Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146550 | XP_039684168.1 | 69.725 | 109 | 22 | 1 | 18 | 115 | 222 | 330 | 1.27e-40 | 147 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146550 | G7KVV6 | 66.972 | 109 | 27 | 2 | 18 | 117 | 207 | 315 | 1.54e-38 | 141 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1146550 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146550 | MtrunA17_Chr7g0233561 | 69.000 | 100 | 20 | 1 | 18 | 106 | 227 | 326 | 7.73e-40 | 135 |
| Msa1146550 | MtrunA17_Chr7g0233531 | 67.347 | 98 | 23 | 2 | 18 | 106 | 180 | 277 | 2.37e-37 | 127 |
| Msa1146550 | MtrunA17_Chr7g0233541 | 69.697 | 99 | 20 | 3 | 18 | 106 | 196 | 294 | 1.01e-36 | 126 |
| Msa1146550 | MtrunA17_Chr3g0131891 | 64.948 | 97 | 25 | 1 | 19 | 106 | 221 | 317 | 1.87e-35 | 124 |
| Msa1146550 | MtrunA17_Chr7g0233521 | 64.948 | 97 | 26 | 1 | 18 | 106 | 181 | 277 | 6.71e-35 | 121 |
| Msa1146550 | MtrunA17_Chr1g0163071 | 40.244 | 82 | 46 | 2 | 19 | 99 | 215 | 294 | 6.03e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 21 sgRNAs with CRISPR-Local
Find 398 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGTAGCTTCTCCTTTAATT+TGG | 0.188576 | 7_4:-24288460 | None:intergenic |
| GCAGATTCTTCCCAAATTAA+AGG | 0.208681 | 7_4:+24288449 | Msa1146550:intron |
| AGTAGCTTCTCCTTTAATTT+GGG | 0.357771 | 7_4:-24288459 | None:intergenic |
| GAGAGGAGATATTCAACTTC+AGG | 0.365011 | 7_4:+24288124 | Msa1146550:CDS |
| CAGGTGTTGAATGGGATACT+TGG | 0.428638 | 7_4:+24288143 | Msa1146550:CDS |
| ATTCAACTTCAGGTGTTGAA+TGG | 0.430462 | 7_4:+24288134 | Msa1146550:CDS |
| TTCAACTTCAGGTGTTGAAT+GGG | 0.452259 | 7_4:+24288135 | Msa1146550:CDS |
| AAGGACAATAACTTGAAAGT+TGG | 0.499244 | 7_4:+24288241 | Msa1146550:CDS |
| AATGGGATACTTGGTCTGCT+AGG | 0.531893 | 7_4:+24288152 | Msa1146550:CDS |
| TCTAAAGATATGAACAATGA+AGG | 0.545794 | 7_4:-24288305 | None:intergenic |
| CTAAAATTTGAACTCACAAG+TGG | 0.566527 | 7_4:+24288202 | Msa1146550:CDS |
| TGAACTCACAAGTGGATGGA+AGG | 0.567593 | 7_4:+24288210 | Msa1146550:CDS |
| ACATGGAAAATCACAGAAGG+TGG | 0.578238 | 7_4:+24282074 | None:intergenic |
| AATTTGAACTCACAAGTGGA+TGG | 0.599548 | 7_4:+24288206 | Msa1146550:CDS |
| TTTGATTTGAATAAGAAGAG+AGG | 0.602796 | 7_4:+24288107 | Msa1146550:CDS |
| ATTAAAGGAGAAGCTACTCA+AGG | 0.620677 | 7_4:+24288464 | Msa1146550:CDS |
| TGGATGGAAGGCATTTGCAA+AGG | 0.640290 | 7_4:+24288222 | Msa1146550:CDS |
| TGTGTCTTACAAAACAAGGA+TGG | 0.644962 | 7_4:-24288083 | None:intergenic |
| CAAATTGATAGAATGTCCAA+AGG | 0.647085 | 7_4:+24282105 | Msa1146550:CDS |
| AAAGTGTGTCTTACAAAACA+AGG | 0.647663 | 7_4:-24288087 | None:intergenic |
| AAAACATGGAAAATCACAGA+AGG | 0.656002 | 7_4:+24282071 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATTATTATT+TGG | + | chr7_4:24282629-24282648 | Msa1146550:intron | 0.0% |
| !!! | ATATTATCATTTTTATTTTC+TGG | + | chr7_4:24282211-24282230 | Msa1146550:intron | 10.0% |
| !!! | GTACTAAATATAATATATTT+TGG | + | chr7_4:24282798-24282817 | Msa1146550:intron | 10.0% |
| !! | ATTTATCCTTAATGTATTTA+GGG | - | chr7_4:24284220-24284239 | None:intergenic | 15.0% |
| !!! | AATATGATTTTATCATTTCT+AGG | - | chr7_4:24285130-24285149 | None:intergenic | 15.0% |
| !! | AAGTTAGATAATTATTTGTA+TGG | + | chr7_4:24286144-24286163 | Msa1146550:intron | 15.0% |
| !!! | GGTGTTTTTATTTTTATTTT+TGG | - | chr7_4:24288001-24288020 | None:intergenic | 15.0% |
| !! | CAACATATGATATGAATTTA+AGG | - | chr7_4:24282378-24282397 | None:intergenic | 20.0% |
| !! | CTTAAATTCATATCATATGT+TGG | + | chr7_4:24282376-24282395 | Msa1146550:intron | 20.0% |
| !! | ATTAGTAGTGTTTATATAGT+GGG | + | chr7_4:24282510-24282529 | Msa1146550:intron | 20.0% |
| !!! | AAAATCTTTTAGCAAAACTT+GGG | - | chr7_4:24282709-24282728 | None:intergenic | 20.0% |
| !!! | ACTTGATCTGAAATATATTT+AGG | + | chr7_4:24282754-24282773 | Msa1146550:intron | 20.0% |
| !!! | TCACAATATTTTTCTATTTG+AGG | + | chr7_4:24283730-24283749 | Msa1146550:intron | 20.0% |
| !! | GTATTATTACCATTCTATTA+TGG | - | chr7_4:24283862-24283881 | None:intergenic | 20.0% |
| !! | GTAATAATACCATATTAAAG+TGG | + | chr7_4:24283872-24283891 | Msa1146550:intron | 20.0% |
| !! | GATTTATCCTTAATGTATTT+AGG | - | chr7_4:24284221-24284240 | None:intergenic | 20.0% |
| !!! | TTTCAATATAGGACTTTTTT+GGG | - | chr7_4:24284365-24284384 | None:intergenic | 20.0% |
| !!! | TTTTCAATATAGGACTTTTT+TGG | - | chr7_4:24284366-24284385 | None:intergenic | 20.0% |
| !!! | GTTGTACTTTTATTATTGAA+AGG | + | chr7_4:24284619-24284638 | Msa1146550:intron | 20.0% |
| !! | TTATTGCACAATTATAGATT+TGG | - | chr7_4:24284727-24284746 | None:intergenic | 20.0% |
| !! | AATCTATAATTGTGCAATAA+AGG | + | chr7_4:24284727-24284746 | Msa1146550:intron | 20.0% |
| !!! | AATTTTAAACTTGAGTAACT+TGG | + | chr7_4:24284962-24284981 | Msa1146550:intron | 20.0% |
| !! | ATTATCTAGTCATATAACTT+TGG | - | chr7_4:24284996-24285015 | None:intergenic | 20.0% |
| !! | TTATAAATAACGAAGCATAT+AGG | + | chr7_4:24285408-24285427 | Msa1146550:intron | 20.0% |
| !!! | CACTATTCTTTAATTTACAA+GGG | - | chr7_4:24285498-24285517 | None:intergenic | 20.0% |
