Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146460 | AES78883.1 | 91.419 | 303 | 26 | 0 | 1 | 303 | 1 | 303 | 0.0 | 553 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146460 | sp|Q8L3W1|VRN1_ARATH | 26.627 | 338 | 181 | 6 | 13 | 290 | 6 | 336 | 1.43e-30 | 120 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146460 | G7KVV6 | 91.419 | 303 | 26 | 0 | 1 | 303 | 1 | 303 | 0.0 | 553 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1146460 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146460 | MtrunA17_Chr7g0233531 | 91.786 | 280 | 23 | 0 | 28 | 307 | 1 | 280 | 0.0 | 510 |
| Msa1146460 | MtrunA17_Chr7g0233561 | 71.914 | 324 | 74 | 3 | 1 | 307 | 6 | 329 | 5.19e-165 | 461 |
| Msa1146460 | MtrunA17_Chr3g0131891 | 69.745 | 314 | 88 | 2 | 1 | 307 | 7 | 320 | 1.31e-160 | 451 |
| Msa1146460 | MtrunA17_Chr7g0233541 | 69.463 | 298 | 72 | 5 | 28 | 307 | 1 | 297 | 1.52e-144 | 409 |
| Msa1146460 | MtrunA17_Chr7g0233521 | 66.216 | 296 | 68 | 7 | 28 | 307 | 1 | 280 | 5.29e-132 | 376 |
| Msa1146460 | MtrunA17_Chr7g0233571 | 57.944 | 214 | 70 | 5 | 7 | 201 | 4 | 216 | 9.33e-78 | 236 |
| Msa1146460 | MtrunA17_Chr8g0390841 | 35.127 | 316 | 148 | 8 | 11 | 290 | 37 | 331 | 2.52e-48 | 169 |
| Msa1146460 | MtrunA17_Chr8g0390841 | 25.175 | 286 | 197 | 9 | 13 | 290 | 242 | 518 | 9.35e-14 | 71.6 |
| Msa1146460 | MtrunA17_Chr1g0208771 | 33.444 | 302 | 151 | 8 | 29 | 297 | 13 | 297 | 6.38e-46 | 161 |
| Msa1146460 | MtrunA17_Chr1g0163071 | 33.115 | 305 | 158 | 7 | 28 | 297 | 1 | 294 | 9.23e-45 | 154 |
| Msa1146460 | MtrunA17_Chr3g0103181 | 33.569 | 283 | 173 | 8 | 10 | 289 | 9 | 279 | 5.59e-39 | 138 |
| Msa1146460 | MtrunA17_Chr1g0163261 | 31.667 | 300 | 180 | 7 | 10 | 298 | 6 | 291 | 9.57e-35 | 128 |
| Msa1146460 | MtrunA17_Chr3g0103191 | 34.673 | 199 | 116 | 4 | 10 | 200 | 9 | 201 | 1.01e-33 | 124 |
| Msa1146460 | MtrunA17_Chr1g0171611 | 33.333 | 282 | 163 | 9 | 10 | 288 | 6 | 265 | 1.89e-33 | 124 |
| Msa1146460 | MtrunA17_Chr1g0163231 | 30.282 | 284 | 181 | 7 | 10 | 288 | 6 | 277 | 1.31e-32 | 122 |
| Msa1146460 | MtrunA17_Chr1g0163181 | 30.847 | 295 | 179 | 8 | 22 | 298 | 14 | 301 | 6.24e-31 | 120 |
| Msa1146460 | MtrunA17_Chr3g0103171 | 29.478 | 268 | 174 | 9 | 29 | 289 | 6 | 265 | 7.35e-30 | 114 |
| Msa1146460 | MtrunA17_Chr5g0419201 | 36.000 | 175 | 97 | 3 | 13 | 175 | 16 | 187 | 6.41e-29 | 109 |
| Msa1146460 | MtrunA17_Chr3g0103151 | 49.038 | 104 | 51 | 1 | 10 | 113 | 9 | 110 | 2.75e-28 | 107 |
| Msa1146460 | MtrunA17_Chr1g0163221 | 31.034 | 290 | 181 | 8 | 11 | 289 | 9 | 290 | 3.55e-28 | 111 |
| Msa1146460 | MtrunA17_Chr1g0163251 | 29.352 | 293 | 187 | 8 | 13 | 298 | 9 | 288 | 3.85e-27 | 109 |
| Msa1146460 | MtrunA17_Chr1g0163201 | 31.522 | 276 | 166 | 8 | 29 | 290 | 19 | 285 | 1.34e-26 | 108 |
| Msa1146460 | MtrunA17_Chr4g0067431 | 29.276 | 304 | 185 | 9 | 11 | 289 | 13 | 311 | 9.37e-26 | 104 |
| Msa1146460 | MtrunA17_Chr3g0077451 | 27.341 | 267 | 155 | 5 | 27 | 293 | 10 | 237 | 7.85e-24 | 97.4 |
| Msa1146460 | MtrunA17_Chr1g0154131 | 28.522 | 291 | 179 | 8 | 11 | 282 | 182 | 462 | 9.71e-24 | 100 |
| Msa1146460 | MtrunA17_Chr1g0154131 | 27.737 | 137 | 83 | 2 | 11 | 132 | 24 | 159 | 1.50e-11 | 64.7 |
| Msa1146460 | MtrunA17_Chr1g0154161 | 26.266 | 316 | 179 | 10 | 11 | 297 | 28 | 318 | 6.69e-23 | 96.7 |
| Msa1146460 | MtrunA17_Chr3g0077411 | 29.352 | 293 | 165 | 11 | 11 | 293 | 260 | 520 | 8.60e-23 | 98.2 |
| Msa1146460 | MtrunA17_Chr3g0077411 | 32.673 | 101 | 68 | 0 | 12 | 112 | 24 | 124 | 3.85e-16 | 78.6 |
| Msa1146460 | MtrunA17_Chr6g0467351 | 36.364 | 165 | 92 | 3 | 11 | 174 | 13 | 165 | 2.41e-22 | 93.2 |
| Msa1146460 | MtrunA17_Chr5g0429931 | 27.957 | 279 | 143 | 9 | 29 | 293 | 11 | 245 | 1.04e-21 | 92.0 |
| Msa1146460 | MtrunA17_Chr1g0154171 | 25.000 | 328 | 191 | 8 | 11 | 289 | 21 | 342 | 1.85e-21 | 93.2 |
| Msa1146460 | MtrunA17_Chr1g0154191 | 25.000 | 340 | 186 | 8 | 11 | 288 | 20 | 352 | 4.44e-21 | 92.4 |
| Msa1146460 | MtrunA17_Chr1g0162441 | 41.414 | 99 | 58 | 0 | 13 | 111 | 7 | 105 | 5.26e-21 | 92.8 |
| Msa1146460 | MtrunA17_Chr1g0162441 | 29.197 | 137 | 91 | 2 | 160 | 296 | 268 | 398 | 2.26e-13 | 70.1 |
| Msa1146460 | MtrunA17_Chr3g0077461 | 29.537 | 281 | 144 | 9 | 4 | 281 | 230 | 459 | 1.12e-20 | 92.0 |
| Msa1146460 | MtrunA17_Chr3g0077461 | 29.907 | 107 | 74 | 1 | 29 | 134 | 23 | 129 | 7.80e-14 | 71.6 |
| Msa1146460 | MtrunA17_Chr1g0163131 | 27.331 | 311 | 176 | 8 | 7 | 286 | 12 | 303 | 2.81e-20 | 89.0 |
