-23264413 Msa1146140:CDS 25.0%
!!! TGAATATACCGCTATTTTTT+AGG - chr7_4:23265217-23265236 Msa1146140:intron 25.0%
! AGTGAAAAGAAATTACCATA+AGG + chr7_4:23265356-23265375 None:intergenic 25.0%
!! GTTTGCATTCTTTTCTTTTT+TGG - chr7_4:23265383-23265402 Msa1146140:intron 25.0%
! TTATATCATCCTGTTATTCA+AGG - chr7_4:23265494-23265513 Msa1146140:CDS 25.0%
! ACTGAGATATATGTGATAAA+AGG - chr7_4:23265543-23265562 Msa1146140:CDS 25.0%
!! TATAACTTTTCTTTCACATC+AGG + chr7_4:23265762-23265781 None:intergenic 25.0%
! TGAATTCATTTGGAAAAACT+TGG - chr7_4:23265803-23265822 Msa1146140:CDS 25.0%
! AAAGAAAAAACAATCAAGTG+TGG - chr7_4:23266262-23266281 Msa1146140:CDS 25.0%
! GGAGAAAAGAAAAGAAATTA+TGG - chr7_4:23266283-23266302 Msa1146140:CDS 25.0%
!!! ATACCACTTTTTTTGTTTCT+TGG + chr7_4:23266362-23266381 None:intergenic 25.0%
! GAAACAAAAAAAGTGGTATT+TGG - chr7_4:23266363-23266382 Msa1146140:CDS 25.0%
! AAGCATCTAAAGAATGTATT+TGG - chr7_4:23266552-23266571 Msa1146140:CDS 25.0%
! AGCATCTAAAGAATGTATTT+GGG - chr7_4:23266553-23266572 Msa1146140:CDS 25.0%
! TTTCACAAGAAAATTCTTGA+GGG - chr7_4:23266710-23266729 Msa1146140:CDS 25.0%
!! TGTCAAAACAAAGTTTTTGT+TGG - chr7_4:23266889-23266908 Msa1146140:CDS 25.0%
! TGCTCTATAATTAAGTGTAA+AGG + chr7_4:23266977-23266996 None:intergenic 25.0%
!! TATTAAACTCGTCTTTAGAA+TGG - chr7_4:23266999-23267018 Msa1146140:CDS 25.0%
! ATTAGTAGAGCTTATAGAAT+TGG - chr7_4:23267223-23267242 Msa1146140:CDS 25.0%
! TTAGTAGAGCTTATAGAATT+GGG - chr7_4:23267224-23267243 Msa1146140:CDS 25.0%
! AAAAAACTAGTTCAGATAAC+CGG + chr7_4:23267333-23267352 None:intergenic 25.0%
!!! GTTATCTGAACTAGTTTTTT+CGG - chr7_4:23267333-23267352 Msa1146140:CDS 25.0%
! GGCTAAAAATGATGATAATA+AGG - chr7_4:23267354-23267373 Msa1146140:CDS 25.0%
! CATTTTATTCCAAACCAAAG+CGG - chr7_4:23262675-23262694 Msa1146140:CDS 30.0%
AAGAGTGATGAAGATGATAA+AGG - chr7_4:23262701-23262720 Msa1146140:CDS 30.0%
TGATGAAGATGATAAAGGTT+TGG - chr7_4:23262706-23262725 Msa1146140:CDS 30.0%
! ATGAGTTTGGATTTTTCTTC+TGG - chr7_4:23262875-23262894 Msa1146140:CDS 30.0%
GCATTATTAGGAACAACAAA+AGG + chr7_4:23262935-23262954 None:intergenic 30.0%
TGTTGTTCCTAATAATGCTA+AGG - chr7_4:23262937-23262956 Msa1146140:CDS 30.0%
ATCTTCATCATCATCATCAA+TGG + chr7_4:23262972-23262991 None:intergenic 30.0%
CATCTGAACATATTGAAATC+GGG + chr7_4:23263060-23263079 None:intergenic 30.0%
TCAATATGTTCAGATGAGTA+TGG - chr7_4:23263064-23263083 Msa1146140:CDS 30.0%
! AGTGATGATGAACATTCTAT+TGG - chr7_4:23263091-23263110 Msa1146140:CDS 30.0%
!!! GATGAACATTCTATTGGTTT+TGG - chr7_4:23263097-23263116 Msa1146140:CDS 30.0%
! AGAAGATGATGATGTTAAAG+AGG - chr7_4:23263141-23263160 Msa1146140:CDS 30.0%
! GAAGATGATGATGTTAAAGA+GGG - chr7_4:23263142-23263161 Msa1146140:CDS 30.0%
TGTTAAAGAGGGAGTAAAAA+AGG - chr7_4:23263153-23263172 Msa1146140:CDS 30.0%
! AACTTTGTTGATGAAAAGTG+TGG - chr7_4:23263226-23263245 Msa1146140:CDS 30.0%
TAGAAAAGATTTCAATGTGG+TGG - chr7_4:23263558-23263577 Msa1146140:CDS 30.0%
! GGTTCTTCTTTTAAACTGAA+TGG - chr7_4:23263691-23263710 Msa1146140:CDS 30.0%
CAAGGAAAAGATCAATATGT+TGG - chr7_4:23263829-23263848 Msa1146140:CDS 30.0%
!! TATGTTGGTTTAGATATTGG+AGG - chr7_4:23263844-23263863 Msa1146140:CDS 30.0%
CAATTTCAATGAGCTTAAAG+AGG + chr7_4:23263999-23264018 None:intergenic 30.0%
! TAATTTGTGAACTATAGGAC+TGG - chr7_4:23264037-23264056 Msa1146140:CDS 30.0%
TTTGACCTTGGATTTGAATT+TGG + chr7_4:23264173-23264192 None:intergenic 30.0%
ATTGACACTGTTATTAGGTT+TGG + chr7_4:23264203-23264222 None:intergenic 30.0%
TATGTCAAAGGTTTAGATGA+TGG - chr7_4:23264253-23264272 Msa1146140:CDS 30.0%
AGTTTCATTGCTTCAAATGA+AGG - chr7_4:23264279-23264298 Msa1146140:CDS 30.0%
GGAATCAGATAAAGAGAAAA+TGG - chr7_4:23264300-23264319 Msa1146140:CDS 30.0%
ATCAGATAAAGAGAAAATGG+TGG - chr7_4:23264303-23264322 Msa1146140:CDS 30.0%
ATTCCTTCTTCTTCACAATA+GGG + chr7_4:23264366-23264385 None:intergenic 30.0%