| !! | CTTGTAAATTAAAGAATAGT+GGG | + | chr7_4:24285497-24285516 | Msa1146550:intron | 20.0% |
| !! | TTGTAAATTAAAGAATAGTG+GGG | + | chr7_4:24285498-24285517 | Msa1146550:intron | 20.0% |
| !!! | ATGAATCACTAAAATTTTTC+AGG | - | chr7_4:24286103-24286122 | None:intergenic | 20.0% |
| !!! | TGAAAAATTTTAGTGATTCA+TGG | + | chr7_4:24286102-24286121 | Msa1146550:intron | 20.0% |
| !! | AATATATGATTGCAAGTTTA+CGG | - | chr7_4:24286481-24286500 | None:intergenic | 20.0% |
| !!! | AACCATTTTTTAAATTCAAG+TGG | + | chr7_4:24287706-24287725 | Msa1146550:intron | 20.0% |
| !!! | ACCATTTTTTAAATTCAAGT+GGG | + | chr7_4:24287707-24287726 | Msa1146550:intron | 20.0% |
| !! | TGGAAAGAAAAAAAAAACAA+GGG | - | chr7_4:24288023-24288042 | None:intergenic | 20.0% |
| !! | ATGGAAAGAAAAAAAAAACA+AGG | - | chr7_4:24288024-24288043 | None:intergenic | 20.0% |
| !! | ATTGTTTAACATTTCAAAGT+AGG | + | chr7_4:24288350-24288369 | Msa1146550:intron | 20.0% |
| !! | CTTTAATTAACTTGAACAGT+TGG | + | chr7_4:24282294-24282313 | Msa1146550:intron | 25.0% |
| ! | GGTTGCTAAAAATTTAAACA+TGG | - | chr7_4:24282331-24282350 | None:intergenic | 25.0% |
| ! | ATATTTGACGATAATCTTTG+AGG | - | chr7_4:24282352-24282371 | None:intergenic | 25.0% |
| ! | TAAACACAAATTCTCATGTT+GGG | + | chr7_4:24282427-24282446 | Msa1146550:intron | 25.0% |
| ! | CATTAGTAGTGTTTATATAG+TGG | + | chr7_4:24282509-24282528 | Msa1146550:intron | 25.0% |
| ! | TTAGTAGTGTTTATATAGTG+GGG | + | chr7_4:24282511-24282530 | Msa1146550:intron | 25.0% |
| !! | CAAAATCTTTTAGCAAAACT+TGG | - | chr7_4:24282710-24282729 | None:intergenic | 25.0% |
| ! | TAGTATTTATAGCATGTCAT+GGG | - | chr7_4:24283139-24283158 | None:intergenic | 25.0% |
| ! | GTACAAAAATATCTCAATTG+AGG | - | chr7_4:24283262-24283281 | None:intergenic | 25.0% |
| ! | ACTAATAAGTGAGAAACTTT+GGG | - | chr7_4:24283334-24283353 | None:intergenic | 25.0% |
| ! | AACTAATAAGTGAGAAACTT+TGG | - | chr7_4:24283335-24283354 | None:intergenic | 25.0% |
| ! | GGACATTATTATTCCAAATA+GGG | - | chr7_4:24283670-24283689 | None:intergenic | 25.0% |
| ! | GAAATCAAGAATGATCTTAA+CGG | + | chr7_4:24283694-24283713 | Msa1146550:intron | 25.0% |
| !! | ATAGTACCATATTGATAGTT+TGG | + | chr7_4:24283785-24283804 | Msa1146550:intron | 25.0% |
| ! | ATACTGAAACCACTTTAATA+TGG | - | chr7_4:24283884-24283903 | None:intergenic | 25.0% |
| ! | ACTCAACTTAGTAATAACTT+CGG | + | chr7_4:24284086-24284105 | Msa1146550:intron | 25.0% |
| !!! | CGTCTTAAAATTGTTGTTTT+TGG | - | chr7_4:24284155-24284174 | None:intergenic | 25.0% |
| !!! | ACAACAATTTTAAGACGTTT+CGG | + | chr7_4:24284158-24284177 | Msa1146550:intron | 25.0% |
| ! | ACACTAAGAAATTCACAATA+CGG | + | chr7_4:24284299-24284318 | Msa1146550:intron | 25.0% |
| !! | TGAACCATTGTCAATTTTTA+TGG | - | chr7_4:24284399-24284418 | None:intergenic | 25.0% |
| ! | CATAAACATTGTTTACTGAA+TGG | - | chr7_4:24284536-24284555 | None:intergenic | 25.0% |
| !!! | TTATAGATTTGGAGTTTTTG+TGG | - | chr7_4:24284716-24284735 | None:intergenic | 25.0% |
| ! | GTGCAATAAAGGAAAATAAA+TGG | + | chr7_4:24284738-24284757 | Msa1146550:intron | 25.0% |
| ! | ATTATGATATGTGAACTTGA+TGG | + | chr7_4:24285097-24285116 | Msa1146550:intron | 25.0% |
| !! | GAATTTTTGTTCTTAGACTT+GGG | - | chr7_4:24285249-24285268 | None:intergenic | 25.0% |
| !! | AGAATTTTTGTTCTTAGACT+TGG | - | chr7_4:24285250-24285269 | None:intergenic | 25.0% |
| ! | AGTTCAAAATTAAGACAAGT+TGG | - | chr7_4:24285302-24285321 | None:intergenic | 25.0% |
| !! | ACTTGTCTTAATTTTGAACT+TGG | + | chr7_4:24285302-24285321 | Msa1146550:intron | 25.0% |
| !! | CTTGTCTTAATTTTGAACTT+GGG | + | chr7_4:24285303-24285322 | Msa1146550:intron | 25.0% |
| ! | CTATGATCACTTTAACATTT+AGG | - | chr7_4:24285442-24285461 | None:intergenic | 25.0% |
| !! | CCACTATTCTTTAATTTACA+AGG | - | chr7_4:24285499-24285518 | None:intergenic | 25.0% |
| ! | CCTTGTAAATTAAAGAATAG+TGG | + | chr7_4:24285496-24285515 | Msa1146550:intron | 25.0% |
| ! | TGTAAATTAAAGAATAGTGG+GGG | + | chr7_4:24285499-24285518 | Msa1146550:intron | 25.0% |
| !! | ACTAGTTCTTAATATACAAG+GGG | - | chr7_4:24285548-24285567 | None:intergenic | 25.0% |
| !! | CACTAGTTCTTAATATACAA+GGG | - | chr7_4:24285549-24285568 | None:intergenic | 25.0% |
| ! | CTTGTATATTAAGAACTAGT+GGG | + | chr7_4:24285548-24285567 | Msa1146550:intron | 25.0% |
| ! | TTGTATATTAAGAACTAGTG+GGG | + | chr7_4:24285549-24285568 | Msa1146550:intron | 25.0% |
| ! | TATGAACTTGGTTTATACAT+TGG | + | chr7_4:24285676-24285695 | Msa1146550:intron | 25.0% |
| ! | ATGAGGATATAACTTCTTTA+AGG | - | chr7_4:24285718-24285737 | None:intergenic | 25.0% |
| ! | TAAAGAAGTTATATCCTCAT+TGG | + | chr7_4:24285718-24285737 | Msa1146550:intron | 25.0% |
| ! | AAAAAGAAACTAAAACCTGA+TGG | + | chr7_4:24285862-24285881 | Msa1146550:intron | 25.0% |
| !! | TGGTCTAAAATAAACTCTTA+AGG | + | chr7_4:24286164-24286183 | Msa1146550:intron | 25.0% |
| ! | CTTTGTGAGATTTATCAAAA+AGG | - | chr7_4:24286425-24286444 | None:intergenic | 25.0% |
| ! | TTAGAATCATAGTCTTCTTA+AGG | - | chr7_4:24286690-24286709 | None:intergenic | 25.0% |