| Msa1146460 | MtrunA17_Chr4g0033961 | 38.095 | 105 | 63 | 1 | 13 | 115 | 6 | 110 | 2.17e-19 | 87.8 |
| Msa1146460 | MtrunA17_Chr4g0033961 | 31.618 | 136 | 87 | 2 | 160 | 295 | 264 | 393 | 2.05e-14 | 73.2 |
| Msa1146460 | MtrunA17_Chr3g0103201 | 28.879 | 232 | 143 | 9 | 68 | 289 | 1 | 220 | 3.78e-19 | 84.3 |
| Msa1146460 | MtrunA17_Chr1g0163101 | 36.923 | 130 | 77 | 3 | 8 | 135 | 12 | 138 | 9.17e-19 | 82.4 |
| Msa1146460 | MtrunA17_Chr1g0154151 | 24.062 | 320 | 174 | 8 | 16 | 289 | 14 | 310 | 9.26e-18 | 82.4 |
| Msa1146460 | MtrunA17_Chr3g0077431 | 27.848 | 237 | 132 | 5 | 57 | 293 | 1 | 198 | 7.95e-17 | 77.4 |
| Msa1146460 | MtrunA17_Chr1g0162411 | 38.384 | 99 | 59 | 1 | 13 | 111 | 7 | 103 | 2.43e-16 | 79.0 |
| Msa1146460 | MtrunA17_Chr1g0163141 | 40.594 | 101 | 52 | 3 | 27 | 127 | 9 | 101 | 3.49e-16 | 75.5 |
| Msa1146460 | MtrunA17_Chr1g0163121 | 31.333 | 150 | 83 | 4 | 27 | 176 | 9 | 138 | 4.14e-16 | 73.9 |
| Msa1146460 | MtrunA17_Chr4g0009491 | 27.536 | 207 | 122 | 5 | 12 | 217 | 224 | 403 | 1.39e-15 | 76.6 |
| Msa1146460 | MtrunA17_Chr4g0009491 | 30.579 | 121 | 83 | 1 | 27 | 146 | 11 | 131 | 2.56e-14 | 73.2 |
| Msa1146460 | MtrunA17_Chr1g0163061 | 40.952 | 105 | 61 | 1 | 11 | 114 | 13 | 117 | 2.18e-15 | 74.7 |
| Msa1146460 | MtrunA17_Chr3g0077381 | 32.203 | 118 | 71 | 2 | 27 | 144 | 34 | 142 | 2.29e-15 | 76.3 |
| Msa1146460 | MtrunA17_Chr3g0077381 | 27.317 | 205 | 125 | 5 | 12 | 214 | 246 | 428 | 8.21e-14 | 71.6 |
| Msa1146460 | MtrunA17_Chr1g0163241 | 37.000 | 100 | 61 | 1 | 29 | 128 | 23 | 120 | 2.93e-15 | 72.4 |
| Msa1146460 | MtrunA17_Chr3g0077421 | 27.197 | 239 | 132 | 7 | 57 | 293 | 1 | 199 | 7.10e-15 | 72.0 |
| Msa1146460 | MtrunA17_Chr3g0077441 | 27.197 | 239 | 132 | 7 | 57 | 293 | 1 | 199 | 7.10e-15 | 72.0 |
| Msa1146460 | MtrunA17_Chr1g0163191 | 37.037 | 108 | 60 | 2 | 22 | 129 | 14 | 113 | 7.53e-15 | 70.9 |
| Msa1146460 | MtrunA17_Chr3g0077361 | 23.134 | 268 | 151 | 5 | 12 | 277 | 39 | 253 | 1.67e-14 | 73.9 |
| Msa1146460 | MtrunA17_Chr1g0154211 | 36.559 | 93 | 58 | 1 | 11 | 103 | 21 | 112 | 4.12e-14 | 72.4 |
| Msa1146460 | MtrunA17_Chr1g0154251 | 36.559 | 93 | 58 | 1 | 11 | 103 | 25 | 116 | 4.36e-14 | 72.4 |
| Msa1146460 | MtrunA17_Chr1g0154101 | 37.634 | 93 | 56 | 2 | 11 | 103 | 182 | 272 | 1.11e-13 | 71.6 |
| Msa1146460 | MtrunA17_Chr1g0154101 | 35.870 | 92 | 59 | 0 | 11 | 102 | 23 | 114 | 1.60e-13 | 71.2 |
| Msa1146460 | MtrunA17_Chr1g0154241 | 35.052 | 97 | 62 | 1 | 11 | 107 | 20 | 115 | 9.40e-13 | 67.4 |
| Msa1146460 | MtrunA17_Chr6g0476181 | 38.710 | 93 | 54 | 2 | 28 | 120 | 1 | 90 | 1.76e-12 | 64.3 |
| Msa1146460 | MtrunA17_Chr1g0163081 | 36.842 | 95 | 57 | 2 | 28 | 122 | 5 | 96 | 3.73e-12 | 63.2 |
| Msa1146460 | MtrunA17_Chr1g0154071 | 35.556 | 90 | 57 | 1 | 14 | 103 | 157 | 245 | 3.89e-12 | 66.6 |
| Msa1146460 | MtrunA17_Chr1g0154071 | 31.959 | 97 | 65 | 1 | 11 | 107 | 26 | 121 | 1.38e-11 | 65.1 |
| Msa1146460 | MtrunA17_Chr1g0154111 | 35.870 | 92 | 59 | 0 | 11 | 102 | 24 | 115 | 1.33e-11 | 65.1 |
| Msa1146460 | MtrunA17_Chr1g0162161 | 35.955 | 89 | 54 | 2 | 28 | 116 | 3 | 88 | 1.37e-11 | 62.0 |
| Msa1146460 | MtrunA17_Chr1g0154041 | 32.673 | 101 | 67 | 1 | 8 | 108 | 11 | 110 | 2.11e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146460 | AT3G18990.2 | 26.686 | 341 | 183 | 6 | 13 | 293 | 6 | 339 | 1.05e-31 | 122 |
| Msa1146460 | AT3G18990.1 | 26.627 | 338 | 181 | 6 | 13 | 290 | 6 | 336 | 1.45e-31 | 120 |
| Msa1146460 | AT4G01580.1 | 43.269 | 104 | 59 | 0 | 13 | 116 | 30 | 133 | 1.34e-22 | 93.2 |
| Msa1146460 | AT1G49475.1 | 40.517 | 116 | 68 | 1 | 13 | 128 | 34 | 148 | 3.09e-22 | 92.4 |
| Msa1146460 | AT4G33280.1 | 27.900 | 319 | 183 | 15 | 11 | 297 | 23 | 326 | 1.11e-21 | 94.0 |
| Msa1146460 | AT3G18960.2 | 34.211 | 152 | 84 | 2 | 13 | 148 | 30 | 181 | 2.30e-21 | 90.1 |
| Msa1146460 | AT3G18960.1 | 34.211 | 152 | 84 | 2 | 13 | 148 | 30 | 181 | 3.97e-21 | 89.7 |
| Msa1146460 | AT3G18960.3 | 35.294 | 136 | 72 | 2 | 29 | 148 | 9 | 144 | 7.15e-18 | 80.1 |
| Msa1146460 | AT3G53310.1 | 33.333 | 102 | 63 | 2 | 3 | 104 | 5 | 101 | 7.42e-12 | 65.1 |
Find 40 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGCTAACTCCTTTGAATT+TGG | 0.175508 | 7_4:+24116544 | Msa1146460:CDS |
| TGGAAAATGGAAATTAAATT+TGG | 0.234349 | 7_4:+24116276 | Msa1146460:CDS |
| AGAAAATTTGTGGAGAAATA+TGG | 0.268462 | 7_4:+24116211 | Msa1146460:CDS |
