Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146470 | XP_003622666.4 | 57.471 | 261 | 51 | 4 | 1 | 202 | 1 | 260 | 9.46e-89 | 274 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146470 | sp|Q8L3W1|VRN1_ARATH | 44.118 | 102 | 53 | 1 | 13 | 110 | 6 | 107 | 2.50e-20 | 90.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146470 | G7KVW6 | 54.264 | 258 | 61 | 2 | 1 | 201 | 1 | 258 | 2.34e-84 | 262 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1146470 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146470 | MtrunA17_Chr7g0233561 | 54.264 | 258 | 61 | 2 | 1 | 201 | 6 | 263 | 6.48e-88 | 261 |
| Msa1146470 | MtrunA17_Chr3g0131891 | 54.545 | 253 | 54 | 3 | 1 | 198 | 7 | 253 | 5.90e-85 | 254 |
| Msa1146470 | MtrunA17_Chr7g0233571 | 69.767 | 172 | 40 | 4 | 1 | 164 | 1 | 168 | 2.01e-76 | 229 |
| Msa1146470 | MtrunA17_Chr7g0233541 | 55.128 | 234 | 45 | 4 | 28 | 202 | 1 | 233 | 7.32e-76 | 230 |
| Msa1146470 | MtrunA17_Chr7g0233521 | 53.680 | 231 | 35 | 4 | 28 | 201 | 1 | 216 | 4.95e-70 | 214 |
| Msa1146470 | MtrunA17_Chr7g0233531 | 54.018 | 224 | 47 | 5 | 28 | 202 | 1 | 217 | 2.32e-69 | 213 |
| Msa1146470 | MtrunA17_Chr8g0390841 | 39.873 | 158 | 88 | 3 | 11 | 164 | 37 | 191 | 5.47e-31 | 118 |
| Msa1146470 | MtrunA17_Chr3g0103151 | 50.000 | 104 | 46 | 2 | 11 | 110 | 10 | 111 | 4.46e-28 | 103 |
| Msa1146470 | MtrunA17_Chr3g0103191 | 50.485 | 103 | 45 | 2 | 11 | 109 | 10 | 110 | 5.73e-28 | 105 |
| Msa1146470 | MtrunA17_Chr5g0419201 | 40.458 | 131 | 69 | 3 | 9 | 130 | 12 | 142 | 9.74e-27 | 100 |
| Msa1146470 | MtrunA17_Chr3g0103181 | 50.495 | 101 | 44 | 2 | 11 | 107 | 10 | 108 | 1.51e-25 | 100 |
| Msa1146470 | MtrunA17_Chr1g0163071 | 37.908 | 153 | 81 | 5 | 28 | 167 | 1 | 152 | 3.59e-25 | 99.8 |
| Msa1146470 | MtrunA17_Chr1g0208771 | 38.356 | 146 | 79 | 4 | 29 | 167 | 13 | 154 | 2.95e-23 | 96.3 |
| Msa1146470 | MtrunA17_Chr3g0103171 | 47.674 | 86 | 41 | 1 | 29 | 110 | 6 | 91 | 3.18e-21 | 88.2 |
| Msa1146470 | MtrunA17_Chr6g0467351 | 38.889 | 144 | 74 | 5 | 11 | 141 | 13 | 155 | 7.51e-21 | 86.7 |
| Msa1146470 | MtrunA17_Chr1g0163101 | 37.984 | 129 | 71 | 4 | 9 | 131 | 13 | 138 | 7.87e-21 | 85.5 |
| Msa1146470 | MtrunA17_Chr3g0077411 | 30.636 | 173 | 105 | 4 | 7 | 175 | 19 | 180 | 3.08e-20 | 87.8 |
| Msa1146470 | MtrunA17_Chr3g0077411 | 36.190 | 105 | 62 | 2 | 9 | 108 | 258 | 362 | 7.28e-17 | 78.2 |
| Msa1146470 | MtrunA17_Chr1g0171611 | 41.748 | 103 | 54 | 2 | 13 | 111 | 9 | 109 | 3.05e-19 | 83.6 |
| Msa1146470 | MtrunA17_Chr4g0067431 | 43.689 | 103 | 53 | 2 | 11 | 108 | 13 | 115 | 3.39e-19 | 83.6 |
| Msa1146470 | MtrunA17_Chr4g0033961 | 37.736 | 106 | 62 | 1 | 8 | 109 | 1 | 106 | 3.70e-19 | 84.3 |
| Msa1146470 | MtrunA17_Chr1g0162441 | 38.614 | 101 | 58 | 1 | 13 | 109 | 7 | 107 | 1.02e-18 | 83.2 |
| Msa1146470 | MtrunA17_Chr1g0163131 | 37.209 | 129 | 74 | 3 | 7 | 131 | 12 | 137 | 1.29e-18 | 82.0 |
| Msa1146470 | MtrunA17_Chr1g0163251 | 44.660 | 103 | 47 | 3 | 13 | 111 | 9 | 105 | 2.00e-18 | 82.4 |
| Msa1146470 | MtrunA17_Chr1g0163231 | 32.000 | 150 | 91 | 3 | 13 | 153 | 9 | 156 | 5.70e-18 | 80.1 |
| Msa1146470 | MtrunA17_Chr3g0077381 | 30.108 | 186 | 114 | 6 | 27 | 202 | 34 | 213 | 1.50e-17 | 80.1 |
| Msa1146470 | MtrunA17_Chr3g0077381 | 32.479 | 117 | 75 | 1 | 9 | 121 | 243 | 359 | 7.72e-12 | 63.5 |
| Msa1146470 | MtrunA17_Chr1g0163181 | 37.097 | 124 | 71 | 3 | 22 | 140 | 14 | 135 | 2.69e-17 | 79.3 |
| Msa1146470 | MtrunA17_Chr1g0163191 | 41.748 | 103 | 50 | 3 | 13 | 111 | 9 | 105 | 4.67e-17 | 75.1 |
| Msa1146470 | MtrunA17_Chr3g0077461 | 30.464 | 151 | 83 | 4 | 29 | 175 | 23 | 155 | 8.58e-17 | 77.8 |
| Msa1146470 | MtrunA17_Chr3g0077461 | 36.937 | 111 | 66 | 1 | 2 | 108 | 226 | 336 | 1.12e-16 | 77.4 |
| Msa1146470 | MtrunA17_Chr1g0163121 | 42.593 | 108 | 55 | 3 | 27 | 130 | 9 | 113 | 1.15e-16 | 73.6 |
| Msa1146470 | MtrunA17_Chr1g0162411 | 37.000 | 100 | 61 | 1 | 13 | 110 | 7 | 106 | 1.32e-16 | 77.4 |
| Msa1146470 | MtrunA17_Chr4g0009491 | 31.538 | 130 | 81 | 3 | 27 | 151 | 11 | 137 | 3.59e-16 | 75.9 |
| Msa1146470 | MtrunA17_Chr4g0009491 | 33.333 | 117 | 74 | 1 | 9 | 121 | 221 | 337 | 1.67e-13 | 68.2 |
| Msa1146470 | MtrunA17_Chr1g0163241 | 41.667 | 96 | 45 | 3 | 29 | 115 | 23 | 116 | 3.27e-15 | 70.1 |
| Msa1146470 | MtrunA17_Chr1g0163221 | 28.804 | 184 | 120 | 4 | 7 | 184 | 5 | 183 | 7.09e-15 | 72.0 |
| Msa1146470 | MtrunA17_Chr1g0163261 | 32.450 | 151 | 91 | 3 | 13 | 154 | 9 | 157 | 7.69e-15 | 71.6 |
| Msa1146470 | MtrunA17_Chr1g0163061 | 38.835 | 103 | 58 | 2 | 11 | 108 | 13 | 115 | 1.21e-14 | 70.5 |
| Msa1146470 | MtrunA17_Chr3g0077361 | 29.870 | 154 | 88 | 5 | 3 | 143 | 30 | 176 | 2.20e-14 | 70.9 |
| Msa1146470 | MtrunA17_Chr1g0162161 | 37.615 | 109 | 60 | 4 | 28 | 131 | 3 | 108 | 3.81e-14 | 67.4 |
| Msa1146470 | MtrunA17_Chr1g0163141 | 40.000 | 100 | 53 | 3 | 27 | 122 | 9 | 105 | 4.44e-14 | 67.8 |
| Msa1146470 | MtrunA17_Chr1g0163201 | 41.379 | 87 | 45 | 2 | 29 | 111 | 19 | 103 | 5.89e-14 | 69.7 |
| Msa1146470 | MtrunA17_Chr3g0077451 | 30.631 | 111 | 72 | 1 | 27 | 137 | 10 | 115 | 2.14e-13 | 66.6 |
| Msa1146470 | MtrunA17_Chr5g0429931 | 34.524 | 84 | 51 | 1 | 29 | 108 | 11 | 94 | 1.18e-12 | 64.7 |
| Msa1146470 | MtrunA17_Chr1g0154101 | 33.708 | 89 | 59 | 0 | 11 | 99 | 23 | 111 | 1.57e-12 | 65.9 |
| Msa1146470 | MtrunA17_Chr1g0163081 | 36.134 | 119 | 68 | 4 | 28 | 141 | 5 | 120 | 2.63e-12 | 62.0 |
| Msa1146470 | MtrunA17_Chr1g0154251 | 32.584 | 89 | 59 | 1 | 11 | 99 | 25 | 112 | 4.02e-12 | 64.3 |
| Msa1146470 | MtrunA17_Chr1g0154161 | 32.584 | 89 | 60 | 0 | 11 | 99 | 28 | 116 | 4.31e-12 | 63.9 |
| Msa1146470 | MtrunA17_Chr1g0154211 | 33.708 | 89 | 58 | 1 | 11 | 99 | 21 | 108 | 4.78e-12 | 63.9 |
