Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146620 | AES78894.2 | 80.312 | 320 | 34 | 4 | 1 | 291 | 1 | 320 | 2.96e-179 | 507 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146620 | sp|Q8L3W1|VRN1_ARATH | 27.628 | 333 | 168 | 11 | 6 | 274 | 2 | 325 | 1.65e-20 | 93.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146620 | G7KVW7 | 80.312 | 320 | 34 | 4 | 1 | 291 | 1 | 320 | 1.42e-179 | 507 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1146620 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146620 | MtrunA17_Chr7g0233571 | 77.376 | 221 | 29 | 2 | 1 | 200 | 1 | 221 | 1.45e-117 | 337 |
| Msa1146620 | MtrunA17_Chr3g0131891 | 55.305 | 311 | 104 | 11 | 1 | 288 | 7 | 305 | 8.24e-103 | 303 |
| Msa1146620 | MtrunA17_Chr7g0233561 | 52.614 | 306 | 121 | 8 | 4 | 288 | 12 | 314 | 3.46e-98 | 291 |
| Msa1146620 | MtrunA17_Chr7g0233541 | 54.035 | 285 | 107 | 6 | 25 | 288 | 1 | 282 | 2.91e-97 | 288 |
| Msa1146620 | MtrunA17_Chr7g0233521 | 54.779 | 272 | 108 | 7 | 25 | 288 | 1 | 265 | 7.87e-96 | 283 |
| Msa1146620 | MtrunA17_Chr7g0233531 | 51.237 | 283 | 101 | 11 | 25 | 288 | 1 | 265 | 1.30e-80 | 245 |
| Msa1146620 | MtrunA17_Chr8g0390841 | 32.903 | 310 | 158 | 11 | 10 | 286 | 39 | 331 | 8.60e-37 | 137 |
| Msa1146620 | MtrunA17_Chr1g0208771 | 31.849 | 292 | 154 | 10 | 26 | 286 | 13 | 290 | 1.71e-36 | 135 |
| Msa1146620 | MtrunA17_Chr1g0163071 | 32.333 | 300 | 152 | 8 | 25 | 286 | 1 | 287 | 4.52e-36 | 131 |
| Msa1146620 | MtrunA17_Chr3g0103181 | 29.000 | 300 | 163 | 11 | 7 | 285 | 9 | 279 | 4.43e-29 | 112 |
| Msa1146620 | MtrunA17_Chr1g0171611 | 31.488 | 289 | 152 | 8 | 7 | 279 | 6 | 264 | 4.63e-29 | 112 |
| Msa1146620 | MtrunA17_Chr1g0163231 | 31.707 | 287 | 166 | 11 | 7 | 279 | 6 | 276 | 3.80e-28 | 110 |
| Msa1146620 | MtrunA17_Chr4g0067431 | 28.197 | 305 | 186 | 7 | 8 | 285 | 13 | 311 | 5.63e-24 | 99.4 |
| Msa1146620 | MtrunA17_Chr1g0163261 | 27.632 | 304 | 167 | 9 | 5 | 282 | 4 | 280 | 3.20e-22 | 94.0 |
| Msa1146620 | MtrunA17_Chr1g0163181 | 31.022 | 274 | 160 | 9 | 19 | 271 | 14 | 279 | 4.12e-22 | 95.5 |
| Msa1146620 | MtrunA17_Chr1g0154131 | 28.013 | 307 | 183 | 9 | 8 | 287 | 177 | 472 | 1.21e-21 | 94.4 |
| Msa1146620 | MtrunA17_Chr1g0163251 | 30.847 | 295 | 173 | 14 | 1 | 282 | 1 | 277 | 1.44e-21 | 93.6 |
| Msa1146620 | MtrunA17_Chr3g0103171 | 27.473 | 273 | 172 | 9 | 26 | 285 | 6 | 265 | 7.93e-21 | 89.4 |
| Msa1146620 | MtrunA17_Chr1g0154171 | 24.496 | 347 | 187 | 9 | 3 | 288 | 16 | 348 | 8.15e-21 | 90.9 |
| Msa1146620 | MtrunA17_Chr1g0154161 | 26.190 | 294 | 187 | 8 | 5 | 281 | 25 | 305 | 1.05e-20 | 90.1 |
| Msa1146620 | MtrunA17_Chr1g0163201 | 29.433 | 282 | 169 | 9 | 23 | 286 | 16 | 285 | 1.20e-20 | 90.9 |
| Msa1146620 | MtrunA17_Chr3g0103191 | 29.918 | 244 | 142 | 9 | 7 | 227 | 9 | 246 | 4.62e-19 | 84.3 |
| Msa1146620 | MtrunA17_Chr3g0103151 | 45.055 | 91 | 48 | 1 | 7 | 97 | 9 | 97 | 6.68e-19 | 81.6 |
| Msa1146620 | MtrunA17_Chr1g0154191 | 24.620 | 329 | 187 | 8 | 3 | 271 | 15 | 342 | 6.81e-19 | 85.5 |
| Msa1146620 | MtrunA17_Chr5g0419201 | 40.698 | 86 | 51 | 0 | 10 | 95 | 16 | 101 | 1.68e-17 | 79.0 |
| Msa1146620 | MtrunA17_Chr1g0163221 | 26.159 | 302 | 179 | 9 | 8 | 285 | 9 | 290 | 4.73e-17 | 80.1 |
| Msa1146620 | MtrunA17_Chr1g0154151 | 21.975 | 314 | 183 | 8 | 26 | 290 | 20 | 320 | 3.43e-16 | 77.4 |
| Msa1146620 | MtrunA17_Chr4g0033961 | 38.889 | 90 | 55 | 0 | 5 | 94 | 1 | 90 | 3.24e-15 | 75.5 |
| Msa1146620 | MtrunA17_Chr4g0033961 | 37.069 | 116 | 65 | 3 | 171 | 286 | 281 | 388 | 2.10e-13 | 70.1 |
| Msa1146620 | MtrunA17_Chr1g0163131 | 25.806 | 310 | 164 | 14 | 2 | 271 | 10 | 293 | 1.14e-14 | 72.8 |
| Msa1146620 | MtrunA17_Chr1g0163241 | 45.714 | 70 | 36 | 1 | 26 | 95 | 23 | 90 | 7.17e-14 | 68.2 |
| Msa1146620 | MtrunA17_Chr5g0429931 | 26.182 | 275 | 169 | 11 | 13 | 286 | 1 | 242 | 1.22e-13 | 69.3 |
| Msa1146620 | MtrunA17_Chr1g0163191 | 38.235 | 102 | 54 | 2 | 19 | 113 | 14 | 113 | 2.11e-13 | 66.6 |
| Msa1146620 | MtrunA17_Chr1g0162441 | 38.202 | 89 | 55 | 0 | 6 | 94 | 3 | 91 | 4.05e-13 | 69.3 |
| Msa1146620 | MtrunA17_Chr1g0162441 | 31.008 | 129 | 81 | 3 | 158 | 286 | 272 | 392 | 4.91e-12 | 65.9 |
| Msa1146620 | MtrunA17_Chr3g0077411 | 25.172 | 290 | 179 | 10 | 9 | 287 | 261 | 523 | 4.31e-13 | 69.3 |
| Msa1146620 | MtrunA17_Chr1g0154211 | 31.928 | 166 | 86 | 5 | 3 | 148 | 16 | 174 | 5.10e-13 | 68.6 |