| GTCTTTAGACATGTTTCTTT+TGG | 0.282527 | 7_4:-24116244 | None:intergenic |
| AGACTCCAAATGGTGGAAAA+TGG | 0.283126 | 7_4:+24116263 | Msa1146460:CDS |
| CAAGGAAATGAATCTCTAAA+TGG | 0.329233 | 7_4:+24116493 | Msa1146460:CDS |
| AGTAGTAGTTGTGTTAAAGT+TGG | 0.371498 | 7_4:+24116568 | Msa1146460:CDS |
| AGGTGTTAAATGAAGGAGTT+TGG | 0.387476 | 7_4:+24117257 | Msa1146460:CDS |
| TGGTAATAGACACTTTGATT+TGG | 0.391800 | 7_4:+24117207 | Msa1146460:CDS |
| CAGAATATACCACGTATGTT+TGG | 0.412403 | 7_4:+24117187 | Msa1146460:intron |
| GATGATGCCAAGAAAATTTG+TGG | 0.418421 | 7_4:+24116201 | Msa1146460:intron |
| GTAGTAGTTGTGTTAAAGTT+GGG | 0.429796 | 7_4:+24116569 | Msa1146460:CDS |
| AGATTCATTTCCTTGATCAA+TGG | 0.441958 | 7_4:-24116485 | None:intergenic |
| ATCAAATTGTAGTCCTGTAC+TGG | 0.447350 | 7_4:-24117305 | None:intergenic |
| TGGCAAGGTATGGTTTGAAA+AGG | 0.450397 | 7_4:+24116309 | Msa1146460:CDS |
| ATGAAGGAGTTTGGCCTACA+AGG | 0.459083 | 7_4:+24117266 | Msa1146460:CDS |
| CGCATGACAACAACAAATGA+TGG | 0.473085 | 7_4:-24116828 | None:intergenic |
| AAAGGCTTACAAGCTTTCCT+TGG | 0.474678 | 7_4:-24115414 | None:intergenic |
| TTTGATTTGGATAAGAAAAG+AGG | 0.493087 | 7_4:+24117220 | Msa1146460:CDS |
| CATGGCTAGTGAAATTTATG+AGG | 0.497255 | 7_4:+24115345 | None:intergenic |
| ACATGTCTAAAGACTCCAAA+TGG | 0.505252 | 7_4:+24116253 | Msa1146460:CDS |
| GAGGACAATAACTTGAAAGT+TGG | 0.523457 | 7_4:+24117355 | Msa1146460:CDS |
| TCTAAAGATATGAACAATGA+AGG | 0.524509 | 7_4:-24117419 | None:intergenic |
| TTACAAGCTTTCCTTGGTGA+AGG | 0.528265 | 7_4:-24115408 | None:intergenic |
| AGGTATGGTTTGAAAAGGGT+TGG | 0.528620 | 7_4:+24116314 | Msa1146460:CDS |
| TTCCTGATAGAAAACCTTGT+AGG | 0.540464 | 7_4:-24117280 | None:intergenic |
| GGCAAGGTATGGTTTGAAAA+GGG | 0.548981 | 7_4:+24116310 | Msa1146460:CDS |
| TCTATCAGGAAGTCCAGTAC+AGG | 0.551024 | 7_4:+24117292 | Msa1146460:CDS |
| ACTACTACTTCCAAATTCAA+AGG | 0.556173 | 7_4:-24116554 | None:intergenic |
| TGATATCACAAGTGGATGGA+AGG | 0.558355 | 7_4:+24117324 | Msa1146460:CDS |
| TGTTGAACATAGATTTCTGA+TGG | 0.558556 | 7_4:+24116860 | Msa1146460:CDS |
| ATATGTACCTCAAAATTGGA+AGG | 0.569214 | 7_4:-24116400 | None:intergenic |
| GAGCATCACTCTCTAGCTCA+TGG | 0.577825 | 7_4:+24116349 | Msa1146460:CDS |
| CTACAATTTGATATCACAAG+TGG | 0.598375 | 7_4:+24117316 | Msa1146460:CDS |
| AATTTGATATCACAAGTGGA+TGG | 0.625506 | 7_4:+24117320 | Msa1146460:CDS |
| AAATCACAAAAGAAGTCCAA+AGG | 0.633010 | 7_4:+24116592 | Msa1146460:CDS |
| TGTCTAAAGACTCCAAATGG+TGG | 0.636064 | 7_4:+24116256 | Msa1146460:CDS |
| TGGATGGAAGGCATTTGCAG+AGG | 0.673309 | 7_4:+24117336 | Msa1146460:CDS |
| CTTGCTCAAAACCTTCACCA+AGG | 0.698372 | 7_4:+24115397 | Msa1146460:CDS |
| TGTCTATTACCAAACATACG+TGG | 0.737084 | 7_4:-24117196 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CCAAAAAATACATAAAATTA+AGG | - | chr7_4:24115693-24115712 | None:intergenic | 15.0% |
| !!! | CCTTAATTTTATGTATTTTT+TGG | + | chr7_4:24115690-24115709 | Msa1146460:intron | 15.0% |
| !! | TCATATTTAACAATATGAAT+AGG | - | chr7_4:24115958-24115977 | None:intergenic | 15.0% |
| !! | TGTTAAATATGAAAAAATGA+AGG | + | chr7_4:24115966-24115985 | Msa1146460:intron | 15.0% |
| !! | GTTAAATATGAAAAAATGAA+GGG | + | chr7_4:24115967-24115986 | Msa1146460:intron | 15.0% |
| !! | CGAAAAATAATATTATGATT+TGG | + | chr7_4:24116075-24116094 | Msa1146460:intron | 15.0% |
| !!! | TAATTATTTTGCATTACTTT+AGG | - | chr7_4:24116133-24116152 | None:intergenic | 15.0% |
| !! | ATTTAAAAATAATTTACCTG+TGG | + | chr7_4:24116975-24116994 | Msa1146460:intron | 15.0% |
| !! | CCAAAAAATACATAAAATTA+AGG | - | chr7_4:24115693-24115712 | None:intergenic | 15.0% |
| !!! | CCTTAATTTTATGTATTTTT+TGG | + | chr7_4:24115690-24115709 | Msa1146460:intron | 15.0% |
| !! | TCATATTTAACAATATGAAT+AGG | - | chr7_4:24115958-24115977 | None:intergenic | 15.0% |
| !! | TGTTAAATATGAAAAAATGA+AGG | + | chr7_4:24115966-24115985 | Msa1146460:intron | 15.0% |
| !! | GTTAAATATGAAAAAATGAA+GGG | + | chr7_4:24115967-24115986 | Msa1146460:intron | 15.0% |
| !! | CGAAAAATAATATTATGATT+TGG | + | chr7_4:24116075-24116094 | Msa1146460:intron | 15.0% |
| !!! | TAATTATTTTGCATTACTTT+AGG | - | chr7_4:24116133-24116152 | None:intergenic | 15.0% |
| !! | ATTTAAAAATAATTTACCTG+TGG | + | chr7_4:24116975-24116994 | Msa1146460:intron | 15.0% |
| !! | AACATTATCAAAGAATCTAA+AGG | - | chr7_4:24115435-24115454 | None:intergenic | 20.0% |
| !! | AAACTTTAATATTACTTCAC+AGG | + | chr7_4:24115559-24115578 | Msa1146460:intron | 20.0% |