| Msa1146470 | MtrunA17_Chr6g0476181 | 38.462 | 104 | 57 | 3 | 28 | 127 | 1 | 101 | 7.84e-12 | 60.8 |
| Msa1146470 | MtrunA17_Chr1g0154071 | 35.165 | 91 | 57 | 1 | 9 | 99 | 153 | 241 | 1.04e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146470 | AT3G18990.1 | 44.118 | 102 | 53 | 1 | 13 | 110 | 6 | 107 | 2.54e-21 | 90.1 |
| Msa1146470 | AT3G18990.2 | 44.118 | 102 | 53 | 1 | 13 | 110 | 6 | 107 | 3.88e-21 | 90.1 |
| Msa1146470 | AT1G49475.1 | 41.739 | 115 | 62 | 2 | 6 | 116 | 27 | 140 | 4.91e-21 | 86.7 |
| Msa1146470 | AT4G01580.1 | 40.187 | 107 | 60 | 1 | 6 | 108 | 23 | 129 | 4.01e-20 | 84.0 |
| Msa1146470 | AT3G18960.1 | 38.739 | 111 | 64 | 1 | 2 | 108 | 19 | 129 | 1.81e-19 | 82.8 |
| Msa1146470 | AT3G18960.2 | 40.187 | 107 | 60 | 1 | 6 | 108 | 23 | 129 | 1.92e-19 | 82.4 |
| Msa1146470 | AT3G18960.3 | 43.182 | 88 | 46 | 1 | 29 | 112 | 9 | 96 | 1.59e-15 | 71.6 |
Find 38 sgRNAs with CRISPR-Local
Find 377 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAAAATGGACATTAAATT+TGG | 0.181659 | 7_4:+24130018 | Msa1146470:CDS |
| CCACAAGAGTTGAAGCTAAA+AGG | 0.209640 | 7_4:+24130200 | Msa1146470:CDS |
| TATTTCTCCACAAACTTTCT+TGG | 0.217927 | 7_4:-24129950 | None:intergenic |
| TTCCTCTTTATGTATCTTGC+AGG | 0.255610 | 7_4:-24135278 | None:intergenic |
| ATTTGGAGTCTTTAGATATA+TGG | 0.264588 | 7_4:-24129993 | None:intergenic |
| AGAAAGTTTGTGGAGAAATA+TGG | 0.293086 | 7_4:+24129953 | Msa1146470:CDS |
| TTTCATCAACCACGTGAAAT+AGG | 0.293751 | 7_4:+24130307 | Msa1146470:CDS |
| GCTCTACAATCGTCGTTATC+TGG | 0.301142 | 7_4:-24130250 | None:intergenic |
| AGACTCCAAATGGTGCAAAA+TGG | 0.339005 | 7_4:+24130005 | Msa1146470:CDS |
| CAGAATATACCAGTTAAGTT+TGG | 0.352430 | 7_4:+24135185 | Msa1146470:intron |
| TGGTAAGACACACTTTGATT+TGG | 0.385393 | 7_4:+24135205 | Msa1146470:CDS |
| GGAAGGATAACTTATCTCTA+AGG | 0.403624 | 7_4:-24130179 | None:intergenic |
| TGTGTCTTACCAAACTTAAC+TGG | 0.416239 | 7_4:-24135194 | None:intergenic |
| TGGCAAGATATGGTTTGAAA+AGG | 0.433004 | 7_4:+24130051 | Msa1146470:CDS |
| AGCAGTAGTTGTGTTAAAGT+TGG | 0.434623 | 7_4:+24130331 | Msa1146470:CDS |
| CACAAGAGTTGAAGCTAAAA+GGG | 0.438433 | 7_4:+24130201 | Msa1146470:CDS |
| AGGTGTTAGATGGAAGAGTT+TGG | 0.443848 | 7_4:+24135255 | Msa1146470:CDS |
| GATGATGCCAAGAAAGTTTG+TGG | 0.445895 | 7_4:+24129943 | Msa1146470:intron |
| CATATTTGAAAAGCAGAAGA+TGG | 0.450028 | 7_4:-24130114 | None:intergenic |
| GCAGTAGTTGTGTTAAAGTT+GGG | 0.473793 | 7_4:+24130332 | Msa1146470:CDS |
| AGATATGGTTTGAAAAGGGT+TGG | 0.475702 | 7_4:+24130056 | Msa1146470:CDS |
| CTTCACCTCAGGAATTTCAC+TGG | 0.477594 | 7_4:-24128380 | None:intergenic |
| ATATATCTAAAGACTCCAAA+TGG | 0.497009 | 7_4:+24129995 | Msa1146470:CDS |
| GGCAAGATATGGTTTGAAAA+GGG | 0.522590 | 7_4:+24130052 | Msa1146470:CDS |
| GGTTGATGAAATTCAAATGA+GGG | 0.525738 | 7_4:-24130295 | None:intergenic |
| TAAAGTTGGGCAATCAGAAA+AGG | 0.533483 | 7_4:+24130345 | Msa1146470:CDS |
| AAGTGGATTGACTTCACCTC+AGG | 0.534487 | 7_4:-24128391 | None:intergenic |
| TTAGCTTCAACTCTTGTGGA+AGG | 0.534946 | 7_4:-24130196 | None:intergenic |
| TGGTTGATGAAATTCAAATG+AGG | 0.559107 | 7_4:-24130296 | None:intergenic |
| CTTACTCACAACATTCATGA+AGG | 0.573729 | 7_4:+24128427 | Msa1146470:CDS |
| TTTGATTTGGAAAAGAAGAG+AGG | 0.575098 | 7_4:+24135218 | Msa1146470:CDS |
| TTTGTGGAGAAATATGGAGA+AGG | 0.578281 | 7_4:+24129959 | Msa1146470:CDS |
| GAGCATCACTCACTAGCTCA+TGG | 0.596433 | 7_4:+24130091 | Msa1146470:CDS |
| GGCCTGCAAGATACATAAAG+AGG | 0.599113 | 7_4:+24135276 | Msa1146470:CDS |
| CTACTGCTTCCTATTTCACG+TGG | 0.603938 | 7_4:-24130316 | None:intergenic |
| GTTGATGAAATTCAAATGAG+GGG | 0.615052 | 7_4:-24130294 | None:intergenic |
| GAAGCTAAAAGGGTCTCGAA+TGG | 0.643697 | 7_4:+24130211 | Msa1146470:CDS |
| CATGGCCAGTGAAATTCCTG+AGG | 0.703012 | 7_4:+24128375 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTAATTTATGATTTTCT+TGG | + | chr7_4:24129014-24129033 | Msa1146470:intron | 10.0% |
| !!! | TATTAATTTATGATTTTCTT+GGG | + | chr7_4:24129015-24129034 | Msa1146470:intron | 10.0% |
| !!! | TATTTTACTGTAATAATTTT+TGG | - | chr7_4:24130554-24130573 | None:intergenic | 10.0% |
| !! | AATTAAATTGCTAATAAAAA+CGG | + | chr7_4:24131497-24131516 | Msa1146470:intron | 10.0% |
| !!! | ATATGGAAAAATATTTTAAT+AGG | - | chr7_4:24131712-24131731 | None:intergenic | 10.0% |
| !!! | ATATTTTTAATTGAGAAATA+TGG | - | chr7_4:24131729-24131748 | None:intergenic | 10.0% |
| !! | ATATTTCTCAATTAAAAATA+TGG | + | chr7_4:24131728-24131747 | Msa1146470:intron | 10.0% |
| !! | TATTTCTCAATTAAAAATAT+GGG | + | chr7_4:24131729-24131748 | Msa1146470:intron | 10.0% |
| !!! | TTTAAACTTTTGAAATATAT+GGG | - | chr7_4:24131805-24131824 | None:intergenic | 10.0% |
| !!! | TTTTAAACTTTTGAAATATA+TGG | - | chr7_4:24131806-24131825 | None:intergenic | 10.0% |
| !! | TATACTTGAAAAATAAATTA+TGG | - | chr7_4:24133059-24133078 | None:intergenic | 10.0% |
| !!! | CTATTTCTTTAATTTTATTT+TGG | - | chr7_4:24133172-24133191 | None:intergenic | 10.0% |
| !! | AATTAAATTGCTAATAAAAA+CGG | + | chr7_4:24131497-24131516 | Msa1146470:intron | 10.0% |
| !!! | ATATGGAAAAATATTTTAAT+AGG | - | chr7_4:24131712-24131731 | None:intergenic | 10.0% |
| !!! | ATATTTTTAATTGAGAAATA+TGG | - | chr7_4:24131729-24131748 | None:intergenic | 10.0% |
| !! | ATATTTCTCAATTAAAAATA+TGG | + | chr7_4:24131728-24131747 | Msa1146470:intron | 10.0% |
| !! | TATTTCTCAATTAAAAATAT+GGG | + | chr7_4:24131729-24131748 | Msa1146470:intron | 10.0% |
| !! | TGTTTCTTTATCTTATAAAA+TGG | + | chr7_4:24128495-24128514 | Msa1146470:intron | 15.0% |
| !! | ACTCTATAAATTAATAATGT+TGG | + | chr7_4:24128702-24128721 | Msa1146470:intron | 15.0% |