CACAATTGAATCATCCTTAA+CGG + chr7_4:23264497-23264516 None:intergenic 30.0%
TAAGGATGATTCAATTGTGT+TGG - chr7_4:23264498-23264517 Msa1146140:CDS 30.0%
! ATTTTTCTCGATGATGAGAT+TGG - chr7_4:23264981-23265000 Msa1146140:intron 30.0%
! GGTGAATTTTGCAAATTATG+TGG - chr7_4:23265002-23265021 Msa1146140:intron 30.0%
CAAATATATCTCAGAACTAG+TGG - chr7_4:23265043-23265062 Msa1146140:intron 30.0%
GTCGATCATGTAAAATAACT+TGG - chr7_4:23265081-23265100 Msa1146140:CDS 30.0%
!!! ATACCGCTATTTTTTAGGAA+AGG - chr7_4:23265222-23265241 Msa1146140:intron 30.0%
CTCTAAATAGAAGTGATTGA+CGG - chr7_4:23265410-23265429 Msa1146140:intron 30.0%
TCAGAACAAACATACAACAT+AGG + chr7_4:23265520-23265539 None:intergenic 30.0%
!!! CTTTTTTTTGTACATGACAC+AGG - chr7_4:23265584-23265603 Msa1146140:CDS 30.0%
ACTAATTTCTCTCGTAATGA+AGG - chr7_4:23265717-23265736 Msa1146140:CDS 30.0%
TTTCTTTCACATCAGGAATT+AGG + chr7_4:23265755-23265774 None:intergenic 30.0%
TTATATCCTCATCAACAAGA+AGG - chr7_4:23265777-23265796 Msa1146140:CDS 30.0%
!! AAGAAGGCTTTGAATTCATT+TGG - chr7_4:23265793-23265812 Msa1146140:CDS 30.0%
!! TTTCTTTAACTTGCGAAGAT+TGG + chr7_4:23265838-23265857 None:intergenic 30.0%
GGAAGAAGAGTTCAAAAAAT+GGG - chr7_4:23266010-23266029 Msa1146140:intron 30.0%
CGATTGTTCAAATTGTGAAA+TGG + chr7_4:23266041-23266060 None:intergenic 30.0%
AGCATAGTATAGATACAATG+CGG - chr7_4:23266120-23266139 Msa1146140:intron 30.0%
!! TACAAAGAAAAGAGCATTCT+TGG - chr7_4:23266164-23266183 Msa1146140:CDS 30.0%
! TGAAAAAGTTTTGCCAAAAG+CGG - chr7_4:23266519-23266538 Msa1146140:CDS 30.0%
CAAGCAGTTAAAATTGCTTA+TGG - chr7_4:23266598-23266617 Msa1146140:CDS 30.0%
CTTTCACAAGAAAATTCTTG+AGG - chr7_4:23266709-23266728 Msa1146140:CDS 30.0%
TTCACAAGAAAATTCTTGAG+GGG - chr7_4:23266711-23266730 Msa1146140:CDS 30.0%
TCTTTGATATTAAGGAGACA+AGG - chr7_4:23266759-23266778 Msa1146140:CDS 30.0%
CTTTGATATTAAGGAGACAA+GGG - chr7_4:23266760-23266779 Msa1146140:CDS 30.0%
TAATTAAGTGTAAAGGACTG+AGG + chr7_4:23266970-23266989 None:intergenic 30.0%
!! ATCATTGAAGGTATCGATTA+AGG + chr7_4:23267077-23267096 None:intergenic 30.0%
! ATGACTGTTTTCATCATTGA+AGG + chr7_4:23267089-23267108 None:intergenic 30.0%
! AACAAGTTTTTATCGTTGCA+AGG + chr7_4:23267123-23267142 None:intergenic 30.0%
AAATTCTTGATCGGATGATT+CGG - chr7_4:23267413-23267432 Msa1146140:CDS 30.0%
TTGTTTGGTTGTCTTTCTGA+CGG - chr7_4:23262818-23262837 Msa1146140:CDS 35.0%
TGTTGAGAAAAGATGTCGTT+TGG - chr7_4:23263024-23263043 Msa1146140:CDS 35.0%
AAGGATGAAAGTAAAGGTAG+TGG - chr7_4:23263172-23263191 Msa1146140:CDS 35.0%
! GATGATGATGATGTTAACGA+AGG - chr7_4:23263349-23263368 Msa1146140:CDS 35.0%
! GAAGTTGATTAGAGAGGTTA+TGG - chr7_4:23263582-23263601 Msa1146140:CDS 35.0%
!! TTCAACAAGTACTGATGAGT+TGG - chr7_4:23263621-23263640 Msa1146140:CDS 35.0%
! TAAACTGAATGGAGTATCAG+AGG - chr7_4:23263702-23263721 Msa1146140:CDS 35.0%
AGAATCACCAACATTGTCTT+CGG + chr7_4:23263806-23263825 None:intergenic 35.0%
!! AATGTTGGTGATTCTGAACA+AGG - chr7_4:23263811-23263830 Msa1146140:CDS 35.0%
AGATATTGGAGGAGTTTCTT+CGG - chr7_4:23263855-23263874 Msa1146140:CDS 35.0%
AACAAAGCAAGAACAGAAGA+AGG - chr7_4:23263882-23263901 Msa1146140:CDS 35.0%
AACAGAAGAAGGAATCAGAT+AGG - chr7_4:23263893-23263912 Msa1146140:CDS 35.0%
TTTCAATGAGCTTAAAGAGG+AGG + chr7_4:23263996-23264015 None:intergenic 35.0%
TGTTGCCAAATTCAAATCCA+AGG - chr7_4:23264165-23264184 Msa1146140:CDS 35.0%
GCAACATTGACACTGTTATT+AGG + chr7_4:23264208-23264227 None:intergenic 35.0%
! AATGTTGCTGACTGTGATAA+TGG - chr7_4:23264220-23264239 Msa1146140:CDS 35.0%
AACAAAGGAAGGGACTATAA+AGG - chr7_4:23264328-23264347 Msa1146140:CDS 35.0%
TATCCCTATTGTGAAGAAGA+AGG - chr7_4:23264360-23264379 Msa1146140:CDS 35.0%
GATTCCTTCTTCTTCACAAT+AGG + chr7_4:23264367-23264386 None:intergenic 35.0%
TTGGGTTTACTTGAACTTCT+TGG - chr7_4:23264445-23264464 Msa1146140:CDS 35.0%
