Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146570 | AES78893.2 | 60.177 | 226 | 35 | 2 | 9 | 179 | 99 | 324 | 1.53e-78 | 247 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146570 | G7KVW6 | 60.177 | 226 | 35 | 2 | 9 | 179 | 99 | 324 | 7.33e-79 | 247 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1146570 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146570 | MtrunA17_Chr7g0233561 | 60.177 | 226 | 35 | 2 | 9 | 179 | 104 | 329 | 1.54e-82 | 247 |
| Msa1146570 | MtrunA17_Chr7g0233541 | 56.388 | 227 | 42 | 4 | 9 | 179 | 72 | 297 | 4.06e-74 | 224 |
| Msa1146570 | MtrunA17_Chr3g0131891 | 51.754 | 228 | 53 | 2 | 3 | 179 | 99 | 320 | 5.81e-65 | 202 |
| Msa1146570 | MtrunA17_Chr7g0233531 | 54.630 | 216 | 46 | 4 | 9 | 179 | 72 | 280 | 3.82e-63 | 196 |
| Msa1146570 | MtrunA17_Chr7g0233521 | 50.446 | 224 | 43 | 3 | 9 | 179 | 72 | 280 | 1.43e-60 | 189 |
| Msa1146570 | MtrunA17_Chr7g0233571 | 56.757 | 74 | 29 | 1 | 8 | 78 | 95 | 168 | 9.54e-17 | 74.7 |
| Msa1146570 | MtrunA17_Chr1g0163071 | 42.222 | 90 | 42 | 3 | 80 | 169 | 215 | 294 | 3.32e-14 | 68.9 |
| Msa1146570 | MtrunA17_Chr8g0390841 | 44.048 | 84 | 36 | 3 | 80 | 162 | 258 | 331 | 7.45e-11 | 60.1 |
| Msa1146570 | MtrunA17_Chr1g0208771 | 38.824 | 85 | 41 | 3 | 79 | 162 | 216 | 290 | 9.57e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 31 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCATCAACAATGTGAAAT+TGG | 0.209794 | 7_4:+24352380 | Msa1146570:CDS |
| AAATTTGAGGTACAAATCTT+TGG | 0.253897 | 7_4:+24352221 | Msa1146570:intron |
| GAGAGGAGATATTCAACTTC+AGG | 0.365011 | 7_4:+24358026 | Msa1146570:CDS |
| AGGTGTTGAATGGGATAGTT+TGG | 0.372373 | 7_4:+24358046 | Msa1146570:CDS |
| ATTGTTTAACATTTCAAAGT+AGG | 0.415322 | 7_4:+24358253 | Msa1146570:CDS |
| CAATGAGTGATGGCAAGATA+TGG | 0.428994 | 7_4:+24352114 | None:intergenic |
| AATCTTTGGAAAGAGTGCTT+TGG | 0.429279 | 7_4:+24352235 | Msa1146570:CDS |
| ATTCAACTTCAGGTGTTGAA+TGG | 0.430462 | 7_4:+24358036 | Msa1146570:CDS |
| CAAAAGAGTTGAAGCTAAGA+AGG | 0.446593 | 7_4:+24352274 | Msa1146570:CDS |
| TTCAACTTCAGGTGTTGAAT+GGG | 0.452259 | 7_4:+24358037 | Msa1146570:CDS |
| TCTATCAAGATGTGCGCTAA+AGG | 0.472332 | 7_4:+24358081 | Msa1146570:CDS |
| ATCGTAGAGCAGCTCAAAAG+AGG | 0.489984 | 7_4:+24352336 | Msa1146570:CDS |
| AAGGACAATAACTTGAAAGT+TGG | 0.499244 | 7_4:+24358144 | Msa1146570:CDS |
| AGGTTTATTTCCTTGACCAT+TGG | 0.505200 | 7_4:-24352300 | None:intergenic |
| ATGGGATAGTTTGGTCTGCT+AGG | 0.511420 | 7_4:+24358055 | Msa1146570:CDS |
| TCTAAAGATATGAACAATGA+AGG | 0.545794 | 7_4:-24358208 | None:intergenic |
| TGGCAAGATATGGTTTGAGA+AGG | 0.555350 | 7_4:+24352124 | Msa1146570:CDS |
| CTAAAATTTGAACTCACAAG+TGG | 0.566527 | 7_4:+24358105 | Msa1146570:CDS |
| TGAACTCACAAGTGGATGGA+AGG | 0.567593 | 7_4:+24358113 | Msa1146570:CDS |
| ACATTGTTGATGAAATTCAA+AGG | 0.586074 | 7_4:-24352372 | None:intergenic |
| AGCAGTAGTTGTGTAAAACA+TGG | 0.593692 | 7_4:+24352404 | Msa1146570:CDS |
| AATTTGAACTCACAAGTGGA+TGG | 0.599548 | 7_4:+24358109 | Msa1146570:CDS |
| AAGAAGGTCTCCAATGGTCA+AGG | 0.600566 | 7_4:+24352290 | Msa1146570:CDS |
| TTTGATTTGAATAAGAAGAG+AGG | 0.602796 | 7_4:+24358009 | Msa1146570:CDS |
| GGCAAGATATGGTTTGAGAA+GGG | 0.606783 | 7_4:+24352125 | Msa1146570:CDS |
| AAAGTGTTTCTTACAAAACA+AGG | 0.608748 | 7_4:-24357989 | None:intergenic |
| TGTTTCTTACAAAACAAGGA+TGG | 0.638147 | 7_4:-24357985 | None:intergenic |
| TGGATGGAAGGCATTTGCAA+AGG | 0.640290 | 7_4:+24358125 | Msa1146570:CDS |
| GAAGCTAAGAAGGTCTCCAA+TGG | 0.650536 | 7_4:+24352284 | Msa1146570:CDS |
| AAAACATGGAAAATCACAGA+AGG | 0.656002 | 7_4:+24352418 | Msa1146570:CDS |
| TTGTTGATGAAATTCAAAGG+AGG | 0.689383 | 7_4:-24352369 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATTATT+TGG | + | chr7_4:24352967-24352986 | Msa1146570:intron | 0.0% |
| !!! | ATATTATCATTTTTATTTTC+TGG | + | chr7_4:24352558-24352577 | Msa1146570:intron | 10.0% |
| !!! | GTACTAAATATAATATATTT+TGG | + | chr7_4:24353136-24353155 | Msa1146570:intron | 10.0% |
| !!! | AATTAATATCATATTTGTTT+TGG | - | chr7_4:24354379-24354398 | None:intergenic | 10.0% |
| !!! | AAAATATTTTTGCAAAACTT+GGG | - | chr7_4:24353047-24353066 | None:intergenic | 15.0% |
| !! | ATTTATCCTTAATGTATTTA+GGG | - | chr7_4:24354119-24354138 | None:intergenic | 15.0% |
| !!! | AATATCATTTTATCATTTCT+AGG | - | chr7_4:24355032-24355051 | None:intergenic | 15.0% |
| !! | AAGTTAGATAATTATTTGTA+TGG | + | chr7_4:24356046-24356065 | Msa1146570:intron | 15.0% |
| !!! | GGTGTTTTTATTTTTATTTT+TGG | - | chr7_4:24357903-24357922 | None:intergenic | 15.0% |