| !! | CTCTATAAATTAATAATGTT+GGG | + | chr7_4:24128703-24128722 | Msa1146470:intron | 15.0% |
| !! | TCTAAATTAATAAATTTCTC+CGG | - | chr7_4:24128730-24128749 | None:intergenic | 15.0% |
| !!! | AGTTTTTCAATTTTTTACAT+TGG | + | chr7_4:24129091-24129110 | Msa1146470:intron | 15.0% |
| !!! | TCTAAAATAATAAATTTGTC+CGG | - | chr7_4:24129129-24129148 | None:intergenic | 15.0% |
| !!! | ATTCAATTGTTAATTTGTTA+TGG | - | chr7_4:24129604-24129623 | None:intergenic | 15.0% |
| !! | AAAATAGATTATGAAATGTT+TGG | + | chr7_4:24130568-24130587 | Msa1146470:intron | 15.0% |
| !! | AAATAGATTATGAAATGTTT+GGG | + | chr7_4:24130569-24130588 | Msa1146470:intron | 15.0% |
| !! | TTTACTATAAAATTTACTCT+TGG | - | chr7_4:24130665-24130684 | None:intergenic | 15.0% |
| !!! | TTAAACTTTTGAAATATATG+GGG | - | chr7_4:24131804-24131823 | None:intergenic | 15.0% |
| !! | TTAGAAAAAAAAAAACTTCA+TGG | + | chr7_4:24131830-24131849 | Msa1146470:intron | 15.0% |
| !! | TAGAAAAAAAAAAACTTCAT+GGG | + | chr7_4:24131831-24131850 | Msa1146470:intron | 15.0% |
| !!! | AAATTCATTAAAAGCTTTAT+AGG | + | chr7_4:24132187-24132206 | Msa1146470:intron | 15.0% |
| !! | TAAACTTTGATAAATATATG+AGG | - | chr7_4:24132546-24132565 | None:intergenic | 15.0% |
| !! | TATTTGTAGATTTATTATAC+AGG | + | chr7_4:24132651-24132670 | Msa1146470:intron | 15.0% |
| !! | TATGTATAGATTTATTATAC+AGG | + | chr7_4:24132911-24132930 | Msa1146470:intron | 15.0% |
| !! | TATTATACTTATATTCTTTG+AGG | - | chr7_4:24133110-24133129 | None:intergenic | 15.0% |
| !!! | ATATTTTAATTATTGTTACC+TGG | + | chr7_4:24133841-24133860 | Msa1146470:intron | 15.0% |
| !! | TTAAAAATCATATAACAAAG+TGG | + | chr7_4:24135070-24135089 | Msa1146470:intron | 15.0% |
| !!! | ATAGAGTTTTAACTGTATTT+AGG | - | chr7_4:24128689-24128708 | None:intergenic | 20.0% |
| !!! | GACTAATTTGTTTTTTTGTT+TGG | - | chr7_4:24128822-24128841 | None:intergenic | 20.0% |
| !! | AAACTCTTTGAATTAATACT+CGG | - | chr7_4:24129167-24129186 | None:intergenic | 20.0% |
| !!! | GTTAATTTGTTATGGTATTT+GGG | - | chr7_4:24129596-24129615 | None:intergenic | 20.0% |
| !!! | TGTTAATTTGTTATGGTATT+TGG | - | chr7_4:24129597-24129616 | None:intergenic | 20.0% |
| !! | TTAAATTTGGTAAAAAGTGA+TGG | + | chr7_4:24130031-24130050 | Msa1146470:CDS | 20.0% |
| !!! | ACGTTTTAGTATTTAGTTAT+AGG | + | chr7_4:24130518-24130537 | Msa1146470:intron | 20.0% |
| !!! | CGTTTTAGTATTTAGTTATA+GGG | + | chr7_4:24130519-24130538 | Msa1146470:intron | 20.0% |
| !!! | AAATTAGTTGTCTTTAGAAT+TGG | + | chr7_4:24130604-24130623 | Msa1146470:intron | 20.0% |
| !! | AATTCAATGCCTATAAAAAA+GGG | - | chr7_4:24131454-24131473 | None:intergenic | 20.0% |
| !!! | ATTAGTTGTTGTTATTTACT+TGG | - | chr7_4:24131599-24131618 | None:intergenic | 20.0% |
| !! | AATAACAACAACTAATAATG+TGG | + | chr7_4:24131603-24131622 | Msa1146470:intron | 20.0% |
| !!! | TAAACTTTTGAAATATATGG+GGG | - | chr7_4:24131803-24131822 | None:intergenic | 20.0% |
| !! | TGTTAAGTATTATCATTCTA+GGG | - | chr7_4:24131910-24131929 | None:intergenic | 20.0% |
| !! | ATGAATTTCATATTCCTTAT+GGG | - | chr7_4:24132175-24132194 | None:intergenic | 20.0% |
| !! | AATGAATTTCATATTCCTTA+TGG | - | chr7_4:24132176-24132195 | None:intergenic | 20.0% |
| !! | TACAATTACTTTACTTATTG+CGG | - | chr7_4:24132708-24132727 | None:intergenic | 20.0% |
| !!! | ACATTTTGATTTATTCTCAT+TGG | + | chr7_4:24132727-24132746 | Msa1146470:intron | 20.0% |
| !!! | AATTATATTTTCTCAATGTG+GGG | - | chr7_4:24132890-24132909 | None:intergenic | 20.0% |
| !!! | GAATTATATTTTCTCAATGT+GGG | - | chr7_4:24132891-24132910 | None:intergenic | 20.0% |
| !!! | AGAATTATATTTTCTCAATG+TGG | - | chr7_4:24132892-24132911 | None:intergenic | 20.0% |
| !! | ATTGCATTATTTGAATACAA+TGG | + | chr7_4:24133028-24133047 | Msa1146470:intron | 20.0% |
| !! | TGCATAATTACTATCTTAAA+AGG | - | chr7_4:24133475-24133494 | None:intergenic | 20.0% |
| !!! | AAAATCACATTTTAATCACA+TGG | + | chr7_4:24133659-24133678 | Msa1146470:intron | 20.0% |
| !! | CTAAATTTACAACAATCTTA+AGG | - | chr7_4:24134172-24134191 | None:intergenic | 20.0% |
| !! | CTTAAGATTGTTGTAAATTT+AGG | + | chr7_4:24134170-24134189 | Msa1146470:intron | 20.0% |
| !! | AATTCAATGCCTATAAAAAA+GGG | - | chr7_4:24131454-24131473 | None:intergenic | 20.0% |
| !!! | ATTAGTTGTTGTTATTTACT+TGG | - | chr7_4:24131599-24131618 | None:intergenic | 20.0% |
| !! | AATAACAACAACTAATAATG+TGG | + | chr7_4:24131603-24131622 | Msa1146470:intron | 20.0% |
| ! | TAAGTATGATCTTGAAAAAG+TGG | - | chr7_4:24128411-24128430 | None:intergenic | 25.0% |
| ! | TTTGTTTGTTTGAAGAAAAC+AGG | + | chr7_4:24128531-24128550 | Msa1146470:intron | 25.0% |
| ! | CATATGACGTAATATATGAA+GGG | + | chr7_4:24128596-24128615 | Msa1146470:intron | 25.0% |
| ! | TAAATTAATAATGTTGGGAC+CGG | + | chr7_4:24128708-24128727 | Msa1146470:intron | 25.0% |
| !! | GAAGATCCCTTTATAATTTT+CGG | - | chr7_4:24129042-24129061 | None:intergenic | 25.0% |
| !!! | TGGGATTTTTTTTTTCTTGT+TGG | + | chr7_4:24129227-24129246 | Msa1146470:intron | 25.0% |
| !!! | GGGATTTTTTTTTTCTTGTT+GGG | + | chr7_4:24129228-24129247 | Msa1146470:intron | 25.0% |
| !!! | GGATTTTTTTTTTCTTGTTG+GGG | + | chr7_4:24129229-24129248 | Msa1146470:intron | 25.0% |
| !!! | CGATTCGGTAAAAATTAAAT+TGG | + | chr7_4:24129417-24129436 | Msa1146470:intron | 25.0% |
| ! | TTGTGCTGTAAAAAAAGATA+TGG | - | chr7_4:24129844-24129863 | None:intergenic | 25.0% |
| !! | ATTTGGAGTCTTTAGATATA+TGG | - | chr7_4:24129996-24130015 | None:intergenic | 25.0% |
| ! | ATATATCTAAAGACTCCAAA+TGG | + | chr7_4:24129995-24130014 | Msa1146470:CDS | 25.0% |
| ! | TGCAAAATGGACATTAAATT+TGG | + | chr7_4:24130018-24130037 | Msa1146470:CDS | 25.0% |