| ! | AGTAACCTATTGTACTTAAA+TGG | + | chr7_4:24286725-24286744 | Msa1146550:intron | 25.0% |
| ! | TTGTACCATTTAAGTACAAT+AGG | - | chr7_4:24286733-24286752 | None:intergenic | 25.0% |
| ! | TTAGTAATTCCTTTCATCAA+AGG | - | chr7_4:24287139-24287158 | None:intergenic | 25.0% |
| ! | TTAGAATACACCTTATGAAA+AGG | + | chr7_4:24287531-24287550 | Msa1146550:intron | 25.0% |
| ! | AAATTCTGATTAACATGAGT+TGG | - | chr7_4:24287601-24287620 | None:intergenic | 25.0% |
| !!! | TAAGATTTGCTAGTAAACAA+AGG | - | chr7_4:24287659-24287678 | None:intergenic | 25.0% |
| ! | TTGTTTACTAGCAAATCTTA+TGG | + | chr7_4:24287659-24287678 | Msa1146550:intron | 25.0% |
| !!! | CCATTTTTTAAATTCAAGTG+GGG | + | chr7_4:24287708-24287727 | Msa1146550:intron | 25.0% |
| !!! | CATTTTTTAAATTCAAGTGG+GGG | + | chr7_4:24287709-24287728 | Msa1146550:intron | 25.0% |
| ! | GGAAAGAAAAAAAAAACAAG+GGG | - | chr7_4:24288022-24288041 | None:intergenic | 25.0% |
| !!! | TTTGATTTGAATAAGAAGAG+AGG | + | chr7_4:24288107-24288126 | Msa1146550:CDS | 25.0% |
| ! | TCTAAAGATATGAACAATGA+AGG | - | chr7_4:24288308-24288327 | None:intergenic | 25.0% |
| CAAATTGATAGAATGTCCAA+AGG | + | chr7_4:24282105-24282124 | Msa1146550:CDS | 30.0% | |
| GTCATAAAATCGTATACCTT+TGG | - | chr7_4:24282124-24282143 | None:intergenic | 30.0% | |
| ATCATATGTTGGAACATATG+TGG | + | chr7_4:24282387-24282406 | Msa1146550:intron | 30.0% | |
| CTAAACACAAATTCTCATGT+TGG | + | chr7_4:24282426-24282445 | Msa1146550:intron | 30.0% | |
| GTGTTGTGAATTGAAAAAAG+TGG | + | chr7_4:24282460-24282479 | Msa1146550:intron | 30.0% | |
| TAGTAGTGTTTATATAGTGG+GGG | + | chr7_4:24282512-24282531 | Msa1146550:intron | 30.0% | |
| !! | TTAAGTCTTTAGGAAGGTTT+TGG | - | chr7_4:24282835-24282854 | None:intergenic | 30.0% |
| AACCGTCATAATATTCCTAA+AGG | + | chr7_4:24282928-24282947 | Msa1146550:intron | 30.0% | |
| ! | AGCCTTTAGGAATATTATGA+CGG | - | chr7_4:24282933-24282952 | None:intergenic | 30.0% |
| !! | GGGTATTTATGTATTTTAGG+CGG | - | chr7_4:24283082-24283101 | None:intergenic | 30.0% |
| CCTAAAATACATAAATACCC+CGG | + | chr7_4:24283082-24283101 | Msa1146550:intron | 30.0% | |
| GTAGTATTTATAGCATGTCA+TGG | - | chr7_4:24283140-24283159 | None:intergenic | 30.0% | |
| ACTGTACTTGCAAAAAAGTA+CGG | - | chr7_4:24283239-24283258 | None:intergenic | 30.0% | |
| ! | TTTTTAAACAAGTCGAAGGA+GGG | - | chr7_4:24283478-24283497 | None:intergenic | 30.0% |
| TCTTAAAAACATAGTCCCTT+CGG | + | chr7_4:24283599-24283618 | Msa1146550:intron | 30.0% | |
| ! | AAAGTACTCTTTATTCCGAA+GGG | - | chr7_4:24283635-24283654 | None:intergenic | 30.0% |
| !! | AAAAGTACTCTTTATTCCGA+AGG | - | chr7_4:24283636-24283655 | None:intergenic | 30.0% |
| TTAAGATCATAGTCCCTATT+TGG | + | chr7_4:24283654-24283673 | Msa1146550:intron | 30.0% | |
| GGGACATTATTATTCCAAAT+AGG | - | chr7_4:24283671-24283690 | None:intergenic | 30.0% | |
| AAGATCATTCTTGATTTCGA+CGG | - | chr7_4:24283692-24283711 | None:intergenic | 30.0% | |
| TTCTATTTGAGGAGAAATTG+TGG | + | chr7_4:24283741-24283760 | Msa1146550:intron | 30.0% | |
| AGTTCTCCAAACTATCAATA+TGG | - | chr7_4:24283794-24283813 | None:intergenic | 30.0% | |
| TGATAGTTTGGAGAACTTAA+AGG | + | chr7_4:24283797-24283816 | Msa1146550:intron | 30.0% | |
| GAGAATTACACCTTCAAATA+TGG | - | chr7_4:24283925-24283944 | None:intergenic | 30.0% | |
| CTTCGGTAGATAATAGAATT+TGG | + | chr7_4:24284103-24284122 | Msa1146550:intron | 30.0% | |
| GAAATCCAAATACAACAGTT+TGG | + | chr7_4:24284125-24284144 | Msa1146550:intron | 30.0% | |
| GATTTCCAAACTGTTGTATT+TGG | - | chr7_4:24284133-24284152 | None:intergenic | 30.0% | |
| ACCTCAATAAGTAACTTCTT+CGG | - | chr7_4:24284189-24284208 | None:intergenic | 30.0% | |
| AGTTGTCCCTAAATACATTA+AGG | + | chr7_4:24284211-24284230 | Msa1146550:intron | 30.0% | |
| !! | TGGCTGCTTATTTTCAATAT+AGG | - | chr7_4:24284376-24284395 | None:intergenic | 30.0% |
| ! | ACCATTGTCAATTTTTATGG+TGG | - | chr7_4:24284396-24284415 | None:intergenic | 30.0% |
| ! | GAAACTTCACAATCAGATTT+TGG | + | chr7_4:24284649-24284668 | Msa1146550:intron | 30.0% |
| AATCACACGACTAAAATAGA+AGG | - | chr7_4:24284914-24284933 | None:intergenic | 30.0% | |
| TCTGAACTATATTTGGATTC+TGG | + | chr7_4:24285330-24285349 | Msa1146550:intron | 30.0% | |
| CCTAATGAATACACATTCAT+AGG | - | chr7_4:24285384-24285403 | None:intergenic | 30.0% | |
| CCTATGAATGTGTATTCATT+AGG | + | chr7_4:24285381-24285400 | Msa1146550:intron | 30.0% | |
| ! | CCACTAGTTCTTAATATACA+AGG | - | chr7_4:24285550-24285569 | None:intergenic | 30.0% |
| CCTTGTATATTAAGAACTAG+TGG | + | chr7_4:24285547-24285566 | Msa1146550:intron | 30.0% | |
| TGTATATTAAGAACTAGTGG+GGG | + | chr7_4:24285550-24285569 | Msa1146550:intron | 30.0% | |
| ! | ATAGCTAAAGAGTATGAACT+TGG | + | chr7_4:24285664-24285683 | Msa1146550:intron | 30.0% |
| AGAAGCAATAAACGATGAAA+TGG | + | chr7_4:24285757-24285776 | Msa1146550:intron | 30.0% | |
| AAAATCCAAATACAACCGTT+TGG | - | chr7_4:24285840-24285859 | None:intergenic | 30.0% | |
| ! | AAACGGTTGTATTTGGATTT+TGG | + | chr7_4:24285839-24285858 | Msa1146550:intron | 30.0% |