| Msa1146620 | MtrunA17_Chr6g0467351 | 38.462 | 91 | 55 | 1 | 8 | 97 | 13 | 103 | 8.75e-13 | 66.6 |
| Msa1146620 | MtrunA17_Chr1g0154101 | 28.655 | 171 | 104 | 4 | 9 | 170 | 183 | 344 | 1.46e-12 | 67.8 |
| Msa1146620 | MtrunA17_Chr1g0154101 | 39.080 | 87 | 53 | 0 | 9 | 95 | 24 | 110 | 1.92e-12 | 67.4 |
| Msa1146620 | MtrunA17_Chr1g0163101 | 34.058 | 138 | 75 | 5 | 9 | 142 | 16 | 141 | 3.73e-12 | 63.9 |
| Msa1146620 | MtrunA17_Chr1g0154251 | 36.782 | 87 | 54 | 1 | 9 | 95 | 26 | 111 | 4.05e-11 | 63.2 |
| Msa1146620 | MtrunA17_Chr3g0077461 | 27.473 | 273 | 144 | 11 | 9 | 276 | 236 | 459 | 4.51e-11 | 63.2 |
| Msa1146620 | MtrunA17_Chr1g0154071 | 36.264 | 91 | 56 | 1 | 5 | 95 | 152 | 240 | 8.46e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146620 | AT3G18990.1 | 27.628 | 333 | 168 | 11 | 6 | 274 | 2 | 325 | 1.67e-21 | 93.2 |
| Msa1146620 | AT3G18990.2 | 27.027 | 333 | 170 | 10 | 6 | 274 | 2 | 325 | 3.27e-21 | 92.8 |
| Msa1146620 | AT4G33280.1 | 27.097 | 310 | 187 | 10 | 8 | 286 | 18 | 319 | 1.44e-20 | 90.5 |
| Msa1146620 | AT4G01580.1 | 34.043 | 94 | 62 | 0 | 4 | 97 | 24 | 117 | 7.53e-15 | 72.0 |
| Msa1146620 | AT3G18960.1 | 34.043 | 94 | 62 | 0 | 4 | 97 | 24 | 117 | 1.56e-14 | 71.2 |
| Msa1146620 | AT3G18960.2 | 34.043 | 94 | 62 | 0 | 4 | 97 | 24 | 117 | 1.57e-14 | 71.2 |
| Msa1146620 | AT1G49475.1 | 37.647 | 85 | 52 | 1 | 10 | 94 | 34 | 117 | 4.31e-13 | 67.0 |
| Msa1146620 | AT3G18960.3 | 38.889 | 72 | 44 | 0 | 26 | 97 | 9 | 80 | 2.92e-12 | 64.3 |
Find 48 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCATTGTTCACATCTTT+AGG | 0.181697 | 7_4:-24413090 | Msa1146620:CDS |
| TTTAATCAACCTTGTGAAAT+TGG | 0.186306 | 7_4:-24414460 | Msa1146620:CDS |
| TTCTATTGCCTTTCCTAATT+AGG | 0.208443 | 7_4:+24413227 | None:intergenic |
| TATTTCTCCACAAACTTTCT+TGG | 0.217927 | 7_4:+24414828 | None:intergenic |
| CGAAGATGTGCACTTCAAAA+TGG | 0.226194 | 7_4:+24414631 | None:intergenic |
| ATTCATCTTAGGTTATTAAA+TGG | 0.226202 | 7_4:-24413271 | Msa1146620:CDS |
| CTTCATTGTTCACATCTTTA+GGG | 0.247443 | 7_4:-24413089 | Msa1146620:CDS |
| AGAAAGTTTGTGGAGAAATA+TGG | 0.293086 | 7_4:-24414825 | Msa1146620:CDS |
| TTTGGTAGAAGACACTTATT+AGG | 0.305303 | 7_4:-24413316 | Msa1146620:intron |
| CTCCGAAAATGATGAAGATT+TGG | 0.313894 | 7_4:-24414530 | Msa1146620:CDS |
| GGTTATTAAATGGGAGAGTT+TGG | 0.317803 | 7_4:-24413261 | Msa1146620:CDS |
| TTCCTAATTAGGTACCTTGC+AGG | 0.344093 | 7_4:+24413238 | None:intergenic |
| GTCTTTAGATATATAGCATT+TGG | 0.345286 | 7_4:+24414792 | None:intergenic |
| GGCCTGCAAGGTACCTAATT+AGG | 0.348434 | 7_4:-24413240 | Msa1146620:CDS |
| TTTATCTCAAGGCCATCTTC+TGG | 0.349266 | 7_4:-24414676 | Msa1146620:CDS |
| AGCAAGGAGATATTCATCTT+AGG | 0.368678 | 7_4:-24413282 | Msa1146620:CDS |
| CTGTGTTAAAGTCAGGAAAT+TGG | 0.372609 | 7_4:-24414428 | Msa1146620:CDS |
| CAGAACATACCAAGTGAGTT+TGG | 0.372621 | 7_4:-24413334 | Msa1146620:CDS |
| TGCAAAGTCGAAATTAGATT+TGG | 0.389692 | 7_4:-24414760 | Msa1146620:CDS |
| CATTGATGCTGCTTGTAATC+TGG | 0.414628 | 7_4:-24414061 | Msa1146620:intron |
| TGGACGCATGACAGCAATAA+AGG | 0.428279 | 7_4:+24414089 | None:intergenic |
| TTCATCTTAGGTTATTAAAT+GGG | 0.428424 | 7_4:-24413270 | Msa1146620:CDS |
| AAATATGGTTTCAAAAGGGT+TGG | 0.440218 | 7_4:-24414722 | Msa1146620:CDS |
| GATGATGCCAAGAAAGTTTG+TGG | 0.445895 | 7_4:-24414835 | Msa1146620:CDS |
| TTACAAGGTTTCCTTGATGA+AGG | 0.449052 | 7_4:+24414990 | None:intergenic |
| TTGAGTATTCAGCTTGATCA+TGG | 0.449471 | 7_4:-24415062 | None:intergenic |
| AAAAGGGTATTCAACGATCT+TGG | 0.453506 | 7_4:-24414561 | Msa1146620:intron |
| GCAATAGCTGTGTTAAAGTC+AGG | 0.478236 | 7_4:-24414435 | Msa1146620:CDS |
| GAAGATGTGCACTTCAAAAT+GGG | 0.484263 | 7_4:+24414632 | None:intergenic |
| ATTAGGAAAGGCAATAGAAA+AGG | 0.485719 | 7_4:-24413223 | Msa1146620:CDS |
| TTGAAATGTACTCAGGTGAA+TGG | 0.492940 | 7_4:-24413192 | Msa1146620:CDS |
| CATATTTGAAAACCAGAAGA+TGG | 0.494768 | 7_4:+24414664 | None:intergenic |
| AAGGTAAGTATAGTGCTAGT+AGG | 0.504595 | 7_4:+24413109 | None:intergenic |
| CCTAAAGATGTGAACAATGA+AGG | 0.508003 | 7_4:+24413090 | None:intergenic |
| CATAGAGTTTGCTCGGTCAA+AGG | 0.509155 | 7_4:+24414128 | None:intergenic |
| AAGTTCTCATAGAGTTTGCT+CGG | 0.514060 | 7_4:+24414121 | None:intergenic |
| TAAAGTCAGGAAATTGGAAA+AGG | 0.514523 | 7_4:-24414422 | Msa1146620:CDS |