| ! | AAAAACGTGCACATAAAAAT+GGG | - | chr7_4:24130149-24130168 | None:intergenic | 25.0% |
| !!! | TCATTCGTGTTCTTTAAAAT+TGG | - | chr7_4:24130798-24130817 | None:intergenic | 25.0% |
| ! | CCTTGATTCTATATCAAAAA+GGG | - | chr7_4:24131300-24131319 | None:intergenic | 25.0% |
| ! | TCCTTGATTCTATATCAAAA+AGG | - | chr7_4:24131301-24131320 | None:intergenic | 25.0% |
| ! | TATAAAAAAGGGTAAGAAAC+CGG | - | chr7_4:24131443-24131462 | None:intergenic | 25.0% |
| ! | CAATTCAATGCCTATAAAAA+AGG | - | chr7_4:24131455-24131474 | None:intergenic | 25.0% |
| ! | AATAAAAACGGTAAAACAGT+AGG | + | chr7_4:24131509-24131528 | Msa1146470:intron | 25.0% |
| !!! | TGTAACGTTAATTTTTGGAT+TGG | + | chr7_4:24131551-24131570 | Msa1146470:intron | 25.0% |
| ! | TTTAATTCCCAATTTGGTAA+CGG | - | chr7_4:24131636-24131655 | None:intergenic | 25.0% |
| ! | GTGTTAAGTATTATCATTCT+AGG | - | chr7_4:24131911-24131930 | None:intergenic | 25.0% |
| ! | ACTCGAAATTAATAAGTGAT+GGG | - | chr7_4:24132384-24132403 | None:intergenic | 25.0% |
| ! | AATAAATTTGTGTACATCGA+GGG | - | chr7_4:24132423-24132442 | None:intergenic | 25.0% |
| ! | AAATAAATTTGTGTACATCG+AGG | - | chr7_4:24132424-24132443 | None:intergenic | 25.0% |
| ! | ACAAATTTATTTCATCCCAA+GGG | + | chr7_4:24132432-24132451 | Msa1146470:intron | 25.0% |
| ! | TAGTCAATCTTATATGATGA+AGG | - | chr7_4:24132502-24132521 | None:intergenic | 25.0% |
| ! | ACAATTACTTTACTTATTGC+GGG | - | chr7_4:24132707-24132726 | None:intergenic | 25.0% |
| !!! | ATTGCATTATTTTGATGCAA+TGG | + | chr7_4:24132771-24132790 | Msa1146470:intron | 25.0% |
| !! | ATTATATTTTCTCAATGTGG+GGG | - | chr7_4:24132889-24132908 | None:intergenic | 25.0% |
| !!! | TCGAATTTATTTTCCATTGT+TGG | - | chr7_4:24132968-24132987 | None:intergenic | 25.0% |
| ! | TTCAATAAAAGAGTTAGTTG+AGG | - | chr7_4:24133148-24133167 | None:intergenic | 25.0% |
| ! | AAATAGTATCATTAGAGAGA+AGG | + | chr7_4:24133233-24133252 | Msa1146470:intron | 25.0% |
| ! | TAACGTTGAAATATCAAATG+AGG | - | chr7_4:24133451-24133470 | None:intergenic | 25.0% |
| !! | TTTTCATGATGTTATCTTTG+TGG | - | chr7_4:24133528-24133547 | None:intergenic | 25.0% |
| ! | ACATGAATATTGTAGAATTG+TGG | - | chr7_4:24133603-24133622 | None:intergenic | 25.0% |
| ! | TATAAAAAAGGGTAAGAAAC+CGG | - | chr7_4:24131443-24131462 | None:intergenic | 25.0% |
| ! | CAATTCAATGCCTATAAAAA+AGG | - | chr7_4:24131455-24131474 | None:intergenic | 25.0% |
| ! | AATAAAAACGGTAAAACAGT+AGG | + | chr7_4:24131509-24131528 | Msa1146470:intron | 25.0% |
| !!! | TGTAACGTTAATTTTTGGAT+TGG | + | chr7_4:24131551-24131570 | Msa1146470:intron | 25.0% |
| ! | TTTAATTCCCAATTTGGTAA+CGG | - | chr7_4:24131636-24131655 | None:intergenic | 25.0% |
| !! | ACATTTTCCTTTTCTTTTGT+TGG | + | chr7_4:24135162-24135181 | Msa1146470:intron | 25.0% |
| CCTTCATATATTACGTCATA+TGG | - | chr7_4:24128598-24128617 | None:intergenic | 30.0% | |
| CCATATGACGTAATATATGA+AGG | + | chr7_4:24128595-24128614 | Msa1146470:intron | 30.0% | |
| TAATGTGTTCATCTGTTAGA+TGG | - | chr7_4:24128642-24128661 | None:intergenic | 30.0% | |
| GTACAGTAAATGTAAACAAG+AGG | + | chr7_4:24128940-24128959 | Msa1146470:intron | 30.0% | |
| TTGGGACCGAAAATTATAAA+GGG | + | chr7_4:24129033-24129052 | Msa1146470:intron | 30.0% | |
| TAAACACAAAACTGACAGAT+TGG | + | chr7_4:24129207-24129226 | Msa1146470:intron | 30.0% | |
| AAACACAAAACTGACAGATT+GGG | + | chr7_4:24129208-24129227 | Msa1146470:intron | 30.0% | |
| ! | TTTTCTTGTTGGGGTTTATA+AGG | + | chr7_4:24129238-24129257 | Msa1146470:intron | 30.0% |
| AATCGAGCATAACTTAATCT+CGG | - | chr7_4:24129402-24129421 | None:intergenic | 30.0% | |
| AGATTAAGTTATGCTCGATT+CGG | + | chr7_4:24129402-24129421 | Msa1146470:intron | 30.0% | |
| TAACAATTGAATCATGCGAT+AGG | + | chr7_4:24129612-24129631 | Msa1146470:intron | 30.0% | |
| TAAACAATTGAGAGCTAGAT+TGG | - | chr7_4:24129711-24129730 | None:intergenic | 30.0% | |
| TTGTTTAAAAAATACCGTCG+TGG | + | chr7_4:24129724-24129743 | Msa1146470:intron | 30.0% | |
| TGTTTAAAAAATACCGTCGT+GGG | + | chr7_4:24129725-24129744 | Msa1146470:intron | 30.0% | |
| ATTCTCATATAGTGGTTTCA+TGG | + | chr7_4:24129751-24129770 | Msa1146470:intron | 30.0% | |
| !!! | TCGTATCTCTTTTAGTTTGA+AGG | + | chr7_4:24129818-24129837 | Msa1146470:intron | 30.0% |
| TTCTATCACGAGTACTAATT+TGG | + | chr7_4:24129905-24129924 | Msa1146470:intron | 30.0% | |
| TATTTCTCCACAAACTTTCT+TGG | - | chr7_4:24129953-24129972 | None:intergenic | 30.0% | |
| AGAAAGTTTGTGGAGAAATA+TGG | + | chr7_4:24129953-24129972 | Msa1146470:CDS | 30.0% | |
| TAAAAAGTGATGGCAAGATA+TGG | + | chr7_4:24130041-24130060 | Msa1146470:CDS | 30.0% | |
| CATATTTGAAAAGCAGAAGA+TGG | - | chr7_4:24130117-24130136 | None:intergenic | 30.0% | |
| CAAAAACGTGCACATAAAAA+TGG | - | chr7_4:24130150-24130169 | None:intergenic | 30.0% | |
| ! | GTTGATGAAATTCAAATGAG+GGG | - | chr7_4:24130297-24130316 | None:intergenic | 30.0% |
| !! | GGTTGATGAAATTCAAATGA+GGG | - | chr7_4:24130298-24130317 | None:intergenic | 30.0% |
| !! | TGGTTGATGAAATTCAAATG+AGG | - | chr7_4:24130299-24130318 | None:intergenic | 30.0% |
| ! | CATACTCAAAAAAAGTGCAA+AGG | + | chr7_4:24130379-24130398 | Msa1146470:intron | 30.0% |
| TAGTATTTAGTTATAGGGTG+AGG | + | chr7_4:24130524-24130543 | Msa1146470:intron | 30.0% | |
| AGTATTTAGTTATAGGGTGA+GGG | + | chr7_4:24130525-24130544 | Msa1146470:intron | 30.0% | |
| TGCAAAATTGGAACATCATA+AGG | - | chr7_4:24130838-24130857 | None:intergenic | 30.0% | |
| ! | TTATGATGTTCCAATTTTGC+AGG | + | chr7_4:24130837-24130856 | Msa1146470:intron | 30.0% |
| ! | TATGATGTTCCAATTTTGCA+GGG | + | chr7_4:24130838-24130857 | Msa1146470:intron | 30.0% |
| !!! | ATGTTTTGAAAGAGTTTGCT+TGG | - | chr7_4:24130902-24130921 | None:intergenic | 30.0% |