| !! | TTCTAAAACCTTTGACTACA+AGG | - | chr7_4:24285912-24285931 | None:intergenic | 30.0% |
| ATGGATATGATTATAGTGAC+TGG | - | chr7_4:24285972-24285991 | None:intergenic | 30.0% | |
| !! | TGTGAAAGTTGCCTTATTTA+TGG | + | chr7_4:24286046-24286065 | Msa1146550:intron | 30.0% |
| GAATTACTTCAACTTTGTCT+AGG | - | chr7_4:24286369-24286388 | None:intergenic | 30.0% | |
| GACAAAGTTGAAGTAATTCT+TGG | + | chr7_4:24286370-24286389 | Msa1146550:intron | 30.0% | |
| ACAAAGTTGAGAAGATCTTA+AGG | + | chr7_4:24286439-24286458 | Msa1146550:intron | 30.0% | |
| !! | GATTCTAAGATTACTTCACT+AGG | + | chr7_4:24286702-24286721 | Msa1146550:intron | 30.0% |
| ! | CAAATTAACACTTCTGGAAA+CGG | - | chr7_4:24286958-24286977 | None:intergenic | 30.0% |
| TCACAACAAATTAACACTTC+TGG | - | chr7_4:24286964-24286983 | None:intergenic | 30.0% | |
| TTAGTCAATCCTTTGATGAA+AGG | + | chr7_4:24287127-24287146 | Msa1146550:intron | 30.0% | |
| GATATATACTCTATGTTGAG+TGG | + | chr7_4:24287365-24287384 | Msa1146550:intron | 30.0% | |
| TTATGAAAAGGTTTGTGTGT+GGG | + | chr7_4:24287543-24287562 | Msa1146550:intron | 30.0% | |
| CCCCACTTGAATTTAAAAAA+TGG | - | chr7_4:24287711-24287730 | None:intergenic | 30.0% | |
| !! | TTTTTGGTGATCAAAAGACT+GGG | - | chr7_4:24287985-24288004 | None:intergenic | 30.0% |
| !!! | ATTTTTGGTGATCAAAAGAC+TGG | - | chr7_4:24287986-24288005 | None:intergenic | 30.0% |
| ! | AAGATGCAAATGTTGATGAA+TGG | - | chr7_4:24288043-24288062 | None:intergenic | 30.0% |
| AAAGTGTGTCTTACAAAACA+AGG | - | chr7_4:24288090-24288109 | None:intergenic | 30.0% | |
| CTAAAATTTGAACTCACAAG+TGG | + | chr7_4:24288202-24288221 | Msa1146550:CDS | 30.0% | |
| AAGGACAATAACTTGAAAGT+TGG | + | chr7_4:24288241-24288260 | Msa1146550:CDS | 30.0% | |
| ! | AGTAGCTTCTCCTTTAATTT+GGG | - | chr7_4:24288462-24288481 | None:intergenic | 30.0% |
| TATGACTTCTTCATTGTGTC+AGG | + | chr7_4:24282138-24282157 | Msa1146550:intron | 35.0% | |
| !!! | TTTTATTTTCTGGAGCGAGA+AGG | + | chr7_4:24282221-24282240 | Msa1146550:intron | 35.0% |
| !!! | TTTATTTTCTGGAGCGAGAA+GGG | + | chr7_4:24282222-24282241 | Msa1146550:intron | 35.0% |
| AAAAAGTGGAAGTCTCACAT+CGG | + | chr7_4:24282474-24282493 | Msa1146550:intron | 35.0% | |
| TATGTACCCCCATTAATTAG+AGG | - | chr7_4:24282542-24282561 | None:intergenic | 35.0% | |
| ! | AGGTCATTAAGTCTTTAGGA+AGG | - | chr7_4:24282841-24282860 | None:intergenic | 35.0% |
| CTAGAGGTCATTAAGTCTTT+AGG | - | chr7_4:24282845-24282864 | None:intergenic | 35.0% | |
| AAGACTTAATGACCTCTAGA+AGG | + | chr7_4:24282846-24282865 | Msa1146550:intron | 35.0% | |
| !! | CCGGGGTATTTATGTATTTT+AGG | - | chr7_4:24283085-24283104 | None:intergenic | 35.0% |
| CTAGGGTTTAGACTGATTAT+TGG | - | chr7_4:24283187-24283206 | None:intergenic | 35.0% | |
| ! | CTTGCAAAAAAGTACGGTAA+GGG | - | chr7_4:24283233-24283252 | None:intergenic | 35.0% |
| ! | ACTTGCAAAAAAGTACGGTA+AGG | - | chr7_4:24283234-24283253 | None:intergenic | 35.0% |
| ! | CTTTTTAAACAAGTCGAAGG+AGG | - | chr7_4:24283479-24283498 | None:intergenic | 35.0% |
| ! | GGACTTTTTAAACAAGTCGA+AGG | - | chr7_4:24283482-24283501 | None:intergenic | 35.0% |
| AAAGGAGTAGAAAAAGGAGA+AGG | - | chr7_4:24283503-24283522 | None:intergenic | 35.0% | |
| ! | AGAACACTCTTATTTCCGAA+GGG | - | chr7_4:24283530-24283549 | None:intergenic | 35.0% |
| ! | AAGAACACTCTTATTTCCGA+AGG | - | chr7_4:24283531-24283550 | None:intergenic | 35.0% |
| AAGGGACATTATACCGAATA+GGG | - | chr7_4:24283564-24283583 | None:intergenic | 35.0% | |
| TATTCGGTATAATGTCCCTT+CGG | + | chr7_4:24283564-24283583 | Msa1146550:intron | 35.0% | |
| AGACCTTTCTTAATTCCGAA+GGG | - | chr7_4:24283582-24283601 | None:intergenic | 35.0% | |
| AAGACCTTTCTTAATTCCGA+AGG | - | chr7_4:24283583-24283602 | None:intergenic | 35.0% | |
| AGATCATTCTTGATTTCGAC+GGG | - | chr7_4:24283691-24283710 | None:intergenic | 35.0% | |
| GTACTATGACCACTCAAATA+TGG | - | chr7_4:24283772-24283791 | None:intergenic | 35.0% | |
| GGAGAACTTAAAGGTTAGAA+TGG | + | chr7_4:24283806-24283825 | Msa1146550:intron | 35.0% | |
| GAACTTAAAGGTTAGAATGG+TGG | + | chr7_4:24283809-24283828 | Msa1146550:intron | 35.0% | |
| GTCTTAGCACCATAATAGAA+TGG | + | chr7_4:24283850-24283869 | Msa1146550:intron | 35.0% | |
| GTGGTTTCAGTATTAAAGAG+TGG | + | chr7_4:24283891-24283910 | Msa1146550:intron | 35.0% | |
| GGTCTTAGTACCATATTTGA+AGG | + | chr7_4:24283912-24283931 | Msa1146550:intron | 35.0% | |
| ! | TTGAAGGTGTAATTCTCGAA+CGG | + | chr7_4:24283928-24283947 | Msa1146550:intron | 35.0% |
| ! | AATTCTCGAACGGTTTTCTA+CGG | + | chr7_4:24283938-24283957 | Msa1146550:intron | 35.0% |
| ! | TAGTCTACCTTGCACAATTT+TGG | + | chr7_4:24284022-24284041 | Msa1146550:intron | 35.0% |
| ! | AGTCTACCTTGCACAATTTT+GGG | + | chr7_4:24284023-24284042 | Msa1146550:intron | 35.0% |
| ACTCTAATTGCCAAGAGAAT+AGG | + | chr7_4:24284337-24284356 | Msa1146550:intron | 35.0% | |
| !!! | TTTTTGGGTTCCTATTCTCT+TGG | - | chr7_4:24284350-24284369 | None:intergenic | 35.0% |
| GCCACCATAAAAATTGACAA+TGG | + | chr7_4:24284392-24284411 | Msa1146550:intron | 35.0% | |