| AATTTCGACTTTGCACCACT+TGG | 0.516653 | 7_4:+24414768 | None:intergenic |
| GAAGACAACAACTTGAAAGT+TGG | 0.520581 | 7_4:-24413157 | Msa1146620:CDS |
| CAAGCAGCATCAATGTATGA+TGG | 0.531742 | 7_4:+24414069 | None:intergenic |
| ATGGGAGAGTTTGGCCTGCA+AGG | 0.535413 | 7_4:-24413252 | Msa1146620:CDS |
| AAGTATCATTCTTTATCTCA+AGG | 0.553311 | 7_4:-24414687 | Msa1146620:CDS |
| CGCATGACAGCAATAAAGGA+TGG | 0.564569 | 7_4:+24414093 | None:intergenic |
| CTATTGCTTCCAATTTCACA+AGG | 0.596543 | 7_4:+24414451 | None:intergenic |
| TGTGATCAAAGCCTTCATCA+AGG | 0.598883 | 7_4:-24415001 | Msa1146620:CDS |
| GCAAGGTACCTAATTAGGAA+AGG | 0.619850 | 7_4:-24413235 | Msa1146620:CDS |
| TGTCTTCTACCAAACTCACT+TGG | 0.634081 | 7_4:+24413325 | None:intergenic |
| ATATATCTAAAGACTCCAAG+TGG | 0.664356 | 7_4:-24414783 | Msa1146620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAACCATATTAATATAA+CGG | + | chr7_4:24413261-24413280 | None:intergenic | 10.0% |
| !! | ATTAAACCATATTAATATAA+CGG | + | chr7_4:24413261-24413280 | None:intergenic | 10.0% |
| !!! | ACATATGATCTTTAAAAAAT+GGG | + | chr7_4:24413107-24413126 | None:intergenic | 15.0% |
| !! | AAGCTTGAAAAAAAAAAAAA+AGG | + | chr7_4:24413176-24413195 | None:intergenic | 15.0% |
| !!! | ACAGATATTTTAATTGTAAA+TGG | + | chr7_4:24413236-24413255 | None:intergenic | 15.0% |
| !! | TAATAGATCAATGAAAATTA+TGG | - | chr7_4:24413916-24413935 | Msa1146620:intron | 15.0% |
| !!! | TATTTTTAGTTCAATATGTT+TGG | - | chr7_4:24414342-24414361 | Msa1146620:intron | 15.0% |
| !! | AAAAAGATTAAATATGTTTG+TGG | + | chr7_4:24414456-24414475 | None:intergenic | 15.0% |
| !!! | TGTAATCTTTTTTTCTAATT+TGG | - | chr7_4:24414562-24414581 | Msa1146620:intron | 15.0% |
| !!! | ACATATGATCTTTAAAAAAT+GGG | + | chr7_4:24413107-24413126 | None:intergenic | 15.0% |
| !! | AAGCTTGAAAAAAAAAAAAA+AGG | + | chr7_4:24413176-24413195 | None:intergenic | 15.0% |
| !!! | ACAGATATTTTAATTGTAAA+TGG | + | chr7_4:24413236-24413255 | None:intergenic | 15.0% |
| !! | TAATAGATCAATGAAAATTA+TGG | - | chr7_4:24413916-24413935 | Msa1146620:intron | 15.0% |
| !!! | TATTTTTAGTTCAATATGTT+TGG | - | chr7_4:24414342-24414361 | Msa1146620:intron | 15.0% |
| !! | AAAAAGATTAAATATGTTTG+TGG | + | chr7_4:24414456-24414475 | None:intergenic | 15.0% |
| !!! | TGTAATCTTTTTTTCTAATT+TGG | - | chr7_4:24414562-24414581 | Msa1146620:intron | 15.0% |
| !!! | CACATATGATCTTTAAAAAA+TGG | + | chr7_4:24413108-24413127 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAGGTAAATGAG+TGG | + | chr7_4:24413165-24413184 | None:intergenic | 20.0% |
| !!! | TAAAAAGTGATGGAAAAATA+TGG | - | chr7_4:24413388-24413407 | Msa1146620:intron | 20.0% |
| !!! | AATATTGACAAAAAGTGTAA+AGG | - | chr7_4:24413740-24413759 | Msa1146620:intron | 20.0% |
| !! | ATTTACTTTCACTTTATGAT+TGG | - | chr7_4:24413843-24413862 | Msa1146620:intron | 20.0% |
| !! | ATTGGTTAAGTTTCATATTA+TGG | - | chr7_4:24413861-24413880 | Msa1146620:intron | 20.0% |
| !!! | AAGGTCATAACTTTTTTTAA+TGG | - | chr7_4:24414113-24414132 | Msa1146620:CDS | 20.0% |
| !!! | TAACTTTTTTTAATGGATGA+AGG | - | chr7_4:24414120-24414139 | Msa1146620:CDS | 20.0% |
| !!! | AATTTGGTAATTTGTTATAG+TGG | + | chr7_4:24414294-24414313 | None:intergenic | 20.0% |
| !!! | TTAGTCCAAACATTTTTATA+TGG | - | chr7_4:24414391-24414410 | Msa1146620:CDS | 20.0% |
| !! | TAAGTCCATATAAAAATGTT+TGG | + | chr7_4:24414399-24414418 | None:intergenic | 20.0% |
| !!! | AGAGTATTAGTAAATATAGT+CGG | + | chr7_4:24414740-24414759 | None:intergenic | 20.0% |
| !! | ATTCATCTTAGGTTATTAAA+TGG | - | chr7_4:24414854-24414873 | Msa1146620:intron | 20.0% |
| !! | TTCATCTTAGGTTATTAAAT+GGG | - | chr7_4:24414855-24414874 | Msa1146620:intron | 20.0% |
| !!! | CACATATGATCTTTAAAAAA+TGG | + | chr7_4:24413108-24413127 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAGGTAAATGAG+TGG | + | chr7_4:24413165-24413184 | None:intergenic | 20.0% |
| !!! | TAAAAAGTGATGGAAAAATA+TGG | - | chr7_4:24413388-24413407 | Msa1146620:intron | 20.0% |
| !!! | AATATTGACAAAAAGTGTAA+AGG | - | chr7_4:24413740-24413759 | Msa1146620:intron | 20.0% |
| !! | ATTTACTTTCACTTTATGAT+TGG | - | chr7_4:24413843-24413862 | Msa1146620:intron | 20.0% |
| !! | ATTGGTTAAGTTTCATATTA+TGG | - | chr7_4:24413861-24413880 | Msa1146620:intron | 20.0% |
| !!! | AAGGTCATAACTTTTTTTAA+TGG | - | chr7_4:24414113-24414132 | Msa1146620:CDS | 20.0% |
| !!! | TAACTTTTTTTAATGGATGA+AGG | - | chr7_4:24414120-24414139 | Msa1146620:CDS | 20.0% |