TTCAATTGTGTTGGAGATGA+AGG - chr7_4:23264507-23264526 Msa1146140:CDS 35.0%
ACGAATATGGAGCCTTAAAA+AGG - chr7_4:23264591-23264610 Msa1146140:intron 35.0%
AATATGGAGCCTTAAAAAGG+TGG - chr7_4:23264594-23264613 Msa1146140:intron 35.0%
!!! GCACTTTTTCCACCTTTTTA+AGG + chr7_4:23264606-23264625 None:intergenic 35.0%
!! GGAAAAAGTGCTAAAAACCA+AGG - chr7_4:23264615-23264634 Msa1146140:intron 35.0%
!! AAAAGTGCTAAAAACCAAGG+AGG - chr7_4:23264618-23264637 Msa1146140:intron 35.0%
GTATCCAATTCATCCCATAA+CGG + chr7_4:23264658-23264677 None:intergenic 35.0%
TACAGCATCTTCTTCTCTAA+GGG + chr7_4:23264683-23264702 None:intergenic 35.0%
ATACAGCATCTTCTTCTCTA+AGG + chr7_4:23264684-23264703 None:intergenic 35.0%
CTTAAAGAGGATGATTACCT+TGG + chr7_4:23264707-23264726 None:intergenic 35.0%
! GTGTGTTACTATCTACAGAT+TGG - chr7_4:23264903-23264922 Msa1146140:intron 35.0%
TTGTGTTCACAACAAGATGA+TGG + chr7_4:23264960-23264979 None:intergenic 35.0%
! ATTTTGCAAATTATGTGGCG+TGG - chr7_4:23265007-23265026 Msa1146140:intron 35.0%
TTGTTTAATTGCTGCTACAG+CGG - chr7_4:23265186-23265205 Msa1146140:CDS 35.0%
CCTCCTTTCCTAAAAAATAG+CGG + chr7_4:23265228-23265247 None:intergenic 35.0%
ATCAAACAAAGCTCTTCTTC+CGG + chr7_4:23265634-23265653 None:intergenic 35.0%
! TCTCAGTTCAATGTTTCTGA+TGG - chr7_4:23265684-23265703 Msa1146140:CDS 35.0%
TTCATTTGGAAAAACTTGGC+AGG - chr7_4:23265807-23265826 Msa1146140:CDS 35.0%
GGGAAGAAGAGTTCAAAAAA+TGG - chr7_4:23266009-23266028 Msa1146140:intron 35.0%
TTGAACAATCGTGAGTTATC+TGG - chr7_4:23266050-23266069 Msa1146140:intron 35.0%
TAGTATAGATACAATGCGGA+TGG - chr7_4:23266124-23266143 Msa1146140:intron 35.0%
AATGTTCTACGTCAAATTCC+TGG - chr7_4:23266308-23266327 Msa1146140:CDS 35.0%
ACGCCAAGAAACAAAAAAAG+TGG - chr7_4:23266356-23266375 Msa1146140:CDS 35.0%
!! TGGTATTTGGCAAGTTTTGT+CGG - chr7_4:23266376-23266395 Msa1146140:CDS 35.0%
ATAGTTCCATGAAGTTGTTC+TGG + chr7_4:23266445-23266464 None:intergenic 35.0%
GACATTGTGTTAGGAAAAGA+AGG + chr7_4:23266491-23266510 None:intergenic 35.0%
! GAAAAAGTTTTGCCAAAAGC+GGG - chr7_4:23266520-23266539 Msa1146140:CDS 35.0%
CCTTTGTGAACATGAACAAA+GGG + chr7_4:23266626-23266645 None:intergenic 35.0%
! ATTTTCTTGTGAAAGCTGTC+CGG + chr7_4:23266704-23266723 None:intergenic 35.0%
!! TCAATCTAAGCTTTTCTAGC+CGG + chr7_4:23266856-23266875 None:intergenic 35.0%
AAGGAAATCCTCTTCATTTC+TGG - chr7_4:23267031-23267050 Msa1146140:CDS 35.0%
TTATCTCTCCAGAAATGAAG+AGG + chr7_4:23267042-23267061 None:intergenic 35.0%
! CTTCATTTCTGGAGAGATAA+AGG - chr7_4:23267042-23267061 Msa1146140:CDS 35.0%
! AACGATAAAAACTTGTTCCG+AGG - chr7_4:23267126-23267145 Msa1146140:CDS 35.0%
! ACGATAAAAACTTGTTCCGA+GGG - chr7_4:23267127-23267146 Msa1146140:CDS 35.0%
!! ATAGCCTGTTTTTCAACAGA+GGG + chr7_4:23267205-23267224 None:intergenic 35.0%
!! AATAGCCTGTTTTTCAACAG+AGG + chr7_4:23267206-23267225 None:intergenic 35.0%
ATGATAATAAGGAGGAGTTG+AGG - chr7_4:23267365-23267384 Msa1146140:CDS 35.0%
! AGACATGTTTGTTGAGTGTT+TGG - chr7_4:23267450-23267469 Msa1146140:CDS 35.0%
AGCAAGAATGTTCCACTGTT+TGG - chr7_4:23262632-23262651 Msa1146140:CDS 40.0%
AAAGGTTTGGACTCTGTTTC+TGG - chr7_4:23262719-23262738 Msa1146140:CDS 40.0%
!! AGTAAGAGTGTTCCGTTGTT+TGG - chr7_4:23262761-23262780 Msa1146140:CDS 40.0%
CTGCTAGAAACACCAAACAA+CGG + chr7_4:23262776-23262795 None:intergenic 40.0%
TTTCTGACGGTTCATCGAAA+CGG - chr7_4:23262831-23262850 Msa1146140:CDS 40.0%
! GATGAAAGTAAAGGTAGTGG+AGG - chr7_4:23263175-23263194 Msa1146140:CDS 40.0%
!! AGTAAAGGTAGTGGAGGAAA+TGG - chr7_4:23263181-23263200 Msa1146140:CDS 40.0%
! TGTTGATGAAAAGTGTGGCT+TGG - chr7_4:23263231-23263250 Msa1146140:CDS 40.0%
GAAGAAGAAGAACACTCTGT+TGG - chr7_4:23263304-23263323 Msa1146140:CDS 40.0%
GGAGTAAAAAGCGATGAAAG+TGG - chr7_4:23263370-23263389 Msa1146140:CDS 40.0%
GTAAAAAGCGATGAAAGTGG+AGG - chr7_4:23263373-23263392 Msa1146140:CDS 40.0%