| !! | CTTTAATTAACTTAAACAGT+TGG | + | chr7_4:24352641-24352660 | Msa1146570:intron | 20.0% |
| !! | CAACATATGATATGAATTTA+AGG | - | chr7_4:24352724-24352743 | None:intergenic | 20.0% |
| !! | CTTAAATTCATATCATATGT+TGG | + | chr7_4:24352722-24352741 | Msa1146570:intron | 20.0% |
| !! | ATTAGTAGTGTTTATATAGT+GGG | + | chr7_4:24352856-24352875 | Msa1146570:intron | 20.0% |
| !!! | CAAAATATTTTTGCAAAACT+TGG | - | chr7_4:24353048-24353067 | None:intergenic | 20.0% |
| !!! | ACTTGATCTGAAATATATTT+AGG | + | chr7_4:24353092-24353111 | Msa1146570:intron | 20.0% |
| !!! | TCACAATATTTTTCTATTTG+AGG | + | chr7_4:24353639-24353658 | Msa1146570:intron | 20.0% |
| !! | GTATTATTACCATTCTATTA+TGG | - | chr7_4:24353771-24353790 | None:intergenic | 20.0% |
| !! | GTAATAATACCATATTAAAG+TGG | + | chr7_4:24353781-24353800 | Msa1146570:intron | 20.0% |
| !! | GATTTATCCTTAATGTATTT+AGG | - | chr7_4:24354120-24354139 | None:intergenic | 20.0% |
| !! | ACACTAAAAAATTCACAATA+CGG | + | chr7_4:24354198-24354217 | Msa1146570:intron | 20.0% |
| !!! | TTTCAATATAGGACTTTTTA+GGG | - | chr7_4:24354264-24354283 | None:intergenic | 20.0% |
| !!! | TTTTCAATATAGGACTTTTT+AGG | - | chr7_4:24354265-24354284 | None:intergenic | 20.0% |
| !!! | GTTGTACTTTTATTATTGAA+AGG | + | chr7_4:24354518-24354537 | Msa1146570:intron | 20.0% |
| !! | TTATTGCACAATTATAGATT+TGG | - | chr7_4:24354628-24354647 | None:intergenic | 20.0% |
| !! | AATCTATAATTGTGCAATAA+AGG | + | chr7_4:24354628-24354647 | Msa1146570:intron | 20.0% |
| !!! | AATTTTAAACTTGAGTAACT+TGG | + | chr7_4:24354863-24354882 | Msa1146570:intron | 20.0% |
| !! | TTATAAATAACGAAGCATAT+AGG | + | chr7_4:24355310-24355329 | Msa1146570:intron | 20.0% |
| !!! | ATGAATCACTAAAATTTTTC+AGG | - | chr7_4:24356005-24356024 | None:intergenic | 20.0% |
| !!! | TGAAAAATTTTAGTGATTCA+TGG | + | chr7_4:24356004-24356023 | Msa1146570:intron | 20.0% |
| !! | AATATATGATTGCAAGTTTA+CGG | - | chr7_4:24356383-24356402 | None:intergenic | 20.0% |
| !! | TTAGAATACACATTATGAAA+AGG | + | chr7_4:24357433-24357452 | Msa1146570:intron | 20.0% |
| !! | TTGTTTACTAGAAAATCTTA+TGG | + | chr7_4:24357561-24357580 | Msa1146570:intron | 20.0% |
| !!! | AACCATTTTTTAAATTCAAG+TGG | + | chr7_4:24357608-24357627 | Msa1146570:intron | 20.0% |
| !!! | ACCATTTTTTAAATTCAAGT+GGG | + | chr7_4:24357609-24357628 | Msa1146570:intron | 20.0% |
| !! | TGGAAAGAAAAAAAAAACAA+GGG | - | chr7_4:24357925-24357944 | None:intergenic | 20.0% |
| !! | ATGGAAAGAAAAAAAAAACA+AGG | - | chr7_4:24357926-24357945 | None:intergenic | 20.0% |
| !! | ATTGTTTAACATTTCAAAGT+AGG | + | chr7_4:24358253-24358272 | Msa1146570:CDS | 20.0% |
| ! | TGAAAAAACTTCCAAATTTG+AGG | + | chr7_4:24352208-24352227 | Msa1146570:intron | 25.0% |
| ! | AAAGATTTGTACCTCAAATT+TGG | - | chr7_4:24352222-24352241 | None:intergenic | 25.0% |
| !! | AAATTTGAGGTACAAATCTT+TGG | + | chr7_4:24352221-24352240 | Msa1146570:intron | 25.0% |
| !! | ACATTGTTGATGAAATTCAA+AGG | - | chr7_4:24352375-24352394 | None:intergenic | 25.0% |
| ! | TTTCATCAACAATGTGAAAT+TGG | + | chr7_4:24352380-24352399 | Msa1146570:CDS | 25.0% |
| !!! | TTTTATTTTCTGGAGTGATA+AGG | + | chr7_4:24352568-24352587 | Msa1146570:intron | 25.0% |
| !!! | TTTATTTTCTGGAGTGATAA+GGG | + | chr7_4:24352569-24352588 | Msa1146570:intron | 25.0% |
| ! | CATTAGTAGTGTTTATATAG+TGG | + | chr7_4:24352855-24352874 | Msa1146570:intron | 25.0% |
| ! | TTAGTAGTGTTTATATAGTG+GGG | + | chr7_4:24352857-24352876 | Msa1146570:intron | 25.0% |
| ! | ACTAATAAGTGAGAAACTTT+GGG | - | chr7_4:24353235-24353254 | None:intergenic | 25.0% |
| ! | AACTAATAAGTGAGAAACTT+TGG | - | chr7_4:24353236-24353255 | None:intergenic | 25.0% |
| ! | GGACATTATTATTCCAAATA+GGG | - | chr7_4:24353579-24353598 | None:intergenic | 25.0% |
| !! | TTTTTCTATTTGAGGAGAAA+TGG | + | chr7_4:24353647-24353666 | Msa1146570:intron | 25.0% |
| !! | ATTGTACCATATTGATAGTT+TGG | + | chr7_4:24353694-24353713 | Msa1146570:intron | 25.0% |
| !!! | CGTCTTAAAATTGTTGTTTT+TGG | - | chr7_4:24354045-24354064 | None:intergenic | 25.0% |
| !! | TGAACCATTGTCAATTTTTA+TGG | - | chr7_4:24354298-24354317 | None:intergenic | 25.0% |
| ! | CATAAACATTGTTTACTGAA+TGG | - | chr7_4:24354435-24354454 | None:intergenic | 25.0% |
| !!! | TTATAGATTTGGAGTTTTTG+TGG | - | chr7_4:24354617-24354636 | None:intergenic | 25.0% |
| ! | GTGCAATAAAGGAAAATAAA+TGG | + | chr7_4:24354639-24354658 | Msa1146570:intron | 25.0% |
| ! | ATTGTCTAGTCATATAACTT+TGG | - | chr7_4:24354897-24354916 | None:intergenic | 25.0% |
| ! | ATTATGATATGTGAACTTGA+TGG | + | chr7_4:24354999-24355018 | Msa1146570:intron | 25.0% |