| !!! | AATTTGGTAATTTGTTATAG+TGG | + | chr7_4:24414294-24414313 | None:intergenic | 20.0% |
| !!! | TTAGTCCAAACATTTTTATA+TGG | - | chr7_4:24414391-24414410 | Msa1146620:CDS | 20.0% |
| !! | TAAGTCCATATAAAAATGTT+TGG | + | chr7_4:24414399-24414418 | None:intergenic | 20.0% |
| !!! | AGAGTATTAGTAAATATAGT+CGG | + | chr7_4:24414740-24414759 | None:intergenic | 20.0% |
| !! | ATTCATCTTAGGTTATTAAA+TGG | - | chr7_4:24414854-24414873 | Msa1146620:intron | 20.0% |
| !! | TTCATCTTAGGTTATTAAAT+GGG | - | chr7_4:24414855-24414874 | Msa1146620:intron | 20.0% |
| !! | ATGATCTTTAAAAAATGGGT+TGG | + | chr7_4:24413103-24413122 | None:intergenic | 25.0% |
| ! | CTGTTTCCGTTATATTAATA+TGG | - | chr7_4:24413252-24413271 | Msa1146620:CDS | 25.0% |
| ! | GTCTTTAGATATATAGCATT+TGG | + | chr7_4:24413336-24413355 | None:intergenic | 25.0% |
| !! | TTAGATTTGGTAAAAAGTGA+TGG | - | chr7_4:24413378-24413397 | Msa1146620:intron | 25.0% |
| ! | TGGAAAAATATGGTTTCAAA+AGG | - | chr7_4:24413398-24413417 | Msa1146620:intron | 25.0% |
| ! | GGAAAAATATGGTTTCAAAA+GGG | - | chr7_4:24413399-24413418 | Msa1146620:intron | 25.0% |
| ! | AAGTATCATTCTTTATCTCA+AGG | - | chr7_4:24413438-24413457 | Msa1146620:intron | 25.0% |
| !! | TTCCAAATCTTCATCATTTT+CGG | + | chr7_4:24413600-24413619 | None:intergenic | 25.0% |
| ! | TTTAATCAACCTTGTGAAAT+TGG | - | chr7_4:24413665-24413684 | Msa1146620:intron | 25.0% |
| ! | GAATGAAAAGCTAATAACTT+AGG | + | chr7_4:24413820-24413839 | None:intergenic | 25.0% |
| ! | ATCAATGAAAATTATGGCTT+AGG | - | chr7_4:24413922-24413941 | Msa1146620:intron | 25.0% |
| ! | TCAATGAAAATTATGGCTTA+GGG | - | chr7_4:24413923-24413942 | Msa1146620:intron | 25.0% |
| !!! | TTGTTATAGTGGTTTTTCAA+GGG | + | chr7_4:24414283-24414302 | None:intergenic | 25.0% |
| !!! | TTTGTTATAGTGGTTTTTCA+AGG | + | chr7_4:24414284-24414303 | None:intergenic | 25.0% |
| !! | CAAATTTTACCCATTAAGTA+GGG | - | chr7_4:24414308-24414327 | Msa1146620:intron | 25.0% |
| ! | TTTGATCAGAGATGTTTATA+GGG | + | chr7_4:24414369-24414388 | None:intergenic | 25.0% |
| !! | TTTTGATCAGAGATGTTTAT+AGG | + | chr7_4:24414370-24414389 | None:intergenic | 25.0% |
| ! | GGTCTATACATAATGAAAAA+TGG | - | chr7_4:24414483-24414502 | Msa1146620:CDS | 25.0% |
| !! | GAAAAATTTGAAATGTACTC+AGG | - | chr7_4:24414926-24414945 | Msa1146620:intron | 25.0% |
| !! | ATGATCTTTAAAAAATGGGT+TGG | + | chr7_4:24413103-24413122 | None:intergenic | 25.0% |
| ! | CTGTTTCCGTTATATTAATA+TGG | - | chr7_4:24413252-24413271 | Msa1146620:CDS | 25.0% |
| ! | GTCTTTAGATATATAGCATT+TGG | + | chr7_4:24413336-24413355 | None:intergenic | 25.0% |
| !! | TTAGATTTGGTAAAAAGTGA+TGG | - | chr7_4:24413378-24413397 | Msa1146620:intron | 25.0% |
| ! | TGGAAAAATATGGTTTCAAA+AGG | - | chr7_4:24413398-24413417 | Msa1146620:intron | 25.0% |
| ! | GGAAAAATATGGTTTCAAAA+GGG | - | chr7_4:24413399-24413418 | Msa1146620:intron | 25.0% |
| ! | AAGTATCATTCTTTATCTCA+AGG | - | chr7_4:24413438-24413457 | Msa1146620:intron | 25.0% |
| !! | TTCCAAATCTTCATCATTTT+CGG | + | chr7_4:24413600-24413619 | None:intergenic | 25.0% |
| ! | TTTAATCAACCTTGTGAAAT+TGG | - | chr7_4:24413665-24413684 | Msa1146620:intron | 25.0% |
| ! | GAATGAAAAGCTAATAACTT+AGG | + | chr7_4:24413820-24413839 | None:intergenic | 25.0% |
| ! | ATCAATGAAAATTATGGCTT+AGG | - | chr7_4:24413922-24413941 | Msa1146620:intron | 25.0% |
| ! | TCAATGAAAATTATGGCTTA+GGG | - | chr7_4:24413923-24413942 | Msa1146620:intron | 25.0% |
| !!! | TTGTTATAGTGGTTTTTCAA+GGG | + | chr7_4:24414283-24414302 | None:intergenic | 25.0% |
| !!! | TTTGTTATAGTGGTTTTTCA+AGG | + | chr7_4:24414284-24414303 | None:intergenic | 25.0% |
| !! | CAAATTTTACCCATTAAGTA+GGG | - | chr7_4:24414308-24414327 | Msa1146620:intron | 25.0% |
| ! | TTTGATCAGAGATGTTTATA+GGG | + | chr7_4:24414369-24414388 | None:intergenic | 25.0% |
| !! | TTTTGATCAGAGATGTTTAT+AGG | + | chr7_4:24414370-24414389 | None:intergenic | 25.0% |
| ! | GGTCTATACATAATGAAAAA+TGG | - | chr7_4:24414483-24414502 | Msa1146620:CDS | 25.0% |
| !! | GAAAAATTTGAAATGTACTC+AGG | - | chr7_4:24414926-24414945 | Msa1146620:intron | 25.0% |
| !! | ATCTTTAAAAAATGGGTTGG+AGG | + | chr7_4:24413100-24413119 | None:intergenic | 30.0% |
| TATTTCTCCACAAACTTTCT+TGG | + | chr7_4:24413300-24413319 | None:intergenic | 30.0% | |
| AGAAAGTTTGTGGAGAAATA+TGG | - | chr7_4:24413300-24413319 | Msa1146620:intron | 30.0% | |
