Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146800 | AES78893.2 | 82.407 | 324 | 55 | 1 | 1 | 322 | 1 | 324 | 0.0 | 549 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146800 | sp|Q8L3W1|VRN1_ARATH | 26.923 | 338 | 195 | 5 | 13 | 305 | 6 | 336 | 2.43e-32 | 125 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146800 | G7KVW6 | 82.407 | 324 | 55 | 1 | 1 | 322 | 1 | 324 | 0.0 | 549 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1146800 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146800 | MtrunA17_Chr7g0233561 | 82.407 | 324 | 55 | 1 | 1 | 322 | 6 | 329 | 0.0 | 549 |
| Msa1146800 | MtrunA17_Chr3g0131891 | 70.807 | 322 | 86 | 2 | 1 | 322 | 7 | 320 | 3.77e-161 | 452 |
| Msa1146800 | MtrunA17_Chr7g0233541 | 72.910 | 299 | 75 | 5 | 28 | 322 | 1 | 297 | 2.42e-151 | 426 |
| Msa1146800 | MtrunA17_Chr7g0233531 | 72.203 | 295 | 67 | 3 | 28 | 322 | 1 | 280 | 1.35e-141 | 401 |
| Msa1146800 | MtrunA17_Chr7g0233521 | 68.243 | 296 | 77 | 4 | 28 | 322 | 1 | 280 | 1.74e-135 | 385 |
| Msa1146800 | MtrunA17_Chr7g0233571 | 60.280 | 214 | 80 | 3 | 7 | 216 | 4 | 216 | 3.05e-82 | 248 |
| Msa1146800 | MtrunA17_Chr8g0390841 | 37.061 | 313 | 161 | 8 | 11 | 305 | 37 | 331 | 1.97e-53 | 182 |
| Msa1146800 | MtrunA17_Chr8g0390841 | 25.641 | 312 | 178 | 13 | 13 | 305 | 242 | 518 | 2.96e-13 | 70.1 |
| Msa1146800 | MtrunA17_Chr1g0208771 | 35.880 | 301 | 159 | 10 | 21 | 305 | 8 | 290 | 6.13e-48 | 167 |
| Msa1146800 | MtrunA17_Chr1g0163071 | 34.615 | 312 | 145 | 9 | 28 | 305 | 1 | 287 | 3.15e-46 | 159 |
| Msa1146800 | MtrunA17_Chr3g0103181 | 33.333 | 300 | 166 | 11 | 10 | 304 | 9 | 279 | 1.57e-40 | 143 |
| Msa1146800 | MtrunA17_Chr3g0103151 | 56.311 | 103 | 43 | 1 | 10 | 112 | 9 | 109 | 8.34e-35 | 124 |
| Msa1146800 | MtrunA17_Chr1g0163231 | 31.148 | 305 | 166 | 10 | 10 | 303 | 6 | 277 | 3.73e-34 | 126 |
| Msa1146800 | MtrunA17_Chr1g0163251 | 32.258 | 310 | 175 | 10 | 13 | 315 | 9 | 290 | 1.81e-33 | 127 |
| Msa1146800 | MtrunA17_Chr3g0103191 | 54.369 | 103 | 45 | 1 | 10 | 112 | 9 | 109 | 2.16e-33 | 123 |
| Msa1146800 | MtrunA17_Chr1g0163181 | 31.818 | 286 | 173 | 9 | 27 | 303 | 19 | 291 | 2.96e-33 | 127 |
| Msa1146800 | MtrunA17_Chr3g0103171 | 29.329 | 283 | 170 | 8 | 29 | 304 | 6 | 265 | 5.76e-33 | 122 |
| Msa1146800 | MtrunA17_Chr1g0171611 | 33.115 | 305 | 148 | 11 | 10 | 303 | 6 | 265 | 1.46e-32 | 122 |
| Msa1146800 | MtrunA17_Chr1g0163261 | 29.653 | 317 | 189 | 6 | 10 | 318 | 6 | 296 | 1.82e-31 | 119 |
| Msa1146800 | MtrunA17_Chr4g0067431 | 31.148 | 305 | 193 | 9 | 11 | 304 | 13 | 311 | 2.29e-30 | 117 |
| Msa1146800 | MtrunA17_Chr1g0163221 | 29.758 | 289 | 182 | 9 | 7 | 291 | 5 | 276 | 3.81e-29 | 114 |
| Msa1146800 | MtrunA17_Chr5g0419201 | 38.519 | 135 | 76 | 1 | 13 | 147 | 16 | 143 | 7.25e-29 | 109 |
| Msa1146800 | MtrunA17_Chr1g0154161 | 27.564 | 312 | 195 | 10 | 11 | 313 | 28 | 317 | 2.61e-28 | 111 |
| Msa1146800 | MtrunA17_Chr1g0163201 | 30.272 | 294 | 167 | 7 | 26 | 305 | 16 | 285 | 6.48e-27 | 109 |
| Msa1146800 | MtrunA17_Chr3g0077451 | 25.862 | 290 | 145 | 6 | 27 | 308 | 10 | 237 | 3.02e-26 | 104 |
| Msa1146800 | MtrunA17_Chr5g0429931 | 26.736 | 288 | 150 | 6 | 29 | 308 | 11 | 245 | 1.25e-25 | 102 |
| Msa1146800 | MtrunA17_Chr1g0154131 | 28.669 | 293 | 184 | 7 | 12 | 292 | 178 | 457 | 2.90e-25 | 105 |
| Msa1146800 | MtrunA17_Chr1g0154131 | 25.926 | 297 | 167 | 8 | 12 | 301 | 20 | 270 | 2.51e-15 | 76.3 |
| Msa1146800 | MtrunA17_Chr3g0077411 | 26.623 | 308 | 169 | 10 | 11 | 308 | 260 | 520 | 3.55e-23 | 99.8 |
| Msa1146800 | MtrunA17_Chr3g0077411 | 31.967 | 122 | 79 | 1 | 6 | 127 | 18 | 135 | 5.25e-16 | 78.6 |
| Msa1146800 | MtrunA17_Chr1g0154171 | 23.964 | 338 | 197 | 8 | 11 | 304 | 21 | 342 | 1.21e-22 | 96.7 |
| Msa1146800 | MtrunA17_Chr6g0467351 | 43.810 | 105 | 58 | 1 | 11 | 114 | 13 | 117 | 6.16e-22 | 92.4 |
| Msa1146800 | MtrunA17_Chr1g0154111 | 25.301 | 332 | 200 | 5 | 11 | 297 | 24 | 352 | 8.95e-22 | 95.9 |
| Msa1146800 | MtrunA17_Chr1g0154071 | 27.616 | 344 | 186 | 11 | 17 | 310 | 159 | 489 | 3.31e-21 | 94.0 |
| Msa1146800 | MtrunA17_Chr1g0154071 | 28.689 | 122 | 77 | 3 | 14 | 132 | 28 | 142 | 3.25e-11 | 63.9 |
| Msa1146800 | MtrunA17_Chr1g0163131 | 27.414 | 321 | 180 | 12 | 6 | 301 | 11 | 303 | 5.37e-21 | 91.3 |
| Msa1146800 | MtrunA17_Chr3g0103201 | 29.960 | 247 | 136 | 10 | 68 | 304 | 1 | 220 | 1.37e-20 | 88.6 |
| Msa1146800 | MtrunA17_Chr1g0154041 | 25.915 | 355 | 207 | 10 | 8 | 314 | 11 | 357 | 1.69e-20 | 92.0 |
| Msa1146800 | MtrunA17_Chr1g0162441 | 35.036 | 137 | 82 | 1 | 13 | 149 | 7 | 136 | 2.56e-20 | 90.9 |
| Msa1146800 | MtrunA17_Chr1g0162441 | 32.836 | 134 | 84 | 2 | 178 | 311 | 271 | 398 | 2.50e-15 | 76.3 |
| Msa1146800 | MtrunA17_Chr4g0033961 | 38.384 | 99 | 61 | 0 | 13 | 111 | 6 | 104 | 2.04e-19 | 88.2 |
| Msa1146800 | MtrunA17_Chr4g0033961 | 33.835 | 133 | 82 | 2 | 178 | 310 | 267 | 393 | 1.61e-15 | 77.0 |
| Msa1146800 | MtrunA17_Chr3g0077461 | 28.720 | 289 | 143 | 9 | 4 | 292 | 230 | 455 | 2.07e-19 | 88.6 |
| Msa1146800 | MtrunA17_Chr3g0077461 | 24.194 | 310 | 191 | 10 | 29 | 301 | 23 | 325 | 1.68e-15 | 77.0 |
| Msa1146800 | MtrunA17_Chr1g0154151 | 24.585 | 301 | 193 | 7 | 22 | 297 | 16 | 307 | 2.56e-19 | 87.0 |
| Msa1146800 | MtrunA17_Chr3g0077431 | 26.154 | 260 | 122 | 6 | 57 | 308 | 1 | 198 | 5.40e-19 | 83.6 |
| Msa1146800 | MtrunA17_Chr1g0154191 | 24.566 | 346 | 195 | 9 | 11 | 303 | 20 | 352 | 7.25e-19 | 86.3 |
| Msa1146800 | MtrunA17_Chr1g0163101 | 42.857 | 105 | 57 | 2 | 8 | 112 | 12 | 113 | 1.81e-18 | 81.6 |
| Msa1146800 | MtrunA17_Chr1g0163241 | 44.118 | 102 | 51 | 3 | 17 | 117 | 14 | 110 | 2.05e-17 | 78.6 |