| !! | GAATTTTTGTTCTTAGACTT+GGG | - | chr7_4:24355151-24355170 | None:intergenic | 25.0% |
| !! | AGAATTTTTGTTCTTAGACT+TGG | - | chr7_4:24355152-24355171 | None:intergenic | 25.0% |
| ! | AGTTCAAAATTAAGACAAGT+TGG | - | chr7_4:24355204-24355223 | None:intergenic | 25.0% |
| !! | ACTTGTCTTAATTTTGAACT+TGG | + | chr7_4:24355204-24355223 | Msa1146570:intron | 25.0% |
| !! | CTTGTCTTAATTTTGAACTT+GGG | + | chr7_4:24355205-24355224 | Msa1146570:intron | 25.0% |
| ! | TTATGACCTAAATGTTAAAG+TGG | + | chr7_4:24355335-24355354 | Msa1146570:intron | 25.0% |
| !! | CACTATTCTTTAATTTACAG+GGG | - | chr7_4:24355400-24355419 | None:intergenic | 25.0% |
| !! | CCACTATTCTTTAATTTACA+GGG | - | chr7_4:24355401-24355420 | None:intergenic | 25.0% |
| ! | CCTGTAAATTAAAGAATAGT+GGG | + | chr7_4:24355399-24355418 | Msa1146570:intron | 25.0% |
| ! | CTGTAAATTAAAGAATAGTG+GGG | + | chr7_4:24355400-24355419 | Msa1146570:intron | 25.0% |
| ! | TGTAAATTAAAGAATAGTGG+GGG | + | chr7_4:24355401-24355420 | Msa1146570:intron | 25.0% |
| !! | ACTAGTTCTTAATATACAAG+GGG | - | chr7_4:24355450-24355469 | None:intergenic | 25.0% |
| !! | CACTAGTTCTTAATATACAA+GGG | - | chr7_4:24355451-24355470 | None:intergenic | 25.0% |
| ! | CTTGTATATTAAGAACTAGT+GGG | + | chr7_4:24355450-24355469 | Msa1146570:intron | 25.0% |
| ! | TTGTATATTAAGAACTAGTG+GGG | + | chr7_4:24355451-24355470 | Msa1146570:intron | 25.0% |
| ! | TATGAACTTGGTTTATACAT+TGG | + | chr7_4:24355578-24355597 | Msa1146570:intron | 25.0% |
| ! | ATGAGGATATAACTTCTTTA+AGG | - | chr7_4:24355620-24355639 | None:intergenic | 25.0% |
| ! | TAAAGAAGTTATATCCTCAT+TGG | + | chr7_4:24355620-24355639 | Msa1146570:intron | 25.0% |
| ! | AAAAAGAAACTAAAACCTGA+TGG | + | chr7_4:24355764-24355783 | Msa1146570:intron | 25.0% |
| ! | ACTAGAAGAAGAAATCTATA+TGG | + | chr7_4:24355974-24355993 | Msa1146570:intron | 25.0% |
| !! | TGGTCTAAAATAAACTCTTA+AGG | + | chr7_4:24356066-24356085 | Msa1146570:intron | 25.0% |
| ! | CTTTGTGAGATTTATCAAAA+AGG | - | chr7_4:24356327-24356346 | None:intergenic | 25.0% |
| ! | TTAGAATCATAGTCTTCTTA+AGG | - | chr7_4:24356592-24356611 | None:intergenic | 25.0% |
| ! | AGTAACCTATTGTACTTAAA+TGG | + | chr7_4:24356627-24356646 | Msa1146570:intron | 25.0% |
| ! | TTGTACCATTTAAGTACAAT+AGG | - | chr7_4:24356635-24356654 | None:intergenic | 25.0% |
| ! | TTAGTAATTCCTTTCATCAA+AGG | - | chr7_4:24357041-24357060 | None:intergenic | 25.0% |
| ! | AAATTCTGATTAACATGAGT+TGG | - | chr7_4:24357503-24357522 | None:intergenic | 25.0% |
| !!! | CCATTTTTTAAATTCAAGTG+GGG | + | chr7_4:24357610-24357629 | Msa1146570:intron | 25.0% |
| !!! | CATTTTTTAAATTCAAGTGG+GGG | + | chr7_4:24357611-24357630 | Msa1146570:intron | 25.0% |
| ! | GGAAAGAAAAAAAAAACAAG+GGG | - | chr7_4:24357924-24357943 | None:intergenic | 25.0% |
| !! | AAAATGCAAATGTTGATGAA+TGG | - | chr7_4:24357945-24357964 | None:intergenic | 25.0% |
| !! | CATTTGCATTTTCTATTGTT+TGG | + | chr7_4:24357953-24357972 | Msa1146570:intron | 25.0% |
| !! | AAAGTGTTTCTTACAAAACA+AGG | - | chr7_4:24357992-24358011 | None:intergenic | 25.0% |
| !!! | TTTGATTTGAATAAGAAGAG+AGG | + | chr7_4:24358009-24358028 | Msa1146570:CDS | 25.0% |
| ! | TCTAAAGATATGAACAATGA+AGG | - | chr7_4:24358211-24358230 | None:intergenic | 25.0% |
| ! | TTGTTGATGAAATTCAAAGG+AGG | - | chr7_4:24352372-24352391 | None:intergenic | 30.0% |
| AAAACATGGAAAATCACAGA+AGG | + | chr7_4:24352418-24352437 | Msa1146570:CDS | 30.0% | |
| CAAATTGATAGAATGTCCAA+AGG | + | chr7_4:24352452-24352471 | Msa1146570:intron | 30.0% | |
| GTCATAAAATCGTATACCTT+TGG | - | chr7_4:24352471-24352490 | None:intergenic | 30.0% | |
| TAAACACAAATTCCCATGTT+GGG | + | chr7_4:24352773-24352792 | Msa1146570:intron | 30.0% | |
| GTGATGTGAATTGAAAAAAG+TGG | + | chr7_4:24352806-24352825 | Msa1146570:intron | 30.0% | |
| TAGTAGTGTTTATATAGTGG+GGG | + | chr7_4:24352858-24352877 | Msa1146570:intron | 30.0% | |
| TTCTATAAATAGAGAGCTCA+CGG | + | chr7_4:24353265-24353284 | Msa1146570:intron | 30.0% | |
| TCTTAAAAACATAGTCCCTT+CGG | + | chr7_4:24353508-24353527 | Msa1146570:intron | 30.0% | |
| ! | AAAGTACTCTTTATTCCGAA+GGG | - | chr7_4:24353544-24353563 | None:intergenic | 30.0% |
| !! | AAAAGTACTCTTTATTCCGA+AGG | - | chr7_4:24353545-24353564 | None:intergenic | 30.0% |
| TTAAGATCATAGTCCCTATT+TGG | + | chr7_4:24353563-24353582 | Msa1146570:intron | 30.0% | |
| GGGACATTATTATTCCAAAT+AGG | - | chr7_4:24353580-24353599 | None:intergenic | 30.0% | |
| GGAATCAAGAATGATCTTAA+CGG | + | chr7_4:24353603-24353622 | Msa1146570:intron | 30.0% | |