| TTGTGCAAAACCATGTCATA+AGG | + | chr7_4:24284431-24284450 | Msa1146550:intron | 35.0% | |
| TGTGCAAAACCATGTCATAA+GGG | + | chr7_4:24284432-24284451 | Msa1146550:intron | 35.0% | |
| ! | CTTTTCCTAACAAGAGTGAA+TGG | - | chr7_4:24284860-24284879 | None:intergenic | 35.0% |
| GGGATTGTCTGAACTATATT+TGG | + | chr7_4:24285323-24285342 | Msa1146550:intron | 35.0% | |
| GATGTTATAGAACCTCAAAG+AGG | + | chr7_4:24285628-24285647 | Msa1146550:intron | 35.0% | |
| CTCATAGTTGCAAAACCAAA+CGG | + | chr7_4:24285822-24285841 | Msa1146550:intron | 35.0% | |
| CAAAACCAAACGGTTGTATT+TGG | + | chr7_4:24285832-24285851 | Msa1146550:intron | 35.0% | |
| GAAACTAAAACCTGATGGTA+CGG | + | chr7_4:24285867-24285886 | Msa1146550:intron | 35.0% | |
| ! | TAAAGGGACTAGTACTCTTA+TGG | - | chr7_4:24285991-24286010 | None:intergenic | 35.0% |
| GAGTACTATCGAGTTATGAA+CGG | - | chr7_4:24286018-24286037 | None:intergenic | 35.0% | |
| TAACTCGATAGTACTCCAAA+TGG | + | chr7_4:24286022-24286041 | Msa1146550:intron | 35.0% | |
| GATTCATGGACAAGAAAACA+AGG | + | chr7_4:24286116-24286135 | Msa1146550:intron | 35.0% | |
| ATCTCAAGTGTTCTAACACT+TGG | - | chr7_4:24286509-24286528 | None:intergenic | 35.0% | |
| GCACAATAATTTCACGACAT+CGG | - | chr7_4:24286609-24286628 | None:intergenic | 35.0% | |
| TGTGCAAGTTTACTAGTAGA+CGG | + | chr7_4:24286624-24286643 | Msa1146550:intron | 35.0% | |
| TCATGACTCTTTCTATAGCA+TGG | - | chr7_4:24286663-24286682 | None:intergenic | 35.0% | |
| ATGCTATAGAAAGAGTCATG+AGG | + | chr7_4:24286662-24286681 | Msa1146550:intron | 35.0% | |
| ATCTCAGATTCATTCCATAG+TGG | - | chr7_4:24286860-24286879 | None:intergenic | 35.0% | |
| AGAACACTAGAGAAAACTAG+TGG | + | chr7_4:24286881-24286900 | Msa1146550:intron | 35.0% | |
| !! | GAAACGGTTTTATCCACTAA+GGG | - | chr7_4:24286942-24286961 | None:intergenic | 35.0% |
| ATTGAGAATCGTTACCACAA+TGG | + | chr7_4:24287005-24287024 | Msa1146550:intron | 35.0% | |
| GTCACGAACACATAAAGTAT+TGG | + | chr7_4:24287045-24287064 | Msa1146550:intron | 35.0% | |
| CTAACTACTCTCAAAAGGAA+CGG | + | chr7_4:24287072-24287091 | Msa1146550:intron | 35.0% | |
| AAGTCCTAAACACATCCAAT+AGG | + | chr7_4:24287164-24287183 | Msa1146550:intron | 35.0% | |
| CTAAACACATCCAATAGGAT+GGG | + | chr7_4:24287169-24287188 | Msa1146550:intron | 35.0% | |
| ATCCCAAGAAATAGGTTCAA+TGG | + | chr7_4:24287243-24287262 | Msa1146550:intron | 35.0% | |
| TCCCAAGAAATAGGTTCAAT+GGG | + | chr7_4:24287244-24287263 | Msa1146550:intron | 35.0% | |
| ! | ACCCATTGAACCTATTTCTT+GGG | - | chr7_4:24287248-24287267 | None:intergenic | 35.0% |
| ! | TACCCATTGAACCTATTTCT+TGG | - | chr7_4:24287249-24287268 | None:intergenic | 35.0% |
| ACAAGTGATAGAACATGCTA+TGG | + | chr7_4:24287279-24287298 | Msa1146550:intron | 35.0% | |
| CAAGTGATAGAACATGCTAT+GGG | + | chr7_4:24287280-24287299 | Msa1146550:intron | 35.0% | |
| ! | CACACACAAACCTTTTCATA+AGG | - | chr7_4:24287544-24287563 | None:intergenic | 35.0% |
| CTTATGAAAAGGTTTGTGTG+TGG | + | chr7_4:24287542-24287561 | Msa1146550:intron | 35.0% | |
| TGACAATTGGCTACATAATG+TGG | - | chr7_4:24287847-24287866 | None:intergenic | 35.0% | |
| CATTATGTAGCCAATTGTCA+CGG | + | chr7_4:24287847-24287866 | Msa1146550:intron | 35.0% | |
| ! | CTCAATTTTACCGTGACAAT+TGG | - | chr7_4:24287860-24287879 | None:intergenic | 35.0% |
| TGTGTCTTACAAAACAAGGA+TGG | - | chr7_4:24288086-24288105 | None:intergenic | 35.0% | |
| !! | ATTCAACTTCAGGTGTTGAA+TGG | + | chr7_4:24288134-24288153 | Msa1146550:CDS | 35.0% |
| !! | TTCAACTTCAGGTGTTGAAT+GGG | + | chr7_4:24288135-24288154 | Msa1146550:CDS | 35.0% |
| AATTTGAACTCACAAGTGGA+TGG | + | chr7_4:24288206-24288225 | Msa1146550:CDS | 35.0% | |
| GCAGATTCTTCCCAAATTAA+AGG | + | chr7_4:24288449-24288468 | Msa1146550:intron | 35.0% | |
| GAGTAGCTTCTCCTTTAATT+TGG | - | chr7_4:24288463-24288482 | None:intergenic | 35.0% | |
| ATTAAAGGAGAAGCTACTCA+AGG | + | chr7_4:24288464-24288483 | Msa1146550:CDS | 35.0% | |
| GGGGTGTACCTCTAATTAAT+GGG | + | chr7_4:24282531-24282550 | Msa1146550:intron | 40.0% | |
| GGGTGTACCTCTAATTAATG+GGG | + | chr7_4:24282532-24282551 | Msa1146550:intron | 40.0% | |
| GGTGTACCTCTAATTAATGG+GGG | + | chr7_4:24282533-24282552 | Msa1146550:intron | 40.0% | |
| !! | AGTCTTTAGGAAGGTTTTGG+TGG | - | chr7_4:24282832-24282851 | None:intergenic | 40.0% |
| ! | AGGTTTCTAGAAGCCTAGAA+GGG | - | chr7_4:24283052-24283071 | None:intergenic | 40.0% |
| !! | GTATTTTAGGCGGTTTCTAG+AGG | - | chr7_4:24283072-24283091 | None:intergenic | 40.0% |
| TTATAGCATGTCATGGGCTT+GGG | - | chr7_4:24283133-24283152 | None:intergenic | 40.0% | |
| TTTATAGCATGTCATGGGCT+TGG | - | chr7_4:24283134-24283153 | None:intergenic | 40.0% | |
| !! | ACTCTTTGAGAGCATTCTCA+AGG | + | chr7_4:24283158-24283177 | Msa1146550:intron | 40.0% |
| ! | GGGCTAAGTATCGTATTCTA+GGG | - | chr7_4:24283204-24283223 | None:intergenic | 40.0% |
| ! | AGGGCTAAGTATCGTATTCT+AGG | - | chr7_4:24283205-24283224 | None:intergenic | 40.0% |
| AAGTACGGTAAGGGATACTA+GGG | - | chr7_4:24283224-24283243 | None:intergenic | 40.0% | |
| AAAGTACGGTAAGGGATACT+AGG | - | chr7_4:24283225-24283244 | None:intergenic | 40.0% | |