| ATATATCTAAAGACTCCAAG+TGG | - | chr7_4:24413342-24413361 | Msa1146620:intron | 30.0% | |
| TGCAAAGTCGAAATTAGATT+TGG | - | chr7_4:24413365-24413384 | Msa1146620:intron | 30.0% | |
| AAATATGGTTTCAAAAGGGT+TGG | - | chr7_4:24413403-24413422 | Msa1146620:intron | 30.0% | |
| CATATTTGAAAACCAGAAGA+TGG | + | chr7_4:24413464-24413483 | None:intergenic | 30.0% | |
| !!! | CATCTTCTGGTTTTCAAATA+TGG | - | chr7_4:24413462-24413481 | Msa1146620:intron | 30.0% |
| !!! | GAAAGGGTATTTTATCTCTA+AGG | + | chr7_4:24413529-24413548 | None:intergenic | 30.0% |
| TAAAGTCAGGAAATTGGAAA+AGG | - | chr7_4:24413703-24413722 | Msa1146620:intron | 30.0% | |
| ! | CAAACAAAGGTTTTGCTTAA+AGG | - | chr7_4:24414094-24414113 | Msa1146620:CDS | 30.0% |
| !!! | CTTTTTTTGTGTTAATCCTC+TGG | - | chr7_4:24414148-24414167 | Msa1146620:CDS | 30.0% |
| !! | ATTTTGGGTGGAACAATTTT+TGG | + | chr7_4:24414233-24414252 | None:intergenic | 30.0% |
| ! | CCTACTTAATGGGTAAAATT+TGG | + | chr7_4:24414310-24414329 | None:intergenic | 30.0% |
| ! | CCAAATTTTACCCATTAAGT+AGG | - | chr7_4:24414307-24414326 | Msa1146620:intron | 30.0% |
| ! | CAGATTTGTGGTATTTTGTA+AGG | - | chr7_4:24414422-24414441 | Msa1146620:CDS | 30.0% |
| TTTGGTAGAAGACACTTATT+AGG | - | chr7_4:24414809-24414828 | Msa1146620:CDS | 30.0% | |
| TTCTATTGCCTTTCCTAATT+AGG | + | chr7_4:24414901-24414920 | None:intergenic | 30.0% | |
| ATTAGGAAAGGCAATAGAAA+AGG | - | chr7_4:24414902-24414921 | Msa1146620:intron | 30.0% | |
| CTTCATTGTTCACATCTTTA+GGG | - | chr7_4:24415036-24415055 | Msa1146620:CDS | 30.0% | |
| !! | ATCTTTAAAAAATGGGTTGG+AGG | + | chr7_4:24413100-24413119 | None:intergenic | 30.0% |
| TATTTCTCCACAAACTTTCT+TGG | + | chr7_4:24413300-24413319 | None:intergenic | 30.0% | |
| AGAAAGTTTGTGGAGAAATA+TGG | - | chr7_4:24413300-24413319 | Msa1146620:intron | 30.0% | |
| ATATATCTAAAGACTCCAAG+TGG | - | chr7_4:24413342-24413361 | Msa1146620:intron | 30.0% | |
| TGCAAAGTCGAAATTAGATT+TGG | - | chr7_4:24413365-24413384 | Msa1146620:intron | 30.0% | |
| AAATATGGTTTCAAAAGGGT+TGG | - | chr7_4:24413403-24413422 | Msa1146620:intron | 30.0% | |
| CATATTTGAAAACCAGAAGA+TGG | + | chr7_4:24413464-24413483 | None:intergenic | 30.0% | |
| !!! | CATCTTCTGGTTTTCAAATA+TGG | - | chr7_4:24413462-24413481 | Msa1146620:intron | 30.0% |
| !!! | GAAAGGGTATTTTATCTCTA+AGG | + | chr7_4:24413529-24413548 | None:intergenic | 30.0% |
| TAAAGTCAGGAAATTGGAAA+AGG | - | chr7_4:24413703-24413722 | Msa1146620:intron | 30.0% | |
| ! | CAAACAAAGGTTTTGCTTAA+AGG | - | chr7_4:24414094-24414113 | Msa1146620:CDS | 30.0% |
| !!! | CTTTTTTTGTGTTAATCCTC+TGG | - | chr7_4:24414148-24414167 | Msa1146620:CDS | 30.0% |
| !! | ATTTTGGGTGGAACAATTTT+TGG | + | chr7_4:24414233-24414252 | None:intergenic | 30.0% |
| ! | CCTACTTAATGGGTAAAATT+TGG | + | chr7_4:24414310-24414329 | None:intergenic | 30.0% |
| ! | CCAAATTTTACCCATTAAGT+AGG | - | chr7_4:24414307-24414326 | Msa1146620:intron | 30.0% |
| ! | CAGATTTGTGGTATTTTGTA+AGG | - | chr7_4:24414422-24414441 | Msa1146620:CDS | 30.0% |
| TTTGGTAGAAGACACTTATT+AGG | - | chr7_4:24414809-24414828 | Msa1146620:CDS | 30.0% | |
| TTCTATTGCCTTTCCTAATT+AGG | + | chr7_4:24414901-24414920 | None:intergenic | 30.0% | |
| ATTAGGAAAGGCAATAGAAA+AGG | - | chr7_4:24414902-24414921 | Msa1146620:intron | 30.0% | |
| CTTCATTGTTCACATCTTTA+GGG | - | chr7_4:24415036-24415055 | Msa1146620:CDS | 30.0% | |
| TTACAAGGTTTCCTTGATGA+AGG | + | chr7_4:24413138-24413157 | None:intergenic | 35.0% | |
| TAAATGAGTGGAAGCTTACA+AGG | + | chr7_4:24413153-24413172 | None:intergenic | 35.0% | |
| GAAGATGTGCACTTCAAAAT+GGG | + | chr7_4:24413496-24413515 | None:intergenic | 35.0% | |
| ! | AAGATCGTTGAATACCCTTT+TGG | + | chr7_4:24413565-24413584 | None:intergenic | 35.0% |
| !! | AAAAGGGTATTCAACGATCT+TGG | - | chr7_4:24413564-24413583 | Msa1146620:intron | 35.0% |
| CTCCGAAAATGATGAAGATT+TGG | - | chr7_4:24413595-24413614 | Msa1146620:intron | 35.0% | |
| CTATTGCTTCCAATTTCACA+AGG | + | chr7_4:24413677-24413696 | None:intergenic | 35.0% | |
| CTGTGTTAAAGTCAGGAAAT+TGG | - | chr7_4:24413697-24413716 | Msa1146620:intron | 35.0% | |
| ! | GAATTTTGCAGGAAAGCAAT+TGG | - | chr7_4:24413953-24413972 | Msa1146620:intron | 35.0% |
| ! | AAGTTCTCATAGAGTTTGCT+CGG | + | chr7_4:24414007-24414026 | None:intergenic | 35.0% |