| AGTTCTCCAAACTATCAATA+TGG | - | chr7_4:24353703-24353722 | None:intergenic | 30.0% | |
| TGATAGTTTGGAGAACTTAA+AGG | + | chr7_4:24353706-24353725 | Msa1146570:intron | 30.0% | |
| GTACTAAGACCACTTTAATA+TGG | - | chr7_4:24353793-24353812 | None:intergenic | 30.0% | |
| GAGAATTACACCTTCAAATA+TGG | - | chr7_4:24353815-24353834 | None:intergenic | 30.0% | |
| CTTCGGTAGATAATAGAATT+TGG | + | chr7_4:24353993-24354012 | Msa1146570:intron | 30.0% | |
| GAAATCCAAATACAACAGTT+TGG | + | chr7_4:24354015-24354034 | Msa1146570:intron | 30.0% | |
| GATTTCCAAACTGTTGTATT+TGG | - | chr7_4:24354023-24354042 | None:intergenic | 30.0% | |
| ACCTCAATAAGTAACTTCTT+CGG | - | chr7_4:24354088-24354107 | None:intergenic | 30.0% | |
| AGTTGTCCCTAAATACATTA+AGG | + | chr7_4:24354110-24354129 | Msa1146570:intron | 30.0% | |
| !! | TGGCTGCTTATTTTCAATAT+AGG | - | chr7_4:24354275-24354294 | None:intergenic | 30.0% |
| ! | ACCATTGTCAATTTTTATGG+TGG | - | chr7_4:24354295-24354314 | None:intergenic | 30.0% |
| ! | GAAACTTCACAATCAGATTT+TGG | + | chr7_4:24354548-24354567 | Msa1146570:intron | 30.0% |
| AATCACACGACTAAAATAGA+AGG | - | chr7_4:24354815-24354834 | None:intergenic | 30.0% | |
| TCTGAACTATATTTGGATTC+TGG | + | chr7_4:24355232-24355251 | Msa1146570:intron | 30.0% | |
| CCTAATGAATACACATTCAT+AGG | - | chr7_4:24355286-24355305 | None:intergenic | 30.0% | |
| CCTATGAATGTGTATTCATT+AGG | + | chr7_4:24355283-24355302 | Msa1146570:intron | 30.0% | |
| CTATGACCACTTTAACATTT+AGG | - | chr7_4:24355344-24355363 | None:intergenic | 30.0% | |
| CCCTGTAAATTAAAGAATAG+TGG | + | chr7_4:24355398-24355417 | Msa1146570:intron | 30.0% | |
| ! | CCCACTATTCTTTAATTTAC+AGG | - | chr7_4:24355402-24355421 | None:intergenic | 30.0% |
| ! | CCACTAGTTCTTAATATACA+AGG | - | chr7_4:24355452-24355471 | None:intergenic | 30.0% |
| CCTTGTATATTAAGAACTAG+TGG | + | chr7_4:24355449-24355468 | Msa1146570:intron | 30.0% | |
| TGTATATTAAGAACTAGTGG+GGG | + | chr7_4:24355452-24355471 | Msa1146570:intron | 30.0% | |
| ! | ATAGCTAAAGAGTATGAACT+TGG | + | chr7_4:24355566-24355585 | Msa1146570:intron | 30.0% |
| AGAAGCAATAAACGATGAAA+TGG | + | chr7_4:24355659-24355678 | Msa1146570:intron | 30.0% | |
| AAAATCCAAATACAACCGTT+TGG | - | chr7_4:24355742-24355761 | None:intergenic | 30.0% | |
| ! | AAACGGTTGTATTTGGATTT+TGG | + | chr7_4:24355741-24355760 | Msa1146570:intron | 30.0% |
| !! | TTCTAAAACCTTTGACTACA+AGG | - | chr7_4:24355814-24355833 | None:intergenic | 30.0% |
| ATGGATATGATTATAGTGAC+TGG | - | chr7_4:24355874-24355893 | None:intergenic | 30.0% | |
| !! | TGTGAAAGTTGCCTTATTTA+TGG | + | chr7_4:24355948-24355967 | Msa1146570:intron | 30.0% |
| !! | CTTCTAGTTCACCATAAATA+AGG | - | chr7_4:24355962-24355981 | None:intergenic | 30.0% |
| GAATTACTTCAACTTTGTCT+AGG | - | chr7_4:24356271-24356290 | None:intergenic | 30.0% | |
| GACAAAGTTGAAGTAATTCT+TGG | + | chr7_4:24356272-24356291 | Msa1146570:intron | 30.0% | |
| ACAAAGTTGAGAAGATCTTA+AGG | + | chr7_4:24356341-24356360 | Msa1146570:intron | 30.0% | |
| !! | GATTCTAAGATTACTTCACT+AGG | + | chr7_4:24356604-24356623 | Msa1146570:intron | 30.0% |
| ! | CAAATTAACACTTCTGGAAA+CGG | - | chr7_4:24356860-24356879 | None:intergenic | 30.0% |
| TCACAACAAATTAACACTTC+TGG | - | chr7_4:24356866-24356885 | None:intergenic | 30.0% | |
| TTAGTCAATCCTTTGATGAA+AGG | + | chr7_4:24357029-24357048 | Msa1146570:intron | 30.0% | |
| ATTATGAAAAGGTTTGTGTG+TGG | + | chr7_4:24357444-24357463 | Msa1146570:intron | 30.0% | |
| TTATGAAAAGGTTTGTGTGT+GGG | + | chr7_4:24357445-24357464 | Msa1146570:intron | 30.0% | |
| CCCCACTTGAATTTAAAAAA+TGG | - | chr7_4:24357613-24357632 | None:intergenic | 30.0% | |
| GTAATCACATGTGTCAATAT+CGG | - | chr7_4:24357658-24357677 | None:intergenic | 30.0% | |
| ! | ATCAATTTTACCGTGACAAT+TGG | - | chr7_4:24357762-24357781 | None:intergenic | 30.0% |
| !! | TTTTTGGTGATCAAAAGACT+GGG | - | chr7_4:24357887-24357906 | None:intergenic | 30.0% |
| !!! | ATTTTTGGTGATCAAAAGAC+TGG | - | chr7_4:24357888-24357907 | None:intergenic | 30.0% |
| TGTTTCTTACAAAACAAGGA+TGG | - | chr7_4:24357988-24358007 | None:intergenic | 30.0% | |
| CTAAAATTTGAACTCACAAG+TGG | + | chr7_4:24358105-24358124 | Msa1146570:CDS | 30.0% | |
| AAGGACAATAACTTGAAAGT+TGG | + | chr7_4:24358144-24358163 | Msa1146570:CDS | 30.0% | |
| !! | AATCTTTGGAAAGAGTGCTT+TGG | + | chr7_4:24352235-24352254 | Msa1146570:CDS | 35.0% |
| CAAAAGAGTTGAAGCTAAGA+AGG | + | chr7_4:24352274-24352293 | Msa1146570:CDS | 35.0% | |
| AGGTTTATTTCCTTGACCAT+TGG | - | chr7_4:24352303-24352322 | None:intergenic | 35.0% | |
| !!! | GCTCTACGATTTTTAGCATT+CGG | - | chr7_4:24352326-24352345 | None:intergenic | 35.0% |