| !! | ACAAAATTCCCTAATTAAAT+TGG | - | chr7_4:24115908-24115927 | None:intergenic | 20.0% |
| !! | TTATAAAATTTGAATACCGT+AGG | + | chr7_4:24116040-24116059 | Msa1146460:intron | 20.0% |
| !! | TATAAAATTTGAATACCGTA+GGG | + | chr7_4:24116041-24116060 | Msa1146460:intron | 20.0% |
| !! | ATCGTACATATCAATATATA+TGG | + | chr7_4:24116163-24116182 | Msa1146460:intron | 20.0% |
| !! | TGGAAAATGGAAATTAAATT+TGG | + | chr7_4:24116276-24116295 | Msa1146460:CDS | 20.0% |
| !! | TTAAATTTGGTAAAAAGTGA+TGG | + | chr7_4:24116289-24116308 | Msa1146460:CDS | 20.0% |
| !! | AAAAATATGTACCTCAAAAT+TGG | - | chr7_4:24116407-24116426 | None:intergenic | 20.0% |
| !!! | CCTTTTTTTTTTTTTACCTT+TGG | - | chr7_4:24116611-24116630 | None:intergenic | 20.0% |
| !! | CCAAAGGTAAAAAAAAAAAA+AGG | + | chr7_4:24116608-24116627 | Msa1146460:intron | 20.0% |
| !! | GTTAATGAATAAAAAATGTG+TGG | - | chr7_4:24117145-24117164 | None:intergenic | 20.0% |
| !! | AACATTATCAAAGAATCTAA+AGG | - | chr7_4:24115435-24115454 | None:intergenic | 20.0% |
| !! | AAACTTTAATATTACTTCAC+AGG | + | chr7_4:24115559-24115578 | Msa1146460:intron | 20.0% |
| !! | ACAAAATTCCCTAATTAAAT+TGG | - | chr7_4:24115908-24115927 | None:intergenic | 20.0% |
| !! | TTATAAAATTTGAATACCGT+AGG | + | chr7_4:24116040-24116059 | Msa1146460:intron | 20.0% |
| !! | TATAAAATTTGAATACCGTA+GGG | + | chr7_4:24116041-24116060 | Msa1146460:intron | 20.0% |
| !! | ATCGTACATATCAATATATA+TGG | + | chr7_4:24116163-24116182 | Msa1146460:intron | 20.0% |
| !! | TGGAAAATGGAAATTAAATT+TGG | + | chr7_4:24116276-24116295 | Msa1146460:CDS | 20.0% |
| !! | TTAAATTTGGTAAAAAGTGA+TGG | + | chr7_4:24116289-24116308 | Msa1146460:CDS | 20.0% |
| !! | AAAAATATGTACCTCAAAAT+TGG | - | chr7_4:24116407-24116426 | None:intergenic | 20.0% |
| !!! | CCTTTTTTTTTTTTTACCTT+TGG | - | chr7_4:24116611-24116630 | None:intergenic | 20.0% |
| !! | CCAAAGGTAAAAAAAAAAAA+AGG | + | chr7_4:24116608-24116627 | Msa1146460:intron | 20.0% |
| !! | GTTAATGAATAAAAAATGTG+TGG | - | chr7_4:24117145-24117164 | None:intergenic | 20.0% |
| ! | ATGATCTTGAAAAAGTGAAT+TGG | - | chr7_4:24115376-24115395 | None:intergenic | 25.0% |
| !!! | ACATGATGTTACTTTGTATT+TGG | + | chr7_4:24115510-24115529 | Msa1146460:intron | 25.0% |
| !! | AGTTTACTTGCTAAAAATGA+TGG | + | chr7_4:24115727-24115746 | Msa1146460:intron | 25.0% |
| !! | TATTTCTCCACAAATTTTCT+TGG | - | chr7_4:24116211-24116230 | None:intergenic | 25.0% |
| ! | AGAAAATTTGTGGAGAAATA+TGG | + | chr7_4:24116211-24116230 | Msa1146460:CDS | 25.0% |
| !! | CTTTTTATCTTCAACTCTTT+TGG | - | chr7_4:24116461-24116480 | None:intergenic | 25.0% |
| ! | TACTAAATTGGAACATTATC+AGG | - | chr7_4:24116677-24116696 | None:intergenic | 25.0% |
| !! | TGATAATGTTCCAATTTAGT+AGG | + | chr7_4:24116676-24116695 | Msa1146460:intron | 25.0% |
| !! | TCTAGTCTTTAGTAGATTAA+GGG | + | chr7_4:24116932-24116951 | Msa1146460:intron | 25.0% |
| !! | AAATAATTTACCTGTGGTTT+TGG | + | chr7_4:24116981-24117000 | Msa1146460:intron | 25.0% |
| !!! | CATTCGTTTTTTCTTTTGTT+TGG | + | chr7_4:24117164-24117183 | Msa1146460:intron | 25.0% |
| !!! | TTTGATTTGGATAAGAAAAG+AGG | + | chr7_4:24117220-24117239 | Msa1146460:CDS | 25.0% |
| !!! | AAGAGGAGATATTTATTTTC+AGG | + | chr7_4:24117237-24117256 | Msa1146460:CDS | 25.0% |
| !!! | TATTTTCAGGTGTTAAATGA+AGG | + | chr7_4:24117250-24117269 | Msa1146460:CDS | 25.0% |
| ! | TCTAAAGATATGAACAATGA+AGG | - | chr7_4:24117422-24117441 | None:intergenic | 25.0% |
| ! | ATGATCTTGAAAAAGTGAAT+TGG | - | chr7_4:24115376-24115395 | None:intergenic | 25.0% |
| !!! | ACATGATGTTACTTTGTATT+TGG | + | chr7_4:24115510-24115529 | Msa1146460:intron | 25.0% |
| !! | AGTTTACTTGCTAAAAATGA+TGG | + | chr7_4:24115727-24115746 | Msa1146460:intron | 25.0% |
| !! | TATTTCTCCACAAATTTTCT+TGG | - | chr7_4:24116211-24116230 | None:intergenic | 25.0% |
| ! | AGAAAATTTGTGGAGAAATA+TGG | + | chr7_4:24116211-24116230 | Msa1146460:CDS | 25.0% |
| !! | CTTTTTATCTTCAACTCTTT+TGG | - | chr7_4:24116461-24116480 | None:intergenic | 25.0% |
| ! | TACTAAATTGGAACATTATC+AGG | - | chr7_4:24116677-24116696 | None:intergenic | 25.0% |
| !! | TGATAATGTTCCAATTTAGT+AGG | + | chr7_4:24116676-24116695 | Msa1146460:intron | 25.0% |
| !! | TCTAGTCTTTAGTAGATTAA+GGG | + | chr7_4:24116932-24116951 | Msa1146460:intron | 25.0% |
| !! | AAATAATTTACCTGTGGTTT+TGG | + | chr7_4:24116981-24117000 | Msa1146460:intron | 25.0% |
| !!! | CATTCGTTTTTTCTTTTGTT+TGG | + | chr7_4:24117164-24117183 | Msa1146460:intron | 25.0% |