| CGTCAACACAAGTCAAGAAA+GGG | - | chr7_4:24283438-24283457 | None:intergenic | 40.0% | |
| TCGTCAACACAAGTCAAGAA+AGG | - | chr7_4:24283439-24283458 | None:intergenic | 40.0% | |
| GGACAGAAAGGAGTAGAAAA+AGG | - | chr7_4:24283509-24283528 | None:intergenic | 40.0% | |
| TTATTTCCGAAGGGACAGAA+AGG | - | chr7_4:24283521-24283540 | None:intergenic | 40.0% | |
| CTTAAGACCTAGTCCCTATT+CGG | + | chr7_4:24283548-24283567 | Msa1146550:intron | 40.0% | |
| CATTATACCGAATAGGGACT+AGG | - | chr7_4:24283558-24283577 | None:intergenic | 40.0% | |
| GAAGGGACATTATACCGAAT+AGG | - | chr7_4:24283565-24283584 | None:intergenic | 40.0% | |
| TGTCCCTTCGGAATTAAGAA+AGG | + | chr7_4:24283576-24283595 | Msa1146550:intron | 40.0% | |
| AAGGGACGTATATTACCGAA+GGG | - | chr7_4:24283617-24283636 | None:intergenic | 40.0% | |
| TTCGGTAATATACGTCCCTT+CGG | + | chr7_4:24283617-24283636 | Msa1146550:intron | 40.0% | |
| GTGGTAACACCATATTTGAG+TGG | + | chr7_4:24283760-24283779 | Msa1146550:intron | 40.0% | |
| GTGGAAACACCATATTTCAG+TGG | + | chr7_4:24283828-24283847 | Msa1146550:intron | 40.0% | |
| GTGCTAAGACCACTGAAATA+TGG | - | chr7_4:24283840-24283859 | None:intergenic | 40.0% | |
| GCCGAAGAAGTTACTTATTG+AGG | + | chr7_4:24284185-24284204 | Msa1146550:intron | 40.0% | |
| ! | TGGAGTTTTTGTGGCTCAAT+GGG | - | chr7_4:24284707-24284726 | None:intergenic | 40.0% |
| ! | TTGGAGTTTTTGTGGCTCAA+TGG | - | chr7_4:24284708-24284727 | None:intergenic | 40.0% |
| TACTAGTGAGTTCAACTCTC+GGG | - | chr7_4:24285358-24285377 | None:intergenic | 40.0% | |
| CTACTAGTGAGTTCAACTCT+CGG | - | chr7_4:24285359-24285378 | None:intergenic | 40.0% | |
| ! | CTAGCTTTCTTACCTCTTTG+AGG | - | chr7_4:24285643-24285662 | None:intergenic | 40.0% |
| CCATAATTCAGCATCCAATG+AGG | - | chr7_4:24285735-24285754 | None:intergenic | 40.0% | |
| CCTCATTGGATGCTGAATTA+TGG | + | chr7_4:24285732-24285751 | Msa1146550:intron | 40.0% | |
| TATTCATCAACCGTACCATC+AGG | - | chr7_4:24285880-24285899 | None:intergenic | 40.0% | |
| !! | TGGTACGGTTGATGAATACA+AGG | + | chr7_4:24285882-24285901 | Msa1146550:intron | 40.0% |
| AAGGCTATCCTTGTAGTCAA+AGG | + | chr7_4:24285901-24285920 | Msa1146550:intron | 40.0% | |
| AGTTATGAACGGCGACTAAA+GGG | - | chr7_4:24286007-24286026 | None:intergenic | 40.0% | |
| AGGCAACTTTCACATCCATT+TGG | - | chr7_4:24286040-24286059 | None:intergenic | 40.0% | |
| GAGCATCATTGACAGTACTT+AGG | + | chr7_4:24286552-24286571 | Msa1146550:intron | 40.0% | |
| !! | GATATTGACTCAGTCCACTA+TGG | + | chr7_4:24286843-24286862 | Msa1146550:intron | 40.0% |
| !! | GGAAACGGTTTTATCCACTA+AGG | - | chr7_4:24286943-24286962 | None:intergenic | 40.0% |
| ATCGTTACCACAATGGTAAG+AGG | + | chr7_4:24287012-24287031 | Msa1146550:intron | 40.0% | |
| ATAATCGCCTCTTACCATTG+TGG | - | chr7_4:24287022-24287041 | None:intergenic | 40.0% | |
| GAGAGCTAACTACTCTCAAA+AGG | + | chr7_4:24287067-24287086 | Msa1146550:intron | 40.0% | |
| CCATCCTATTGGATGTGTTT+AGG | - | chr7_4:24287171-24287190 | None:intergenic | 40.0% | |
| CCTAAACACATCCAATAGGA+TGG | + | chr7_4:24287168-24287187 | Msa1146550:intron | 40.0% | |
| TACCATCACTTGTGACCTTT+GGG | - | chr7_4:24287202-24287221 | None:intergenic | 40.0% | |
| TTACCATCACTTGTGACCTT+TGG | - | chr7_4:24287203-24287222 | None:intergenic | 40.0% | |
| TAGACTCACCTATACGAATG+TGG | + | chr7_4:24287415-24287434 | Msa1146550:intron | 40.0% | |
| ! | CTAGAGCGTTCGTTAAAACT+GGG | + | chr7_4:24287476-24287495 | Msa1146550:intron | 40.0% |
| ! | GAATTTTACTCGCTATGCAG+AGG | + | chr7_4:24287615-24287634 | Msa1146550:intron | 40.0% |
| !! | TATGCAGAGGTTCAAGTTGT+AGG | + | chr7_4:24287628-24287647 | Msa1146550:intron | 40.0% |
| AAATTCAAGTGGGGGATTGT+TGG | + | chr7_4:24287717-24287736 | Msa1146550:intron | 40.0% | |
| GAGAGGAGATATTCAACTTC+AGG | + | chr7_4:24288124-24288143 | Msa1146550:CDS | 40.0% | |
| ! | GGTCTGCTAGGTATTTTATC+AGG | + | chr7_4:24288164-24288183 | Msa1146550:intron | 40.0% |
| TTTATCAGGATGTGCGCTAA+AGG | + | chr7_4:24288178-24288197 | Msa1146550:intron | 40.0% | |
| ! | GGGGGTGTACCTCTAATTAA+TGG | + | chr7_4:24282530-24282549 | Msa1146550:intron | 45.0% |
| !! | AGGAAGGTTTTGGTGGTTCA+AGG | - | chr7_4:24282825-24282844 | None:intergenic | 45.0% |
| AAGTGATGACAACATGGGAC+TGG | - | chr7_4:24282873-24282892 | None:intergenic | 45.0% | |
| AGGCGAAGTGATGACAACAT+GGG | - | chr7_4:24282878-24282897 | None:intergenic | 45.0% | |
| AAGGCGAAGTGATGACAACA+TGG | - | chr7_4:24282879-24282898 | None:intergenic | 45.0% | |
| ! | TTTCTAGAAGCCTAGAAGGG+CGG | - | chr7_4:24283049-24283068 | None:intergenic | 45.0% |
| ! | GAGGTTTCTAGAAGCCTAGA+AGG | - | chr7_4:24283053-24283072 | None:intergenic | 45.0% |
| ACATAAATACCCCGGTTGCT+TGG | + | chr7_4:24283090-24283109 | Msa1146550:intron | 45.0% | |
| CATAAATACCCCGGTTGCTT+GGG | + | chr7_4:24283091-24283110 | Msa1146550:intron | 45.0% | |
| ! | TCCACACACCATTGAGTTGT+CGG | + | chr7_4:24283394-24283413 | Msa1146550:intron | 45.0% |
| TCTACTCCTTTCTGTCCCTT+CGG | + | chr7_4:24283512-24283531 | Msa1146550:intron | 45.0% | |