| Msa1146800 | MtrunA17_Chr1g0163191 | 42.453 | 106 | 54 | 3 | 13 | 117 | 9 | 108 | 5.59e-17 | 77.0 |
| Msa1146800 | MtrunA17_Chr3g0077361 | 24.113 | 282 | 146 | 7 | 12 | 292 | 39 | 253 | 8.50e-17 | 80.9 |
| Msa1146800 | MtrunA17_Chr1g0163121 | 48.315 | 89 | 43 | 2 | 27 | 115 | 9 | 94 | 1.15e-16 | 75.9 |
| Msa1146800 | MtrunA17_Chr1g0163061 | 40.000 | 105 | 62 | 1 | 11 | 114 | 13 | 117 | 3.03e-16 | 77.4 |
| Msa1146800 | MtrunA17_Chr1g0162411 | 37.255 | 102 | 64 | 0 | 13 | 114 | 7 | 108 | 4.62e-16 | 78.6 |
| Msa1146800 | MtrunA17_Chr1g0163141 | 47.778 | 90 | 42 | 4 | 27 | 115 | 9 | 94 | 4.97e-16 | 75.1 |
| Msa1146800 | MtrunA17_Chr6g0476181 | 47.059 | 85 | 42 | 2 | 28 | 112 | 1 | 82 | 2.21e-15 | 72.8 |
| Msa1146800 | MtrunA17_Chr4g0009491 | 33.051 | 118 | 79 | 0 | 12 | 129 | 224 | 341 | 3.48e-15 | 75.9 |
| Msa1146800 | MtrunA17_Chr4g0009491 | 29.655 | 145 | 95 | 3 | 27 | 168 | 11 | 151 | 6.96e-14 | 72.0 |
| Msa1146800 | MtrunA17_Chr3g0077381 | 28.931 | 159 | 106 | 3 | 27 | 182 | 34 | 188 | 5.88e-15 | 75.1 |
| Msa1146800 | MtrunA17_Chr3g0077381 | 32.203 | 118 | 80 | 0 | 12 | 129 | 246 | 363 | 2.47e-13 | 70.5 |
| Msa1146800 | MtrunA17_Chr1g0154101 | 36.957 | 92 | 58 | 0 | 11 | 102 | 23 | 114 | 1.51e-14 | 74.3 |
| Msa1146800 | MtrunA17_Chr1g0154101 | 35.922 | 103 | 63 | 3 | 11 | 112 | 182 | 282 | 3.70e-12 | 67.4 |
| Msa1146800 | MtrunA17_Chr1g0154251 | 37.374 | 99 | 60 | 2 | 11 | 108 | 25 | 122 | 3.64e-14 | 73.2 |
| Msa1146800 | MtrunA17_Chr1g0154211 | 36.957 | 92 | 57 | 1 | 11 | 102 | 21 | 111 | 4.14e-14 | 72.4 |
| Msa1146800 | MtrunA17_Chr1g0163111 | 40.777 | 103 | 56 | 3 | 203 | 305 | 14 | 111 | 2.45e-12 | 65.5 |
| Msa1146800 | MtrunA17_Chr1g0154241 | 33.696 | 92 | 60 | 1 | 11 | 102 | 20 | 110 | 3.73e-12 | 65.9 |
| Msa1146800 | MtrunA17_Chr1g0163091 | 37.719 | 114 | 60 | 4 | 203 | 313 | 22 | 127 | 5.36e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1146800 | AT3G18990.2 | 26.979 | 341 | 197 | 5 | 13 | 308 | 6 | 339 | 1.53e-33 | 127 |
| Msa1146800 | AT3G18990.1 | 26.923 | 338 | 195 | 5 | 13 | 305 | 6 | 336 | 2.47e-33 | 125 |
| Msa1146800 | AT4G33280.1 | 28.313 | 332 | 185 | 13 | 12 | 313 | 19 | 327 | 1.06e-22 | 97.1 |
| Msa1146800 | AT1G49475.1 | 40.741 | 108 | 63 | 1 | 13 | 120 | 34 | 140 | 9.97e-22 | 91.3 |
| Msa1146800 | AT4G01580.1 | 41.346 | 104 | 61 | 0 | 13 | 116 | 30 | 133 | 1.79e-21 | 90.5 |
| Msa1146800 | AT3G18960.2 | 40.385 | 104 | 62 | 0 | 13 | 116 | 30 | 133 | 2.57e-20 | 87.4 |
| Msa1146800 | AT3G18960.1 | 40.385 | 104 | 62 | 0 | 13 | 116 | 30 | 133 | 2.81e-20 | 87.8 |
| Msa1146800 | AT3G18960.3 | 43.182 | 88 | 50 | 0 | 29 | 116 | 9 | 96 | 3.83e-17 | 78.2 |
| Msa1146800 | AT4G33280.2 | 38.000 | 100 | 58 | 2 | 12 | 107 | 19 | 118 | 1.88e-13 | 70.1 |
| Msa1146800 | AT4G33280.3 | 38.000 | 100 | 58 | 2 | 12 | 107 | 19 | 118 | 3.33e-13 | 70.1 |
| Msa1146800 | AT3G53310.1 | 31.405 | 121 | 75 | 4 | 3 | 122 | 2 | 115 | 2.36e-12 | 67.0 |
| Msa1146800 | AT1G49480.3 | 31.298 | 131 | 83 | 3 | 175 | 305 | 98 | 221 | 2.98e-11 | 62.8 |
| Msa1146800 | AT1G49480.1 | 31.298 | 131 | 83 | 3 | 175 | 305 | 98 | 221 | 2.98e-11 | 62.8 |
| Msa1146800 | AT1G49480.2 | 31.298 | 131 | 83 | 3 | 175 | 305 | 98 | 221 | 2.98e-11 | 62.8 |
Find 54 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAAAATGGAAATTAAATT+TGG | 0.157556 | 7_4:+24855136 | Msa1146800:CDS |
| AAAGATTTGTACCTCAAATT+TGG | 0.180864 | 7_4:-24855264 | None:intergenic |
| TTTCACCAACAATGTGAAAT+TGG | 0.216826 | 7_4:+24855425 | Msa1146800:CDS |
| AAATTTGAGGTACAAATCTT+TGG | 0.253897 | 7_4:+24855266 | Msa1146800:CDS |
| GGTTTCCTTGGAGAAGGTTT+TGG | 0.257981 | 7_4:-24852694 | None:intergenic |
| GTCTTTAGACATATAGCTTT+TGG | 0.314158 | 7_4:-24855104 | None:intergenic |
| TGCTTCCAATTTCACATTGT+TGG | 0.330011 | 7_4:-24855430 | None:intergenic |
| AGACTCCAAATGGTGCAAAA+TGG | 0.337543 | 7_4:+24855123 | Msa1146800:CDS |
| GAGAGGAGATATTAAACTTC+AGG | 0.349333 | 7_4:+24856416 | Msa1146800:CDS |
| AGGTGTTGAATGGGAGAGTT+TGG | 0.366825 | 7_4:+24856436 | Msa1146800:CDS |
| GGTTTATTTCCTTGACCATT+GGG | 0.369401 | 7_4:-24855344 | None:intergenic |
| CGTTGAACACCACTTTCTTC+CGG | 0.401759 | 7_4:+24855884 | Msa1146800:CDS |
| ATTAAACTTCAGGTGTTGAA+TGG | 0.414784 | 7_4:+24856426 | Msa1146800:CDS |
| AAAAGAGTGATGGCAAGATA+TGG | 0.414999 | 7_4:+24855159 | Msa1146800:CDS |
| GGTCTGCTAGATATTCTATC+AGG | 0.427126 | 7_4:+24856457 | Msa1146800:CDS |
| AATCTTTGGAAAGAGTGCTT+TGG | 0.429279 | 7_4:+24855280 | Msa1146800:CDS |
| GATGATGCCAAGAAAGTTTG+TGG | 0.433802 | 7_4:+24855061 | Msa1146800:intron |
| AAAGGCTTACAAGGTTTCCT+TGG | 0.438933 | 7_4:-24852706 | None:intergenic |
| AGGTTTATTTCCTTGACCAT+TGG | 0.465960 | 7_4:-24855345 | None:intergenic |
| TCTATCAGGATGTGCGCTAA+AGG | 0.479816 | 7_4:+24856471 | Msa1146800:CDS |
| AGATATGGTTTGAGAAGGGT+TGG | 0.481735 | 7_4:+24855174 | Msa1146800:CDS |
| TTAAACTTCAGGTGTTGAAT+GGG | 0.486353 | 7_4:+24856427 | Msa1146800:CDS |
| AAGGACAATAACTTGAAAGT+TGG | 0.499244 | 7_4:+24856534 | Msa1146800:CDS |
| ATTGTTTAACATTTCAGAGT+AGG | 0.512018 | 7_4:+24856643 | Msa1146800:CDS |
| TTACAAGGTTTCCTTGGAGA+AGG | 0.514232 | 7_4:-24852700 | None:intergenic |
| ATATGTCTAAAGACTCCAAA+TGG | 0.517821 | 7_4:+24855113 | Msa1146800:CDS |
| ACATTGTTGGTGAAATTCAA+AGG | 0.523282 | 7_4:-24855417 | None:intergenic |
| TTTGCAGAGCATCACTCTCT+AGG | 0.527747 | 7_4:+24855203 | Msa1146800:CDS |
| TTAAATTTGGAAAAGAGTGA+TGG | 0.536531 | 7_4:+24855149 | Msa1146800:CDS |
| CAAAAGAGTTGAAGCTCAGA+AGG | 0.539435 | 7_4:+24855319 | Msa1146800:CDS |
| TCTAAAGATATGAACAATGA+AGG | 0.545794 | 7_4:-24856598 | None:intergenic |