| GTAAGCTACAAAGAATCATT+TGG | + | chr7_4:24130981-24131000 | Msa1146470:intron | 30.0% | |
| GTAGAGCATGTTGTAAATTT+AGG | + | chr7_4:24131007-24131026 | Msa1146470:intron | 30.0% | |
| !! | GCTGTTGATTCTATTTGATT+TGG | - | chr7_4:24131177-24131196 | None:intergenic | 30.0% |
| AATTACGCGAAAAATCCTTA+AGG | - | chr7_4:24131249-24131268 | None:intergenic | 30.0% | |
| ! | CCCTTTTTGATATAGAATCA+AGG | + | chr7_4:24131297-24131316 | Msa1146470:intron | 30.0% |
| !! | TCGCAAGAAGAAATTTTAAC+AGG | + | chr7_4:24131329-24131348 | Msa1146470:intron | 30.0% |
| TCCATTAGATTGAGTTTCTT+GGG | - | chr7_4:24131364-24131383 | None:intergenic | 30.0% | |
| !!! | GGTTTCTTACCCTTTTTTAT+AGG | + | chr7_4:24131442-24131461 | Msa1146470:intron | 30.0% |
| TGATACACATGTTAGTTATG+TGG | + | chr7_4:24131473-24131492 | Msa1146470:intron | 30.0% | |
| AAAATTAACGTTACACTACC+TGG | - | chr7_4:24131546-24131565 | None:intergenic | 30.0% | |
| ! | GGTAGTGTAACGTTAATTTT+TGG | + | chr7_4:24131546-24131565 | Msa1146470:intron | 30.0% |
| ACAACTAATAATGTGGTCAA+AGG | + | chr7_4:24131610-24131629 | Msa1146470:intron | 30.0% | |
| !! | CACGTTTTTAATTCCCAATT+TGG | - | chr7_4:24131642-24131661 | None:intergenic | 30.0% |
| CTATATGAACCAAAATCACT+TGG | + | chr7_4:24131953-24131972 | Msa1146470:intron | 30.0% | |
| AATTTCATATTCCTTATGGG+TGG | - | chr7_4:24132172-24132191 | None:intergenic | 30.0% | |
| CACTCGAAATTAATAAGTGA+TGG | - | chr7_4:24132385-24132404 | None:intergenic | 30.0% | |
| CATCACTTATTAATTTCGAG+TGG | + | chr7_4:24132383-24132402 | Msa1146470:intron | 30.0% | |
| ! | TTATTAATTTCGAGTGGCTT+AGG | + | chr7_4:24132389-24132408 | Msa1146470:intron | 30.0% |
| ATAAATTTGTGTACATCGAG+GGG | - | chr7_4:24132422-24132441 | None:intergenic | 30.0% | |
| CACAAATTTATTTCATCCCA+AGG | + | chr7_4:24132431-24132450 | Msa1146470:intron | 30.0% | |
| CAAATTTATTTCATCCCAAG+GGG | + | chr7_4:24132433-24132452 | Msa1146470:intron | 30.0% | |
| !! | ATTGATAGTGATGTCACTTA+AGG | - | chr7_4:24132614-24132633 | None:intergenic | 30.0% |
| CAATTACTTTACTTATTGCG+GGG | - | chr7_4:24132706-24132725 | None:intergenic | 30.0% | |
| CATTCTTGATATACTTCATC+AGG | + | chr7_4:24132835-24132854 | Msa1146470:intron | 30.0% | |
| ATAGAAGTAATCAAACTGTG+AGG | + | chr7_4:24133188-24133207 | Msa1146470:intron | 30.0% | |
| CTATGAGATTATGTGCATAT+TGG | - | chr7_4:24133283-24133302 | None:intergenic | 30.0% | |
| ! | TAGTTTGAATGTGCATGTTT+TGG | - | chr7_4:24133363-24133382 | None:intergenic | 30.0% |
| TTTGTTTGTCGTACGTATAT+CGG | - | chr7_4:24133696-24133715 | None:intergenic | 30.0% | |
| ATAGAAACATTTGTGACAGT+GGG | + | chr7_4:24133722-24133741 | Msa1146470:intron | 30.0% | |
| !!! | GAAGGTTTAGCACAATTTTT+TGG | + | chr7_4:24133749-24133768 | Msa1146470:intron | 30.0% |
| !!! | AATTTTTTGGCAATGAGGAA+TGG | + | chr7_4:24133762-24133781 | Msa1146470:intron | 30.0% |
| GATACGTAAGTCACAAATAA+AGG | + | chr7_4:24133784-24133803 | Msa1146470:intron | 30.0% | |
| GTGATATAACAAAGCGTAAT+AGG | + | chr7_4:24133814-24133833 | Msa1146470:intron | 30.0% | |
| TAATTATTGTTACCTGGTTC+CGG | + | chr7_4:24133847-24133866 | Msa1146470:intron | 30.0% | |
| !! | ACTGAATTTTGGTAGATAAC+CGG | - | chr7_4:24133869-24133888 | None:intergenic | 30.0% |
| ! | GGTAAGCTTATACTGAATTT+TGG | - | chr7_4:24133880-24133899 | None:intergenic | 30.0% |
| AGCAACCTAATCAATTTCAT+TGG | + | chr7_4:24133926-24133945 | Msa1146470:intron | 30.0% | |
| GCAACCTAATCAATTTCATT+GGG | + | chr7_4:24133927-24133946 | Msa1146470:intron | 30.0% | |
| !! | CTTTGAGACATGAAAGATAA+TGG | - | chr7_4:24133960-24133979 | None:intergenic | 30.0% |
| ATTAGATGGTGTGAGATTAT+TGG | - | chr7_4:24134068-24134087 | None:intergenic | 30.0% | |
| TCAAAGACCACAAAATTAGA+TGG | - | chr7_4:24134082-24134101 | None:intergenic | 30.0% | |
| TCTTTGATTAAAACCTATCG+CGG | + | chr7_4:24134095-24134114 | Msa1146470:intron | 30.0% | |
| !! | GCTGTTGATTCTATTTGATT+TGG | - | chr7_4:24131177-24131196 | None:intergenic | 30.0% |
| AATTACGCGAAAAATCCTTA+AGG | - | chr7_4:24131249-24131268 | None:intergenic | 30.0% | |
| CCTTGATTCTATATCAAGAA+GGG | - | chr7_4:24134463-24134482 | None:intergenic | 30.0% | |
| TCCTTGATTCTATATCAAGA+AGG | - | chr7_4:24134464-24134483 | None:intergenic | 30.0% | |
| !! | TCGCAAGAAGAAATTTTAAC+AGG | + | chr7_4:24131329-24131348 | Msa1146470:intron | 30.0% |
| TCCATTAGATTGAGTTTCTT+GGG | - | chr7_4:24131364-24131383 | None:intergenic | 30.0% | |
| !!! | GGTTTCTTACCCTTTTTTAT+AGG | + | chr7_4:24131442-24131461 | Msa1146470:intron | 30.0% |
| TGATACACATGTTAGTTATG+TGG | + | chr7_4:24131473-24131492 | Msa1146470:intron | 30.0% | |
| AAAATTAACGTTACACTACC+TGG | - | chr7_4:24131546-24131565 | None:intergenic | 30.0% | |
| ! | GGTAGTGTAACGTTAATTTT+TGG | + | chr7_4:24131546-24131565 | Msa1146470:intron | 30.0% |
| ACAACTAATAATGTGGTCAA+AGG | + | chr7_4:24131610-24131629 | Msa1146470:intron | 30.0% | |
| !! | CACGTTTTTAATTCCCAATT+TGG | - | chr7_4:24131642-24131661 | None:intergenic | 30.0% |
| !!! | TGCTTGTTGATTTTAGTTAG+TGG | - | chr7_4:24135045-24135064 | None:intergenic | 30.0% |
| TATTCTGCCAACAAAAGAAA+AGG | - | chr7_4:24135172-24135191 | None:intergenic | 30.0% | |
| CAGAATATACCAGTTAAGTT+TGG | + | chr7_4:24135185-24135204 | Msa1146470:intron | 30.0% | |
| !! | TTTGATTTGGAAAAGAAGAG+AGG | + | chr7_4:24135218-24135237 | Msa1146470:CDS | 30.0% |
| !!! | GTTTATTTTGAGGTGTTAGA+TGG | + | chr7_4:24135245-24135264 | Msa1146470:CDS | 30.0% |
| CTTACTCACAACATTCATGA+AGG | + | chr7_4:24128427-24128446 | Msa1146470:CDS | 35.0% | |
| ACTACTGTGTTCATATGCAT+TGG | + | chr7_4:24128896-24128915 | Msa1146470:intron | 35.0% | |
| CTTGGGACCGAAAATTATAA+AGG | + | chr7_4:24129032-24129051 | Msa1146470:intron | 35.0% | |