| GAAGGGACGTATATTACCGA+AGG | - | chr7_4:24283618-24283637 | None:intergenic | 45.0% | |
| TTAACCGCACAGTTGTAGCT+GGG | + | chr7_4:24283969-24283988 | Msa1146550:intron | 45.0% | |
| !!! | TAGCTGGGCTTGTTTTATCC+TGG | + | chr7_4:24283984-24284003 | Msa1146550:intron | 45.0% |
| GCACTACCCAAAATTGTGCA+AGG | - | chr7_4:24284032-24284051 | None:intergenic | 45.0% | |
| !! | GCTCTCTTTAAGACGTTTCG+TGG | - | chr7_4:24284054-24284073 | None:intergenic | 45.0% |
| ! | TACTAAGTTGAGTCACGACC+AGG | - | chr7_4:24284079-24284098 | None:intergenic | 45.0% |
| TCGACCTGCTCTTATACTTG+CGG | - | chr7_4:24284458-24284477 | None:intergenic | 45.0% | |
| TTTGTGGCTCAATGGGTCTA+TGG | - | chr7_4:24284700-24284719 | None:intergenic | 45.0% | |
| GTGCACCATTCACTCTTGTT+AGG | + | chr7_4:24284852-24284871 | Msa1146550:intron | 45.0% | |
| ACTAGTGAGTTCAACTCTCG+GGG | - | chr7_4:24285357-24285376 | None:intergenic | 45.0% | |
| GAGTTATGAACGGCGACTAA+AGG | - | chr7_4:24286008-24286027 | None:intergenic | 45.0% | |
| TTTCACGACATCGGCAATGT+CGG | - | chr7_4:24286600-24286619 | None:intergenic | 45.0% | |
| TGCACATTGAGCATCACTAG+AGG | + | chr7_4:24286800-24286819 | Msa1146550:intron | 45.0% | |
| TGCTAGTTGAGATCCCTTAG+TGG | + | chr7_4:24286926-24286945 | Msa1146550:intron | 45.0% | |
| GGGCATTAATCCCATCCTAT+TGG | - | chr7_4:24287182-24287201 | None:intergenic | 45.0% | |
| AGGATGGGATTAATGCCCAA+AGG | + | chr7_4:24287184-24287203 | Msa1146550:intron | 45.0% | |
| GACTGGAGATCCCAAGAAAT+AGG | + | chr7_4:24287235-24287254 | Msa1146550:intron | 45.0% | |
| ATGAACCATGCAGCGATAGA+AGG | + | chr7_4:24287317-24287336 | Msa1146550:intron | 45.0% | |
| TGAGTGGAGTACATAGCTAC+AGG | + | chr7_4:24287381-24287400 | Msa1146550:intron | 45.0% | |
| CCTCAGTTCCACATTCGTAT+AGG | - | chr7_4:24287426-24287445 | None:intergenic | 45.0% | |
| CCTATACGAATGTGGAACTG+AGG | + | chr7_4:24287423-24287442 | Msa1146550:intron | 45.0% | |
| TATTCTGCCCCGAATTCCAT+AGG | - | chr7_4:24287455-24287474 | None:intergenic | 45.0% | |
| !! | CCAGTTTTAACGAACGCTCT+AGG | - | chr7_4:24287478-24287497 | None:intergenic | 45.0% |
| ! | CCTAGAGCGTTCGTTAAAAC+TGG | + | chr7_4:24287475-24287494 | Msa1146550:intron | 45.0% |
| AAAACTGGGATAGACGTGCA+TGG | + | chr7_4:24287490-24287509 | Msa1146550:intron | 45.0% | |
| TCTAAAAGCCCGTGCGTTTA+TGG | - | chr7_4:24287516-24287535 | None:intergenic | 45.0% | |
| !! | CAGGTGTTGAATGGGATACT+TGG | + | chr7_4:24288143-24288162 | Msa1146550:CDS | 45.0% |
| AATGGGATACTTGGTCTGCT+AGG | + | chr7_4:24288152-24288171 | Msa1146550:CDS | 45.0% | |
| TGAACTCACAAGTGGATGGA+AGG | + | chr7_4:24288210-24288229 | Msa1146550:CDS | 45.0% | |
| !! | TGGATGGAAGGCATTTGCAA+AGG | + | chr7_4:24288222-24288241 | Msa1146550:CDS | 45.0% |
| !! | TTAATTAATTGAAATATTAT+TGG | + | chr7_4:24287920-24287939 | Msa1146550:intron | 5.0% |
| !!! | TTTTCTGGAGCGAGAAGGGA+TGG | + | chr7_4:24282226-24282245 | Msa1146550:intron | 50.0% |
| AGTGGAAGTCTCACATCGGA+TGG | + | chr7_4:24282478-24282497 | Msa1146550:intron | 50.0% | |
| TTGTCCCAAGACTCGTGCTT+GGG | + | chr7_4:24282897-24282916 | Msa1146550:intron | 50.0% | |
| TGGAGGGCTTCTAAGCCTTT+AGG | - | chr7_4:24282946-24282965 | None:intergenic | 50.0% | |
| GGTCTTAGAGCCTTTCTGGA+GGG | - | chr7_4:24282962-24282981 | None:intergenic | 50.0% | |
| AGGTCTTAGAGCCTTTCTGG+AGG | - | chr7_4:24282963-24282982 | None:intergenic | 50.0% | |
| TGGAGGTCTTAGAGCCTTTC+TGG | - | chr7_4:24282966-24282985 | None:intergenic | 50.0% | |
| !! | AGGCTCTAAGACCTCCAGAA+AGG | + | chr7_4:24282969-24282988 | Msa1146550:intron | 50.0% |
| TAAGACCTCCAGAAAGGCTC+AGG | + | chr7_4:24282975-24282994 | Msa1146550:intron | 50.0% | |
| TTGCTTGGTTCCCAAGCAAC+CGG | - | chr7_4:24283104-24283123 | None:intergenic | 50.0% | |
| CATGTCATGGGCTTGGGTTT+CGG | - | chr7_4:24283127-24283146 | None:intergenic | 50.0% | |
| ! | CCACACACCATTGAGTTGTC+GGG | + | chr7_4:24283395-24283414 | Msa1146550:intron | 50.0% |
| ! | CACACACCATTGAGTTGTCG+GGG | + | chr7_4:24283396-24283415 | Msa1146550:intron | 50.0% |
| AAGAGTCCCCGACAACTCAA+TGG | - | chr7_4:24283405-24283424 | None:intergenic | 50.0% | |
| GTTAACCGCACAGTTGTAGC+TGG | + | chr7_4:24283968-24283987 | Msa1146550:intron | 50.0% | |
| !!! | CTGGGCTTGTTTTATCCTGG+AGG | + | chr7_4:24283987-24284006 | Msa1146550:intron | 50.0% |
| !!! | GGCTTGTTTTATCCTGGAGG+CGG | + | chr7_4:24283990-24284009 | Msa1146550:intron | 50.0% |
| ACGTCTTAAAGAGAGCGACC+TGG | + | chr7_4:24284058-24284077 | Msa1146550:intron | 50.0% | |
| TACTTGCGGCCCTTATGACA+TGG | - | chr7_4:24284444-24284463 | None:intergenic | 50.0% | |
| !! | AAGAATAGTGGGGGCACTAG+TGG | + | chr7_4:24285508-24285527 | Msa1146550:intron | 50.0% |
| !! | AGAATAGTGGGGGCACTAGT+GGG | + | chr7_4:24285509-24285528 | Msa1146550:intron | 50.0% |
| TGCCCAAAGGTCACAAGTGA+TGG | + | chr7_4:24287197-24287216 | Msa1146550:intron | 50.0% | |
| GATCTCCAGTCATGTAGGTC+GGG | - | chr7_4:24287226-24287245 | None:intergenic | 50.0% | |
| GGATCTCCAGTCATGTAGGT+CGG | - | chr7_4:24287227-24287246 | None:intergenic | 50.0% | |