| TGGCAAGATATGGTTTGAGA+AGG | 0.555350 | 7_4:+24855169 | Msa1146800:CDS |
| AAAACATGGAAAGTCGCAAA+AGG | 0.558949 | 7_4:+24855463 | Msa1146800:CDS |
| CAGAAGGTCCCCAATGGTCA+AGG | 0.561936 | 7_4:+24855335 | Msa1146800:CDS |
| GTTTATTTCCTTGACCATTG+GGG | 0.564572 | 7_4:-24855343 | None:intergenic |
| CTAAAATTTGAACTCACAAG+TGG | 0.566527 | 7_4:+24856495 | Msa1146800:CDS |
| TGAACTCACAAGTGGATGGA+AGG | 0.567593 | 7_4:+24856503 | Msa1146800:CDS |
| CTCATGACAACAACAAAGGA+TGG | 0.571041 | 7_4:-24855852 | None:intergenic |
| TGCAGCTTACCGGAAGAAAG+TGG | 0.589285 | 7_4:-24855893 | None:intergenic |
| GAGCATCACTCTCTAGGTCA+TGG | 0.595626 | 7_4:+24855209 | Msa1146800:CDS |
| AATTTGAACTCACAAGTGGA+TGG | 0.599548 | 7_4:+24856499 | Msa1146800:CDS |
| TTTGATTTGAATAAGAAGAG+AGG | 0.602796 | 7_4:+24856399 | Msa1146800:CDS |
| GGCAAGATATGGTTTGAGAA+GGG | 0.606783 | 7_4:+24855170 | Msa1146800:CDS |
| ACATGGAAAGTCGCAAAAGG+TGG | 0.608889 | 7_4:+24855466 | Msa1146800:CDS |
| AGCATTACTTGTGTAAAACA+TGG | 0.620555 | 7_4:+24855449 | Msa1146800:CDS |
| CTTACCCAAAACCTTCTCCA+AGG | 0.638528 | 7_4:+24852689 | Msa1146800:CDS |
| TGGATGGAAGGCATTTGCAA+AGG | 0.640290 | 7_4:+24856515 | Msa1146800:CDS |
| TGTGTCTTACAAAACAAGGA+TGG | 0.644962 | 7_4:-24856375 | None:intergenic |
| GAAGCTCAGAAGGTCCCCAA+TGG | 0.645918 | 7_4:+24855329 | Msa1146800:CDS |
| CAAATTGATAGAATGTCCAA+AGG | 0.647085 | 7_4:+24855497 | Msa1146800:CDS |
| AAAGTGTGTCTTACAAAACA+AGG | 0.647663 | 7_4:-24856379 | None:intergenic |
| CAAGGAAATAAACCTCCGAA+TGG | 0.648381 | 7_4:+24855353 | Msa1146800:CDS |
| TGCACTCATGACAACAACAA+AGG | 0.665197 | 7_4:-24855856 | None:intergenic |
| CATGGCTAGTGAAATTGCTG+AGG | 0.726199 | 7_4:+24852637 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATGTTTTTAGTTTTTTAT+GGG | - | chr7_4:24853459-24853478 | None:intergenic | 10.0% |
| !!! | AAATTATTTTACATTACTTT+AGG | - | chr7_4:24855001-24855020 | None:intergenic | 10.0% |
| !!! | ATATTAACATTTTTATTTTC+TGG | + | chr7_4:24855603-24855622 | Msa1146800:intron | 10.0% |
| !! | CAATAAATAAATAACAGTAA+AGG | - | chr7_4:24852727-24852746 | None:intergenic | 15.0% |
| !! | TTTCAAAAAAAAAAATGTCA+TGG | - | chr7_4:24852892-24852911 | None:intergenic | 15.0% |
| !! | AAAAGATAATTAATATGTCA+TGG | - | chr7_4:24852925-24852944 | None:intergenic | 15.0% |
| !! | CAAAAAAATGCATAAAAATA+AGG | - | chr7_4:24853117-24853136 | None:intergenic | 15.0% |
| !!! | CAAATGTTTTTAGTTTTTTA+TGG | - | chr7_4:24853460-24853479 | None:intergenic | 15.0% |
| !! | AGTTATATCATTCATATTAA+TGG | + | chr7_4:24855023-24855042 | Msa1146800:intron | 15.0% |
| !! | TTAGAATAACTTTAATTAGT+TGG | + | chr7_4:24855676-24855695 | Msa1146800:intron | 15.0% |
| !!! | GGTGTTTTAATTTTTATTTT+TGG | - | chr7_4:24856296-24856315 | None:intergenic | 15.0% |
| !! | AATGAAAAAAAAAAAACAAG+GGG | - | chr7_4:24856317-24856336 | None:intergenic | 15.0% |
| !! | GAATGAAAAAAAAAAAACAA+GGG | - | chr7_4:24856318-24856337 | None:intergenic | 15.0% |
| !! | TGAATGAAAAAAAAAAAACA+AGG | - | chr7_4:24856319-24856338 | None:intergenic | 15.0% |
| !! | AATCAATTGTTCTGTAATTT+AGG | - | chr7_4:24853064-24853083 | None:intergenic | 20.0% |
| !! | TTTGTTTGGATTTAAATTTC+CGG | - | chr7_4:24853515-24853534 | None:intergenic | 20.0% |
| !!! | ATATTCATATCGTTTTTGTT+TGG | - | chr7_4:24853529-24853548 | None:intergenic | 20.0% |
| !!! | AAACGTTTTTAGTTTTTTAG+AGG | - | chr7_4:24853670-24853689 | None:intergenic | 20.0% |
| !! | TGAAGAAAATTGAAGAAAAA+AGG | + | chr7_4:24853689-24853708 | Msa1146800:intron | 20.0% |
| !! | GGTAAAATTGGAAAAAAATA+GGG | + | chr7_4:24854784-24854803 | Msa1146800:intron | 20.0% |
| !! | TGCAAAATGGAAATTAAATT+TGG | + | chr7_4:24855136-24855155 | Msa1146800:CDS | 20.0% |
| !!! | AAAAACCTTTTTATTGTTGT+TGG | - | chr7_4:24855954-24855973 | None:intergenic | 20.0% |
| ! | TAAGTATGATCTTGAAAAAG+TGG | - | chr7_4:24852673-24852692 | None:intergenic | 25.0% |
| !!! | ACATGATGTTACTTTGTATT+TGG | + | chr7_4:24852779-24852798 | Msa1146800:intron | 25.0% |
| ! | AATCAACGACATATCATAAA+TGG | + | chr7_4:24852949-24852968 | Msa1146800:intron | 25.0% |
| ! | ATCAACGACATATCATAAAT+GGG | + | chr7_4:24852950-24852969 | Msa1146800:intron | 25.0% |
| ! | AAACTTAGAGTTAAACCTAA+TGG | + | chr7_4:24853030-24853049 | Msa1146800:intron | 25.0% |
| ! | TTTGAAGAACATTTCTCTTT+AGG | + | chr7_4:24853133-24853152 | Msa1146800:intron | 25.0% |
| !!! | GTATTTTTGGAATTTTTGCA+GGG | - | chr7_4:24853237-24853256 | None:intergenic | 25.0% |
| ! | AAAAATTCCAAAAATACCCT+TGG | + | chr7_4:24853240-24853259 | Msa1146800:intron | 25.0% |
| ! | AAATAACTAACAATCTGGTT+CGG | - | chr7_4:24853281-24853300 | None:intergenic | 25.0% |
| ! | TATTTCCGGAAAATAAAATC+CGG | + | chr7_4:24853296-24853315 | Msa1146800:intron | 25.0% |
| !!! | TTTTAGTTTTTTATGGGTGT+CGG | - | chr7_4:24853453-24853472 | None:intergenic | 25.0% |
| !!! | TTTTAGTTTTTTAGAGGTGT+CGG | - | chr7_4:24853664-24853683 | None:intergenic | 25.0% |
| ! | AGGAGATTAGAAATAGATTT+AGG | + | chr7_4:24854516-24854535 | Msa1146800:intron | 25.0% |
| !!! | CTATTCTGGATTTTAAAATC+CGG | + | chr7_4:24854708-24854727 | Msa1146800:intron | 25.0% |
| ! | AGAATACTAACAATACATTC+CGG | + | chr7_4:24854741-24854760 | Msa1146800:intron | 25.0% |
| ! | GGGTAAAATTGGAAAAAAAT+AGG | + | chr7_4:24854783-24854802 | Msa1146800:intron | 25.0% |
| ! | TCTTGCCAATTTATTCAATT+TGG | + | chr7_4:24854943-24854962 | Msa1146800:intron | 25.0% |
| !! | TATTTTTCCACAAACTTTCT+TGG | - | chr7_4:24855071-24855090 | None:intergenic | 25.0% |
| ! | AGAAAGTTTGTGGAAAAATA+TGG | + | chr7_4:24855071-24855090 | Msa1146800:CDS | 25.0% |