!! AGATTTTGACGAGAGTGATG+AGG - chr7_4:23263417-23263436 Msa1146140:CDS 40.0%
! CTCTCCTTATGTTGATGAGA+AGG - chr7_4:23263516-23263535 Msa1146140:CDS 40.0%
! TCCTTATGTTGATGAGAAGG+AGG - chr7_4:23263519-23263538 Msa1146140:CDS 40.0%
TCCTCCTTCTCATCAACATA+AGG + chr7_4:23263523-23263542 None:intergenic 40.0%
TGAGAAGGAGGAGAAGAAAA+AGG - chr7_4:23263531-23263550 Msa1146140:CDS 40.0%
GAGAAGGAGGAGAAGAAAAA+GGG - chr7_4:23263532-23263551 Msa1146140:CDS 40.0%
GAGGTTATGGATAGACAATG+TGG - chr7_4:23263595-23263614 Msa1146140:CDS 40.0%
TCTAGTACCTACGTGAAGAA+GGG - chr7_4:23263670-23263689 Msa1146140:CDS 40.0%
ACCAACATTGTCTTCGGATT+TGG + chr7_4:23263800-23263819 None:intergenic 40.0%
AAGAAGGAATCAGATAGGCA+GGG - chr7_4:23263898-23263917 Msa1146140:CDS 40.0%
TACCGCTTCTGATTCTCTAA+GGG + chr7_4:23263962-23263981 None:intergenic 40.0%
ATACCGCTTCTGATTCTCTA+AGG + chr7_4:23263963-23263982 None:intergenic 40.0%
AGAATCAGAAGCGGTATCTA+AGG - chr7_4:23263966-23263985 Msa1146140:CDS 40.0%
ATGCCAGAATGAAATGTCAG+AGG - chr7_4:23264120-23264139 Msa1146140:CDS 40.0%
TGCCAGAATGAAATGTCAGA+GGG - chr7_4:23264121-23264140 Msa1146140:CDS 40.0%
TTTGGCATTGTCTTTGACCT+TGG + chr7_4:23264185-23264204 None:intergenic 40.0%
! GTCAAAGGTTTAGATGATGG+AGG - chr7_4:23264256-23264275 Msa1146140:CDS 40.0%
! GAGAAAATGGTGGAGAACAA+AGG - chr7_4:23264313-23264332 Msa1146140:CDS 40.0%
! AAATGGTGGAGAACAAAGGA+AGG - chr7_4:23264317-23264336 Msa1146140:CDS 40.0%
! AATGGTGGAGAACAAAGGAA+GGG - chr7_4:23264318-23264337 Msa1146140:CDS 40.0%
!! AAGCACACTTTTTATGCCGA+AGG - chr7_4:23264420-23264439 Msa1146140:CDS 40.0%
! ACTTTTTATGCCGAAGGAGT+TGG - chr7_4:23264426-23264445 Msa1146140:CDS 40.0%
! CTTTTTATGCCGAAGGAGTT+GGG - chr7_4:23264427-23264446 Msa1146140:CDS 40.0%
TCAAGTAAACCCAACTCCTT+CGG + chr7_4:23264439-23264458 None:intergenic 40.0%
AACTTCTTGGTAAATGCCTC+TGG - chr7_4:23264458-23264477 Msa1146140:CDS 40.0%
ACTTCTTGGTAAATGCCTCT+GGG - chr7_4:23264459-23264478 Msa1146140:CDS 40.0%
! TGAGGTGTCTTAACACAAGT+CGG + chr7_4:23264568-23264587 None:intergenic 40.0%
AGACACCTCATGAACGAATA+TGG - chr7_4:23264578-23264597 Msa1146140:intron 40.0%
AGAAGAAGATGCTGTATCCA+AGG - chr7_4:23264687-23264706 Msa1146140:intron 40.0%
TTAGAGACAGAAGAAGCTAG+TGG - chr7_4:23264930-23264949 Msa1146140:intron 40.0%
!!! CCGCTATTTTTTAGGAAAGG+AGG - chr7_4:23265225-23265244 Msa1146140:intron 40.0%
CTCTAAACCAAGCTAGTTGT+TGG - chr7_4:23265328-23265347 Msa1146140:intron 40.0%
CAACATAGGCCTTGAATAAC+AGG + chr7_4:23265506-23265525 None:intergenic 40.0%
GATGATAGATGTCCCAATGA+AGG - chr7_4:23265606-23265625 Msa1146140:CDS 40.0%
!! TCGTAATGAAGGCACTGTTT+GGG - chr7_4:23265728-23265747 Msa1146140:CDS 40.0%
TCAAAGCCTTCTTGTTGATG+AGG + chr7_4:23265786-23265805 None:intergenic 40.0%
ACAATAACCGGCAAGCATTT+CGG + chr7_4:23265963-23265982 None:intergenic 40.0%
!! TGCGAGTTTGTTGCATACTT+GGG - chr7_4:23265989-23266008 Msa1146140:intron 40.0%
! ACGTCAAATTCCTGGTTTGT+TGG - chr7_4:23266316-23266335 Msa1146140:CDS 40.0%
TCATCAAACACCAACAAACC+AGG + chr7_4:23266329-23266348 None:intergenic 40.0%
!! GGTTTGTTGGTGTTTGATGA+AGG - chr7_4:23266329-23266348 Msa1146140:CDS 40.0%
TCCTTTCCAGAACAACTTCA+TGG - chr7_4:23266436-23266455 Msa1146140:CDS 40.0%
!! TCCATGAAGTTGTTCTGGAA+AGG + chr7_4:23266440-23266459 None:intergenic 40.0%
!!! CTTTTTTATGGTCCCGCTTT+TGG + chr7_4:23266535-23266554 None:intergenic 40.0%
! TTGATCTTTTCCTCAGGAAC+TGG + chr7_4:23266581-23266600 None:intergenic 40.0%
! AACTGCTTGATCTTTTCCTC+AGG + chr7_4:23266587-23266606 None:intergenic 40.0%
CCCTTTGTTCATGTTCACAA+AGG - chr7_4:23266623-23266642 Msa1146140:CDS 40.0%
GCCTTTGTGAACATGAACAA+AGG + chr7_4:23266627-23266646 None:intergenic 40.0%
! ATCCTTCTAAAGATGCTTCC+CGG - chr7_4:23266650-23266669 Msa1146140:CDS 40.0%
! AGCACACATTTTCTTAACCC+GGG + chr7_4:23266671-23266690 None:intergenic 40.0%