| AGCAGTAGTTGTGTAAAACA+TGG | + | chr7_4:24352404-24352423 | Msa1146570:CDS | 35.0% | |
| TATGACTTCTTCATTGTGTC+AGG | + | chr7_4:24352485-24352504 | Msa1146570:intron | 35.0% | |
| CTAAACACAAATTCCCATGT+TGG | + | chr7_4:24352772-24352791 | Msa1146570:intron | 35.0% | |
| AAAAAGTGGAAGTCTCACAT+CGG | + | chr7_4:24352820-24352839 | Msa1146570:intron | 35.0% | |
| TATGTACCCCCATTAATTAG+AGG | - | chr7_4:24352888-24352907 | None:intergenic | 35.0% | |
| ! | AAAGAGTTTCCTTGAGTTGT+CGG | + | chr7_4:24353303-24353322 | Msa1146570:intron | 35.0% |
| TTGTTAAACAAGTCGAAGGA+GGG | - | chr7_4:24353387-24353406 | None:intergenic | 35.0% | |
| AAAGGAGTAGAAAAAGGAGA+AGG | - | chr7_4:24353412-24353431 | None:intergenic | 35.0% | |
| AAGGGACATTATACCGAATA+GGG | - | chr7_4:24353473-24353492 | None:intergenic | 35.0% | |
| TATTCGGTATAATGTCCCTT+CGG | + | chr7_4:24353473-24353492 | Msa1146570:intron | 35.0% | |
| AGACCTTTCTTAATTCCGAA+GGG | - | chr7_4:24353491-24353510 | None:intergenic | 35.0% | |
| AAGACCTTTCTTAATTCCGA+AGG | - | chr7_4:24353492-24353511 | None:intergenic | 35.0% | |
| AAGGGACATATATTACCGAA+GGG | - | chr7_4:24353526-24353545 | None:intergenic | 35.0% | |
| TTCGGTAATATATGTCCCTT+CGG | + | chr7_4:24353526-24353545 | Msa1146570:intron | 35.0% | |
| TTGGAATAATAATGTCCCGT+CGG | + | chr7_4:24353582-24353601 | Msa1146570:intron | 35.0% | |
| AAGATCATTCTTGATTCCGA+CGG | - | chr7_4:24353601-24353620 | None:intergenic | 35.0% | |
| TTCTATTTGAGGAGAAATGG+TGG | + | chr7_4:24353650-24353669 | Msa1146570:intron | 35.0% | |
| GTGGTAACACTATATTTGAG+TGG | + | chr7_4:24353669-24353688 | Msa1146570:intron | 35.0% | |
| GGAGAACTTAAAGGTTAGAA+TGG | + | chr7_4:24353715-24353734 | Msa1146570:intron | 35.0% | |
| GAACTTAAAGGTTAGAATGG+TGG | + | chr7_4:24353718-24353737 | Msa1146570:intron | 35.0% | |
| GTCTTAGCACCATAATAGAA+TGG | + | chr7_4:24353759-24353778 | Msa1146570:intron | 35.0% | |
| GGTCTTAGTACCATATTTGA+AGG | + | chr7_4:24353802-24353821 | Msa1146570:intron | 35.0% | |
| ! | TTGAAGGTGTAATTCTCGAA+CGG | + | chr7_4:24353818-24353837 | Msa1146570:intron | 35.0% |
| ! | AATTCTCGAACGGTTTTCTA+CGG | + | chr7_4:24353828-24353847 | Msa1146570:intron | 35.0% |
| !!! | TAGCTGAACTTGTTTTATCC+TGG | + | chr7_4:24353874-24353893 | Msa1146570:intron | 35.0% |
| ! | TAGTCTACCTTGCACAATTT+TGG | + | chr7_4:24353912-24353931 | Msa1146570:intron | 35.0% |
| ! | AGTCTACCTTGCACAATTTT+GGG | + | chr7_4:24353913-24353932 | Msa1146570:intron | 35.0% |
| ACTCAACCTAGTAACAACTT+CGG | + | chr7_4:24353976-24353995 | Msa1146570:intron | 35.0% | |
| TATCTACCGAAGTTGTTACT+AGG | - | chr7_4:24353985-24354004 | None:intergenic | 35.0% | |
| ACCGAAGAAGTTACTTATTG+AGG | + | chr7_4:24354084-24354103 | Msa1146570:intron | 35.0% | |
| ACTCTAATTGCCAAGAGAAT+AGG | + | chr7_4:24354236-24354255 | Msa1146570:intron | 35.0% | |
| !!! | TTTTAGGGTTCCTATTCTCT+TGG | - | chr7_4:24354249-24354268 | None:intergenic | 35.0% |
| GCCACCATAAAAATTGACAA+TGG | + | chr7_4:24354291-24354310 | Msa1146570:intron | 35.0% | |
| TTGTGCAAAACCAAGTCATA+AGG | + | chr7_4:24354330-24354349 | Msa1146570:intron | 35.0% | |
| TGTGCAAAACCAAGTCATAA+GGG | + | chr7_4:24354331-24354350 | Msa1146570:intron | 35.0% | |
| GGGATTGTCTGAACTATATT+TGG | + | chr7_4:24355225-24355244 | Msa1146570:intron | 35.0% | |
| GATGTTATAGAACCTCAAAG+AGG | + | chr7_4:24355530-24355549 | Msa1146570:intron | 35.0% | |
| GTCTAACAAAACATGACACT+TGG | + | chr7_4:24355692-24355711 | Msa1146570:intron | 35.0% | |
| CTCATAGTTGCAAAACCAAA+CGG | + | chr7_4:24355724-24355743 | Msa1146570:intron | 35.0% | |
| CAAAACCAAACGGTTGTATT+TGG | + | chr7_4:24355734-24355753 | Msa1146570:intron | 35.0% | |
| GAAACTAAAACCTGATGGTA+AGG | + | chr7_4:24355769-24355788 | Msa1146570:intron | 35.0% | |
| TATTCATCAACCTTACCATC+AGG | - | chr7_4:24355782-24355801 | None:intergenic | 35.0% | |
| !! | TGGTAAGGTTGATGAATACA+AGG | + | chr7_4:24355784-24355803 | Msa1146570:intron | 35.0% |
| ! | TAAAGGGACTAGTACTCTTA+TGG | - | chr7_4:24355893-24355912 | None:intergenic | 35.0% |
| GAGTACTATCGAGTTATGAA+CGG | - | chr7_4:24355920-24355939 | None:intergenic | 35.0% | |
| TAACTCGATAGTACTCCAAA+TGG | + | chr7_4:24355924-24355943 | Msa1146570:intron | 35.0% | |
| GATTCATGGACAAGAAAACA+AGG | + | chr7_4:24356018-24356037 | Msa1146570:intron | 35.0% | |
| ATCTCAAGTGTTCTAACACT+TGG | - | chr7_4:24356411-24356430 | None:intergenic | 35.0% | |
| GCACAATAATTTCACGACAT+CGG | - | chr7_4:24356511-24356530 | None:intergenic | 35.0% | |
| TGTGCAAGTTTACTAGTAGA+CGG | + | chr7_4:24356526-24356545 | Msa1146570:intron | 35.0% | |