| ! | TTAAATTTGGAAAAGAGTGA+TGG | + | chr7_4:24855149-24855168 | Msa1146800:CDS | 25.0% |
| ! | TGAAAAAACTTCCAAATTTG+AGG | + | chr7_4:24855253-24855272 | Msa1146800:CDS | 25.0% |
| ! | AAAGATTTGTACCTCAAATT+TGG | - | chr7_4:24855267-24855286 | None:intergenic | 25.0% |
| !! | AAATTTGAGGTACAAATCTT+TGG | + | chr7_4:24855266-24855285 | Msa1146800:CDS | 25.0% |
| !!! | TTTTATTTTCTGGAGTGTTA+AGG | + | chr7_4:24855613-24855632 | Msa1146800:intron | 25.0% |
| !!! | TTTATTTTCTGGAGTGTTAA+GGG | + | chr7_4:24855614-24855633 | Msa1146800:intron | 25.0% |
| !! | TGCAAAATTGGAACATTTTA+AGG | - | chr7_4:24855760-24855779 | None:intergenic | 25.0% |
| !! | TTAAAATGTTCCAATTTTGC+AGG | + | chr7_4:24855759-24855778 | Msa1146800:intron | 25.0% |
| ! | GTTAAAAAGATCATATCTAG+TGG | - | chr7_4:24855978-24855997 | None:intergenic | 25.0% |
| !! | CATTTCCATTTTCTATTGTT+TGG | + | chr7_4:24856343-24856362 | Msa1146800:intron | 25.0% |
| !!! | TTTGATTTGAATAAGAAGAG+AGG | + | chr7_4:24856399-24856418 | Msa1146800:CDS | 25.0% |
| ! | TCTAAAGATATGAACAATGA+AGG | - | chr7_4:24856601-24856620 | None:intergenic | 25.0% |
| ! | ATTGTTTAACATTTCAGAGT+AGG | + | chr7_4:24856643-24856662 | Msa1146800:CDS | 25.0% |
| ATGATCTTGAAAAAGTGGAT+TGG | - | chr7_4:24852668-24852687 | None:intergenic | 30.0% | |
| AATAACAGTAAAGGCTTACA+AGG | - | chr7_4:24852718-24852737 | None:intergenic | 30.0% | |
| !!! | GGTATTTTTGGAATTTTTGC+AGG | - | chr7_4:24853238-24853257 | None:intergenic | 30.0% |
| ! | ACCAGATTGTTAGTTATTTC+CGG | + | chr7_4:24853282-24853301 | Msa1146800:intron | 30.0% |
| AATAGTATTTCAGCTTGTGT+GGG | - | chr7_4:24853390-24853409 | None:intergenic | 30.0% | |
| TGCAGAAAATTGAAGAAAAG+AGG | + | chr7_4:24853478-24853497 | Msa1146800:intron | 30.0% | |
| AAAAAAGGTGAAGTGAAGAA+TGG | + | chr7_4:24853704-24853723 | Msa1146800:intron | 30.0% | |
| ! | TATAGCCTTAAACATGTCTT+AGG | + | chr7_4:24853755-24853774 | Msa1146800:intron | 30.0% |
| AATGACCTAAGACATGTTTA+AGG | - | chr7_4:24853763-24853782 | None:intergenic | 30.0% | |
| TGAAAGAGAGCCATTAATTT+GGG | - | chr7_4:24853829-24853848 | None:intergenic | 30.0% | |
| TTGAAAGAGAGCCATTAATT+TGG | - | chr7_4:24853830-24853849 | None:intergenic | 30.0% | |
| ! | TTAATCCGGAAAGTATATTC+CGG | + | chr7_4:24853945-24853964 | Msa1146800:intron | 30.0% |
| ATAAATGCAGTCAAAAAACG+TGG | - | chr7_4:24854080-24854099 | None:intergenic | 30.0% | |
| !!! | ACGTTTTTTGACTGCATTTA+TGG | + | chr7_4:24854079-24854098 | Msa1146800:intron | 30.0% |
| GCTCTTAGGAGATTAAAATT+AGG | + | chr7_4:24854488-24854507 | Msa1146800:intron | 30.0% | |
| GAGATTAAAATTAGGCTCTT+AGG | + | chr7_4:24854496-24854515 | Msa1146800:intron | 30.0% | |
| GTTCTGCTAAAATACTATTC+TGG | + | chr7_4:24854694-24854713 | Msa1146800:intron | 30.0% | |
| TAGTATTCTTCAGATGTTTC+CGG | - | chr7_4:24854730-24854749 | None:intergenic | 30.0% | |
| !!! | TTTTTTTCCAATTTTACCCC+TGG | - | chr7_4:24854782-24854801 | None:intergenic | 30.0% |
| ACTGGATGTATGTTTATTCT+GGG | - | chr7_4:24854855-24854874 | None:intergenic | 30.0% | |
| TACTGGATGTATGTTTATTC+TGG | - | chr7_4:24854856-24854875 | None:intergenic | 30.0% | |
| ! | TAAGTACCTGATGTGTATTT+TGG | + | chr7_4:24854878-24854897 | Msa1146800:intron | 30.0% |
| CAATTTATTCAATTTGGCCA+GGG | + | chr7_4:24854949-24854968 | Msa1146800:intron | 30.0% | |
| AATTTATTCAATTTGGCCAG+GGG | + | chr7_4:24854950-24854969 | Msa1146800:intron | 30.0% | |
| ! | TACATTACTTTAGGAAACAC+TGG | - | chr7_4:24854992-24855011 | None:intergenic | 30.0% |
| TTTGTGGAAAAATATGGAAG+AGG | + | chr7_4:24855077-24855096 | Msa1146800:CDS | 30.0% | |
| ! | GTCTTTAGACATATAGCTTT+TGG | - | chr7_4:24855107-24855126 | None:intergenic | 30.0% |
| ATATGTCTAAAGACTCCAAA+TGG | + | chr7_4:24855113-24855132 | Msa1146800:CDS | 30.0% | |
| ! | AATTTCCATTTTGCACCATT+TGG | - | chr7_4:24855131-24855150 | None:intergenic | 30.0% |
| CATATCTAAAAAGCAGAAGA+TGG | - | chr7_4:24855235-24855254 | None:intergenic | 30.0% | |
| ! | ACATTGTTGGTGAAATTCAA+AGG | - | chr7_4:24855420-24855439 | None:intergenic | 30.0% |
| TTTCACCAACAATGTGAAAT+TGG | + | chr7_4:24855425-24855444 | Msa1146800:CDS | 30.0% | |
| AGCATTACTTGTGTAAAACA+TGG | + | chr7_4:24855449-24855468 | Msa1146800:CDS | 30.0% | |
| CAAATTGATAGAATGTCCAA+AGG | + | chr7_4:24855497-24855516 | Msa1146800:CDS | 30.0% | |
| GACATAAAATCGTATACCTT+TGG | - | chr7_4:24855516-24855535 | None:intergenic | 30.0% | |
| GGTTGCTAAAAATTTAAGCA+TGG | - | chr7_4:24855713-24855732 | None:intergenic | 30.0% | |
| ATATTTGACGATAATCTTCG+AGG | - | chr7_4:24855734-24855753 | None:intergenic | 30.0% | |
| AGTAGCCAACAACAATAAAA+AGG | + | chr7_4:24855946-24855965 | Msa1146800:intron | 30.0% | |
| GTAATCACATGTGTCAATAT+CGG | - | chr7_4:24856051-24856070 | None:intergenic | 30.0% | |
| ! | ATCAATTTTACCGTGACAAT+TGG | - | chr7_4:24856155-24856174 | None:intergenic | 30.0% |
| !! | TTTTTGGTGATCAAAAGACT+GGG | - | chr7_4:24856280-24856299 | None:intergenic | 30.0% |
| !!! | ATTTTTGGTGATCAAAAGAC+TGG | - | chr7_4:24856281-24856300 | None:intergenic | 30.0% |
| TTCTGCCAAACAATAGAAAA+TGG | - | chr7_4:24856351-24856370 | None:intergenic | 30.0% | |
| AAAGTGTGTCTTACAAAACA+AGG | - | chr7_4:24856382-24856401 | None:intergenic | 30.0% | |
| !! | ATTAAACTTCAGGTGTTGAA+TGG | + | chr7_4:24856426-24856445 | Msa1146800:CDS | 30.0% |
| !! | TTAAACTTCAGGTGTTGAAT+GGG | + | chr7_4:24856427-24856446 | Msa1146800:CDS | 30.0% |
| CTAAAATTTGAACTCACAAG+TGG | + | chr7_4:24856495-24856514 | Msa1146800:CDS | 30.0% | |
| AAGGACAATAACTTGAAAGT+TGG | + | chr7_4:24856534-24856553 | Msa1146800:CDS | 30.0% | |
| ! | CCTTTTATCATGCCATCATA+AGG | - | chr7_4:24852855-24852874 | None:intergenic | 35.0% |