! CAGCACACATTTTCTTAACC+CGG + chr7_4:23266672-23266691 None:intergenic 40.0%
!!! TTTGTTTTGACACCTGCGTA+GGG + chr7_4:23266881-23266900 None:intergenic 40.0%
AGTGTAAAGGACTGAGGAAT+TGG + chr7_4:23266964-23266983 None:intergenic 40.0%
! TTTAGAATGGACGATGGAGA+AGG - chr7_4:23267012-23267031 Msa1146140:CDS 40.0%
! TTTCTGGAGAGATAAAGGAC+AGG - chr7_4:23267047-23267066 Msa1146140:CDS 40.0%
TTGTACTACTCGATGTCGTA+TGG - chr7_4:23267176-23267195 Msa1146140:CDS 40.0%
GAATCCCTCTGTTGAAAAAC+AGG - chr7_4:23267198-23267217 Msa1146140:CDS 40.0%
ACATACCATCTACTCACTGA+AGG - chr7_4:23267265-23267284 Msa1146140:CDS 40.0%
CATACCATCTACTCACTGAA+GGG - chr7_4:23267266-23267285 Msa1146140:CDS 40.0%
! TTCAGATAACCGGTCCTTTT+TGG + chr7_4:23267323-23267342 None:intergenic 40.0%
! GAGCGAGAATTTGAGAGTTT+TGG - chr7_4:23267484-23267503 Msa1146140:CDS 40.0%
GGAGAAATGCTACCAAACAG+TGG + chr7_4:23262647-23262666 None:intergenic 45.0%
! GGTGGAGAAGTTGATTAGAG+AGG - chr7_4:23263576-23263595 Msa1146140:CDS 45.0%
CTTCTTCACGTAGGTACTAG+AGG + chr7_4:23263671-23263690 None:intergenic 45.0%
CTCTAGTACCTACGTGAAGA+AGG - chr7_4:23263669-23263688 Msa1146140:CDS 45.0%
AGAAGAACCCTTCTTCACGT+AGG + chr7_4:23263680-23263699 None:intergenic 45.0%
!! GAAAGCGAAGAGTGTTGATG+TGG - chr7_4:23263729-23263748 Msa1146140:CDS 45.0%
GCCAAATCCGAAGACAATGT+TGG - chr7_4:23263796-23263815 Msa1146140:CDS 45.0%
GAAGAAGGAATCAGATAGGC+AGG - chr7_4:23263897-23263916 Msa1146140:CDS 45.0%
AGAAGGAATCAGATAGGCAG+GGG - chr7_4:23263899-23263918 Msa1146140:CDS 45.0%
!! GGAAGAGAAGGAAGTGCTAT+GGG - chr7_4:23263921-23263940 Msa1146140:CDS 45.0%
!! GGAAGTGCTATGGGATGAAT+TGG - chr7_4:23263930-23263949 Msa1146140:CDS 45.0%
AGCCCTTAGAGAATCAGAAG+CGG - chr7_4:23263957-23263976 Msa1146140:CDS 45.0%
GCCAGAATGAAATGTCAGAG+GGG - chr7_4:23264122-23264141 Msa1146140:CDS 45.0%
TCCCCTCTGACATTTCATTC+TGG + chr7_4:23264126-23264145 None:intergenic 45.0%
GGACGACAAGAATACCGTTA+AGG - chr7_4:23264480-23264499 Msa1146140:CDS 45.0%
GTGTTGGAGATGAAGGATGT+TGG - chr7_4:23264514-23264533 Msa1146140:intron 45.0%
AGGCTCCATATTCGTTCATG+AGG + chr7_4:23264586-23264605 None:intergenic 45.0%
AGTGCTAAAAACCAAGGAGG+AGG - chr7_4:23264621-23264640 Msa1146140:intron 45.0%
GGAACCGTTATGGGATGAAT+TGG - chr7_4:23264651-23264670 Msa1146140:intron 45.0%
CTCAGAACTAGTGGTAAGCA+AGG - chr7_4:23265052-23265071 Msa1146140:intron 45.0%
! TAAGGTGCCAACAACTAGCT+TGG + chr7_4:23265338-23265357 None:intergenic 45.0%
AGCTAGTTGTTGGCACCTTA+TGG - chr7_4:23265338-23265357 Msa1146140:intron 45.0%
AGATGTCCCAATGAAGGTTC+CGG - chr7_4:23265612-23265631 Msa1146140:CDS 45.0%
CTTCTTCCGGAACCTTCATT+GGG + chr7_4:23265621-23265640 None:intergenic 45.0%
TCTTCTTCCGGAACCTTCAT+TGG + chr7_4:23265622-23265641 None:intergenic 45.0%
GACAATTCCTCCCTCTTTGT+TGG - chr7_4:23265660-23265679 Msa1146140:CDS 45.0%
GAACTGAGAGCCAACAAAGA+GGG + chr7_4:23265673-23265692 None:intergenic 45.0%
TGAACTGAGAGCCAACAAAG+AGG + chr7_4:23265674-23265693 None:intergenic 45.0%
!! CTCGTAATGAAGGCACTGTT+TGG - chr7_4:23265727-23265746 Msa1146140:CDS 45.0%
AAAGAAAGCCGTTCCTTGCA+AGG - chr7_4:23265851-23265870 Msa1146140:CDS 45.0%
GCTGGCTGTAGTATTTCTCA+TGG - chr7_4:23265920-23265939 Msa1146140:CDS 45.0%
CAATAACCGGCAAGCATTTC+GGG + chr7_4:23265962-23265981 None:intergenic 45.0%
CAAGTATGCAACAAACTCGC+AGG + chr7_4:23265990-23266009 None:intergenic 45.0%
!! CTGCGAGTTTGTTGCATACT+TGG - chr7_4:23265988-23266007 Msa1146140:intron 45.0%
! GGATGGTGAAACTGATTTCG+TGG - chr7_4:23266141-23266160 Msa1146140:intron 45.0%
AGTTTGTACGAGAAGCTAGC+CGG - chr7_4:23266197-23266216 Msa1146140:CDS 45.0%
CGAAAGCGAATCATCCTTTC+TGG - chr7_4:23266410-23266429 Msa1146140:CDS 45.0%
TCTGGAAAGGAGTTCCAGAA+AGG + chr7_4:23266427-23266446 None:intergenic 45.0%
AGCTCGTGTGACATTGTGTT+AGG + chr7_4:23266500-23266519 None:intergenic 45.0%