| ATAATAAATTTGTCCGGTCC+CGG | - | chr7_4:24129123-24129142 | None:intergenic | 35.0% | |
| TATGAGCAACATACAAGTAG+TGG | + | chr7_4:24129275-24129294 | Msa1146470:intron | 35.0% | |
| TTACCTTATCCTCTTAGGTT+GGG | + | chr7_4:24129343-24129362 | Msa1146470:intron | 35.0% | |
| AGCTCACAAACAATTCGATT+CGG | + | chr7_4:24129490-24129509 | Msa1146470:intron | 35.0% | |
| GTTAAAAGTCTCACATCGTT+TGG | + | chr7_4:24129882-24129901 | Msa1146470:intron | 35.0% | |
| TTTGTGGAGAAATATGGAGA+AGG | + | chr7_4:24129959-24129978 | Msa1146470:CDS | 35.0% | |
| ! | AATGTCCATTTTGCACCATT+TGG | - | chr7_4:24130013-24130032 | None:intergenic | 35.0% |
| TGGCAAGATATGGTTTGAAA+AGG | + | chr7_4:24130051-24130070 | Msa1146470:CDS | 35.0% | |
| GGCAAGATATGGTTTGAAAA+GGG | + | chr7_4:24130052-24130071 | Msa1146470:CDS | 35.0% | |
| AGATATGGTTTGAAAAGGGT+TGG | + | chr7_4:24130056-24130075 | Msa1146470:CDS | 35.0% | |
| GGAAGGATAACTTATCTCTA+AGG | - | chr7_4:24130182-24130201 | None:intergenic | 35.0% | |
| CACAAGAGTTGAAGCTAAAA+GGG | + | chr7_4:24130201-24130220 | Msa1146470:CDS | 35.0% | |
| TTTCATCAACCACGTGAAAT+AGG | + | chr7_4:24130307-24130326 | Msa1146470:CDS | 35.0% | |
| AGCAGTAGTTGTGTTAAAGT+TGG | + | chr7_4:24130331-24130350 | Msa1146470:CDS | 35.0% | |
| GCAGTAGTTGTGTTAAAGTT+GGG | + | chr7_4:24130332-24130351 | Msa1146470:CDS | 35.0% | |
| TAAAGTTGGGCAATCAGAAA+AGG | + | chr7_4:24130345-24130364 | Msa1146470:CDS | 35.0% | |
| GTATTTAGTTATAGGGTGAG+GGG | + | chr7_4:24130526-24130545 | Msa1146470:intron | 35.0% | |
| AAGAGTTGTAACGTTCTCAT+TGG | - | chr7_4:24130877-24130896 | None:intergenic | 35.0% | |
| TCCATCGTTTATTCTTGTCA+TGG | + | chr7_4:24130926-24130945 | Msa1146470:intron | 35.0% | |
| CCATCGTTTATTCTTGTCAT+GGG | + | chr7_4:24130927-24130946 | Msa1146470:intron | 35.0% | |
| CATCGTTTATTCTTGTCATG+GGG | + | chr7_4:24130928-24130947 | Msa1146470:intron | 35.0% | |
| ATCGTTTATTCTTGTCATGG+GGG | + | chr7_4:24130929-24130948 | Msa1146470:intron | 35.0% | |
| ! | CAAAGATGTTGATAAAGTCG+TGG | - | chr7_4:24131150-24131169 | None:intergenic | 35.0% |
| AAAAGGGTCTGTTAAATCCT+GGG | - | chr7_4:24131284-24131303 | None:intergenic | 35.0% | |
| AAAAAGGGTCTGTTAAATCC+TGG | - | chr7_4:24131285-24131304 | None:intergenic | 35.0% | |
| ACCCAAGAAACTCAATCTAA+TGG | + | chr7_4:24131360-24131379 | Msa1146470:intron | 35.0% | |
| CTCCATTAGATTGAGTTTCT+TGG | - | chr7_4:24131365-24131384 | None:intergenic | 35.0% | |
| CAAGAAACTCAATCTAATGG+AGG | + | chr7_4:24131363-24131382 | Msa1146470:intron | 35.0% | |
| !! | AAGTATTATCATTCTAGGGC+TGG | - | chr7_4:24131906-24131925 | None:intergenic | 35.0% |
| TACTTAACACACAGTGAAGT+TGG | + | chr7_4:24131921-24131940 | Msa1146470:intron | 35.0% | |
| ! | TAACATACGCCAAGTGATTT+TGG | - | chr7_4:24131965-24131984 | None:intergenic | 35.0% |
| ACCCATATGAACCTTATTCA+TGG | + | chr7_4:24132333-24132352 | Msa1146470:intron | 35.0% | |
| CCCATGAATAAGGTTCATAT+GGG | - | chr7_4:24132337-24132356 | None:intergenic | 35.0% | |
| CCCATATGAACCTTATTCAT+GGG | + | chr7_4:24132334-24132353 | Msa1146470:intron | 35.0% | |
| TCCCATGAATAAGGTTCATA+TGG | - | chr7_4:24132338-24132357 | None:intergenic | 35.0% | |
| AAGTGACATCACTATCAATG+TGG | + | chr7_4:24132615-24132634 | Msa1146470:intron | 35.0% | |
| !! | TCTTGTGCTGCTAATGTTTT+TGG | - | chr7_4:24133639-24133658 | None:intergenic | 35.0% |
| CATAGAAACATTTGTGACAG+TGG | + | chr7_4:24133721-24133740 | Msa1146470:intron | 35.0% | |
| !!! | AGCACAATTTTTTGGCAATG+AGG | + | chr7_4:24133757-24133776 | Msa1146470:intron | 35.0% |
| !! | CATTGATGATGACAATAGGA+AGG | - | chr7_4:24133901-24133920 | None:intergenic | 35.0% |
| CTTCCTATTGTCATCATCAA+TGG | + | chr7_4:24133899-24133918 | Msa1146470:intron | 35.0% | |
| !! | AAGCCATTGATGATGACAAT+AGG | - | chr7_4:24133905-24133924 | None:intergenic | 35.0% |
| GCTTCCCAATGAAATTGATT+AGG | - | chr7_4:24133934-24133953 | None:intergenic | 35.0% | |
| ! | TGGTGTGAGATTATTGGTTA+TGG | - | chr7_4:24134062-24134081 | None:intergenic | 35.0% |
| ! | TCTCACACCATCTAATTTTG+TGG | + | chr7_4:24134072-24134091 | Msa1146470:intron | 35.0% |
| ! | CAAAGATGTTGATAAAGTCG+TGG | - | chr7_4:24131150-24131169 | None:intergenic | 35.0% |
| CCCTTCTTGATATAGAATCA+AGG | + | chr7_4:24134460-24134479 | Msa1146470:intron | 35.0% | |
| ACCCAAGAAACTCAATCTAA+TGG | + | chr7_4:24131360-24131379 | Msa1146470:intron | 35.0% | |
| CTCCATTAGATTGAGTTTCT+TGG | - | chr7_4:24131365-24131384 | None:intergenic | 35.0% | |
| CAAGAAACTCAATCTAATGG+AGG | + | chr7_4:24131363-24131382 | Msa1146470:intron | 35.0% | |
| TAAAGTCGTACCAACTATGT+TGG | + | chr7_4:24135017-24135036 | Msa1146470:intron | 35.0% | |
| TGTGTCTTACCAAACTTAAC+TGG | - | chr7_4:24135197-24135216 | None:intergenic | 35.0% | |
| TGGTAAGACACACTTTGATT+TGG | + | chr7_4:24135205-24135224 | Msa1146470:CDS | 35.0% | |
| !!! | GAGAGGAGTTGTTTATTTTG+AGG | + | chr7_4:24135235-24135254 | Msa1146470:CDS | 35.0% |
| TTCCTCTTTATGTATCTTGC+AGG | - | chr7_4:24135281-24135300 | None:intergenic | 35.0% | |
| CTAATTTACGTTGAGTCCCA+AGG | - | chr7_4:24128874-24128893 | None:intergenic | 40.0% | |
| !!! | TTTTTTACATTGGCCCAAGC+CGG | + | chr7_4:24129101-24129120 | Msa1146470:intron | 40.0% |
| CATACAAGTAGTGGCGAAAA+AGG | + | chr7_4:24129284-24129303 | Msa1146470:intron | 40.0% | |
| CTACCTTACCTTATCCTCTT+AGG | + | chr7_4:24129338-24129357 | Msa1146470:intron | 40.0% | |
| CAACCTAAGAGGATAAGGTA+AGG | - | chr7_4:24129344-24129363 | None:intergenic | 40.0% | |
| CTTACCTTATCCTCTTAGGT+TGG | + | chr7_4:24129342-24129361 | Msa1146470:intron | 40.0% | |
| CGATAGGCTGAGAACAAATT+TGG | + | chr7_4:24129628-24129647 | Msa1146470:intron | 40.0% | |