| CCTTATGATGGCATGATAAA+AGG | + | chr7_4:24852852-24852871 | Msa1146800:intron | 35.0% | |
| TCCGGAAATAACTAACAATC+TGG | - | chr7_4:24853286-24853305 | None:intergenic | 35.0% | |
| ! | ACAAAAAAGTGCACAACATC+TGG | - | chr7_4:24853323-24853342 | None:intergenic | 35.0% |
| TGTGTCTTTCTTTGATGTCA+AGG | + | chr7_4:24853340-24853359 | Msa1146800:intron | 35.0% | |
| GTGTCTTTCTTTGATGTCAA+GGG | + | chr7_4:24853341-24853360 | Msa1146800:intron | 35.0% | |
| ATAGTATTTCAGCTTGTGTG+GGG | - | chr7_4:24853389-24853408 | None:intergenic | 35.0% | |
| CAATAGTATTTCAGCTTGTG+TGG | - | chr7_4:24853391-24853410 | None:intergenic | 35.0% | |
| ACAAGCTGAAATACTATTGC+AGG | + | chr7_4:24853392-24853411 | Msa1146800:intron | 35.0% | |
| CAAGCTGAAATACTATTGCA+GGG | + | chr7_4:24853393-24853412 | Msa1146800:intron | 35.0% | |
| TATTGCAGGGTTCATATGAA+CGG | + | chr7_4:24853406-24853425 | Msa1146800:intron | 35.0% | |
| AAAAGAGGTGAAGAGATTTC+CGG | + | chr7_4:24853493-24853512 | Msa1146800:intron | 35.0% | |
| TGTGTCTTTCTTTGATGTCA+AGG | + | chr7_4:24853340-24853359 | Msa1146800:intron | 35.0% | |
| GTGTCTTTCTTTGATGTCAA+GGG | + | chr7_4:24853341-24853360 | Msa1146800:intron | 35.0% | |
| AATAGCATTTCAGCTTGTGT+GGG | - | chr7_4:24853601-24853620 | None:intergenic | 35.0% | |
| ! | ATGGACGTATTTGTTGAAGA+TGG | + | chr7_4:24853723-24853742 | Msa1146800:intron | 35.0% |
| ! | GCATTCCAGATTTTACATTC+CGG | + | chr7_4:24853867-24853886 | Msa1146800:intron | 35.0% |
| ACATTCCGGAATGTAAAATC+TGG | - | chr7_4:24853875-24853894 | None:intergenic | 35.0% | |
| TCACCATTATCGCATTAATC+CGG | + | chr7_4:24853931-24853950 | Msa1146800:intron | 35.0% | |
| TTTCCGGATTAATGCGATAA+TGG | - | chr7_4:24853937-24853956 | None:intergenic | 35.0% | |
| AAGTATATTCCGGAAACCAA+AGG | + | chr7_4:24853955-24853974 | Msa1146800:intron | 35.0% | |
| !! | GGTTTGGAAGGGTATTTATA+GGG | - | chr7_4:24854132-24854151 | None:intergenic | 35.0% |
| TATCTATGAAAGGCCAATGA+CGG | - | chr7_4:24854212-24854231 | None:intergenic | 35.0% | |
| !! | TCATTGGCCTTTCATAGATA+AGG | + | chr7_4:24854212-24854231 | Msa1146800:intron | 35.0% |
| !! | CATTGGCCTTTCATAGATAA+GGG | + | chr7_4:24854213-24854232 | Msa1146800:intron | 35.0% |
| ACTTTCAGGGTTTGTATGAA+CGG | + | chr7_4:24854247-24854266 | Msa1146800:intron | 35.0% | |
| CTTGGCTATTAGAGGAAAAT+CGG | - | chr7_4:24854434-24854453 | None:intergenic | 35.0% | |
| CCTGGCCAAATTGAATAAAT+TGG | - | chr7_4:24854951-24854970 | None:intergenic | 35.0% | |
| CCAATTTATTCAATTTGGCC+AGG | + | chr7_4:24854948-24854967 | Msa1146800:intron | 35.0% | |
| AAAAGAGTGATGGCAAGATA+TGG | + | chr7_4:24855159-24855178 | Msa1146800:CDS | 35.0% | |
| !! | AATCTTTGGAAAGAGTGCTT+TGG | + | chr7_4:24855280-24855299 | Msa1146800:CDS | 35.0% |
| GTTTATTTCCTTGACCATTG+GGG | - | chr7_4:24855346-24855365 | None:intergenic | 35.0% | |
| GGTTTATTTCCTTGACCATT+GGG | - | chr7_4:24855347-24855366 | None:intergenic | 35.0% | |
| AGGTTTATTTCCTTGACCAT+TGG | - | chr7_4:24855348-24855367 | None:intergenic | 35.0% | |
| ! | GCTCTATGATTTTCACCATT+CGG | - | chr7_4:24855371-24855390 | None:intergenic | 35.0% |
| TGCTTCCAATTTCACATTGT+TGG | - | chr7_4:24855433-24855452 | None:intergenic | 35.0% | |
| AAAACATGGAAAGTCGCAAA+AGG | + | chr7_4:24855463-24855482 | Msa1146800:CDS | 35.0% | |
| TATGTCTTCTTCATTGTGTC+AGG | + | chr7_4:24855530-24855549 | Msa1146800:intron | 35.0% | |
| !! | CACTTGTTTTCCTGCAAAAT+TGG | - | chr7_4:24855772-24855791 | None:intergenic | 35.0% |
| AATGTTTCTTTGCAGCTTAC+CGG | - | chr7_4:24855906-24855925 | None:intergenic | 35.0% | |
| GTAAGCTGCAAAGAAACATT+TGG | + | chr7_4:24855906-24855925 | Msa1146800:intron | 35.0% | |
| TGACAATTGGCTACATAATG+TGG | - | chr7_4:24856142-24856161 | None:intergenic | 35.0% | |
| CATTATGTAGCCAATTGTCA+CGG | + | chr7_4:24856142-24856161 | Msa1146800:intron | 35.0% | |
| TGTGTCTTACAAAACAAGGA+TGG | - | chr7_4:24856378-24856397 | None:intergenic | 35.0% | |
| GAGAGGAGATATTAAACTTC+AGG | + | chr7_4:24856416-24856435 | Msa1146800:CDS | 35.0% | |
| AATTTGAACTCACAAGTGGA+TGG | + | chr7_4:24856499-24856518 | Msa1146800:CDS | 35.0% | |
| ! | GTTTCCTTGGAGAAGGTTTT+GGG | - | chr7_4:24852696-24852715 | None:intergenic | 40.0% |
| TTACAAGGTTTCCTTGGAGA+AGG | - | chr7_4:24852703-24852722 | None:intergenic | 40.0% | |
| AAAGGCTTACAAGGTTTCCT+TGG | - | chr7_4:24852709-24852728 | None:intergenic | 40.0% | |
| ! | TGCCATCATAAGGTGTTCTT+GGG | - | chr7_4:24852845-24852864 | None:intergenic | 40.0% |
| ! | ATGCCATCATAAGGTGTTCT+TGG | - | chr7_4:24852846-24852865 | None:intergenic | 40.0% |
| AAGACTCAGATGACAAGGTA+AGG | - | chr7_4:24852984-24853003 | None:intergenic | 40.0% | |
| GTTGAAAGACTCAGATGACA+AGG | - | chr7_4:24852989-24853008 | None:intergenic | 40.0% | |
| ! | ATTTAGGAGTGCAGTCCATT+AGG | - | chr7_4:24853048-24853067 | None:intergenic | 40.0% |
| TCCCGGAGTTATCCATATTA+GGG | - | chr7_4:24853181-24853200 | None:intergenic | 40.0% | |
| ATCCCGGAGTTATCCATATT+AGG | - | chr7_4:24853182-24853201 | None:intergenic | 40.0% | |
| TTCCAAAAATACCCTTGGTC+CGG | + | chr7_4:24853245-24853264 | Msa1146800:intron | 40.0% | |
| GAAAACAAAATCCGGACCAA+GGG | - | chr7_4:24853259-24853278 | None:intergenic | 40.0% | |
| !! | CTGGTTCGGAAAACAAAATC+CGG | - | chr7_4:24853267-24853286 | None:intergenic | 40.0% |
| !!! | CTGGTCCGGATTTTATTTTC+CGG | - | chr7_4:24853304-24853323 | None:intergenic | 40.0% |
| CTTGTGTGGGGTTCATATAA+CGG | - | chr7_4:24853377-24853396 | None:intergenic | 40.0% | |
| !!! | TAGTTTTTTATGGGTGTCGG+TGG | - | chr7_4:24853450-24853469 | None:intergenic | 40.0% |
| CTTGTGTGGGGTTCATATAA+CGG | - | chr7_4:24853377-24853396 | None:intergenic | 40.0% | |