TATTTGGGAACCAGTTCCTG+AGG - chr7_4:23266568-23266587 Msa1146140:CDS 45.0%
! TCCTTCTAAAGATGCTTCCC+GGG - chr7_4:23266651-23266670 Msa1146140:CDS 45.0%
CAGACTCCTCTTCTTCCAAA+AGG + chr7_4:23266820-23266839 None:intergenic 45.0%
AGAGGAGTCTGTTCTTGACA+AGG - chr7_4:23266829-23266848 Msa1146140:CDS 45.0%
AGTCTGTTCTTGACAAGGAC+CGG - chr7_4:23266834-23266853 Msa1146140:CDS 45.0%
!!! TTGTTTTGACACCTGCGTAG+GGG + chr7_4:23266880-23266899 None:intergenic 45.0%
!!! CTTTGTTTTGACACCTGCGT+AGG + chr7_4:23266882-23266901 None:intergenic 45.0%
!! CTCGTCTTTAGAATGGACGA+TGG - chr7_4:23267006-23267025 Msa1146140:CDS 45.0%
TAGTCCCTTCAGTGAGTAGA+TGG + chr7_4:23267273-23267292 None:intergenic 45.0%
GTGCGATAAATTTCGCCAAC+AGG - chr7_4:23267297-23267316 Msa1146140:CDS 45.0%
ATTTCGCCAACAGGCCAAAA+AGG - chr7_4:23267306-23267325 Msa1146140:CDS 45.0%
TGAGTGTTTGGTACAACCGA+AGG - chr7_4:23267462-23267481 Msa1146140:CDS 45.0%
CTCTCAAATTCTCGCTCCTT+CGG + chr7_4:23267481-23267500 None:intergenic 45.0%
! ACTCTTTCGCCGCTTTGGTT+TGG + chr7_4:23262687-23262706 None:intergenic 50.0%
TCATCACTCTTTCGCCGCTT+TGG + chr7_4:23262692-23262711 None:intergenic 50.0%
! TGAATGGAGTATCAGAGGCG+CGG - chr7_4:23263707-23263726 Msa1146140:CDS 50.0%
GAAGGAATCAGATAGGCAGG+GGG - chr7_4:23263900-23263919 Msa1146140:CDS 50.0%
!! GGGAAGAGAAGGAAGTGCTA+TGG - chr7_4:23263920-23263939 Msa1146140:CDS 50.0%
GGTGTCTTAACACAAGTCGG+TGG + chr7_4:23264565-23264584 None:intergenic 50.0%
AGGAAGAGCAGGAACCGTTA+TGG - chr7_4:23264641-23264660 Msa1146140:intron 50.0%
GGAAGAGCAGGAACCGTTAT+GGG - chr7_4:23264642-23264661 Msa1146140:intron 50.0%
AAAGCCGTTCCTTGCAAGGA+GGG - chr7_4:23265855-23265874 Msa1146140:CDS 50.0%
TGCATTATCTCCCATGCTCC+TGG - chr7_4:23265882-23265901 Msa1146140:CDS 50.0%
AGTGTTCCCGAAATGCTTGC+CGG - chr7_4:23265953-23265972 Msa1146140:CDS 50.0%
CTCGCAGGAGCAACAATAAC+CGG + chr7_4:23265975-23265994 None:intergenic 50.0%
GGGAATCTGACGATGAGAGA+GGG - chr7_4:23266228-23266247 Msa1146140:CDS 50.0%
GGAATCTGACGATGAGAGAG+GGG - chr7_4:23266229-23266248 Msa1146140:CDS 50.0%
!! ACCCGGGAAGCATCTTTAGA+AGG + chr7_4:23266655-23266674 None:intergenic 50.0%
ATGTGTGCTGCGTTTGATGC+CGG - chr7_4:23266682-23266701 Msa1146140:CDS 50.0%
!! ACGCGACCTTTTGGAAGAAG+AGG - chr7_4:23266811-23266830 Msa1146140:CDS 50.0%
CTTAGATTGAACCCCTACGC+AGG - chr7_4:23266866-23266885 Msa1146140:CDS 50.0%
TTGTTCCGAGGGAATCAGCT+TGG - chr7_4:23267138-23267157 Msa1146140:CDS 50.0%
! TCCAACCAAGCTGATTCCCT+CGG + chr7_4:23267146-23267165 None:intergenic 50.0%
TCAGCTTGGTTGGAGCTTCA+AGG - chr7_4:23267152-23267171 Msa1146140:CDS 50.0%
CAGCTTGGTTGGAGCTTCAA+GGG - chr7_4:23267153-23267172 Msa1146140:CDS 50.0%
AGATAGGCAGGGGGAAGAGA+AGG - chr7_4:23263909-23263928 Msa1146140:CDS 55.0%
CGGTATTCTTGTCGTCCCAG+AGG + chr7_4:23264477-23264496 None:intergenic 55.0%
AACCAAGGAGGAGGAAGAGC+AGG - chr7_4:23264630-23264649 Msa1146140:intron 55.0%
TTCCTGCTCTTCCTCCTCCT+TGG + chr7_4:23264635-23264654 None:intergenic 55.0%
CTGAGAGCCAACAAAGAGGG+AGG + chr7_4:23265670-23265689 None:intergenic 55.0%
GAAAGCCGTTCCTTGCAAGG+AGG - chr7_4:23265854-23265873 Msa1146140:CDS 55.0%
ATCTCCCATGCTCCTGGAAC+CGG - chr7_4:23265888-23265907 Msa1146140:CDS 55.0%
! TACAGCCAGCCTTGTCTTCC+CGG + chr7_4:23265910-23265929 None:intergenic 55.0%
TTGTACGAGAAGCTAGCCGG+AGG - chr7_4:23266200-23266219 Msa1146140:CDS 55.0%
GGGGAATCTGACGATGAGAG+AGG - chr7_4:23266227-23266246 Msa1146140:CDS 55.0%
GTTCGAGCAGAAGAGACGGA+TGG + chr7_4:23266793-23266812 None:intergenic 55.0%
TCGCGTTCGAGCAGAAGAGA+CGG + chr7_4:23266797-23266816 None:intergenic 55.0%
! TCTGCTCGAACGCGACCTTT+TGG - chr7_4:23266802-23266821 Msa1146140:CDS 55.0%
TCCGAGGGAATCAGCTTGGT+TGG - chr7_4:23267142-23267161 Msa1146140:CDS 55.0%
GCCAACAGGCCAAAAAGGAC+CGG - chr7_4:23267311-23267330 Msa1146140:CDS 55.0%
!! ACCGGTCCTTTTTGGCCTGT+TGG + chr7_4:23267315-23267334 None:intergenic 55.0%