| CACTATTGACCCTACTTAAT+GGG | + | chr7_4:24414320-24414339 | None:intergenic | 35.0% | |
| ACACTATTGACCCTACTTAA+TGG | + | chr7_4:24414321-24414340 | None:intergenic | 35.0% | |
| ATGGACTTAACTCAGATTTG+TGG | - | chr7_4:24414410-24414429 | Msa1146620:CDS | 35.0% | |
| ! | GTGGTATTTTGTAAGGAGTA+AGG | - | chr7_4:24414429-24414448 | Msa1146620:CDS | 35.0% |
| ! | AGAAGACACTTATTAGGTTG+AGG | - | chr7_4:24414815-24414834 | Msa1146620:CDS | 35.0% |
| AGCAAGGAGATATTCATCTT+AGG | - | chr7_4:24414843-24414862 | Msa1146620:intron | 35.0% | |
| GGTTATTAAATGGGAGAGTT+TGG | - | chr7_4:24414864-24414883 | Msa1146620:intron | 35.0% | |
| TTGAAATGTACTCAGGTGAA+TGG | - | chr7_4:24414933-24414952 | Msa1146620:intron | 35.0% | |
| GAAGACAACAACTTGAAAGT+TGG | - | chr7_4:24414968-24414987 | Msa1146620:intron | 35.0% | |
| AAGGTAAGTATAGTGCTAGT+AGG | + | chr7_4:24415019-24415038 | None:intergenic | 35.0% | |
| CCTAAAGATGTGAACAATGA+AGG | + | chr7_4:24415038-24415057 | None:intergenic | 35.0% | |
| CCTTCATTGTTCACATCTTT+AGG | - | chr7_4:24415035-24415054 | Msa1146620:CDS | 35.0% | |
| TTACAAGGTTTCCTTGATGA+AGG | + | chr7_4:24413138-24413157 | None:intergenic | 35.0% | |
| TAAATGAGTGGAAGCTTACA+AGG | + | chr7_4:24413153-24413172 | None:intergenic | 35.0% | |
| GAAGATGTGCACTTCAAAAT+GGG | + | chr7_4:24413496-24413515 | None:intergenic | 35.0% | |
| ! | AAGATCGTTGAATACCCTTT+TGG | + | chr7_4:24413565-24413584 | None:intergenic | 35.0% |
| !! | AAAAGGGTATTCAACGATCT+TGG | - | chr7_4:24413564-24413583 | Msa1146620:intron | 35.0% |
| CTCCGAAAATGATGAAGATT+TGG | - | chr7_4:24413595-24413614 | Msa1146620:intron | 35.0% | |
| CTATTGCTTCCAATTTCACA+AGG | + | chr7_4:24413677-24413696 | None:intergenic | 35.0% | |
| CTGTGTTAAAGTCAGGAAAT+TGG | - | chr7_4:24413697-24413716 | Msa1146620:intron | 35.0% | |
| ! | GAATTTTGCAGGAAAGCAAT+TGG | - | chr7_4:24413953-24413972 | Msa1146620:intron | 35.0% |
| ! | AAGTTCTCATAGAGTTTGCT+CGG | + | chr7_4:24414007-24414026 | None:intergenic | 35.0% |
| CACTATTGACCCTACTTAAT+GGG | + | chr7_4:24414320-24414339 | None:intergenic | 35.0% | |
| ACACTATTGACCCTACTTAA+TGG | + | chr7_4:24414321-24414340 | None:intergenic | 35.0% | |
| ATGGACTTAACTCAGATTTG+TGG | - | chr7_4:24414410-24414429 | Msa1146620:CDS | 35.0% | |
| ! | GTGGTATTTTGTAAGGAGTA+AGG | - | chr7_4:24414429-24414448 | Msa1146620:CDS | 35.0% |
| ! | AGAAGACACTTATTAGGTTG+AGG | - | chr7_4:24414815-24414834 | Msa1146620:CDS | 35.0% |
| AGCAAGGAGATATTCATCTT+AGG | - | chr7_4:24414843-24414862 | Msa1146620:intron | 35.0% | |
| GGTTATTAAATGGGAGAGTT+TGG | - | chr7_4:24414864-24414883 | Msa1146620:intron | 35.0% | |
| TTGAAATGTACTCAGGTGAA+TGG | - | chr7_4:24414933-24414952 | Msa1146620:intron | 35.0% | |
| GAAGACAACAACTTGAAAGT+TGG | - | chr7_4:24414968-24414987 | Msa1146620:intron | 35.0% | |
| AAGGTAAGTATAGTGCTAGT+AGG | + | chr7_4:24415019-24415038 | None:intergenic | 35.0% | |
| CCTAAAGATGTGAACAATGA+AGG | + | chr7_4:24415038-24415057 | None:intergenic | 35.0% | |
| CCTTCATTGTTCACATCTTT+AGG | - | chr7_4:24415035-24415054 | Msa1146620:CDS | 35.0% | |
| TGTGATCAAAGCCTTCATCA+AGG | - | chr7_4:24413124-24413143 | Msa1146620:CDS | 40.0% | |
| GATGATGCCAAGAAAGTTTG+TGG | - | chr7_4:24413290-24413309 | Msa1146620:CDS | 40.0% | |
| AATTTCGACTTTGCACCACT+TGG | + | chr7_4:24413360-24413379 | None:intergenic | 40.0% | |
| TTTATCTCAAGGCCATCTTC+TGG | - | chr7_4:24413449-24413468 | Msa1146620:intron | 40.0% | |
| CGAAGATGTGCACTTCAAAA+TGG | + | chr7_4:24413497-24413516 | None:intergenic | 40.0% | |
| ! | TGGCTTCAACTCTTTGGAAA+GGG | + | chr7_4:24413545-24413564 | None:intergenic | 40.0% |
| ! | TTGGCTTCAACTCTTTGGAA+AGG | + | chr7_4:24413546-24413565 | None:intergenic | 40.0% |
| TCCAAAGAGTTGAAGCCAAA+AGG | - | chr7_4:24413547-24413566 | Msa1146620:intron | 40.0% | |
| CCAAAGAGTTGAAGCCAAAA+GGG | - | chr7_4:24413548-24413567 | Msa1146620:intron | 40.0% | |
| GCAATAGCTGTGTTAAAGTC+AGG | - | chr7_4:24413690-24413709 | Msa1146620:intron | 40.0% | |
| CAAGCAGCATCAATGTATGA+TGG | + | chr7_4:24414059-24414078 | None:intergenic | 40.0% | |
| ! | CATTGATGCTGCTTGTAATC+TGG | - | chr7_4:24414064-24414083 | Msa1146620:CDS | 40.0% |
| ATCTGGTAAGCTGCAAACAA+AGG | - | chr7_4:24414081-24414100 | Msa1146620:CDS | 40.0% | |
| GGCTGAACTTCAGATTATCA+GGG | + | chr7_4:24414191-24414210 | None:intergenic | 40.0% | |
| GGCTAGGTTATACTTCTTCA+CGG | + | chr7_4:24414212-24414231 | None:intergenic | 40.0% | |