| !!! | TTTGATTTGGATAAGAAAAG+AGG | + | chr7_4:24117220-24117239 | Msa1146460:CDS | 25.0% |
| !!! | AAGAGGAGATATTTATTTTC+AGG | + | chr7_4:24117237-24117256 | Msa1146460:CDS | 25.0% |
| !!! | TATTTTCAGGTGTTAAATGA+AGG | + | chr7_4:24117250-24117269 | Msa1146460:CDS | 25.0% |
| ! | TCTAAAGATATGAACAATGA+AGG | - | chr7_4:24117422-24117441 | None:intergenic | 25.0% |
| AAAATGACTCAATTGCTTTC+AGG | - | chr7_4:24115644-24115663 | None:intergenic | 30.0% | |
| TAAAAATGATGGTTGCTCTT+AGG | + | chr7_4:24115738-24115757 | Msa1146460:intron | 30.0% | |
| ! | TGGTCTTGCCAATTTAATTA+GGG | + | chr7_4:24115897-24115916 | Msa1146460:intron | 30.0% |
| ATGAAAAAATGAAGGGTTTC+TGG | + | chr7_4:24115974-24115993 | Msa1146460:intron | 30.0% | |
| ! | GTCTTTAGACATGTTTCTTT+TGG | - | chr7_4:24116247-24116266 | None:intergenic | 30.0% |
| ! | AATTTCCATTTTCCACCATT+TGG | - | chr7_4:24116271-24116290 | None:intergenic | 30.0% |
| CATATCTAAAAAGCAGAAGA+TGG | - | chr7_4:24116375-24116394 | None:intergenic | 30.0% | |
| ! | TGAAAAACCTTCCAATTTTG+AGG | + | chr7_4:24116393-24116412 | Msa1146460:CDS | 30.0% |
| ATATGTACCTCAAAATTGGA+AGG | - | chr7_4:24116403-24116422 | None:intergenic | 30.0% | |
| !! | TATTTTTGAAAAGAGTGCGT+TGG | + | chr7_4:24116420-24116439 | Msa1146460:CDS | 30.0% |
| ! | TATCTTCAACTCTTTTGGTA+GGG | - | chr7_4:24116456-24116475 | None:intergenic | 30.0% |
| ! | TTATCTTCAACTCTTTTGGT+AGG | - | chr7_4:24116457-24116476 | None:intergenic | 30.0% |
| AAAAAGATCTCCATTGATCA+AGG | + | chr7_4:24116475-24116494 | Msa1146460:CDS | 30.0% | |
| AGATTCATTTCCTTGATCAA+TGG | - | chr7_4:24116488-24116507 | None:intergenic | 30.0% | |
| CAAGGAAATGAATCTCTAAA+TGG | + | chr7_4:24116493-24116512 | Msa1146460:CDS | 30.0% | |
| AAAGCTAACTCCTTTGAATT+TGG | + | chr7_4:24116544-24116563 | Msa1146460:CDS | 30.0% | |
| ACTACTACTTCCAAATTCAA+AGG | - | chr7_4:24116557-24116576 | None:intergenic | 30.0% | |
| AGTAGTAGTTGTGTTAAAGT+TGG | + | chr7_4:24116568-24116587 | Msa1146460:CDS | 30.0% | |
| GTAGTAGTTGTGTTAAAGTT+GGG | + | chr7_4:24116569-24116588 | Msa1146460:CDS | 30.0% | |
| AAATCACAAAAGAAGTCCAA+AGG | + | chr7_4:24116592-24116611 | Msa1146460:CDS | 30.0% | |
| ACATGAAATGCCTACTAAAT+TGG | - | chr7_4:24116689-24116708 | None:intergenic | 30.0% | |
| TGCAAAATTGGAACATTATC+AGG | - | chr7_4:24116736-24116755 | None:intergenic | 30.0% | |
| !! | TGATAATGTTCCAATTTTGC+AGG | + | chr7_4:24116735-24116754 | Msa1146460:intron | 30.0% |
| TGTTGAACATAGATTTCTGA+TGG | + | chr7_4:24116860-24116879 | Msa1146460:CDS | 30.0% | |
| ! | CTAGAGAAAGATTTGGTTAT+TGG | - | chr7_4:24116917-24116936 | None:intergenic | 30.0% |
| CTAAAGACTAGAGAAAGATT+TGG | - | chr7_4:24116924-24116943 | None:intergenic | 30.0% | |
| ! | CTCTAGTCTTTAGTAGATTA+AGG | + | chr7_4:24116931-24116950 | Msa1146460:intron | 30.0% |
| ! | CTAGTCTTTAGTAGATTAAG+GGG | + | chr7_4:24116933-24116952 | Msa1146460:intron | 30.0% |
| TGGTAATAGACACTTTGATT+TGG | + | chr7_4:24117207-24117226 | Msa1146460:CDS | 30.0% | |
| CTACAATTTGATATCACAAG+TGG | + | chr7_4:24117316-24117335 | Msa1146460:CDS | 30.0% | |
| AATTTGATATCACAAGTGGA+TGG | + | chr7_4:24117320-24117339 | Msa1146460:CDS | 30.0% | |
| AAAATGACTCAATTGCTTTC+AGG | - | chr7_4:24115644-24115663 | None:intergenic | 30.0% | |
| TAAAAATGATGGTTGCTCTT+AGG | + | chr7_4:24115738-24115757 | Msa1146460:intron | 30.0% | |
| ! | TGGTCTTGCCAATTTAATTA+GGG | + | chr7_4:24115897-24115916 | Msa1146460:intron | 30.0% |
| ATGAAAAAATGAAGGGTTTC+TGG | + | chr7_4:24115974-24115993 | Msa1146460:intron | 30.0% | |
| ! | GTCTTTAGACATGTTTCTTT+TGG | - | chr7_4:24116247-24116266 | None:intergenic | 30.0% |
| ! | AATTTCCATTTTCCACCATT+TGG | - | chr7_4:24116271-24116290 | None:intergenic | 30.0% |
| CATATCTAAAAAGCAGAAGA+TGG | - | chr7_4:24116375-24116394 | None:intergenic | 30.0% | |
| ! | TGAAAAACCTTCCAATTTTG+AGG | + | chr7_4:24116393-24116412 | Msa1146460:CDS | 30.0% |
| ATATGTACCTCAAAATTGGA+AGG | - | chr7_4:24116403-24116422 | None:intergenic | 30.0% | |
| !! | TATTTTTGAAAAGAGTGCGT+TGG | + | chr7_4:24116420-24116439 | Msa1146460:CDS | 30.0% |
| ! | TATCTTCAACTCTTTTGGTA+GGG | - | chr7_4:24116456-24116475 | None:intergenic | 30.0% |
| ! | TTATCTTCAACTCTTTTGGT+AGG | - | chr7_4:24116457-24116476 | None:intergenic | 30.0% |
| AAAAAGATCTCCATTGATCA+AGG | + | chr7_4:24116475-24116494 | Msa1146460:CDS | 30.0% | |
| AGATTCATTTCCTTGATCAA+TGG | - | chr7_4:24116488-24116507 | None:intergenic | 30.0% | |