| ATAGCATTTCAGCTTGTGTG+GGG | - | chr7_4:24853600-24853619 | None:intergenic | 40.0% | |
| CAATAGCATTTCAGCTTGTG+TGG | - | chr7_4:24853602-24853621 | None:intergenic | 40.0% | |
| ACAAGCTGAAATGCTATTGC+AGG | + | chr7_4:24853603-24853622 | Msa1146800:intron | 40.0% | |
| CAAGCTGAAATGCTATTGCA+GGG | + | chr7_4:24853604-24853623 | Msa1146800:intron | 40.0% | |
| AATGCTATTGCAGGGTTCAT+AGG | + | chr7_4:24853612-24853631 | Msa1146800:intron | 40.0% | |
| TATTGCAGGGTTCATAGGAA+CGG | + | chr7_4:24853617-24853636 | Msa1146800:intron | 40.0% | |
| !!! | TAGTTTTTTAGAGGTGTCGG+TGG | - | chr7_4:24853661-24853680 | None:intergenic | 40.0% |
| AGTCAACGAAAACGTGTTAG+TGG | + | chr7_4:24853788-24853807 | Msa1146800:intron | 40.0% | |
| ACCGTCCAAACCCAAATTAA+TGG | + | chr7_4:24853816-24853835 | Msa1146800:intron | 40.0% | |
| ! | GCCATTAATTTGGGTTTGGA+CGG | - | chr7_4:24853820-24853839 | None:intergenic | 40.0% |
| ! | GAGAGCCATTAATTTGGGTT+TGG | - | chr7_4:24853824-24853843 | None:intergenic | 40.0% |
| ! | AATCTGGAATGCTTCAGCAT+TGG | - | chr7_4:24853859-24853878 | None:intergenic | 40.0% |
| ! | AATGCGATAATGGTGAACGA+GGG | - | chr7_4:24853927-24853946 | None:intergenic | 40.0% |
| ! | TAATGCGATAATGGTGAACG+AGG | - | chr7_4:24853928-24853947 | None:intergenic | 40.0% |
| GGTTTCCGGAATATACTTTC+CGG | - | chr7_4:24853953-24853972 | None:intergenic | 40.0% | |
| GCATTCCGGATTGTATATTC+CGG | + | chr7_4:24853979-24853998 | Msa1146800:intron | 40.0% | |
| GGGATGAGTGAAAAATGGTT+GGG | - | chr7_4:24854108-24854127 | None:intergenic | 40.0% | |
| AGGGATGAGTGAAAAATGGT+TGG | - | chr7_4:24854109-24854128 | None:intergenic | 40.0% | |
| !! | TGGAAGGGTATTTATAGGGA+GGG | - | chr7_4:24854128-24854147 | None:intergenic | 40.0% |
| !! | TTGGAAGGGTATTTATAGGG+AGG | - | chr7_4:24854129-24854148 | None:intergenic | 40.0% |
| !! | GGGTTTGGAAGGGTATTTAT+AGG | - | chr7_4:24854133-24854152 | None:intergenic | 40.0% |
| GTTGTAGAAGGAAGAAGATG+AGG | - | chr7_4:24854180-24854199 | None:intergenic | 40.0% | |
| TCTTCTTCCTTCTACAACCA+TGG | + | chr7_4:24854182-24854201 | Msa1146800:intron | 40.0% | |
| ACGAGACCCTTATCTATGAA+AGG | - | chr7_4:24854222-24854241 | None:intergenic | 40.0% | |
| GGTCTCGTTGAAAACTTTCA+GGG | + | chr7_4:24854234-24854253 | Msa1146800:intron | 40.0% | |
| GTTTGTATGAACGGTCAATG+AGG | + | chr7_4:24854256-24854275 | Msa1146800:intron | 40.0% | |
| TATTAGAGGAAAATCGGAGG+TGG | - | chr7_4:24854428-24854447 | None:intergenic | 40.0% | |
| TATGTCCTATCACATAGCAG+TGG | + | chr7_4:24854461-24854480 | Msa1146800:intron | 40.0% | |
| ACATTCCGGAATACGAAATC+CGG | + | chr7_4:24854755-24854774 | Msa1146800:intron | 40.0% | |
| CACATCAGGTACTTATCTAC+TGG | - | chr7_4:24854873-24854892 | None:intergenic | 40.0% | |
| GCTATGCCAAAATACACATC+AGG | - | chr7_4:24854887-24854906 | None:intergenic | 40.0% | |
| ! | AAAACACACCAGTTTGGGTT+GGG | - | chr7_4:24854909-24854928 | None:intergenic | 40.0% |
| TAAAACACACCAGTTTGGGT+TGG | - | chr7_4:24854910-24854929 | None:intergenic | 40.0% | |
| ! | AACCCAAACTGGTGTGTTTT+AGG | + | chr7_4:24854909-24854928 | Msa1146800:intron | 40.0% |
| AGCCTAAAACACACCAGTTT+GGG | - | chr7_4:24854914-24854933 | None:intergenic | 40.0% | |
| TAGCCTAAAACACACCAGTT+TGG | - | chr7_4:24854915-24854934 | None:intergenic | 40.0% | |
| GATGATGCCAAGAAAGTTTG+TGG | + | chr7_4:24855061-24855080 | Msa1146800:intron | 40.0% | |
| AGACTCCAAATGGTGCAAAA+TGG | + | chr7_4:24855123-24855142 | Msa1146800:CDS | 40.0% | |
| TGGCAAGATATGGTTTGAGA+AGG | + | chr7_4:24855169-24855188 | Msa1146800:CDS | 40.0% | |
| GGCAAGATATGGTTTGAGAA+GGG | + | chr7_4:24855170-24855189 | Msa1146800:CDS | 40.0% | |
| AGATATGGTTTGAGAAGGGT+TGG | + | chr7_4:24855174-24855193 | Msa1146800:CDS | 40.0% | |
| CAAAAGAGTTGAAGCTCAGA+AGG | + | chr7_4:24855319-24855338 | Msa1146800:CDS | 40.0% | |
| CAAGGAAATAAACCTCCGAA+TGG | + | chr7_4:24855353-24855372 | Msa1146800:CDS | 40.0% | |
| ! | CTATGATTTTCACCATTCGG+AGG | - | chr7_4:24855368-24855387 | None:intergenic | 40.0% |
| CTCATGACAACAACAAAGGA+TGG | - | chr7_4:24855855-24855874 | None:intergenic | 40.0% | |
| TGCACTCATGACAACAACAA+AGG | - | chr7_4:24855859-24855878 | None:intergenic | 40.0% | |
| ACATGTGTCAATATCGGACA+CGG | - | chr7_4:24856045-24856064 | None:intergenic | 40.0% | |
| GGTCTGCTAGATATTCTATC+AGG | + | chr7_4:24856457-24856476 | Msa1146800:CDS | 40.0% | |
| CTTACCCAAAACCTTCTCCA+AGG | + | chr7_4:24852689-24852708 | Msa1146800:CDS | 45.0% | |
| ! | GGTTTCCTTGGAGAAGGTTT+TGG | - | chr7_4:24852697-24852716 | None:intergenic | 45.0% |
| GTCCCAAGAACACCTTATGA+TGG | + | chr7_4:24852840-24852859 | Msa1146800:intron | 45.0% | |
| CTCAGATGACAAGGTAAGGT+AGG | - | chr7_4:24852980-24852999 | None:intergenic | 45.0% | |
| AATAAGGCCGAGTGAGACAA+CGG | - | chr7_4:24853101-24853120 | None:intergenic | 45.0% | |
| AGGCCCCAGAAATATCTCTA+AGG | + | chr7_4:24853153-24853172 | Msa1146800:intron | 45.0% | |
| ! | GGGCCTTAGAGATATTTCTG+GGG | - | chr7_4:24853159-24853178 | None:intergenic | 45.0% |
| GGGGCCTTAGAGATATTTCT+GGG | - | chr7_4:24853160-24853179 | None:intergenic | 45.0% | |
| !! | ATCTCTAAGGCCCCCTAATA+TGG | + | chr7_4:24853166-24853185 | Msa1146800:intron | 45.0% |
| CCGGAGTTATCCATATTAGG+GGG | - | chr7_4:24853179-24853198 | None:intergenic | 45.0% | |
| CCCCCTAATATGGATAACTC+CGG | + | chr7_4:24853176-24853195 | Msa1146800:intron | 45.0% | |
| CCCGGAGTTATCCATATTAG+GGG | - | chr7_4:24853180-24853199 | None:intergenic | 45.0% | |
| CCCCTAATATGGATAACTCC+GGG | + | chr7_4:24853177-24853196 | Msa1146800:intron | 45.0% | |
| GGGGTGGAAAAAGTAAATCC+CGG | - | chr7_4:24853198-24853217 | None:intergenic | 45.0% | |