| !! | TTTTCAAGGGCGAATCATTC+AGG | + | chr7_4:24414270-24414289 | None:intergenic | 40.0% |
| CAGAACATACCAAGTGAGTT+TGG | - | chr7_4:24414791-24414810 | Msa1146620:CDS | 40.0% | |
| TGTCTTCTACCAAACTCACT+TGG | + | chr7_4:24414803-24414822 | None:intergenic | 40.0% | |
| !! | TTAGGTTGAGGCAAAAAGCA+AGG | - | chr7_4:24414827-24414846 | Msa1146620:CDS | 40.0% |
| TTCCTAATTAGGTACCTTGC+AGG | + | chr7_4:24414890-24414909 | None:intergenic | 40.0% | |
| ! | GCAAGGTACCTAATTAGGAA+AGG | - | chr7_4:24414890-24414909 | Msa1146620:intron | 40.0% |
| TGTGATCAAAGCCTTCATCA+AGG | - | chr7_4:24413124-24413143 | Msa1146620:CDS | 40.0% | |
| GATGATGCCAAGAAAGTTTG+TGG | - | chr7_4:24413290-24413309 | Msa1146620:CDS | 40.0% | |
| AATTTCGACTTTGCACCACT+TGG | + | chr7_4:24413360-24413379 | None:intergenic | 40.0% | |
| TTTATCTCAAGGCCATCTTC+TGG | - | chr7_4:24413449-24413468 | Msa1146620:intron | 40.0% | |
| CGAAGATGTGCACTTCAAAA+TGG | + | chr7_4:24413497-24413516 | None:intergenic | 40.0% | |
| ! | TGGCTTCAACTCTTTGGAAA+GGG | + | chr7_4:24413545-24413564 | None:intergenic | 40.0% |
| ! | TTGGCTTCAACTCTTTGGAA+AGG | + | chr7_4:24413546-24413565 | None:intergenic | 40.0% |
| TCCAAAGAGTTGAAGCCAAA+AGG | - | chr7_4:24413547-24413566 | Msa1146620:intron | 40.0% | |
| CCAAAGAGTTGAAGCCAAAA+GGG | - | chr7_4:24413548-24413567 | Msa1146620:intron | 40.0% | |
| GCAATAGCTGTGTTAAAGTC+AGG | - | chr7_4:24413690-24413709 | Msa1146620:intron | 40.0% | |
| CAAGCAGCATCAATGTATGA+TGG | + | chr7_4:24414059-24414078 | None:intergenic | 40.0% | |
| ! | CATTGATGCTGCTTGTAATC+TGG | - | chr7_4:24414064-24414083 | Msa1146620:CDS | 40.0% |
| ATCTGGTAAGCTGCAAACAA+AGG | - | chr7_4:24414081-24414100 | Msa1146620:CDS | 40.0% | |
| GGCTGAACTTCAGATTATCA+GGG | + | chr7_4:24414191-24414210 | None:intergenic | 40.0% | |
| GGCTAGGTTATACTTCTTCA+CGG | + | chr7_4:24414212-24414231 | None:intergenic | 40.0% | |
| !! | TTTTCAAGGGCGAATCATTC+AGG | + | chr7_4:24414270-24414289 | None:intergenic | 40.0% |
| CAGAACATACCAAGTGAGTT+TGG | - | chr7_4:24414791-24414810 | Msa1146620:CDS | 40.0% | |
| TGTCTTCTACCAAACTCACT+TGG | + | chr7_4:24414803-24414822 | None:intergenic | 40.0% | |
| !! | TTAGGTTGAGGCAAAAAGCA+AGG | - | chr7_4:24414827-24414846 | Msa1146620:CDS | 40.0% |
| TTCCTAATTAGGTACCTTGC+AGG | + | chr7_4:24414890-24414909 | None:intergenic | 40.0% | |
| ! | GCAAGGTACCTAATTAGGAA+AGG | - | chr7_4:24414890-24414909 | Msa1146620:intron | 40.0% |
| !!! | CCCTTTTGGCTTCAACTCTT+TGG | + | chr7_4:24413551-24413570 | None:intergenic | 45.0% |
| ! | AGGGTGTGCTTGAATTTTGC+AGG | - | chr7_4:24413942-24413961 | Msa1146620:intron | 45.0% |
| ! | CATAGAGTTTGCTCGGTCAA+AGG | + | chr7_4:24414000-24414019 | None:intergenic | 45.0% |
| CGCATGACAGCAATAAAGGA+TGG | + | chr7_4:24414035-24414054 | None:intergenic | 45.0% | |
| TGGACGCATGACAGCAATAA+AGG | + | chr7_4:24414039-24414058 | None:intergenic | 45.0% | |
| ! | TGTGTTAATCCTCTGGTTCC+TGG | - | chr7_4:24414155-24414174 | Msa1146620:CDS | 45.0% |
| ! | GTGTTAATCCTCTGGTTCCT+GGG | - | chr7_4:24414156-24414175 | Msa1146620:CDS | 45.0% |
| CGGCTGAACTTCAGATTATC+AGG | + | chr7_4:24414192-24414211 | None:intergenic | 45.0% | |
| !!! | GGGTGGAACAATTTTTGGCT+AGG | + | chr7_4:24414228-24414247 | None:intergenic | 45.0% |
| GTTCCACCCAAAATCGAACT+CGG | - | chr7_4:24414239-24414258 | Msa1146620:intron | 45.0% | |
| TTCCACCCAAAATCGAACTC+GGG | - | chr7_4:24414240-24414259 | Msa1146620:intron | 45.0% | |
| ! | GAGAACCCGAGTTCGATTTT+GGG | + | chr7_4:24414248-24414267 | None:intergenic | 45.0% |
| !!! | CCCTTTTGGCTTCAACTCTT+TGG | + | chr7_4:24413551-24413570 | None:intergenic | 45.0% |
| ! | AGGGTGTGCTTGAATTTTGC+AGG | - | chr7_4:24413942-24413961 | Msa1146620:intron | 45.0% |
| ! | CATAGAGTTTGCTCGGTCAA+AGG | + | chr7_4:24414000-24414019 | None:intergenic | 45.0% |
| CGCATGACAGCAATAAAGGA+TGG | + | chr7_4:24414035-24414054 | None:intergenic | 45.0% | |
| TGGACGCATGACAGCAATAA+AGG | + | chr7_4:24414039-24414058 | None:intergenic | 45.0% | |
| ! | TGTGTTAATCCTCTGGTTCC+TGG | - | chr7_4:24414155-24414174 | Msa1146620:CDS | 45.0% |
| ! | GTGTTAATCCTCTGGTTCCT+GGG | - | chr7_4:24414156-24414175 | Msa1146620:CDS | 45.0% |
| CGGCTGAACTTCAGATTATC+AGG | + | chr7_4:24414192-24414211 | None:intergenic | 45.0% | |
| !!! | GGGTGGAACAATTTTTGGCT+AGG | + | chr7_4:24414228-24414247 | None:intergenic | 45.0% |