| CAAGGAAATGAATCTCTAAA+TGG | + | chr7_4:24116493-24116512 | Msa1146460:CDS | 30.0% | |
| AAAGCTAACTCCTTTGAATT+TGG | + | chr7_4:24116544-24116563 | Msa1146460:CDS | 30.0% | |
| ACTACTACTTCCAAATTCAA+AGG | - | chr7_4:24116557-24116576 | None:intergenic | 30.0% | |
| AGTAGTAGTTGTGTTAAAGT+TGG | + | chr7_4:24116568-24116587 | Msa1146460:CDS | 30.0% | |
| GTAGTAGTTGTGTTAAAGTT+GGG | + | chr7_4:24116569-24116588 | Msa1146460:CDS | 30.0% | |
| AAATCACAAAAGAAGTCCAA+AGG | + | chr7_4:24116592-24116611 | Msa1146460:CDS | 30.0% | |
| ACATGAAATGCCTACTAAAT+TGG | - | chr7_4:24116689-24116708 | None:intergenic | 30.0% | |
| TGCAAAATTGGAACATTATC+AGG | - | chr7_4:24116736-24116755 | None:intergenic | 30.0% | |
| !! | TGATAATGTTCCAATTTTGC+AGG | + | chr7_4:24116735-24116754 | Msa1146460:intron | 30.0% |
| TGTTGAACATAGATTTCTGA+TGG | + | chr7_4:24116860-24116879 | Msa1146460:CDS | 30.0% | |
| ! | CTAGAGAAAGATTTGGTTAT+TGG | - | chr7_4:24116917-24116936 | None:intergenic | 30.0% |
| CTAAAGACTAGAGAAAGATT+TGG | - | chr7_4:24116924-24116943 | None:intergenic | 30.0% | |
| ! | CTCTAGTCTTTAGTAGATTA+AGG | + | chr7_4:24116931-24116950 | Msa1146460:intron | 30.0% |
| ! | CTAGTCTTTAGTAGATTAAG+GGG | + | chr7_4:24116933-24116952 | Msa1146460:intron | 30.0% |
| TGGTAATAGACACTTTGATT+TGG | + | chr7_4:24117207-24117226 | Msa1146460:CDS | 30.0% | |
| CTACAATTTGATATCACAAG+TGG | + | chr7_4:24117316-24117335 | Msa1146460:CDS | 30.0% | |
| AATTTGATATCACAAGTGGA+TGG | + | chr7_4:24117320-24117339 | Msa1146460:CDS | 30.0% | |
| CCTTCTGTTATGTCATCATA+AGG | - | chr7_4:24115589-24115608 | None:intergenic | 35.0% | |
| CCTTATGATGACATAACAGA+AGG | + | chr7_4:24115586-24115605 | Msa1146460:intron | 35.0% | |
| ! | GCTGCTTTAATTAGAAACTG+AGG | + | chr7_4:24115791-24115810 | Msa1146460:intron | 35.0% |
| GCTTTAATTAGAAACTGAGG+AGG | + | chr7_4:24115794-24115813 | Msa1146460:intron | 35.0% | |
| AGCTTGAAACACATCAGATT+GGG | - | chr7_4:24115837-24115856 | None:intergenic | 35.0% | |
| TAGCTTGAAACACATCAGAT+TGG | - | chr7_4:24115838-24115857 | None:intergenic | 35.0% | |
| AATCTGATGTGTTTCAAGCT+AGG | + | chr7_4:24115837-24115856 | Msa1146460:intron | 35.0% | |
| !! | CTGGTCTTGCCAATTTAATT+AGG | + | chr7_4:24115896-24115915 | Msa1146460:intron | 35.0% |
| GGATGTATGAAAAGAGAGAA+GGG | - | chr7_4:24115937-24115956 | None:intergenic | 35.0% | |
| AGGATGTATGAAAAGAGAGA+AGG | - | chr7_4:24115938-24115957 | None:intergenic | 35.0% | |
| ! | AAAAAATGAAGGGTTTCTGG+CGG | + | chr7_4:24115977-24115996 | Msa1146460:intron | 35.0% |
| GATGATGCCAAGAAAATTTG+TGG | + | chr7_4:24116201-24116220 | Msa1146460:intron | 35.0% | |
| ACATGTCTAAAGACTCCAAA+TGG | + | chr7_4:24116253-24116272 | Msa1146460:CDS | 35.0% | |
| TTTGGTAAAAAGTGATGGCA+AGG | + | chr7_4:24116294-24116313 | Msa1146460:CDS | 35.0% | |
| TAAAAAGTGATGGCAAGGTA+TGG | + | chr7_4:24116299-24116318 | Msa1146460:CDS | 35.0% | |
| !! | CACTTGTTTTCCTGCAAAAT+TGG | - | chr7_4:24116748-24116767 | None:intergenic | 35.0% |
| CTTAAGAGAAACACACTATG+AGG | - | chr7_4:24117014-24117033 | None:intergenic | 35.0% | |
| CTCATAGTGTGTTTCTCTTA+AGG | + | chr7_4:24117012-24117031 | Msa1146460:intron | 35.0% | |
| CAGAATATACCACGTATGTT+TGG | + | chr7_4:24117187-24117206 | Msa1146460:intron | 35.0% | |
| TGTCTATTACCAAACATACG+TGG | - | chr7_4:24117199-24117218 | None:intergenic | 35.0% | |
| AGGTGTTAAATGAAGGAGTT+TGG | + | chr7_4:24117257-24117276 | Msa1146460:CDS | 35.0% | |
| TTCCTGATAGAAAACCTTGT+AGG | - | chr7_4:24117283-24117302 | None:intergenic | 35.0% | |
| ATCAAATTGTAGTCCTGTAC+TGG | - | chr7_4:24117308-24117327 | None:intergenic | 35.0% | |
| GAGGACAATAACTTGAAAGT+TGG | + | chr7_4:24117355-24117374 | Msa1146460:CDS | 35.0% | |
| CCTTCTGTTATGTCATCATA+AGG | - | chr7_4:24115589-24115608 | None:intergenic | 35.0% | |
| CCTTATGATGACATAACAGA+AGG | + | chr7_4:24115586-24115605 | Msa1146460:intron | 35.0% | |
| ! | GCTGCTTTAATTAGAAACTG+AGG | + | chr7_4:24115791-24115810 | Msa1146460:intron | 35.0% |
| GCTTTAATTAGAAACTGAGG+AGG | + | chr7_4:24115794-24115813 | Msa1146460:intron | 35.0% | |
| AGCTTGAAACACATCAGATT+GGG | - | chr7_4:24115837-24115856 | None:intergenic | 35.0% | |
| TAGCTTGAAACACATCAGAT+TGG | - | chr7_4:24115838-24115857 | None:intergenic | 35.0% | |
| AATCTGATGTGTTTCAAGCT+AGG | + | chr7_4:24115837-24115856 | Msa1146460:intron | 35.0% | |
| !! | CTGGTCTTGCCAATTTAATT+AGG | + | chr7_4:24115896-24115915 | Msa1146460:intron | 35.0% |