| TCATGACTCTTTCTATAGCA+TGG | - | chr7_4:24356565-24356584 | None:intergenic | 35.0% | |
| ATGCTATAGAAAGAGTCATG+AGG | + | chr7_4:24356564-24356583 | Msa1146570:intron | 35.0% | |
| ATCTCAGATTCATTCCATAG+TGG | - | chr7_4:24356762-24356781 | None:intergenic | 35.0% | |
| AGAACACTAGAGAAAACTAG+TGG | + | chr7_4:24356783-24356802 | Msa1146570:intron | 35.0% | |
| !! | GAAACGGTTTTATCCACTAA+GGG | - | chr7_4:24356844-24356863 | None:intergenic | 35.0% |
| ATTGAGAATCGTTACCACAA+TGG | + | chr7_4:24356907-24356926 | Msa1146570:intron | 35.0% | |
| GTCACGAACACATAAAGTAT+TGG | + | chr7_4:24356947-24356966 | Msa1146570:intron | 35.0% | |
| AAGTCCTAAACACATCCAAT+AGG | + | chr7_4:24357066-24357085 | Msa1146570:intron | 35.0% | |
| CTAAACACATCCAATAGGAT+GGG | + | chr7_4:24357071-24357090 | Msa1146570:intron | 35.0% | |
| ATCCCAAGAAATAGGTTCAA+TGG | + | chr7_4:24357145-24357164 | Msa1146570:intron | 35.0% | |
| TCCCAAGAAATAGGTTCAAT+GGG | + | chr7_4:24357146-24357165 | Msa1146570:intron | 35.0% | |
| ! | ACCCATTGAACCTATTTCTT+GGG | - | chr7_4:24357150-24357169 | None:intergenic | 35.0% |
| ! | TACCCATTGAACCTATTTCT+TGG | - | chr7_4:24357151-24357170 | None:intergenic | 35.0% |
| ACAAGTGATAGAACATGCTA+TGG | + | chr7_4:24357181-24357200 | Msa1146570:intron | 35.0% | |
| CAAGTGATAGAACATGCTAT+GGG | + | chr7_4:24357182-24357201 | Msa1146570:intron | 35.0% | |
| GATCTATACTCTATGTTGAG+TGG | + | chr7_4:24357267-24357286 | Msa1146570:intron | 35.0% | |
| TGACAATTGGCTACATAATG+TGG | - | chr7_4:24357749-24357768 | None:intergenic | 35.0% | |
| CATTATGTAGCCAATTGTCA+CGG | + | chr7_4:24357749-24357768 | Msa1146570:intron | 35.0% | |
| !! | ATTCAACTTCAGGTGTTGAA+TGG | + | chr7_4:24358036-24358055 | Msa1146570:CDS | 35.0% |
| !! | TTCAACTTCAGGTGTTGAAT+GGG | + | chr7_4:24358037-24358056 | Msa1146570:CDS | 35.0% |
| AATTTGAACTCACAAGTGGA+TGG | + | chr7_4:24358109-24358128 | Msa1146570:CDS | 35.0% | |
| TGGCAAGATATGGTTTGAGA+AGG | + | chr7_4:24352124-24352143 | Msa1146570:CDS | 40.0% | |
| GGCAAGATATGGTTTGAGAA+GGG | + | chr7_4:24352125-24352144 | Msa1146570:CDS | 40.0% | |
| AGATATGGTTTGAGAAGGGT+TGG | + | chr7_4:24352129-24352148 | Msa1146570:intron | 40.0% | |
| !!! | CTACGATTTTTAGCATTCGG+AGG | - | chr7_4:24352323-24352342 | None:intergenic | 40.0% |
| ACATGGAAAATCACAGAAGG+TGG | + | chr7_4:24352421-24352440 | Msa1146570:intron | 40.0% | |
| !!! | TTTTCTGGAGTGATAAGGGA+TGG | + | chr7_4:24352573-24352592 | Msa1146570:intron | 40.0% |
| !! | ACACTAGTTCTACCCAACAT+GGG | - | chr7_4:24352788-24352807 | None:intergenic | 40.0% |
| GGGGTGTACCTCTAATTAAT+GGG | + | chr7_4:24352877-24352896 | Msa1146570:intron | 40.0% | |
| GGGTGTACCTCTAATTAATG+GGG | + | chr7_4:24352878-24352897 | Msa1146570:intron | 40.0% | |
| GGTGTACCTCTAATTAATGG+GGG | + | chr7_4:24352879-24352898 | Msa1146570:intron | 40.0% | |
| GACAACTCAAGGAAACTCTT+TGG | - | chr7_4:24353304-24353323 | None:intergenic | 40.0% | |
| ! | AAGAGTTTCCTTGAGTTGTC+GGG | + | chr7_4:24353304-24353323 | Msa1146570:intron | 40.0% |
| CGTCAACACAAGTCAAGAAA+GGG | - | chr7_4:24353347-24353366 | None:intergenic | 40.0% | |
| TCGTCAACACAAGTCAAGAA+AGG | - | chr7_4:24353348-24353367 | None:intergenic | 40.0% | |
| CTTGTTAAACAAGTCGAAGG+AGG | - | chr7_4:24353388-24353407 | None:intergenic | 40.0% | |
| !! | GGACTTGTTAAACAAGTCGA+AGG | - | chr7_4:24353391-24353410 | None:intergenic | 40.0% |
| AGAACACTCCTATTTCCGAA+GGG | - | chr7_4:24353439-24353458 | None:intergenic | 40.0% | |
| AAGAACACTCCTATTTCCGA+AGG | - | chr7_4:24353440-24353459 | None:intergenic | 40.0% | |
| CTTAAGACCTAGTCCCTATT+CGG | + | chr7_4:24353457-24353476 | Msa1146570:intron | 40.0% | |
| CATTATACCGAATAGGGACT+AGG | - | chr7_4:24353467-24353486 | None:intergenic | 40.0% | |
| GAAGGGACATTATACCGAAT+AGG | - | chr7_4:24353474-24353493 | None:intergenic | 40.0% | |
| TGTCCCTTCGGAATTAAGAA+AGG | + | chr7_4:24353485-24353504 | Msa1146570:intron | 40.0% | |
| GAAGGGACATATATTACCGA+AGG | - | chr7_4:24353527-24353546 | None:intergenic | 40.0% | |
| AGATCATTCTTGATTCCGAC+GGG | - | chr7_4:24353600-24353619 | None:intergenic | 40.0% | |
| GTGGAAACACCATATTTGAG+TGG | + | chr7_4:24353737-24353756 | Msa1146570:intron | 40.0% | |
| GTGCTAAGACCACTCAAATA+TGG | - | chr7_4:24353749-24353768 | None:intergenic | 40.0% | |
| !!! | CTGAACTTGTTTTATCCTGG+AGG | + | chr7_4:24353877-24353896 | Msa1146570:intron | 40.0% |
| !!! | AACTTGTTTTATCCTGGAGG+CGG | + | chr7_4:24353880-24353899 | Msa1146570:intron | 40.0% |
| !!! | GCTCTCTTTAAGACGTTTTG+TGG | - | chr7_4:24353944-24353963 | None:intergenic | 40.0% |