| ! | TGGTCTTAAGACCAAGTAAC+AGG | + | chr7_4:24129648-24129667 | Msa1146470:intron | 40.0% |
| ATATGAGAATAGTCCCACGA+CGG | - | chr7_4:24129741-24129760 | None:intergenic | 40.0% | |
| GTGGGACTATTCTCATATAG+TGG | + | chr7_4:24129743-24129762 | Msa1146470:intron | 40.0% | |
| GATGATGCCAAGAAAGTTTG+TGG | + | chr7_4:24129943-24129962 | Msa1146470:intron | 40.0% | |
| AGACTCCAAATGGTGCAAAA+TGG | + | chr7_4:24130005-24130024 | Msa1146470:CDS | 40.0% | |
| TTAGCTTCAACTCTTGTGGA+AGG | - | chr7_4:24130199-24130218 | None:intergenic | 40.0% | |
| !!! | CCTTTTAGCTTCAACTCTTG+TGG | - | chr7_4:24130203-24130222 | None:intergenic | 40.0% |
| CCACAAGAGTTGAAGCTAAA+AGG | + | chr7_4:24130200-24130219 | Msa1146470:CDS | 40.0% | |
| CTAGTAAGTCCGTGTGTAAT+CGG | + | chr7_4:24130492-24130511 | Msa1146470:intron | 40.0% | |
| AACTTCTCTCCCTGCAAAAT+TGG | - | chr7_4:24130850-24130869 | None:intergenic | 40.0% | |
| CCCATGACAAGAATAAACGA+TGG | - | chr7_4:24130930-24130949 | None:intergenic | 40.0% | |
| ! | TGTTGATAAAGTCGTGGTCA+GGG | - | chr7_4:24131144-24131163 | None:intergenic | 40.0% |
| ! | ATGTTGATAAAGTCGTGGTC+AGG | - | chr7_4:24131145-24131164 | None:intergenic | 40.0% |
| AAAGGGTCTGTTAAATCCTG+GGG | - | chr7_4:24131283-24131302 | None:intergenic | 40.0% | |
| AACTCAATCTAATGGAGGAG+AGG | + | chr7_4:24131368-24131387 | Msa1146470:intron | 40.0% | |
| TCAAAGGCCGTTACCAAATT+GGG | + | chr7_4:24131626-24131645 | Msa1146470:intron | 40.0% | |
| CAGTTTGATGCATCACATCT+AGG | - | chr7_4:24131864-24131883 | None:intergenic | 40.0% | |
| CTAGATGTGATGCATCAAAC+TGG | + | chr7_4:24131862-24131881 | Msa1146470:intron | 40.0% | |
| AATCACTTGGCGTATGTTAG+CGG | + | chr7_4:24131966-24131985 | Msa1146470:intron | 40.0% | |
| GAGCACTCATGAAATAATCC+AGG | - | chr7_4:24132063-24132082 | None:intergenic | 40.0% | |
| CAAATCATACACCACCCATA+AGG | + | chr7_4:24132158-24132177 | Msa1146470:intron | 40.0% | |
| GATTGGAGATCCCATGAATA+AGG | - | chr7_4:24132347-24132366 | None:intergenic | 40.0% | |
| AAGTGACAACACTCCAACAA+TGG | + | chr7_4:24132952-24132971 | Msa1146470:intron | 40.0% | |
| AGAATTGTGGCTATACTTGC+AGG | - | chr7_4:24133590-24133609 | None:intergenic | 40.0% | |
| TCAAGGCAGAATTTGATCGA+TGG | - | chr7_4:24133986-24134005 | None:intergenic | 40.0% | |
| CGATCAAATTCTGCCTTGAT+TGG | + | chr7_4:24133987-24134006 | Msa1146470:intron | 40.0% | |
| TTGATTAAAACCTATCGCGG+TGG | + | chr7_4:24134098-24134117 | Msa1146470:intron | 40.0% | |
| ! | TGTTGATAAAGTCGTGGTCA+GGG | - | chr7_4:24131144-24131163 | None:intergenic | 40.0% |
| ! | ATGTTGATAAAGTCGTGGTC+AGG | - | chr7_4:24131145-24131164 | None:intergenic | 40.0% |
| AGAAGGGTCTGTTAAATCCT+GGG | - | chr7_4:24134447-24134466 | None:intergenic | 40.0% | |
| AAGAAGGGTCTGTTAAATCC+TGG | - | chr7_4:24134448-24134467 | None:intergenic | 40.0% | |
| AACTCAATCTAATGGAGGAG+AGG | + | chr7_4:24131368-24131387 | Msa1146470:intron | 40.0% | |
| TCAAAGGCCGTTACCAAATT+GGG | + | chr7_4:24131626-24131645 | Msa1146470:intron | 40.0% | |
| AGGTGTTAGATGGAAGAGTT+TGG | + | chr7_4:24135255-24135274 | Msa1146470:CDS | 40.0% | |
| CTTCACCTCAGGAATTTCAC+TGG | - | chr7_4:24128383-24128402 | None:intergenic | 45.0% | |
| !! | AAGTGGATTGACTTCACCTC+AGG | - | chr7_4:24128394-24128413 | None:intergenic | 45.0% |
| AATTACGTTGCAGCGAACCT+TGG | + | chr7_4:24128854-24128873 | Msa1146470:intron | 45.0% | |
| ATTACGTTGCAGCGAACCTT+GGG | + | chr7_4:24128855-24128874 | Msa1146470:intron | 45.0% | |
| ! | TTTTTACATTGGCCCAAGCC+GGG | + | chr7_4:24129102-24129121 | Msa1146470:intron | 45.0% |
| AAGCCCAACCTAAGAGGATA+AGG | - | chr7_4:24129349-24129368 | None:intergenic | 45.0% | |
| !! | TATCCTCTTAGGTTGGGCTT+AGG | + | chr7_4:24129349-24129368 | Msa1146470:intron | 45.0% |
| !! | ATCCTCTTAGGTTGGGCTTA+GGG | + | chr7_4:24129350-24129369 | Msa1146470:intron | 45.0% |
| CCAATGCATTGCCTGTTACT+TGG | - | chr7_4:24129662-24129681 | None:intergenic | 45.0% | |
| CCAAGTAACAGGCAATGCAT+TGG | + | chr7_4:24129659-24129678 | Msa1146470:intron | 45.0% | |
| GAAGCTAAAAGGGTCTCGAA+TGG | + | chr7_4:24130211-24130230 | Msa1146470:CDS | 45.0% | |
| GCTCTACAATCGTCGTTATC+TGG | - | chr7_4:24130253-24130272 | None:intergenic | 45.0% | |
| CTACTGCTTCCTATTTCACG+TGG | - | chr7_4:24130319-24130338 | None:intergenic | 45.0% | |
| ! | AAACGTCTGCCGATTACACA+CGG | - | chr7_4:24130504-24130523 | None:intergenic | 45.0% |
| AGCTTACCAGAAGAAAACGC+CGG | - | chr7_4:24130968-24130987 | None:intergenic | 45.0% | |
| TAATTATACGCTAACCCCCC+AGG | + | chr7_4:24131264-24131283 | Msa1146470:intron | 45.0% | |
| AAGGGTCTGTTAAATCCTGG+GGG | - | chr7_4:24131282-24131301 | None:intergenic | 45.0% | |
| ACTCAGCTTGTGTACTGTAC+CGG | + | chr7_4:24131421-24131440 | Msa1146470:intron | 45.0% | |
| CAGTAGGAGTGATATTGACC+AGG | + | chr7_4:24131525-24131544 | Msa1146470:intron | 45.0% | |
| GTCAAAGGCCGTTACCAAAT+TGG | + | chr7_4:24131625-24131644 | Msa1146470:intron | 45.0% | |
| TGAGATCTTGGCGATATCTC+TGG | - | chr7_4:24132085-24132104 | None:intergenic | 45.0% | |
| TCGCCAAGATCTCATACAAG+CGG | + | chr7_4:24132091-24132110 | Msa1146470:intron | 45.0% | |
| ACCTATGTGAGTGTCAAGTG+AGG | - | chr7_4:24132117-24132136 | None:intergenic | 45.0% | |
| CTAGACACTGCATTACTGAG+AGG | - | chr7_4:24132218-24132237 | None:intergenic | 45.0% | |
| TCTCACACACACCATAGGAA+AGG | + | chr7_4:24132242-24132261 | Msa1146470:intron | 45.0% | |
| CTCACACACACCATAGGAAA+GGG | + | chr7_4:24132243-24132262 | Msa1146470:intron | 45.0% | |
| TTGTTTCCGTCCCTTTCCTA+TGG | - | chr7_4:24132256-24132275 | None:intergenic | 45.0% | |
| TTGTGTACATCGAGGGGATT+GGG | - | chr7_4:24132416-24132435 | None:intergenic | 45.0% | |
| TTTGTGTACATCGAGGGGAT+TGG | - | chr7_4:24132417-24132436 | None:intergenic | 45.0% | |