| GGATGTATGAAAAGAGAGAA+GGG | - | chr7_4:24115937-24115956 | None:intergenic | 35.0% | |
| AGGATGTATGAAAAGAGAGA+AGG | - | chr7_4:24115938-24115957 | None:intergenic | 35.0% | |
| ! | AAAAAATGAAGGGTTTCTGG+CGG | + | chr7_4:24115977-24115996 | Msa1146460:intron | 35.0% |
| GATGATGCCAAGAAAATTTG+TGG | + | chr7_4:24116201-24116220 | Msa1146460:intron | 35.0% | |
| ACATGTCTAAAGACTCCAAA+TGG | + | chr7_4:24116253-24116272 | Msa1146460:CDS | 35.0% | |
| TTTGGTAAAAAGTGATGGCA+AGG | + | chr7_4:24116294-24116313 | Msa1146460:CDS | 35.0% | |
| TAAAAAGTGATGGCAAGGTA+TGG | + | chr7_4:24116299-24116318 | Msa1146460:CDS | 35.0% | |
| !! | CACTTGTTTTCCTGCAAAAT+TGG | - | chr7_4:24116748-24116767 | None:intergenic | 35.0% |
| CTTAAGAGAAACACACTATG+AGG | - | chr7_4:24117014-24117033 | None:intergenic | 35.0% | |
| CTCATAGTGTGTTTCTCTTA+AGG | + | chr7_4:24117012-24117031 | Msa1146460:intron | 35.0% | |
| CAGAATATACCACGTATGTT+TGG | + | chr7_4:24117187-24117206 | Msa1146460:intron | 35.0% | |
| TGTCTATTACCAAACATACG+TGG | - | chr7_4:24117199-24117218 | None:intergenic | 35.0% | |
| AGGTGTTAAATGAAGGAGTT+TGG | + | chr7_4:24117257-24117276 | Msa1146460:CDS | 35.0% | |
| TTCCTGATAGAAAACCTTGT+AGG | - | chr7_4:24117283-24117302 | None:intergenic | 35.0% | |
| ATCAAATTGTAGTCCTGTAC+TGG | - | chr7_4:24117308-24117327 | None:intergenic | 35.0% | |
| GAGGACAATAACTTGAAAGT+TGG | + | chr7_4:24117355-24117374 | Msa1146460:CDS | 35.0% | |
| TTACAAGCTTTCCTTGGTGA+AGG | - | chr7_4:24115411-24115430 | None:intergenic | 40.0% | |
| AAAGGCTTACAAGCTTTCCT+TGG | - | chr7_4:24115417-24115436 | None:intergenic | 40.0% | |
| !! | GCAATTGAGTCATTTTACCC+CGG | + | chr7_4:24115648-24115667 | Msa1146460:intron | 40.0% |
| GATGTGTTTCAAGCTAGGTT+AGG | + | chr7_4:24115842-24115861 | Msa1146460:intron | 40.0% | |
| AGTTTCACACGCCACAAATT+TGG | - | chr7_4:24115871-24115890 | None:intergenic | 40.0% | |
| GTATGAAAAGAGAGAAGGGT+GGG | - | chr7_4:24115933-24115952 | None:intergenic | 40.0% | |
| TGTATGAAAAGAGAGAAGGG+TGG | - | chr7_4:24115934-24115953 | None:intergenic | 40.0% | |
| TGTCTAAAGACTCCAAATGG+TGG | + | chr7_4:24116256-24116275 | Msa1146460:CDS | 40.0% | |
| ! | AGACTCCAAATGGTGGAAAA+TGG | + | chr7_4:24116263-24116282 | Msa1146460:CDS | 40.0% |
| TGGCAAGGTATGGTTTGAAA+AGG | + | chr7_4:24116309-24116328 | Msa1146460:CDS | 40.0% | |
| GGCAAGGTATGGTTTGAAAA+GGG | + | chr7_4:24116310-24116329 | Msa1146460:CDS | 40.0% | |
| AGGTATGGTTTGAAAAGGGT+TGG | + | chr7_4:24116314-24116333 | Msa1146460:CDS | 40.0% | |
| CGCATGACAACAACAAATGA+TGG | - | chr7_4:24116831-24116850 | None:intergenic | 40.0% | |
| TGTGTTTCTCTTAAGGTCTC+AGG | + | chr7_4:24117019-24117038 | Msa1146460:intron | 40.0% | |
| GTCTCAGGTAAGATTTACCT+CGG | + | chr7_4:24117034-24117053 | Msa1146460:intron | 40.0% | |
| !! | GATTTACCTCGGTGCAATTT+TGG | + | chr7_4:24117045-24117064 | Msa1146460:intron | 40.0% |
| TGATATCACAAGTGGATGGA+AGG | + | chr7_4:24117324-24117343 | Msa1146460:CDS | 40.0% | |
| TTACAAGCTTTCCTTGGTGA+AGG | - | chr7_4:24115411-24115430 | None:intergenic | 40.0% | |
| AAAGGCTTACAAGCTTTCCT+TGG | - | chr7_4:24115417-24115436 | None:intergenic | 40.0% | |
| !! | GCAATTGAGTCATTTTACCC+CGG | + | chr7_4:24115648-24115667 | Msa1146460:intron | 40.0% |
| GATGTGTTTCAAGCTAGGTT+AGG | + | chr7_4:24115842-24115861 | Msa1146460:intron | 40.0% | |
| AGTTTCACACGCCACAAATT+TGG | - | chr7_4:24115871-24115890 | None:intergenic | 40.0% | |
| GTATGAAAAGAGAGAAGGGT+GGG | - | chr7_4:24115933-24115952 | None:intergenic | 40.0% | |
| TGTATGAAAAGAGAGAAGGG+TGG | - | chr7_4:24115934-24115953 | None:intergenic | 40.0% | |
| TGTCTAAAGACTCCAAATGG+TGG | + | chr7_4:24116256-24116275 | Msa1146460:CDS | 40.0% | |
| ! | AGACTCCAAATGGTGGAAAA+TGG | + | chr7_4:24116263-24116282 | Msa1146460:CDS | 40.0% |
| TGGCAAGGTATGGTTTGAAA+AGG | + | chr7_4:24116309-24116328 | Msa1146460:CDS | 40.0% | |
| GGCAAGGTATGGTTTGAAAA+GGG | + | chr7_4:24116310-24116329 | Msa1146460:CDS | 40.0% | |
| AGGTATGGTTTGAAAAGGGT+TGG | + | chr7_4:24116314-24116333 | Msa1146460:CDS | 40.0% | |
| CGCATGACAACAACAAATGA+TGG | - | chr7_4:24116831-24116850 | None:intergenic | 40.0% | |
| TGTGTTTCTCTTAAGGTCTC+AGG | + | chr7_4:24117019-24117038 | Msa1146460:intron | 40.0% | |
| GTCTCAGGTAAGATTTACCT+CGG | + | chr7_4:24117034-24117053 | Msa1146460:intron | 40.0% | |
| !! | GATTTACCTCGGTGCAATTT+TGG | + | chr7_4:24117045-24117064 | Msa1146460:intron | 40.0% |
| TGATATCACAAGTGGATGGA+AGG | + | chr7_4:24117324-24117343 | Msa1146460:CDS | 40.0% | |