| ! | TGGAGTTTTTGTGGCTCAAT+GGG | - | chr7_4:24354608-24354627 | None:intergenic | 40.0% |
| ! | TTGGAGTTTTTGTGGCTCAA+TGG | - | chr7_4:24354609-24354628 | None:intergenic | 40.0% |
| ! | CTTTTCCTGACAAGAGTGAA+TGG | - | chr7_4:24354761-24354780 | None:intergenic | 40.0% |
| TACTAGTGAGTTCAACTCTC+GGG | - | chr7_4:24355260-24355279 | None:intergenic | 40.0% | |
| CTACTAGTGAGTTCAACTCT+CGG | - | chr7_4:24355261-24355280 | None:intergenic | 40.0% | |
| ! | CTAGCTTTCTTACCTCTTTG+AGG | - | chr7_4:24355545-24355564 | None:intergenic | 40.0% |
| CCATAATTCAGCATCCAATG+AGG | - | chr7_4:24355637-24355656 | None:intergenic | 40.0% | |
| CCTCATTGGATGCTGAATTA+TGG | + | chr7_4:24355634-24355653 | Msa1146570:intron | 40.0% | |
| AAGGCTATCCTTGTAGTCAA+AGG | + | chr7_4:24355803-24355822 | Msa1146570:intron | 40.0% | |
| AGTTATGAACGGCGACTAAA+GGG | - | chr7_4:24355909-24355928 | None:intergenic | 40.0% | |
| AGGCAACTTTCACATCCATT+TGG | - | chr7_4:24355942-24355961 | None:intergenic | 40.0% | |
| GAGCATCATTGACAGTACTT+AGG | + | chr7_4:24356454-24356473 | Msa1146570:intron | 40.0% | |
| !! | GATATTGACTCAGTCCACTA+TGG | + | chr7_4:24356745-24356764 | Msa1146570:intron | 40.0% |
| !! | GGAAACGGTTTTATCCACTA+AGG | - | chr7_4:24356845-24356864 | None:intergenic | 40.0% |
| ATCGTTACCACAATGGTAAG+AGG | + | chr7_4:24356914-24356933 | Msa1146570:intron | 40.0% | |
| ATAATCGCCTCTTACCATTG+TGG | - | chr7_4:24356924-24356943 | None:intergenic | 40.0% | |
| CTAGCTACTCTCAAAAGGAA+CGG | + | chr7_4:24356974-24356993 | Msa1146570:intron | 40.0% | |
| CCATCCTATTGGATGTGTTT+AGG | - | chr7_4:24357073-24357092 | None:intergenic | 40.0% | |
| CCTAAACACATCCAATAGGA+TGG | + | chr7_4:24357070-24357089 | Msa1146570:intron | 40.0% | |
| ATAAACCATGCAGCGATAGA+AGG | + | chr7_4:24357219-24357238 | Msa1146570:intron | 40.0% | |
| TAGACTCACCTATACGAATG+TGG | + | chr7_4:24357317-24357336 | Msa1146570:intron | 40.0% | |
| !!! | CTAGTTTTAACGAACGCTCT+AGG | - | chr7_4:24357380-24357399 | None:intergenic | 40.0% |
| ! | CTAGAGCGTTCGTTAAAACT+AGG | + | chr7_4:24357378-24357397 | Msa1146570:intron | 40.0% |
| AAAACTAGGATAGACGTGCA+TGG | + | chr7_4:24357392-24357411 | Msa1146570:intron | 40.0% | |
| TCTAAAAGCCCGTGCATTTA+TGG | - | chr7_4:24357418-24357437 | None:intergenic | 40.0% | |
| ! | GAATTTTACTCGCTATGCAG+AGG | + | chr7_4:24357517-24357536 | Msa1146570:intron | 40.0% |
| !! | TATGCAGAGGTTCAAGTTGT+AGG | + | chr7_4:24357530-24357549 | Msa1146570:intron | 40.0% |
| AAATTCAAGTGGGGGATTGT+TGG | + | chr7_4:24357619-24357638 | Msa1146570:intron | 40.0% | |
| GAGAGGAGATATTCAACTTC+AGG | + | chr7_4:24358026-24358045 | Msa1146570:CDS | 40.0% | |
| !! | AGGTGTTGAATGGGATAGTT+TGG | + | chr7_4:24358046-24358065 | Msa1146570:CDS | 40.0% |
| TCTATCAAGATGTGCGCTAA+AGG | + | chr7_4:24358081-24358100 | Msa1146570:CDS | 40.0% | |
| GAAGCTAAGAAGGTCTCCAA+TGG | + | chr7_4:24352284-24352303 | Msa1146570:CDS | 45.0% | |
| AAGAAGGTCTCCAATGGTCA+AGG | + | chr7_4:24352290-24352309 | Msa1146570:CDS | 45.0% | |
| ATCGTAGAGCAGCTCAAAAG+AGG | + | chr7_4:24352336-24352355 | Msa1146570:CDS | 45.0% | |
| !! | CACACTAGTTCTACCCAACA+TGG | - | chr7_4:24352789-24352808 | None:intergenic | 45.0% |
| ! | GGGGGTGTACCTCTAATTAA+TGG | + | chr7_4:24352876-24352895 | Msa1146570:intron | 45.0% |
| ! | CAAGGAAACTCTTTGGTGTG+TGG | - | chr7_4:24353297-24353316 | None:intergenic | 45.0% |
| AAAGAGTTCCCGACAACTCA+AGG | - | chr7_4:24353315-24353334 | None:intergenic | 45.0% | |
| GGGCAGAAAGGAGTAGAAAA+AGG | - | chr7_4:24353418-24353437 | None:intergenic | 45.0% | |
| GAACACTCCTATTTCCGAAG+GGG | - | chr7_4:24353438-24353457 | None:intergenic | 45.0% | |
| CAAGTTCAGCTACAACTGTG+CGG | - | chr7_4:24353866-24353885 | None:intergenic | 45.0% | |
| GCACTACCCAAAATTGTGCA+AGG | - | chr7_4:24353922-24353941 | None:intergenic | 45.0% | |
| TGTGGCTCAATGGGTCTATA+TGG | - | chr7_4:24354599-24354618 | None:intergenic | 45.0% | |
| GTGTACCATTCACTCTTGTC+AGG | + | chr7_4:24354753-24354772 | Msa1146570:intron | 45.0% | |
| ACTAGTGAGTTCAACTCTCG+GGG | - | chr7_4:24355259-24355278 | None:intergenic | 45.0% | |
| GAGTTATGAACGGCGACTAA+AGG | - | chr7_4:24355910-24355929 | None:intergenic | 45.0% | |
| TTTCACGACATCGGCAATGT+CGG | - | chr7_4:24356502-24356521 | None:intergenic | 45.0% | |
| TGCACATTGAGCATCACTAG+AGG | + | chr7_4:24356702-24356721 | Msa1146570:intron | 45.0% | |
| TGCTAGTTGAGATCCCTTAG+TGG | + | chr7_4:24356828-24356847 | Msa1146570:intron | 45.0% | |
| GAGAGCTAGCTACTCTCAAA+AGG | + | chr7_4:24356969-24356988 | Msa1146570:intron | 45.0% | |