| !!! | ATCCGGACCAAGGGTATTTT+TGG | - | chr7_4:24853250-24853269 | None:intergenic | 45.0% |
| GGAAAACAAAATCCGGACCA+AGG | - | chr7_4:24853260-24853279 | None:intergenic | 45.0% | |
| AAAGTGCACAACATCTGGTC+CGG | - | chr7_4:24853318-24853337 | None:intergenic | 45.0% | |
| GAAAGTTGGCACTTCCTGTA+GGG | - | chr7_4:24853904-24853923 | None:intergenic | 45.0% | |
| ! | ATGCGATAATGGTGAACGAG+GGG | - | chr7_4:24853926-24853945 | None:intergenic | 45.0% |
| TACAATCCGGAATGCACCTT+TGG | - | chr7_4:24853974-24853993 | None:intergenic | 45.0% | |
| GCGTTCCGGAATATACAATC+CGG | - | chr7_4:24853987-24854006 | None:intergenic | 45.0% | |
| ACCACTGTCAAAAACGTGTG+GGG | - | chr7_4:24854034-24854053 | None:intergenic | 45.0% | |
| GACCACTGTCAAAAACGTGT+GGG | - | chr7_4:24854035-24854054 | None:intergenic | 45.0% | |
| TGACCACTGTCAAAAACGTG+TGG | - | chr7_4:24854036-24854055 | None:intergenic | 45.0% | |
| AGGGAGGGATGAGTGAAAAA+TGG | - | chr7_4:24854113-24854132 | None:intergenic | 45.0% | |
| ! | AGAAATGGTGGGGTTTGGAA+GGG | - | chr7_4:24854143-24854162 | None:intergenic | 45.0% |
| GAAGGAAGAAGATGAGGAGA+GGG | - | chr7_4:24854174-24854193 | None:intergenic | 45.0% | |
| AGAAGGAAGAAGATGAGGAG+AGG | - | chr7_4:24854175-24854194 | None:intergenic | 45.0% | |
| CGGAAAACCATGGTTGTAGA+AGG | - | chr7_4:24854192-24854211 | None:intergenic | 45.0% | |
| ! | CAACCATGGTTTTCCGTCAT+TGG | + | chr7_4:24854196-24854215 | Msa1146800:intron | 45.0% |
| GGGTCTCGTTGAAAACTTTC+AGG | + | chr7_4:24854233-24854252 | Msa1146800:intron | 45.0% | |
| GTATGAACGGTCAATGAGGA+TGG | + | chr7_4:24854260-24854279 | Msa1146800:intron | 45.0% | |
| GTTCTTAGTTTCGCCTGTCT+GGG | + | chr7_4:24854335-24854354 | Msa1146800:intron | 45.0% | |
| GAAGAAACAAATGCCCCTGA+GGG | - | chr7_4:24854385-24854404 | None:intergenic | 45.0% | |
| AGAAGAAACAAATGCCCCTG+AGG | - | chr7_4:24854386-24854405 | None:intergenic | 45.0% | |
| GGCTATTAGAGGAAAATCGG+AGG | - | chr7_4:24854431-24854450 | None:intergenic | 45.0% | |
| AGCAGTAGCTTGGCTATTAG+AGG | - | chr7_4:24854442-24854461 | None:intergenic | 45.0% | |
| GATAGGACATAGCAGTAGCT+TGG | - | chr7_4:24854452-24854471 | None:intergenic | 45.0% | |
| CCTAACCACTGCTATGTGAT+AGG | - | chr7_4:24854469-24854488 | None:intergenic | 45.0% | |
| CCTATCACATAGCAGTGGTT+AGG | + | chr7_4:24854466-24854485 | Msa1146800:intron | 45.0% | |
| ATAGCAGTGGTTAGGCTCTT+AGG | + | chr7_4:24854474-24854493 | Msa1146800:intron | 45.0% | |
| ! | TTCCAATTTTACCCCTGGTC+CGG | - | chr7_4:24854777-24854796 | None:intergenic | 45.0% |
| ! | TTTGCAGAGCATCACTCTCT+AGG | + | chr7_4:24855203-24855222 | Msa1146800:CDS | 45.0% |
| ACATGGAAAGTCGCAAAAGG+TGG | + | chr7_4:24855466-24855485 | Msa1146800:CDS | 45.0% | |
| CGTTGAACACCACTTTCTTC+CGG | + | chr7_4:24855884-24855903 | Msa1146800:CDS | 45.0% | |
| ACACGGACATGTCTCTAACA+AGG | - | chr7_4:24856028-24856047 | None:intergenic | 45.0% | |
| !! | AGGTGTTGAATGGGAGAGTT+TGG | + | chr7_4:24856436-24856455 | Msa1146800:CDS | 45.0% |
| TCTATCAGGATGTGCGCTAA+AGG | + | chr7_4:24856471-24856490 | Msa1146800:CDS | 45.0% | |
| TGAACTCACAAGTGGATGGA+AGG | + | chr7_4:24856503-24856522 | Msa1146800:CDS | 45.0% | |
| !! | TGGATGGAAGGCATTTGCAA+AGG | + | chr7_4:24856515-24856534 | Msa1146800:CDS | 45.0% |
| !! | TTAATTAATTGAAATATTAT+AGG | + | chr7_4:24856215-24856234 | Msa1146800:intron | 5.0% |
| ATAAGGCCGAGTGAGACAAC+GGG | - | chr7_4:24853100-24853119 | None:intergenic | 50.0% | |
| GGGGGCCTTAGAGATATTTC+TGG | - | chr7_4:24853161-24853180 | None:intergenic | 50.0% | |
| CTGTAGGGCTAAGGACATTC+CGG | - | chr7_4:24853889-24853908 | None:intergenic | 50.0% | |
| GGAAAGTTGGCACTTCCTGT+AGG | - | chr7_4:24853905-24853924 | None:intergenic | 50.0% | |
| ATGGTGAACGAGGGGAAAGT+TGG | - | chr7_4:24853918-24853937 | None:intergenic | 50.0% | |
| ! | CGGAATGCACCTTTGGTTTC+CGG | - | chr7_4:24853967-24853986 | None:intergenic | 50.0% |
| ! | CGGAAACCAAAGGTGCATTC+CGG | + | chr7_4:24853965-24853984 | Msa1146800:intron | 50.0% |
| ! | GAGAAATGGTGGGGTTTGGA+AGG | - | chr7_4:24854144-24854163 | None:intergenic | 50.0% |
| ! | GTGTGAGAAATGGTGGGGTT+TGG | - | chr7_4:24854148-24854167 | None:intergenic | 50.0% |
| GGATGGTGTGAGAAATGGTG+GGG | - | chr7_4:24854153-24854172 | None:intergenic | 50.0% | |
| GGGATGGTGTGAGAAATGGT+GGG | - | chr7_4:24854154-24854173 | None:intergenic | 50.0% | |
| AGGGATGGTGTGAGAAATGG+TGG | - | chr7_4:24854155-24854174 | None:intergenic | 50.0% | |
| GAGAGGGATGGTGTGAGAAA+TGG | - | chr7_4:24854158-24854177 | None:intergenic | 50.0% | |
| GAAGAAGATGAGGAGAGGGA+TGG | - | chr7_4:24854170-24854189 | None:intergenic | 50.0% | |
| ! | AGGCCAATGACGGAAAACCA+TGG | - | chr7_4:24854202-24854221 | None:intergenic | 50.0% |
| GGTTCATCTGAGGGTCATGT+GGG | + | chr7_4:24854304-24854323 | Msa1146800:intron | 50.0% | |
| GGTTCTTAGTTTCGCCTGTC+TGG | + | chr7_4:24854334-24854353 | Msa1146800:intron | 50.0% | |
| AGAGGAAAATCGGAGGTGGA+GGG | - | chr7_4:24854424-24854443 | None:intergenic | 50.0% | |
| TAGAGGAAAATCGGAGGTGG+AGG | - | chr7_4:24854425-24854444 | None:intergenic | 50.0% | |
| CTGGTCCGGATTTCGTATTC+CGG | - | chr7_4:24854763-24854782 | None:intergenic | 50.0% | |
| GGAATACGAAATCCGGACCA+GGG | + | chr7_4:24854762-24854781 | Msa1146800:intron | 50.0% | |
| GAATACGAAATCCGGACCAG+GGG | + | chr7_4:24854763-24854782 | Msa1146800:intron | 50.0% | |
| ATCCGGACCAGGGGTAAAAT+TGG | + | chr7_4:24854772-24854791 | Msa1146800:intron | 50.0% | |
| TTTGGCCAGGGGAATTTGTG+TGG | + | chr7_4:24854961-24854980 | Msa1146800:intron | 50.0% | |
| GAGCATCACTCTCTAGGTCA+TGG | + | chr7_4:24855209-24855228 | Msa1146800:CDS | 50.0% | |