| GCTACTAAACAAAGCCCCTT+GGG | - | chr7_4:24132450-24132469 | None:intergenic | 45.0% | |
| AGCTACTAAACAAAGCCCCT+TGG | - | chr7_4:24132451-24132470 | None:intergenic | 45.0% | |
| TTTGTGACAGTGGGATCAGA+AGG | + | chr7_4:24133731-24133750 | Msa1146470:intron | 45.0% | |
| TTTGGTAGATAACCGGAACC+AGG | - | chr7_4:24133862-24133881 | None:intergenic | 45.0% | |
| TGGTCGCATTTGTCATGTCT+TGG | - | chr7_4:24134024-24134043 | None:intergenic | 45.0% | |
| AAATGCGACCAATCACTTCG+TGG | + | chr7_4:24134033-24134052 | Msa1146470:intron | 45.0% | |
| TATGGTGTCCACGAAGTGAT+TGG | - | chr7_4:24134044-24134063 | None:intergenic | 45.0% | |
| ATTAAAACCTATCGCGGTGG+TGG | + | chr7_4:24134101-24134120 | Msa1146470:intron | 45.0% | |
| !! | GGTGGTGGATCTGAGAATTA+GGG | + | chr7_4:24134116-24134135 | Msa1146470:intron | 45.0% |
| TAATTATACGCTAACCCCCC+AGG | + | chr7_4:24131264-24131283 | Msa1146470:intron | 45.0% | |
| AAGGGTCTGTTAAATCCTGG+GGG | - | chr7_4:24131282-24131301 | None:intergenic | 45.0% | |
| GAAGGGTCTGTTAAATCCTG+GGG | - | chr7_4:24134446-24134465 | None:intergenic | 45.0% | |
| ACTCAGCTTGTGTACTGTAC+CGG | + | chr7_4:24131421-24131440 | Msa1146470:intron | 45.0% | |
| CAGTAGGAGTGATATTGACC+AGG | + | chr7_4:24131525-24131544 | Msa1146470:intron | 45.0% | |
| GTCAAAGGCCGTTACCAAAT+TGG | + | chr7_4:24131625-24131644 | Msa1146470:intron | 45.0% | |
| ! | GTTAGTGGTGCCAACATAGT+TGG | - | chr7_4:24135030-24135049 | None:intergenic | 45.0% |
| GGCCTGCAAGATACATAAAG+AGG | + | chr7_4:24135276-24135295 | Msa1146470:CDS | 45.0% | |
| !!! | ATAATAAGATAATAATTTTT+CGG | - | chr7_4:24129064-24129083 | None:intergenic | 5.0% |
| !!! | TTAATTAATTAACTAATTTT+TGG | + | chr7_4:24132279-24132298 | Msa1146470:intron | 5.0% |
| !!! | ATAGAAAATAAATTTTTTTA+AGG | + | chr7_4:24134994-24135013 | Msa1146470:intron | 5.0% |
| GAGCATCACTCACTAGCTCA+TGG | + | chr7_4:24130091-24130110 | Msa1146470:CDS | 50.0% | |
| TGCTGATCGCACTGTCCTTA+AGG | + | chr7_4:24131231-24131250 | Msa1146470:intron | 50.0% | |
| AGGGTCTGTTAAATCCTGGG+GGG | - | chr7_4:24131281-24131300 | None:intergenic | 50.0% | |
| AAATAATCCAGGCACGCGCA+CGG | - | chr7_4:24132052-24132071 | None:intergenic | 50.0% | |
| AGGCCGCTTGTATGAGATCT+TGG | - | chr7_4:24132097-24132116 | None:intergenic | 50.0% | |
| GCCTCACTTGACACTCACAT+AGG | + | chr7_4:24132113-24132132 | Msa1146470:intron | 50.0% | |
| GCACTTCTCACACACACCAT+AGG | + | chr7_4:24132237-24132256 | Msa1146470:intron | 50.0% | |
| CACACACCATAGGAAAGGGA+CGG | + | chr7_4:24132247-24132266 | Msa1146470:intron | 50.0% | |
| GGAGTGACGTGTTCCAATCA+AGG | - | chr7_4:24134003-24134022 | None:intergenic | 50.0% | |
| !! | CGGTGGTGGATCTGAGAATT+AGG | + | chr7_4:24134115-24134134 | Msa1146470:intron | 50.0% |
| TGCTGATCGCACTGTCCTTA+AGG | + | chr7_4:24131231-24131250 | Msa1146470:intron | 50.0% | |
| AGGGTCTGTTAAATCCTGGG+GGG | - | chr7_4:24131281-24131300 | None:intergenic | 50.0% | |
| AATTTGTCCGGTCCCGGCTT+GGG | - | chr7_4:24129117-24129136 | None:intergenic | 55.0% | |
| AAATTTGTCCGGTCCCGGCT+TGG | - | chr7_4:24129118-24129137 | None:intergenic | 55.0% | |
| GACCCTAAGCCCAACCTAAG+AGG | - | chr7_4:24129355-24129374 | None:intergenic | 55.0% | |
| !! | TGGGGGCATCATACGTTGAC+CGG | + | chr7_4:24130946-24130965 | Msa1146470:intron | 55.0% |
| ! | CGTTGACCGGCGTTTTCTTC+TGG | + | chr7_4:24130959-24130978 | Msa1146470:intron | 55.0% |
| ACCCCCACAATTCTTGCCGT+TGG | + | chr7_4:24132006-24132025 | Msa1146470:intron | 55.0% | |
| GCCAACGGCAAGAATTGTGG+GGG | - | chr7_4:24132010-24132029 | None:intergenic | 55.0% | |
| CGCCAACGGCAAGAATTGTG+GGG | - | chr7_4:24132011-24132030 | None:intergenic | 55.0% | |
| GCGCCAACGGCAAGAATTGT+GGG | - | chr7_4:24132012-24132031 | None:intergenic | 55.0% | |
| AGCGCCAACGGCAAGAATTG+TGG | - | chr7_4:24132013-24132032 | None:intergenic | 55.0% | |
| AATTCTTGCCGTTGGCGCTG+TGG | + | chr7_4:24132014-24132033 | Msa1146470:intron | 55.0% | |
| ! | TTGTGGGGGTGTGATGCGAG+TGG | - | chr7_4:24131996-24132015 | None:intergenic | 60.0% |
| CTCAGATCCACCACCGCGAT+AGG | - | chr7_4:24134111-24134130 | None:intergenic | 60.0% | |
| ACATTGGCCCAAGCCGGGAC+CGG | + | chr7_4:24129107-24129126 | Msa1146470:intron | 65.0% | |
| TTCGCGCACCACAGCGCCAA+CGG | - | chr7_4:24132025-24132044 | None:intergenic | 65.0% | |
| TGGCGCTGTGGTGCGCGAAT+AGG | + | chr7_4:24132026-24132045 | Msa1146470:intron | 65.0% | |
| GAATAGGCCGTGCGCGTGCC+TGG | + | chr7_4:24132042-24132061 | Msa1146470:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 24128376 | 24135307 | 24128376 | ID=Msa1146470;Name=Msa1146470 |
| chr7_4 | mRNA | 24128376 | 24135307 | 24128376 | ID=Msa1146470-mRNA-1;Parent=Msa1146470;Name=Msa1146470-mRNA-1;_AED=0.44;_eAED=0.44;_QI=0|0|0|0.75|0.33|0.25|4|0|203 |
| chr7_4 | exon | 24128376 | 24128456 | 24128376 | ID=Msa1146470-mRNA-1:exon:6030;Parent=Msa1146470-mRNA-1 |
| chr7_4 | exon | 24129944 | 24130162 | 24129944 | ID=Msa1146470-mRNA-1:exon:6031;Parent=Msa1146470-mRNA-1 |
| chr7_4 | exon | 24130175 | 24130366 | 24130175 | ID=Msa1146470-mRNA-1:exon:6032;Parent=Msa1146470-mRNA-1 |
| chr7_4 | exon | 24135188 | 24135307 | 24135188 | ID=Msa1146470-mRNA-1:exon:6033;Parent=Msa1146470-mRNA-1 |
| chr7_4 | CDS | 24128376 | 24128456 | 24128376 | ID=Msa1146470-mRNA-1:cds;Parent=Msa1146470-mRNA-1 |
| chr7_4 | CDS | 24129944 | 24130162 | 24129944 | ID=Msa1146470-mRNA-1:cds;Parent=Msa1146470-mRNA-1 |
| chr7_4 | CDS | 24130175 | 24130366 | 24130175 | ID=Msa1146470-mRNA-1:cds;Parent=Msa1146470-mRNA-1 |
| chr7_4 | CDS | 24135188 | 24135307 | 24135188 | ID=Msa1146470-mRNA-1:cds;Parent=Msa1146470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