| GTTCCACCCAAAATCGAACT+CGG | - | chr7_4:24414239-24414258 | Msa1146620:intron | 45.0% | |
| TTCCACCCAAAATCGAACTC+GGG | - | chr7_4:24414240-24414259 | Msa1146620:intron | 45.0% | |
| ! | GAGAACCCGAGTTCGATTTT+GGG | + | chr7_4:24414248-24414267 | None:intergenic | 45.0% |
| !!! | ATATTTAATCTTTTTTATTT+TGG | - | chr7_4:24414461-24414480 | Msa1146620:CDS | 5.0% |
| !!! | TATTTAATCTTTTTTATTTT+GGG | - | chr7_4:24414462-24414481 | Msa1146620:CDS | 5.0% |
| !!! | TTTTTTTTTTTTAAGAAAAT+TGG | - | chr7_4:24414516-24414535 | Msa1146620:CDS | 5.0% |
| !!! | ATATTTAATCTTTTTTATTT+TGG | - | chr7_4:24414461-24414480 | Msa1146620:CDS | 5.0% |
| !!! | TATTTAATCTTTTTTATTTT+GGG | - | chr7_4:24414462-24414481 | Msa1146620:CDS | 5.0% |
| !!! | TTTTTTTTTTTTAAGAAAAT+TGG | - | chr7_4:24414516-24414535 | Msa1146620:CDS | 5.0% |
| ! | AACCCGAGTTCGATTTTGGG+TGG | + | chr7_4:24414245-24414264 | None:intergenic | 50.0% |
| ! | GGAGAACCCGAGTTCGATTT+TGG | + | chr7_4:24414249-24414268 | None:intergenic | 50.0% |
| ! | GGCCTGCAAGGTACCTAATT+AGG | - | chr7_4:24414885-24414904 | Msa1146620:intron | 50.0% |
| ! | AACCCGAGTTCGATTTTGGG+TGG | + | chr7_4:24414245-24414264 | None:intergenic | 50.0% |
| ! | GGAGAACCCGAGTTCGATTT+TGG | + | chr7_4:24414249-24414268 | None:intergenic | 50.0% |
| ! | GGCCTGCAAGGTACCTAATT+AGG | - | chr7_4:24414885-24414904 | Msa1146620:intron | 50.0% |
| ! | ATCCTCTGGTTCCTGGGAGA+AGG | - | chr7_4:24414162-24414181 | Msa1146620:CDS | 55.0% |
| ! | TCCTCTGGTTCCTGGGAGAA+GGG | - | chr7_4:24414163-24414182 | Msa1146620:CDS | 55.0% |
| ATGGGAGAGTTTGGCCTGCA+AGG | - | chr7_4:24414873-24414892 | Msa1146620:intron | 55.0% | |
| ! | ATCCTCTGGTTCCTGGGAGA+AGG | - | chr7_4:24414162-24414181 | Msa1146620:CDS | 55.0% |
| ! | TCCTCTGGTTCCTGGGAGAA+GGG | - | chr7_4:24414163-24414182 | Msa1146620:CDS | 55.0% |
| ATGGGAGAGTTTGGCCTGCA+AGG | - | chr7_4:24414873-24414892 | Msa1146620:intron | 55.0% | |
| ! | CCTCTGGTTCCTGGGAGAAG+GGG | - | chr7_4:24414164-24414183 | Msa1146620:CDS | 60.0% |
| ! | CTCTGGTTCCTGGGAGAAGG+GGG | - | chr7_4:24414165-24414184 | Msa1146620:intron | 60.0% |
| ! | CCTCTGGTTCCTGGGAGAAG+GGG | - | chr7_4:24414164-24414183 | Msa1146620:CDS | 60.0% |
| ! | CTCTGGTTCCTGGGAGAAGG+GGG | - | chr7_4:24414165-24414184 | Msa1146620:intron | 60.0% |
| CCCCTTCTCCCAGGAACCAG+AGG | + | chr7_4:24414167-24414186 | None:intergenic | 65.0% | |
| TATCAGGGCCCCCTTCTCCC+AGG | + | chr7_4:24414176-24414195 | None:intergenic | 65.0% | |
| CCCCTTCTCCCAGGAACCAG+AGG | + | chr7_4:24414167-24414186 | None:intergenic | 65.0% | |
| TATCAGGGCCCCCTTCTCCC+AGG | + | chr7_4:24414176-24414195 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 24413075 | 24415072 | 24413075 | ID=Msa1146620;Name=Msa1146620 |
| chr7_4 | mRNA | 24413075 | 24415072 | 24413075 | ID=Msa1146620-mRNA-1;Parent=Msa1146620;Name=Msa1146620-mRNA-1;_AED=0.07;_eAED=0.10;_QI=7|0|0|1|0.4|0.5|6|0|291 |
| chr7_4 | exon | 24414994 | 24415072 | 24414994 | ID=Msa1146620-mRNA-1:exon:6099;Parent=Msa1146620-mRNA-1 |
| chr7_4 | exon | 24414644 | 24414856 | 24414644 | ID=Msa1146620-mRNA-1:exon:6098;Parent=Msa1146620-mRNA-1 |
| chr7_4 | exon | 24414386 | 24414578 | 24414386 | ID=Msa1146620-mRNA-1:exon:6097;Parent=Msa1146620-mRNA-1 |
| chr7_4 | exon | 24414062 | 24414183 | 24414062 | ID=Msa1146620-mRNA-1:exon:6096;Parent=Msa1146620-mRNA-1 |
| chr7_4 | exon | 24413317 | 24413353 | 24413317 | ID=Msa1146620-mRNA-1:exon:6095;Parent=Msa1146620-mRNA-1 |
| chr7_4 | exon | 24413075 | 24413310 | 24413075 | ID=Msa1146620-mRNA-1:exon:6094;Parent=Msa1146620-mRNA-1 |
| chr7_4 | five_prime_UTR | 24415066 | 24415072 | 24415066 | ID=Msa1146620-mRNA-1:five_prime_utr;Parent=Msa1146620-mRNA-1 |
| chr7_4 | CDS | 24414994 | 24415065 | 24414994 | ID=Msa1146620-mRNA-1:cds;Parent=Msa1146620-mRNA-1 |
| chr7_4 | CDS | 24414644 | 24414856 | 24414644 | ID=Msa1146620-mRNA-1:cds;Parent=Msa1146620-mRNA-1 |
| chr7_4 | CDS | 24414386 | 24414578 | 24414386 | ID=Msa1146620-mRNA-1:cds;Parent=Msa1146620-mRNA-1 |
| chr7_4 | CDS | 24414062 | 24414183 | 24414062 | ID=Msa1146620-mRNA-1:cds;Parent=Msa1146620-mRNA-1 |
| chr7_4 | CDS | 24413317 | 24413353 | 24413317 | ID=Msa1146620-mRNA-1:cds;Parent=Msa1146620-mRNA-1 |
| chr7_4 | CDS | 24413075 | 24413310 | 24413075 | ID=Msa1146620-mRNA-1:cds;Parent=Msa1146620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