| TGCAGCTTACCGGAAGAAAG+TGG | - | chr7_4:24855896-24855915 | None:intergenic | 50.0% | |
| GTCCATCCCGTTGTCTCACT+CGG | + | chr7_4:24853091-24853110 | Msa1146800:intron | 55.0% | |
| !! | TATGGGTGTCGGTGGTGTCA+TGG | - | chr7_4:24853442-24853461 | None:intergenic | 55.0% |
| CGGAATGTCCTTAGCCCTAC+AGG | + | chr7_4:24853887-24853906 | Msa1146800:intron | 55.0% | |
| TGGCACTTCCTGTAGGGCTA+AGG | - | chr7_4:24853898-24853917 | None:intergenic | 55.0% | |
| TCCGGAACGCATCAGTGTCA+TGG | + | chr7_4:24853997-24854016 | Msa1146800:intron | 55.0% | |
| GCCATGACACTGATGCGTTC+CGG | - | chr7_4:24854001-24854020 | None:intergenic | 55.0% | |
| GAACGCATCAGTGTCATGGC+CGG | + | chr7_4:24854001-24854020 | Msa1146800:intron | 55.0% | |
| ! | GCCCCACACGTTTTTGACAG+TGG | + | chr7_4:24854030-24854049 | Msa1146800:intron | 55.0% |
| AACGAAGGGCGGTTCATCTG+AGG | + | chr7_4:24854294-24854313 | Msa1146800:intron | 55.0% | |
| ACGAAGGGCGGTTCATCTGA+GGG | + | chr7_4:24854295-24854314 | Msa1146800:intron | 55.0% | |
| CGGTTCATCTGAGGGTCATG+TGG | + | chr7_4:24854303-24854322 | Msa1146800:intron | 55.0% | |
| AAATGCCCCTGAGGGATGTG+GGG | - | chr7_4:24854377-24854396 | None:intergenic | 55.0% | |
| CAAATGCCCCTGAGGGATGT+GGG | - | chr7_4:24854378-24854397 | None:intergenic | 55.0% | |
| ACAAATGCCCCTGAGGGATG+TGG | - | chr7_4:24854379-24854398 | None:intergenic | 55.0% | |
| AAATCGGAGGTGGAGGGAAG+AGG | - | chr7_4:24854418-24854437 | None:intergenic | 55.0% | |
| CGGAATACGAAATCCGGACC+AGG | + | chr7_4:24854761-24854780 | Msa1146800:intron | 55.0% | |
| GGAAAAAAATAGGGCGCGCG+AGG | + | chr7_4:24854793-24854812 | Msa1146800:intron | 55.0% | |
| CGCGAGGAAAGACATAGGGT+GGG | + | chr7_4:24854809-24854828 | Msa1146800:intron | 55.0% | |
| TGGCATAGCCCAACCCAAAC+TGG | + | chr7_4:24854898-24854917 | Msa1146800:intron | 55.0% | |
| CAGCTCCACACAAATTCCCC+TGG | - | chr7_4:24854969-24854988 | None:intergenic | 55.0% | |
| GAAGCTCAGAAGGTCCCCAA+TGG | + | chr7_4:24855329-24855348 | Msa1146800:CDS | 55.0% | |
| CAGAAGGTCCCCAATGGTCA+AGG | + | chr7_4:24855335-24855354 | Msa1146800:CDS | 55.0% | |
| ! | TTTTTGCAGGGCGCGCGAGA+AGG | - | chr7_4:24853225-24853244 | None:intergenic | 60.0% |
| AAACGTGTGGGGCAGACCAC+CGG | - | chr7_4:24854023-24854042 | None:intergenic | 60.0% | |
| ATGGAACCGCGCTGCAACGA+AGG | + | chr7_4:24854279-24854298 | Msa1146800:intron | 60.0% | |
| TGGAACCGCGCTGCAACGAA+GGG | + | chr7_4:24854280-24854299 | Msa1146800:intron | 60.0% | |
| GAGGGTCATGTGGGTCAGTG+TGG | + | chr7_4:24854313-24854332 | Msa1146800:intron | 60.0% | |
| GCTCAGACTTACGCCCAGAC+AGG | - | chr7_4:24854351-24854370 | None:intergenic | 60.0% | |
| AATGCCCCTGAGGGATGTGG+GGG | - | chr7_4:24854376-24854395 | None:intergenic | 60.0% | |
| GGCGCGCGAGGAAAGACATA+GGG | + | chr7_4:24854805-24854824 | Msa1146800:intron | 60.0% | |
| GCGCGAGGAAAGACATAGGG+TGG | + | chr7_4:24854808-24854827 | Msa1146800:intron | 60.0% | |
| GGCCGAGTGAGACAACGGGA+TGG | - | chr7_4:24853096-24853115 | None:intergenic | 65.0% | |
| CGCATCAGTGTCATGGCCGG+TGG | + | chr7_4:24854004-24854023 | Msa1146800:intron | 65.0% | |
| AACCGCGCTGCAACGAAGGG+CGG | + | chr7_4:24854283-24854302 | Msa1146800:intron | 65.0% | |
| AACCGCCCTTCGTTGCAGCG+CGG | - | chr7_4:24854288-24854307 | None:intergenic | 65.0% | |
| AGCACCCCCCACATCCCTCA+GGG | + | chr7_4:24854368-24854387 | Msa1146800:intron | 65.0% | |
| ATGCCCCTGAGGGATGTGGG+GGG | - | chr7_4:24854375-24854394 | None:intergenic | 65.0% | |
| AGGTGGAGGGAAGAGGAGGG+CGG | - | chr7_4:24854411-24854430 | None:intergenic | 65.0% | |
| CGGAGGTGGAGGGAAGAGGA+GGG | - | chr7_4:24854414-24854433 | None:intergenic | 65.0% | |
| TCGGAGGTGGAGGGAAGAGG+AGG | - | chr7_4:24854415-24854434 | None:intergenic | 65.0% | |
| GGGCGCGCGAGGAAAGACAT+AGG | + | chr7_4:24854804-24854823 | Msa1146800:intron | 65.0% | |
| AGGGCGCGCGAGAAGGCAGT+GGG | - | chr7_4:24853218-24853237 | None:intergenic | 70.0% | |
| GAGCACCCCCCACATCCCTC+AGG | + | chr7_4:24854367-24854386 | Msa1146800:intron | 70.0% | |
| GCACCCCCCACATCCCTCAG+GGG | + | chr7_4:24854369-24854388 | Msa1146800:intron | 70.0% | |
| GGTGGAGGGAAGAGGAGGGC+GGG | - | chr7_4:24854410-24854429 | None:intergenic | 70.0% | |
| CGCGCGAGAAGGCAGTGGGG+TGG | - | chr7_4:24853214-24853233 | None:intergenic | 75.0% | |
| GGGCGCGCGAGAAGGCAGTG+GGG | - | chr7_4:24853217-24853236 | None:intergenic | 75.0% | |
| CAGGGCGCGCGAGAAGGCAG+TGG | - | chr7_4:24853219-24853238 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 24852638 | 24856674 | 24852638 | ID=Msa1146800;Name=Msa1146800 |
| chr7_4 | mRNA | 24852638 | 24856674 | 24852638 | ID=Msa1146800-mRNA-1;Parent=Msa1146800;Name=Msa1146800-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|0.66|0.75|4|0|322 |
| chr7_4 | exon | 24852638 | 24852718 | 24852638 | ID=Msa1146800-mRNA-1:exon:6157;Parent=Msa1146800-mRNA-1 |
| chr7_4 | exon | 24855062 | 24855518 | 24855062 | ID=Msa1146800-mRNA-1:exon:6158;Parent=Msa1146800-mRNA-1 |
| chr7_4 | exon | 24855781 | 24855905 | 24855781 | ID=Msa1146800-mRNA-1:exon:6159;Parent=Msa1146800-mRNA-1 |
| chr7_4 | exon | 24856369 | 24856674 | 24856369 | ID=Msa1146800-mRNA-1:exon:6160;Parent=Msa1146800-mRNA-1 |
| chr7_4 | CDS | 24852638 | 24852718 | 24852638 | ID=Msa1146800-mRNA-1:cds;Parent=Msa1146800-mRNA-1 |
| chr7_4 | CDS | 24855062 | 24855518 | 24855062 | ID=Msa1146800-mRNA-1:cds;Parent=Msa1146800-mRNA-1 |
| chr7_4 | CDS | 24855781 | 24855905 | 24855781 | ID=Msa1146800-mRNA-1:cds;Parent=Msa1146800-mRNA-1 |
| chr7_4 | CDS | 24856369 | 24856674 | 24856369 | ID=Msa1146800-mRNA-1:cds;Parent=Msa1146800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