| CTTGCTCAAAACCTTCACCA+AGG | + | chr7_4:24115397-24115416 | Msa1146460:CDS | 45.0% | |
| !! | CATTTTACCCCGGTTCGAAT+TGG | + | chr7_4:24115658-24115677 | Msa1146460:intron | 45.0% |
| AGGTTAGGCCACCAAATTTG+TGG | + | chr7_4:24115857-24115876 | Msa1146460:intron | 45.0% | |
| TTCACACGCCACAAATTTGG+TGG | - | chr7_4:24115868-24115887 | None:intergenic | 45.0% | |
| !!! | GGCGGTGTTTTAACGTGTTT+TGG | + | chr7_4:24115995-24116014 | Msa1146460:intron | 45.0% |
| !! | TTACCTCGGTGCAATTTTGG+TGG | + | chr7_4:24117048-24117067 | Msa1146460:intron | 45.0% |
| ATACCACCAAAATTGCACCG+AGG | - | chr7_4:24117054-24117073 | None:intergenic | 45.0% | |
| ATGAAGGAGTTTGGCCTACA+AGG | + | chr7_4:24117266-24117285 | Msa1146460:CDS | 45.0% | |
| ! | GGCCTACAAGGTTTTCTATC+AGG | + | chr7_4:24117278-24117297 | Msa1146460:CDS | 45.0% |
| TCTATCAGGAAGTCCAGTAC+AGG | + | chr7_4:24117292-24117311 | Msa1146460:CDS | 45.0% | |
| CTTGCTCAAAACCTTCACCA+AGG | + | chr7_4:24115397-24115416 | Msa1146460:CDS | 45.0% | |
| !! | CATTTTACCCCGGTTCGAAT+TGG | + | chr7_4:24115658-24115677 | Msa1146460:intron | 45.0% |
| AGGTTAGGCCACCAAATTTG+TGG | + | chr7_4:24115857-24115876 | Msa1146460:intron | 45.0% | |
| TTCACACGCCACAAATTTGG+TGG | - | chr7_4:24115868-24115887 | None:intergenic | 45.0% | |
| !!! | GGCGGTGTTTTAACGTGTTT+TGG | + | chr7_4:24115995-24116014 | Msa1146460:intron | 45.0% |
| !! | TTACCTCGGTGCAATTTTGG+TGG | + | chr7_4:24117048-24117067 | Msa1146460:intron | 45.0% |
| ATACCACCAAAATTGCACCG+AGG | - | chr7_4:24117054-24117073 | None:intergenic | 45.0% | |
| ATGAAGGAGTTTGGCCTACA+AGG | + | chr7_4:24117266-24117285 | Msa1146460:CDS | 45.0% | |
| ! | GGCCTACAAGGTTTTCTATC+AGG | + | chr7_4:24117278-24117297 | Msa1146460:CDS | 45.0% |
| TCTATCAGGAAGTCCAGTAC+AGG | + | chr7_4:24117292-24117311 | Msa1146460:CDS | 45.0% | |
| TCAAGCGAGCCAATTCGAAC+CGG | - | chr7_4:24115670-24115689 | None:intergenic | 50.0% | |
| TGGCGTGTGAAACTGTGAAC+TGG | + | chr7_4:24115877-24115896 | Msa1146460:intron | 50.0% | |
| TTCGTTTCTCTCACGCCCTA+CGG | - | chr7_4:24116059-24116078 | None:intergenic | 50.0% | |
| ! | GAGCATCACTCTCTAGCTCA+TGG | + | chr7_4:24116349-24116368 | Msa1146460:CDS | 50.0% |
| ! | AGGTCTGAAGCCAAAACCAC+AGG | - | chr7_4:24116994-24117013 | None:intergenic | 50.0% |
| !! | TGGATGGAAGGCATTTGCAG+AGG | + | chr7_4:24117336-24117355 | Msa1146460:CDS | 50.0% |
| TCAAGCGAGCCAATTCGAAC+CGG | - | chr7_4:24115670-24115689 | None:intergenic | 50.0% | |
| TGGCGTGTGAAACTGTGAAC+TGG | + | chr7_4:24115877-24115896 | Msa1146460:intron | 50.0% | |
| TTCGTTTCTCTCACGCCCTA+CGG | - | chr7_4:24116059-24116078 | None:intergenic | 50.0% | |
| ! | GAGCATCACTCTCTAGCTCA+TGG | + | chr7_4:24116349-24116368 | Msa1146460:CDS | 50.0% |
| ! | AGGTCTGAAGCCAAAACCAC+AGG | - | chr7_4:24116994-24117013 | None:intergenic | 50.0% |
| !! | TGGATGGAAGGCATTTGCAG+AGG | + | chr7_4:24117336-24117355 | Msa1146460:CDS | 50.0% |
| AAGCGAGCCAATTCGAACCG+GGG | - | chr7_4:24115668-24115687 | None:intergenic | 55.0% | |
| CAAGCGAGCCAATTCGAACC+GGG | - | chr7_4:24115669-24115688 | None:intergenic | 55.0% | |
| AAGCGAGCCAATTCGAACCG+GGG | - | chr7_4:24115668-24115687 | None:intergenic | 55.0% | |
| CAAGCGAGCCAATTCGAACC+GGG | - | chr7_4:24115669-24115688 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 24115346 | 24117495 | 24115346 | ID=Msa1146460;Name=Msa1146460 |
| chr7_4 | mRNA | 24115346 | 24117495 | 24115346 | ID=Msa1146460-mRNA-1;Parent=Msa1146460;Name=Msa1146460-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|0.75|4|0|307 |
| chr7_4 | exon | 24115346 | 24115426 | 24115346 | ID=Msa1146460-mRNA-1:exon:6018;Parent=Msa1146460-mRNA-1 |
| chr7_4 | exon | 24116202 | 24116613 | 24116202 | ID=Msa1146460-mRNA-1:exon:6019;Parent=Msa1146460-mRNA-1 |
| chr7_4 | exon | 24116757 | 24116881 | 24116757 | ID=Msa1146460-mRNA-1:exon:6020;Parent=Msa1146460-mRNA-1 |
| chr7_4 | exon | 24117190 | 24117495 | 24117190 | ID=Msa1146460-mRNA-1:exon:6021;Parent=Msa1146460-mRNA-1 |
| chr7_4 | CDS | 24115346 | 24115426 | 24115346 | ID=Msa1146460-mRNA-1:cds;Parent=Msa1146460-mRNA-1 |
| chr7_4 | CDS | 24116202 | 24116613 | 24116202 | ID=Msa1146460-mRNA-1:cds;Parent=Msa1146460-mRNA-1 |
| chr7_4 | CDS | 24116757 | 24116881 | 24116757 | ID=Msa1146460-mRNA-1:cds;Parent=Msa1146460-mRNA-1 |
| chr7_4 | CDS | 24117190 | 24117495 | 24117190 | ID=Msa1146460-mRNA-1:cds;Parent=Msa1146460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