| GACTGGAGATCCCAAGAAAT+AGG | + | chr7_4:24357137-24357156 | Msa1146570:intron | 45.0% | |
| TGAGTGGAGTACATAGCTAC+AGG | + | chr7_4:24357283-24357302 | Msa1146570:intron | 45.0% | |
| CCTCAGTTCCACATTCGTAT+AGG | - | chr7_4:24357328-24357347 | None:intergenic | 45.0% | |
| CCTATACGAATGTGGAACTG+AGG | + | chr7_4:24357325-24357344 | Msa1146570:intron | 45.0% | |
| TATTCTGCCCCGAATTCCAT+TGG | - | chr7_4:24357357-24357376 | None:intergenic | 45.0% | |
| ATGGGATAGTTTGGTCTGCT+AGG | + | chr7_4:24358055-24358074 | Msa1146570:CDS | 45.0% | |
| TGAACTCACAAGTGGATGGA+AGG | + | chr7_4:24358113-24358132 | Msa1146570:CDS | 45.0% | |
| !! | TGGATGGAAGGCATTTGCAA+AGG | + | chr7_4:24358125-24358144 | Msa1146570:CDS | 45.0% |
| !! | TTAATTAATTGAAATATTAT+TGG | + | chr7_4:24357822-24357841 | Msa1146570:intron | 5.0% |
| ! | GAGCATCACTCTCTAGCTCA+TGG | + | chr7_4:24352164-24352183 | Msa1146570:intron | 50.0% |
| AGTGGAAGTCTCACATCGGA+TGG | + | chr7_4:24352824-24352843 | Msa1146570:intron | 50.0% | |
| TCTACTCCTTTCTGCCCCTT+CGG | + | chr7_4:24353421-24353440 | Msa1146570:intron | 50.0% | |
| CTATTTCCGAAGGGGCAGAA+AGG | - | chr7_4:24353430-24353449 | None:intergenic | 50.0% | |
| CTTTCTGCCCCTTCGGAAAT+AGG | + | chr7_4:24353428-24353447 | Msa1146570:intron | 50.0% | |
| ACGTCTTAAAGAGAGCGACC+TGG | + | chr7_4:24353948-24353967 | Msa1146570:intron | 50.0% | |
| ! | TACTAGGTTGAGTCACGACC+AGG | - | chr7_4:24353969-24353988 | None:intergenic | 50.0% |
| TACTTGCGGCCCTTATGACT+TGG | - | chr7_4:24354343-24354362 | None:intergenic | 50.0% | |
| GCGACCTGCTCTTATACTTG+CGG | - | chr7_4:24354357-24354376 | None:intergenic | 50.0% | |
| !! | AAGAATAGTGGGGGCACTAG+TGG | + | chr7_4:24355410-24355429 | Msa1146570:intron | 50.0% |
| !! | AGAATAGTGGGGGCACTAGT+GGG | + | chr7_4:24355411-24355430 | Msa1146570:intron | 50.0% |
| GGGCATTAGTCCCATCCTAT+TGG | - | chr7_4:24357084-24357103 | None:intergenic | 50.0% | |
| AGGATGGGACTAATGCCCAA+AGG | + | chr7_4:24357086-24357105 | Msa1146570:intron | 50.0% | |
| TGCCCAAAGGTCACAAGTGA+TGG | + | chr7_4:24357099-24357118 | Msa1146570:intron | 50.0% | |
| GATCTCCAGTCATGTAGGTC+GGG | - | chr7_4:24357128-24357147 | None:intergenic | 50.0% | |
| GGATCTCCAGTCATGTAGGT+CGG | - | chr7_4:24357129-24357148 | None:intergenic | 50.0% | |
| CTTGGGATCTCCAGTCATGT+AGG | - | chr7_4:24357133-24357152 | None:intergenic | 50.0% | |
| CTCATCCTTCTATCGCTGCA+TGG | - | chr7_4:24357227-24357246 | None:intergenic | 50.0% | |
| TACGAATGTGGAACTGAGGC+CGG | + | chr7_4:24357329-24357348 | Msa1146570:intron | 50.0% | |
| ! | AGGCCGGTTCCAATGGAATT+CGG | + | chr7_4:24357345-24357364 | Msa1146570:intron | 50.0% |
| CGTGCATGGCCATAAATGCA+CGG | + | chr7_4:24357406-24357425 | Msa1146570:intron | 50.0% | |
| GTGCATGGCCATAAATGCAC+GGG | + | chr7_4:24357407-24357426 | Msa1146570:intron | 50.0% | |
| AGTCGAAGGAGGGAGAAGAG+AGG | - | chr7_4:24353377-24353396 | None:intergenic | 55.0% | |
| AGGGCCGCAAGTATAAGAGC+AGG | + | chr7_4:24354350-24354369 | Msa1146570:intron | 55.0% | |
| !! | GAATAGTGGGGGCACTAGTG+GGG | + | chr7_4:24355412-24355431 | Msa1146570:intron | 55.0% |
| !! | AATAGTGGGGGCACTAGTGG+GGG | + | chr7_4:24355413-24355432 | Msa1146570:intron | 55.0% |
| ! | GGCCGGTTCCAATGGAATTC+GGG | + | chr7_4:24357346-24357365 | Msa1146570:intron | 55.0% |
| ! | GCCGGTTCCAATGGAATTCG+GGG | + | chr7_4:24357347-24357366 | Msa1146570:intron | 55.0% |
| GCCCCGAATTCCATTGGAAC+CGG | - | chr7_4:24357351-24357370 | None:intergenic | 55.0% | |
| CTATCAACAACGCCGCCTCC+AGG | - | chr7_4:24353895-24353914 | None:intergenic | 60.0% | |
| ! | GGAACTGAGGCCGGTTCCAA+TGG | + | chr7_4:24357338-24357357 | Msa1146570:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 24352123 | 24358284 | 24352123 | ID=Msa1146570;Name=Msa1146570 |
| chr7_4 | mRNA | 24352123 | 24358284 | 24352123 | ID=Msa1146570-mRNA-1;Parent=Msa1146570;Name=Msa1146570-mRNA-1;_AED=0.18;_eAED=0.22;_QI=0|0|0|1|0|0.33|3|0|179 |
| chr7_4 | exon | 24352123 | 24352146 | 24352123 | ID=Msa1146570-mRNA-1:exon:6075;Parent=Msa1146570-mRNA-1 |
| chr7_4 | exon | 24352230 | 24352439 | 24352230 | ID=Msa1146570-mRNA-1:exon:6076;Parent=Msa1146570-mRNA-1 |
| chr7_4 | exon | 24357979 | 24358284 | 24357979 | ID=Msa1146570-mRNA-1:exon:6077;Parent=Msa1146570-mRNA-1 |
| chr7_4 | CDS | 24352123 | 24352146 | 24352123 | ID=Msa1146570-mRNA-1:cds;Parent=Msa1146570-mRNA-1 |
| chr7_4 | CDS | 24352230 | 24352439 | 24352230 | ID=Msa1146570-mRNA-1:cds;Parent=Msa1146570-mRNA-1 |
| chr7_4 | CDS | 24357979 | 24358284 | 24357979 | ID=Msa1146570-mRNA-1:cds;Parent=Msa1146570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