GCCACCCTCCTTGCAAGGAA+CGG + chr7_4:23265862-23265881 None:intergenic 60.0%
ATGCAGCCACCCTCCTTGCA+AGG + chr7_4:23265867-23265886 None:intergenic 60.0%
TCTCCCATGCTCCTGGAACC+GGG - chr7_4:23265889-23265908 Msa1146140:CDS 60.0%
! CTTCCCGGTTCCAGGAGCAT+GGG + chr7_4:23265895-23265914 None:intergenic 60.0%
TCTTCCCGGTTCCAGGAGCA+TGG + chr7_4:23265896-23265915 None:intergenic 60.0%
CTCCTGGAACCGGGAAGACA+AGG - chr7_4:23265898-23265917 Msa1146140:CDS 60.0%
! AGCCTTGTCTTCCCGGTTCC+AGG + chr7_4:23265903-23265922 None:intergenic 60.0%
TGGAACCGGGAAGACAAGGC+TGG - chr7_4:23265902-23265921 Msa1146140:CDS 60.0%
TACGAGAAGCTAGCCGGAGG+AGG - chr7_4:23266203-23266222 Msa1146140:CDS 60.0%
AGAAGCTAGCCGGAGGAGGA+GGG - chr7_4:23266207-23266226 Msa1146140:CDS 60.0%
GTCAGATTCCCCTCCTCCTC+CGG + chr7_4:23266219-23266238 None:intergenic 60.0%
GCCGTTCCTTGCAAGGAGGG+TGG - chr7_4:23265858-23265877 Msa1146140:CDS 65.0%
GAGAAGCTAGCCGGAGGAGG+AGG - chr7_4:23266206-23266225 Msa1146140:CDS 65.0%
GAAGCTAGCCGGAGGAGGAG+GGG - chr7_4:23266208-23266227 Msa1146140:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 23262605 23267528 23262605 ID=Msa1146140;Name=Msa1146140
chr7_4 mRNA 23262605 23267528 23262605 ID=Msa1146140-mRNA-1;Parent=Msa1146140;Name=Msa1146140-mRNA-1;_AED=0.02;_eAED=0.03;_QI=0|0|0|1|1|1|4|0|1343
chr7_4 exon 23266146 23267528 23266146 ID=Msa1146140-mRNA-1:exon:5861;Parent=Msa1146140-mRNA-1
chr7_4 exon 23265425 23266006 23265425 ID=Msa1146140-mRNA-1:exon:5860;Parent=Msa1146140-mRNA-1
chr7_4 exon 23265069 23265212 23265069 ID=Msa1146140-mRNA-1:exon:5859;Parent=Msa1146140-mRNA-1
chr7_4 exon 23262605 23264527 23262605 ID=Msa1146140-mRNA-1:exon:5858;Parent=Msa1146140-mRNA-1
chr7_4 CDS 23266146 23267528 23266146 ID=Msa1146140-mRNA-1:cds;Parent=Msa1146140-mRNA-1
chr7_4 CDS 23265425 23266006 23265425 ID=Msa1146140-mRNA-1:cds;Parent=Msa1146140-mRNA-1
chr7_4 CDS 23265069 23265212 23265069 ID=Msa1146140-mRNA-1:cds;Parent=Msa1146140-mRNA-1
chr7_4 CDS 23262605 23264527 23262605 ID=Msa1146140-mRNA-1:cds;Parent=Msa1146140-mRNA-1
Gene Sequence

>Msa1146140

ATGGCTGGTGTTTCTAACAGAACTCGTAGCAAGAATGTTCCACTGTTTGGTAGCATTTCTCCTGATGTATCATTTTATTCCAAACCAAAGCGGCGAAAGAGTGATGAAGATGATAAAGGTTTGGACTCTGTTTCTGGTTTGTCTAGCAAAACTTGTAGTAAGAGTGTTCCGTTGTTTGGTGTTTCTAGCAGAACTCGTAGCAAAAATGTGTTATTGTTTGGTTGTCTTTCTGACGGTTCATCGAAACGGAGAAAGAGTGTTGAAAATGATATGAGTTTGGATTTTTCTTCTGGTTCTAAGAAAATAAAGGTAAAAGAAGAAGAAGAACCTTTTGTTGTTCCTAATAATGCTAAGGTTATCATTTCCATTGATGATGATGATGAAGATGTGAAGATGTTTGATGCTAAAGATGAAAACTTTGTTGAGAAAAGATGTCGTTTGGAAGAAGATAACCCGATTTCAATATGTTCAGATGAGTATGGTGAGAGTGATGATGAACATTCTATTGGTTTTGGTGCTGATAACGAAGAAGAAAAAGAAGATGATGATGTTAAAGAGGGAGTAAAAAAGGATGAAAGTAAAGGTAGTGGAGGAAATGGTGATATTCATGTCAAAGATGAAAACTTTGTTGATGAAAAGTGTGGCTTGGCACATGAAAACGTGATTATAATAGATAAAGATGAAAATGGTGAAAGTGATGAAGAAGAAGAACACTCTGTTGGTTCTGATTCTGATAATGCTGACGATGATGATGATGTTAACGAAGGAGTAAAAAGCGATGAAAGTGGAGGAATTGACGAGTTTGTTGATGAAGATTTTGACGAGAGTGATGAGGATGATGATTCTAGTGATGATTTTAAAGTTGAGGAGCTGAATGAGATTTCTGACAATGATGATGACAGTTCTTCTGACTCTCCTTATGTTGATGAGAAGGAGGAGAAGAAAAAGGGTTATAGAAAAGATTTCAATGTGGTGGAGAAGTTGATTAGAGAGGTTATGGATAGACAATGTGGAATTTCAACAAGTACTGATGAGTTGGAACATGCAGAGCATGCTAGTGTTTCCTCTAGTACCTACGTGAAGAAGGGTTCTTCTTTTAAACTGAATGGAGTATCAGAGGCGCGGAAAGCGAAGAGTGTTGATGTGGAAGTGAAAAACGTCTCTCATAAAAGTGTAAATGTTGGAGTGAATGCCAAATCCGAAGACAATGTTGGTGATTCTGAACAAGGAAAAGATCAATATGTTGGTTTAGATATTGGAGGAGTTTCTTCGGTTCAAACAAAGCAAGAACAGAAGAAGGAATCAGATAGGCAGGGGGAAGAGAAGGAAGTGCTATGGGATGAATTGGATGCAGCCCTTAGAGAATCAGAAGCGGTATCTAAGAATGAAATGTCAGAGGGGAAAAAAGCAAAAAGTGTAAATGTTGCCAAATTCAAATCCAAGGTCAAAGACAATGCCAAACCTAATAACAGTGTCAATGTTGCTGACTGTGATAATGGAAAAGAAAATTATGTCAAAGGTTTAGATGATGGAGGAGTTTCATTGCTTCAAATGAAGGAATCAGATAAAGAGAAAATGGTGGAGAACAAAGGAAGGGACTATAAAGGTATAGCTAATATCCCTATTGTGAAGAAGAAGGAATCTATTGATAACAATGGTTTTAATCAAAGGGGAAAAAGCACACTTTTTATGCCGAAGGAGTTGGGTTTACTTGAACTTCTTGGTAAATGCCTCTGGGACGACAAGAATACCGTTAAGGATGATTCAATTGTGTTGGAGATGAAGGATGTTGGCGTTGATCAGCAAGATATGCAGAAACCACCGACTTGTGTTAAGACACCTCATGAACGAATATGGAGCCTTAAAAAGGTGGAAAAAGTGCTAAAAACCAAGGAGGAGGAAGAGCAGGAACCGTTATGGGATGAATTGGATACATCCCTTAGAGAAGAAGATGCTGTATCCAAGATTGGAAAGTTAGAGACAGAAGAAGCTAGTGGAAGTCCATCATCTTGTTGTGAACACAACATTTTTCTCGATGATGAGATTGGTGAATTTTGCAAATTATGTGGCGTGGTTATTACTGAGATCAAATATATCTCAGAACTAGTGGATGATAGATGTCCCAATGAAGGTTCCGGAAGAAGAGCTTTGTTTGATGATTCAGACAATTCCTCCCTCTTTGTTGGCTCTCAGTTCAATGTTTCTGATGGTGAATCAGAAACTAATTTCTCTCGTAATGAAGGCACTGTTTGGGACCTAATTCCTGATGTGAAAGAAAAGTTATATCCTCATCAACAAGAAGGCTTTGAATTCATTTGGAAAAACTTGGCAGGAAATACCAATCTTCGCAAGTTAAAGAAAGCCGTTCCTTGCAAGGAGGGTGGCTGCATTATCTCCCATGCTCCTGGAACCGGGAAGACAAGGCTGGCTGTAGTATTTCTCATGGCTTATTTGAAAGTGTTCCCGAAATGCTTGCCGGTTATTGTTGCTCCTGCGAGTTTGTTGCATACTTGGGAAGAAGAGTTCAAAAAATGGGACATTCCATTTCACAATTTGAACAATCGTGAGTTATCTGGTAAAGTGCATGATGATGTTGTTAATTTGCTTAATTGGTCTAATTCACAGCATAGTATAGATACAATGCGGATGGTGAAACTGATTTCGTGGTACAAAGAAAAGAGCATTCTTGGAATCAGCTACAGTTTGTACGAGAAGCTAGCCGGAGGAGGAGGGGAATCTGACGATGAGAGAGGGGAAGATGAGAAAAAGAAAAAACAATCAAGTGTGGAGAAAAGAAAAGAAATTATGGGAAATGTTCTACGTCAAATTCCTGGTTTGTTGGTGTTTGATGAAGGACATACGCCAAGAAACAAAAAAAGTGGTATTTGGCAAGTTTTGTCGGAAGTTCAAGCACGAAAGCGAATCATCCTTTCTGGAACTCCTTTCCAGAACAACTTCATGGAACTATACAACACTTTGAGCTTAGTGAAGCCTTCTTTTCCTAACACAATGTCACACGAGCTGAAAAAGTTTTGCCAAAAGCGGGACCATAAAAAAGCATCTAAAGAATGTATTTGGGAACCAGTTCCTGAGGAAAAGATCAAGCAGTTAAAATTGCTTATGGATCCCTTTGTTCATGTTCACAAAGGCGCGATCCTTCTAAAGATGCTTCCCGGGTTAAGAAAATGTGTGCTGCGTTTGATGCCGGACAGCTTTCACAAGAAAATTCTTGAGGGGATTCAAAGTTCTCAGAATACATTGATCTTTGATATTAAGGAGACAAGGGCATCAGTCCATCCGTCTCTTCTGCTCGAACGCGACCTTTTGGAAGAAGAGGAGTCTGTTCTTGACAAGGACCGGCTAGAAAAGCTTAGATTGAACCCCTACGCAGGTGTCAAAACAAAGTTTTTGTTGGAGTTCGTTAGACTTTGTGCTGCTTTAAATGAGAAAGTTCTTGTGTTCAGCCAATTCCTCAGTCCTTTACACTTAATTATAGAGCAGTTATTAAACTCGTCTTTAGAATGGACGATGGAGAAGGAAATCCTCTTCATTTCTGGAGAGATAAAGGACAGGAAGTCCTTAATCGATACCTTCAATGATGAAAACAGTCATGCAAAGATTCTCCTTGCAACGATAAAAACTTGTTCCGAGGGAATCAGCTTGGTTGGAGCTTCAAGGGTTGTACTACTCGATGTCGTATGGAATCCCTCTGTTGAAAAACAGGCTATTAGTAGAGCTTATAGAATTGGGCAGAAGAAAGTTGTCTACACATACCATCTACTCACTGAAGGGACTAGAGAGTGCGATAAATTTCGCCAACAGGCCAAAAAGGACCGGTTATCTGAACTAGTTTTTTCGGCTAAAAATGATGATAATAAGGAGGAGTTGAGGAGCTGTGCAGCGAACATTGAAGATAAAATTCTTGATCGGATGATTCGGCATGAAAAGCTCAAAGACATGTTTGTTGAGTGTTTGGTACAACCGAAGGAGCGAGAATTTGAGAGTTTTGGTATTGATTATGATGAATGTTAA
Protein sequence

>Msa1146140

MAGVSNRTRSKNVPLFGSISPDVSFYSKPKRRKSDEDDKGLDSVSGLSSKTCSKSVPLFGVSSRTRSKNVLLFGCLSDGSSKRRKSVENDMSLDFSSGSKKIKVKEEEEPFVVPNNAKVIISIDDDDEDVKMFDAKDENFVEKRCRLEEDNPISICSDEYGESDDEHSIGFGADNEEEKEDDDVKEGVKKDESKGSGGNGDIHVKDENFVDEKCGLAHENVIIIDKDENGESDEEEEHSVGSDSDNADDDDDVNEGVKSDESGGIDEFVDEDFDESDEDDDSSDDFKVEELNEISDNDDDSSSDSPYVDEKEEKKKGYRKDFNVVEKLIREVMDRQCGISTSTDELEHAEHASVSSSTYVKKGSSFKLNGVSEARKAKSVDVEVKNVSHKSVNVGVNAKSEDNVGDSEQGKDQYVGLDIGGVSSVQTKQEQKKESDRQGEEKEVLWDELDAALRESEAVSKNEMSEGKKAKSVNVAKFKSKVKDNAKPNNSVNVADCDNGKENYVKGLDDGGVSLLQMKESDKEKMVENKGRDYKGIANIPIVKKKESIDNNGFNQRGKSTLFMPKELGLLELLGKCLWDDKNTVKDDSIVLEMKDVGVDQQDMQKPPTCVKTPHERIWSLKKVEKVLKTKEEEEQEPLWDELDTSLREEDAVSKIGKLETEEASGSPSSCCEHNIFLDDEIGEFCKLCGVVITEIKYISELVDDRCPNEGSGRRALFDDSDNSSLFVGSQFNVSDGESETNFSRNEGTVWDLIPDVKEKLYPHQQEGFEFIWKNLAGNTNLRKLKKAVPCKEGGCIISHAPGTGKTRLAVVFLMAYLKVFPKCLPVIVAPASLLHTWEEEFKKWDIPFHNLNNRELSGKVHDDVVNLLNWSNSQHSIDTMRMVKLISWYKEKSILGISYSLYEKLAGGGGESDDERGEDEKKKKQSSVEKRKEIMGNVLRQIPGLLVFDEGHTPRNKKSGIWQVLSEVQARKRIILSGTPFQNNFMELYNTLSLVKPSFPNTMSHELKKFCQKRDHKKASKECIWEPVPEEKIKQLKLLMDPFVHVHKGAILLKMLPGLRKCVLRLMPDSFHKKILEGIQSSQNTLIFDIKETRASVHPSLLLERDLLEEEESVLDKDRLEKLRLNPYAGVKTKFLLEFVRLCAALNEKVLVFSQFLSPLHLIIEQLLNSSLEWTMEKEILFISGEIKDRKSLIDTFNDENSHAKILLATIKTCSEGISLVGASRVVLLDVVWNPSVEKQAISRAYRIGQKKVVYTYHLLTEGTRECDKFRQQAKKDRLSELVFSAKNDDNKEELRSCAANIEDKILDRMIRHEKLKDMFVECLVQPKEREFESFGIDYDEC*