| CTTGGGATCTCCAGTCATGT+AGG | - | chr7_4:24287231-24287250 | None:intergenic | 50.0% | |
| CTCATCCTTCTATCGCTGCA+TGG | - | chr7_4:24287325-24287344 | None:intergenic | 50.0% | |
| TACGAATGTGGAACTGAGGC+CGG | + | chr7_4:24287427-24287446 | Msa1146550:intron | 50.0% | |
| ! | AGGCCGGTTCCTATGGAATT+CGG | + | chr7_4:24287443-24287462 | Msa1146550:intron | 50.0% |
| CATGGGACTGGACCTTCTAG+AGG | - | chr7_4:24282861-24282880 | None:intergenic | 55.0% | |
| CAAGCACGAGTCTTGGGACA+AGG | - | chr7_4:24282898-24282917 | None:intergenic | 55.0% | |
| CTTGTCCCAAGACTCGTGCT+TGG | + | chr7_4:24282896-24282915 | Msa1146550:intron | 55.0% | |
| TGTCCCAAGACTCGTGCTTG+GGG | + | chr7_4:24282898-24282917 | Msa1146550:intron | 55.0% | |
| GGCTTAGAAGCCCTCCAGAA+AGG | + | chr7_4:24282949-24282968 | Msa1146550:intron | 55.0% | |
| TGCTTGGTTCCCAAGCAACC+GGG | - | chr7_4:24283103-24283122 | None:intergenic | 55.0% | |
| CCCGACAACTCAATGGTGTG+TGG | - | chr7_4:24283398-24283417 | None:intergenic | 55.0% | |
| AGTCGAAGGAGGGAGAAGAG+AGG | - | chr7_4:24283468-24283487 | None:intergenic | 55.0% | |
| CAAGCCCAGCTACAACTGTG+CGG | - | chr7_4:24283976-24283995 | None:intergenic | 55.0% | |
| AGGGCCGCAAGTATAAGAGC+AGG | + | chr7_4:24284451-24284470 | Msa1146550:intron | 55.0% | |
| !! | GAATAGTGGGGGCACTAGTG+GGG | + | chr7_4:24285510-24285529 | Msa1146550:intron | 55.0% |
| !! | AATAGTGGGGGCACTAGTGG+GGG | + | chr7_4:24285511-24285530 | Msa1146550:intron | 55.0% |
| GGTAACCCGACCTACATGAC+TGG | + | chr7_4:24287218-24287237 | Msa1146550:intron | 55.0% | |
| ! | GGCCGGTTCCTATGGAATTC+GGG | + | chr7_4:24287444-24287463 | Msa1146550:intron | 55.0% |
| ! | GCCGGTTCCTATGGAATTCG+GGG | + | chr7_4:24287445-24287464 | Msa1146550:intron | 55.0% |
| GCCCCGAATTCCATAGGAAC+CGG | - | chr7_4:24287449-24287468 | None:intergenic | 55.0% | |
| CGTGCATGGCCATAAACGCA+CGG | + | chr7_4:24287504-24287523 | Msa1146550:intron | 55.0% | |
| GTGCATGGCCATAAACGCAC+GGG | + | chr7_4:24287505-24287524 | Msa1146550:intron | 55.0% | |
| GTCCCAAGACTCGTGCTTGG+GGG | + | chr7_4:24282899-24282918 | Msa1146550:intron | 60.0% | |
| TCCCAAGACTCGTGCTTGGG+GGG | + | chr7_4:24282900-24282919 | Msa1146550:intron | 60.0% | |
| GTCTCAGGAGCCCTTCTGGA+GGG | - | chr7_4:24283003-24283022 | None:intergenic | 60.0% | |
| AGTCTCAGGAGCCCTTCTGG+AGG | - | chr7_4:24283004-24283023 | None:intergenic | 60.0% | |
| CAGAGTCTCAGGAGCCCTTC+TGG | - | chr7_4:24283007-24283026 | None:intergenic | 60.0% | |
| CAGAAGGGCTCCTGAGACTC+TGG | + | chr7_4:24283005-24283024 | Msa1146550:intron | 60.0% | |
| GCTTGGTTCCCAAGCAACCG+GGG | - | chr7_4:24283102-24283121 | None:intergenic | 60.0% | |
| GGGCTTGGGTTTCGGTTGCT+TGG | - | chr7_4:24283119-24283138 | None:intergenic | 60.0% | |
| ! | GTTTTATCCTGGAGGCGGCG+TGG | + | chr7_4:24283995-24284014 | Msa1146550:intron | 60.0% |
| ! | GGAACTGAGGCCGGTTCCTA+TGG | + | chr7_4:24287436-24287455 | Msa1146550:intron | 60.0% |
| GCCCCCCAAGCACGAGTCTT+GGG | - | chr7_4:24282904-24282923 | None:intergenic | 65.0% | |
| AGCCCCCCAAGCACGAGTCT+TGG | - | chr7_4:24282905-24282924 | None:intergenic | 65.0% | |
| CCTAGAAGGGCGGTGCCTCA+AGG | - | chr7_4:24283039-24283058 | None:intergenic | 65.0% | |
| !! | CCTTGAGGCACCGCCCTTCT+AGG | + | chr7_4:24283036-24283055 | Msa1146550:intron | 65.0% |
| CTATCAACCACGCCGCCTCC+AGG | - | chr7_4:24284005-24284024 | None:intergenic | 65.0% | |
| GGGCGCCTGAGCCTTTCTGG+AGG | - | chr7_4:24282983-24283002 | None:intergenic | 70.0% | |
| !! | GGAGGGCGCCTGAGCCTTTC+TGG | - | chr7_4:24282986-24283005 | None:intergenic | 70.0% |
| AGGCTCAGGCGCCCTCCAGA+AGG | + | chr7_4:24282989-24283008 | Msa1146550:intron | 70.0% | |
| GGCTCAGGCGCCCTCCAGAA+GGG | + | chr7_4:24282990-24283009 | Msa1146550:intron | 70.0% | |
| ACTCTGGCGCGCTCGCCTTG+AGG | + | chr7_4:24283021-24283040 | Msa1146550:intron | 70.0% | |
| GGCGAGCGCGCCAGAGTCTC+AGG | - | chr7_4:24283018-24283037 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 24282076 | 24288493 | 24282076 | ID=Msa1146550;Name=Msa1146550 |
| chr7_4 | mRNA | 24282076 | 24288493 | 24282076 | ID=Msa1146550-mRNA-1;Parent=Msa1146550;Name=Msa1146550-mRNA-1;_AED=0.34;_eAED=0.48;_QI=0|0|0|0.75|0|0|4|0|118 |
| chr7_4 | exon | 24282076 | 24282126 | 24282076 | ID=Msa1146550-mRNA-1:exon:6066;Parent=Msa1146550-mRNA-1 |
| chr7_4 | exon | 24288077 | 24288173 | 24288077 | ID=Msa1146550-mRNA-1:exon:6067;Parent=Msa1146550-mRNA-1 |
| chr7_4 | exon | 24288200 | 24288367 | 24288200 | ID=Msa1146550-mRNA-1:exon:6068;Parent=Msa1146550-mRNA-1 |
| chr7_4 | exon | 24288453 | 24288493 | 24288453 | ID=Msa1146550-mRNA-1:exon:6069;Parent=Msa1146550-mRNA-1 |
| chr7_4 | CDS | 24282076 | 24282126 | 24282076 | ID=Msa1146550-mRNA-1:cds;Parent=Msa1146550-mRNA-1 |
| chr7_4 | CDS | 24288077 | 24288173 | 24288077 | ID=Msa1146550-mRNA-1:cds;Parent=Msa1146550-mRNA-1 |
| chr7_4 | CDS | 24288200 | 24288367 | 24288200 | ID=Msa1146550-mRNA-1:cds;Parent=Msa1146550-mRNA-1 |
| chr7_4 | CDS | 24288453 | 24288493 | 24288453 | ID=Msa1146550-mRNA-1:cds;Parent=Msa1146550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
